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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044819 ID=TCONS_00044819|Name=TCONS_00044819|organism=Clytia hemisphaerica|type=transcript|length=805bp
AGCAGGAGAGCGATGGAGAACAaagtgaagatgaagaagatgaagaagac
caagaagaggaagaagaagaagaagaaatcaaaaagcCTCGCCCACCCAA
CAAAAAACGGCGAAAGTCTTCCAAAAATGTCTCAAGTGATGAAGATTGAA
AAACGGTGCTGTCCCTCCAGCGATAAGAATTGAAATGAAAGTGAACCGCA
TTTTGTGGTTGGTTGTCGATTCGATCATACTTTCCTGAGCGAAACTAGCA
ACTGGTTTGTCATCGATAAAAAAAGACATCAAAAGTTGTTTGTTCTAATG
CGATAGGAAGATCGGaagaaataacaaaattttcacaCCAACTTTTCTTC
AAGATCAAGaagaattttaaccttttaTATTAAAAGAACCTCGAAAAATT
GGCCATTAACTGATCTTGACATCCTTTATATATAGTGTAGCATGTATGTA
ACACCCATATCCATATAACAACACTTTATTTTGAAACANTATTTTGTGGT
TGGTTGTCGATTCAATCATACTTTCCTGAGCGAAACTAGCAACTGGCTTG
TCATCGATAAAAAAAAGACATCTTCGAAAGTGGTTGGTTCTAATGCGATA
GGAAGATCGGaagaaataacaaaattttcacaCCAACTTTTCTTCAAGaa
gaattttaaccttttaTATTAAAAGAACCTCGAATAAATTGGCCATTAAC
TGATCTTGACATCCTTTATATATAGTGTAGCATGTATGTAACACTCATAT
CCATATAACAAcactttattttgaaatttaaaggaaagaaaCGGGATAGT
TCGAC Run BLAST on NCBI transcript from alignment at sc0006275:15..1717+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044819 ID=TCONS_00044819|Name=TCONS_00044819|organism=Clytia hemisphaerica|type=transcript|length=1703bp|location=Sequence derived from alignment at sc0006275:15..1717+ (Clytia hemisphaerica)
AGCAGGAGAGCGATGGAGAACAaagtgaagatgaagaagatgaagaagac
caagaagaggaagaagaagaagaagaaatcaaaaagcCTCGCCCACCCAA
CAAAAAACGGCGAAAGTCTTCCAAAAATGTCTCAAGTGATGAAGATTGAA
AAACGGTAAGACGCTTCTTCTATATGGAAAAATGCaggcaatgtttttat
ttccaTTCCTAATAATTCATGATTGTTTTCaattcttaattatatttttc
aactccgACTAatcttttgttgtttggaattttgatgtttttctttcGAA
TTGGACTTGGTATCAAAATatgatcaaaaacaaaaaagcaagttcagcca
gaagtagactctagtagAAACGGCCATGTCTATATTCTTTTGGTGTAGGT
AGAAATTGTAATTTaacagaaaatgaaaacaaaaagtttaaaaacaactC
AATAAGATTCCTTCTTGGGTAAGTCCAATTTACGTTTTTTAGTATTGTCA
GTATTGTCCATCTCTCGTGGCCTACAAACTCCTTAGCATCGGGAAAATGT
TTCGTTGCTAAAATCTTAtactactttaatcggattaactttcgcgattt
cgcgagttttttgccattttcgtgaaattaaaactcgcaaaaacgcgtga
gattcctgactcgcgaaattaaattcaccgcaaaattttttaaactgaaT
TTTCGGCGGAGAAACCAATCCAAAGTCCTCATTTGTAGCAAAAAAGGctc
ttttttgctctttttaggcttattcgcgaaattaaatccagaaaattttg
cgattctttcgctcgcgaaatttaattcgaTTAAAGTACTGAGCTTTATT
GGGTTTCATCTGTGTTCAATGGcatacatgaaaaataaaacctGCGCTAC
TGGGTTTATGGTCTCGTCAAATTTGCTCTGATCACATATAACCCCAAACA
AGCTATTTGAGTTTTaacttgattattttttatttagaagAGCTGTGGCT
TTGAAAATCGGTAGAGATGTTCTACATTGAAGTTTTTTATCTTACCTCGC
CAGGTGCTGTCCCTCCAGCGATAAGAATTGAAATGAAAGTGAACCGCATT
TTGTGGTTGGTTGTCGATTCGATCATACTTTCCTGAGCGAAACTAGCAAC
TGGTTTGTCATCGATAAAAAAAGACATCAAAAGTTGTTTGTTCTAATGCG
ATAGGAAGATCGGaagaaataacaaaattttcacaCCAACTTTTCTTCAA
GATCAAGaagaattttaaccttttaTATTAAAAGAACCTCGAAAAATTGG
CCATTAACTGATCTTGACATCCTTTATATATAGTGTAGCATGTATGTAAC
ACCCATATCCATATAACAACACTTTATTTTGAAACANTATTTTGTGGTTG
GTTGTCGATTCAATCATACTTTCCTGAGCGAAACTAGCAACTGGCTTGTC
ATCGATAAAAAAAAGACATCTTCGAAAGTGGTTGGTTCTAATGCGATAGG
AAGATCGGaagaaataacaaaattttcacaCCAACTTTTCTTCAAGaaga
attttaaccttttaTATTAAAAGAACCTCGAATAAATTGGCCATTAACTG
ATCTTGACATCCTTTATATATAGTGTAGCATGTATGTAACACTCATATCC
ATATAACAAcactttattttgaaatttaaaggaaagaaaCGGGATAGTTC
GAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044819-exon-sc0006275-1491911889:15..169 | TCONS_00044819-exon-sc0006275-1491911889:15..169 | Clytia hemisphaerica | exon |
| TCONS_00044819-exon-sc0006275-1510915933:15..169 | TCONS_00044819-exon-sc0006275-1510915933:15..169 | Clytia hemisphaerica | exon |
| TCONS_00044819-exon-sc0006275-1575043694:15..169 | TCONS_00044819-exon-sc0006275-1575043694:15..169 | Clytia hemisphaerica | exon |
| TCONS_00044819-exon-sc0006275-1491911889:1068..1717 | TCONS_00044819-exon-sc0006275-1491911889:1068..1717 | Clytia hemisphaerica | exon |
| TCONS_00044819-exon-sc0006275-1510915933:1068..1717 | TCONS_00044819-exon-sc0006275-1510915933:1068..1717 | Clytia hemisphaerica | exon |
| TCONS_00044819-exon-sc0006275-1575043694:1068..1717 | TCONS_00044819-exon-sc0006275-1575043694:1068..1717 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006275 | supercontig | sc0006275:15..1717 + |
Blast
The following BLAST results are available for this feature:
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