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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044801 ID=TCONS_00044801|Name=TCONS_00044801|organism=Clytia hemisphaerica|type=transcript|length=2205bp
GCTTCATTCGTTATGCTTCAAGAACAACCTTCAATTGTAGACGAAAGTGA
TCTTCCGGAAGAAGGTGACCTACCAACAGTCAAATCTTTCACCAGGACAC
AAACGATTACAACAGAAGATACTGAACCAGCCGAAGAACAACCACTACAA
AGTGCTTCATTCGTTATGCTCCAAGAACAATCTTTAGCTGTTGACGAAAG
TGATCTTCCGAAAGAAGGTGACCTACCAACAGTCAAATCTTTCACCAGAA
CACAAACAATTACAACAGAAGATACTGAACCAGTCGAAGAACAACCACTA
CAAAGTGCTTCATTCGTTATGCTTCAAGAACAACCTTCAATTGTAGACGA
AAGTGATCTTCCGGAAGAAGGCGACCTTCCAACAGTCAAATCTTTCACCA
GAACACAAATGATTACAACAGAAGATACTGAACCAGTGGAAGAACAACCA
CTACAAAGTGCTTCATTCGTTATGCTTCAAGAACAACCTTCAATTGTAGA
CGAAAGTGATCTTCCTGAAGAAGGTGACCTACCAACAGTCAAATCTTTCA
CCAGGACACAAACAATTACAACAAAGGATACTGAACCACTCAAAGAACAA
CCACTACAAAGTGCTTCTTTTGTCGCGCTTCAAGAACAACCTTCAATTGT
TGACGAAAGTGATCTTCCGGAAGAAGGCGACCTACCAACAGCCAAATCTT
TCACCAGAACACAGACAATTATAACAGAAGATACTGAACCAGCCGAAGAA
CAACCACTACAAAGTGCTTCCTTTGTCGTGCTTCAAGAACAACCTTCAGC
TGTTGACGAAAGTGATCTTCCGGAAGAAGGTGACCTACCAACAGTCAAAT
CTTTCACCAGAACACAGACAATTACAACAGAAGATACTGAACCAGTGGAA
GAAGAACCACTACAAAGTGCTTCTTTTGTCGTGCTTCAAGAACAACCTTC
AATTGTTGACAAAAGTGATCTTCCGAAAGAAGGTGACCTACCAACAGTCA
AATCTTTCACCAGGACACAAACAATTACAACAGAGGATACTGAACCACTC
AAAGAACAACCACTACAAAGTGCTTCTTTTGTCGTGCTTCAAGAACAACC
TTCAATTGTAGACGAAAGTGATCTTCCNTTCTTTTGTCGTGCTTCAAGAA
CAACCTTCAATTGTTGACGAAAGTGATCTTCCGGAAGAAGGCGACCTACC
AACAGCCAAATCTTTCACCAGGACACAAACAATTACAACAGAGGATACTG
AACCACTCAAAGAACAACCACTACAAAGTGTTTCTTTTGTCGTGCTTCAA
GAACAACCTTCAATTGTAGACGAAAGTGATCTTCCGGAAGAAGGTGACCT
ACCAACAGCCAAATCTTTCACCAGAACACAAACAATTACAACGGAagata
ctaaaccagtcaaagAACAACCACTACAAAGTGCTTCATTCGTTATGCTT
CAAGAACAATCTTTAGCTGTTGACGAAAGTGATCTTCCGAAAGAAGGTGA
CCTACCAACAGTCAAATCTTTCACCAGAACACAAACAATTACAACAGAAG
ATATTGAACCAGCCGAAGAACAACCACTACAAAGTGCTTCATTCGTTATG
CTTCAAGAACAACCTTCAATTGTTGACGAAAGTGATTTTCCTGAAGAAGG
TGACCTACCAACAGTCAAATCTTTCACCAGAACACAGACAATTATAACAG
AAGATACTGAACCAGTCGAAGAACAACCACTACAAAGTGCTTCATTCGTT
ATGCTTCAAGAACAACCTTCAATTGTAGACGAAAGTGATCTTCCAGAAGA
AGGTGACCTACCAACAGTCAAATCTTTCACCAGAACACAAACAATTACAA
CGGAAGATACTNACCAACAGTCAAATCTTTCACCAGAACACAAACAATTA
CAACGGAAGATACTGAACCAGCCGAAGAACAACCACTACAAAGTGCTTCA
TTCGTTATGCTTCAAGAACAACCTTCAATTGTTGACGAAAGTGATTTTCC
TGAAGAAGGTGACCTACCAACAGTCAAATCTTTCACCAGGACACAAACAA
TTACAACAGAAGATACTGAACCAGTCGAAGAACAACCACTACAAAGTGCT
TCATTCGTTATGCATCAAGAACAACCTTCAATTGTAGACGAAAGTGATCT
TCCAGAAGAAGGTGACCTACCAACAGTCAAATCTTTCACCAGAACACAAA
CAATT Run BLAST on NCBI transcript from alignment at sc0006241:1..2205+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044801 ID=TCONS_00044801|Name=TCONS_00044801|organism=Clytia hemisphaerica|type=transcript|length=2205bp|location=Sequence derived from alignment at sc0006241:1..2205+ (Clytia hemisphaerica)
GCTTCATTCGTTATGCTTCAAGAACAACCTTCAATTGTAGACGAAAGTGA
