TCONS_00044754 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044754
Unique NameTCONS_00044754
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length425

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044754 ID=TCONS_00044754|Name=TCONS_00044754|organism=Clytia hemisphaerica|type=transcript|length=425bp
TTCACTAAAGAAACATGTTTTATCGTAAACAACATTATCGAATCCGTATA
AGCTAGCTGTCTGACTCTTGATTACCTATGTTAGAGCTTTAACATATGCA
CACAtttaaattttgtaattttcatacAGATAATGGCCTAACTAAAATCG
TATGCATTGTTATGACAAACCTCAAGCCGAAGTTCTTGTTTGGTTTTCAT
CAAACGTTCTTTCTTTGTTGTTTTCGTGTTTTGTTTATACGGAGCGACCT
CCTCTCCATCACTGAGTGTACTACTTTTCTCCTCCTGTGTGCTTTCAGTT
GCTTCATCACTAGATGAAAATTGTGGCTCTTTCAAAATACTTTCCCTCAT
TCTTTCGTAAAGTTTCGCATTTTCTTCTGCGATGAGATTGGAGCGAGTTT
GTAAATTCGATAACGCGTCCttaaa
Run BLAST on NCBI

transcript from alignment at sc0006146:577..1001

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044754 ID=TCONS_00044754|Name=TCONS_00044754|organism=Clytia hemisphaerica|type=transcript|length=425bp|location=Sequence derived from alignment at sc0006146:577..1001 (Clytia hemisphaerica)
tttaaGGACGCGTTATCGAATTTACAAACTCGCTCCAATCTCATCGCAGA
AGAAAATGCGAAACTTTACGAAAGAATGAGGGAAAGTATTTTGAAAGAGC
CACAATTTTCATCTAGTGATGAAGCAACTGAAAGCACACAGGAGGAGAAA
AGTAGTACACTCAGTGATGGAGAGGAGGTCGCTCCGTATAAACAAAACAC
GAAAACAACAAAGAAAGAACGTTTGATGAAAACCAAACAAGAACTTCGGC
TTGAGGTTTGTCATAACAATGCATACGATTTTAGTTAGGCCATTATCTgt
atgaaaattacaaaatttaaaTGTGTGCATATGTTAAAGCTCTAACATAG
GTAATCAAGAGTCAGACAGCTAGCTTATACGGATTCGATAATGTTGTTTA
CGATAAAACATGTTTCTTTAGTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028366XLOC_028366Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044754-exon-sc0006146-1491911889:577..1001TCONS_00044754-exon-sc0006146-1491911889:577..1001Clytia hemisphaericaexon
TCONS_00044754-exon-sc0006146-1510915933:577..1001TCONS_00044754-exon-sc0006146-1510915933:577..1001Clytia hemisphaericaexon
TCONS_00044754-exon-sc0006146-1575043694:577..1001TCONS_00044754-exon-sc0006146-1575043694:577..1001Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0006146supercontigsc0006146:577..1001 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.22845	0.78195	1.22316	0.810689	0.906292	1.59161	0.651818	0.203143	2.92122	2.47427	2.32968	1.25286	2.37723	2.69718	0.977491	0.516243	1.29734	2.50366	1.62862	2.70907	0.524722	1.16189	0.435401	2.0205	8.23831	4.00565	0.24118	0	0.434532	0.673423
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044754 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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