TCTTCCGGAAGAAGGTGACCTACCAACAGTCAAATCTTTCACCAGGACAC
AAACGATTACAACAGAAGATACTGAACCAGCCGAAGAACAACCACTACAA
AGTGCTTCATTCGTTATGCTCCAAGAACAATCTTTAGCTGTTGACGAAAG
TGATCTTCCGAAAGAAGGTGACCTACCAACAGTCAAATCTTTCACCAGAA
CACAAACAATTACAACAGAAGATACTGAACCAGTCGAAGAACAACCACTA
CAAAGTGCTTCATTCGTTATGCTTCAAGAACAACCTTCAATTGTAGACGA
AAGTGATCTTCCGGAAGAAGGCGACCTTCCAACAGTCAAATCTTTCACCA
GAACACAAATGATTACAACAGAAGATACTGAACCAGTGGAAGAACAACCA
CTACAAAGTGCTTCATTCGTTATGCTTCAAGAACAACCTTCAATTGTAGA
CGAAAGTGATCTTCCTGAAGAAGGTGACCTACCAACAGTCAAATCTTTCA
CCAGGACACAAACAATTACAACAAAGGATACTGAACCACTCAAAGAACAA
CCACTACAAAGTGCTTCTTTTGTCGCGCTTCAAGAACAACCTTCAATTGT
TGACGAAAGTGATCTTCCGGAAGAAGGCGACCTACCAACAGCCAAATCTT
TCACCAGAACACAGACAATTATAACAGAAGATACTGAACCAGCCGAAGAA
CAACCACTACAAAGTGCTTCCTTTGTCGTGCTTCAAGAACAACCTTCAGC
TGTTGACGAAAGTGATCTTCCGGAAGAAGGTGACCTACCAACAGTCAAAT
CTTTCACCAGAACACAGACAATTACAACAGAAGATACTGAACCAGTGGAA
GAAGAACCACTACAAAGTGCTTCTTTTGTCGTGCTTCAAGAACAACCTTC
AATTGTTGACAAAAGTGATCTTCCGAAAGAAGGTGACCTACCAACAGTCA
AATCTTTCACCAGGACACAAACAATTACAACAGAGGATACTGAACCACTC
AAAGAACAACCACTACAAAGTGCTTCTTTTGTCGTGCTTCAAGAACAACC
TTCAATTGTAGACGAAAGTGATCTTCCNTTCTTTTGTCGTGCTTCAAGAA
CAACCTTCAATTGTTGACGAAAGTGATCTTCCGGAAGAAGGCGACCTACC
AACAGCCAAATCTTTCACCAGGACACAAACAATTACAACAGAGGATACTG
AACCACTCAAAGAACAACCACTACAAAGTGTTTCTTTTGTCGTGCTTCAA
GAACAACCTTCAATTGTAGACGAAAGTGATCTTCCGGAAGAAGGTGACCT
ACCAACAGCCAAATCTTTCACCAGAACACAAACAATTACAACGGAagata
ctaaaccagtcaaagAACAACCACTACAAAGTGCTTCATTCGTTATGCTT
CAAGAACAATCTTTAGCTGTTGACGAAAGTGATCTTCCGAAAGAAGGTGA
CCTACCAACAGTCAAATCTTTCACCAGAACACAAACAATTACAACAGAAG
ATATTGAACCAGCCGAAGAACAACCACTACAAAGTGCTTCATTCGTTATG
CTTCAAGAACAACCTTCAATTGTTGACGAAAGTGATTTTCCTGAAGAAGG
TGACCTACCAACAGTCAAATCTTTCACCAGAACACAGACAATTATAACAG
AAGATACTGAACCAGTCGAAGAACAACCACTACAAAGTGCTTCATTCGTT
ATGCTTCAAGAACAACCTTCAATTGTAGACGAAAGTGATCTTCCAGAAGA
AGGTGACCTACCAACAGTCAAATCTTTCACCAGAACACAAACAATTACAA
CGGAAGATACTNACCAACAGTCAAATCTTTCACCAGAACACAAACAATTA
CAACGGAAGATACTGAACCAGCCGAAGAACAACCACTACAAAGTGCTTCA
TTCGTTATGCTTCAAGAACAACCTTCAATTGTTGACGAAAGTGATTTTCC
TGAAGAAGGTGACCTACCAACAGTCAAATCTTTCACCAGGACACAAACAA
TTACAACAGAAGATACTGAACCAGTCGAAGAACAACCACTACAAAGTGCT
TCATTCGTTATGCATCAAGAACAACCTTCAATTGTAGACGAAAGTGATCT
TCCAGAAGAAGGTGACCTACCAACAGTCAAATCTTTCACCAGAACACAAA
CAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044801-exon-sc0006241-1491911889:1..2205 | TCONS_00044801-exon-sc0006241-1491911889:1..2205 | Clytia hemisphaerica | exon |
| TCONS_00044801-exon-sc0006241-1510915933:1..2205 | TCONS_00044801-exon-sc0006241-1510915933:1..2205 | Clytia hemisphaerica | exon |
| TCONS_00044801-exon-sc0006241-1575043694:1..2205 | TCONS_00044801-exon-sc0006241-1575043694:1..2205 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006241 | supercontig | sc0006241:1..2205 + |
Blast
The following BLAST results are available for this feature:
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