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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044841 ID=TCONS_00044841|Name=TCONS_00044841|organism=Clytia hemisphaerica|type=transcript|length=1641bp
GTAATCCAAGAGCAACACACTCCTAAGGAGAGATGCAACTCAAACAAAAC
TGACTAAACTGTAGTGGGTCGTTGAGTGGTTTCATTCATTACATATTGAG
ATAGGTTTGAACAAATTTGGATAAATGTAACTTGCCTCTTCGACAGCACC
ATAAACATCATACTGGATCATGCTATACTTTATACATTTGATGTAAATCT
ACACCTGCGGCATTCGAACTGCAAATCTCGTCACATTTAAAATCTATGCA
TGAATTCATCAATATAGATATTGGAGATAATTCATATCATTGATTTTCGG
TTGTATGTGAAAGGGAATACCCTTCTCTGTAAtaaactttctttgatttt
ataaCTTGCAACGAAGGAAGAATACCTCATTGAACGAAACCGAAAGTGAA
ACTTCTCGCTTGATACAAGAAATATCCATCGGAGAATGGTTCAGCCACGA
GTTCAAAGACGGTAGTTTTGCTTTTCATAAATAACCTGACAAGATACAAT
ATATTACAGTGACACGGCTGAATGAATGAACGAAGGAACgaatgaacgaa
tgaatgaatgaatggacCCCGTTTTAACATATGTGAAAAGTTGGCTTATT
ATTGATCACTGGATGACGTTCATTGACAAACATCAGCCCGAGTCTCTTCA
AACTTACATGTTCAACACCAGGCTATCTATACGTACTTCCTTGTTTTGcc
aaataataagaaaaagaaatgttttcaaCGATTGAGATTGAGATTTTAAG
TTTAAGGTACTTTTACTTGTAACGGTATTATGAAAGGGATTCACGCTACA
AAGAGAGGACAGACTTCAAGGAGCTGAAGGAAGGAGGAAATGACGCTGTA
AATGTAACCACACTCTAACCAACCACTTTATTTGGGAGCATATCTAacac
catgttcagacgttactgTTCCGTATCGTTCCGAAAAGAAACAGCTCCAA
AACACTCGTCAAAATtagaaacgtcaaaaaagaagacgttacaaagatCG
AAACTAGTATGAGCACTTCCTATCAGTAGCAAATACCACACCGGAGCGAT
ACGAAACAGTAACGTTTGATAACATGGTCTAAATCGAGCAAAACCGTTTC
GATCCGTTTTGCTTTGTAAGGccttgtaacgtcttctttttgacgCTTCA
AATTTTGACGATCACAcctgtttcggaaccgtttcgtttcggaacgatac
ggagccgtaacgtctgaacatgatcTAAAAGGGGATGAAAAAATTCATTG
GTTGCCAAATTTAGTATTTTCTGTGTTTTTTAATCTTTCTATGACCCTTT
CTGGGAATTTTTTGAACTGACAACGTGGCGTTgtcacttttgattttctt
ctaCAGAAAGTTGACGAGGGCTCGTTTTTAAAAGTTGAAGTCCACCcaag
aattatttttaaatcGACGAAGAATTCGTGTCGATTCTAGTTTTTGAATA
ATCTTCCGATGGAAAAACTTAAACCATGGGTGTTTGGATTGATTCAGGTG
TTTAATCTCGCCAAAAggtcatgtagtttttttactTGCATAATTTTGAA
GgccataaaaaatcattaacgTGGTTTATTTTCCATAATTTGAAAATGAC
AAACCAATTTCAcggatttcgaaattttctaaagtcaaaaa Run BLAST on NCBI transcript from alignment at sc0006303:14..1654 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044841 ID=TCONS_00044841|Name=TCONS_00044841|organism=Clytia hemisphaerica|type=transcript|length=1641bp|location=Sequence derived from alignment at sc0006303:14..1654 (Clytia hemisphaerica)
tttttgactttagaaaatttcgaaatccgTGAAATTGGTTTGTCATTTTC
AAATTATGGAAAATAAACCAcgttaatgattttttatggcCTTCAAAATT
ATGCAagtaaaaaaactacatgaccTTTTGGCGAGATTAAACACCTGAAT
CAATCCAAACACCCATGGTTTAAGTTTTTCCATCGGAAGATTATTCAAAA
ACTAGAATCGACACGAATTCTTCGTCgatttaaaaataattcttgGGTGG
ACTTCAACTTTTAAAAACGAGCCCTCGTCAACTTTCTGtagaagaaaatc
aaaagtgacAACGCCACGTTGTCAGTTCAAAAAATTCCCAGAAAGGGTCA
TAGAAAGATTAAAAAACACAGAAAATACTAAATTTGGCAACCAATGAATT
TTTTCATCCCCTTTTAgatcatgttcagacgttacggctccgtatcgttc
cgaaacgaaacggttccgaaacaggTGTGATCGTCAAAATTTGAAGcgtc
aaaaagaagacgttacaaggCCTTACAAAGCAAAACGGATCGAAACGGTT
TTGCTCGATTTAGACCATGTTATCAAACGTTACTGTTTCGTATCGCTCCG
GTGTGGTATTTGCTACTGATAGGAAGTGCTCATACTAGTTTCGatctttg
taacgtcttcttttttgacgtttctaATTTTGACGAGTGTTTTGGAGCTG
TTTCTTTTCGGAACGATACGGAAcagtaacgtctgaacatggtgtTAGAT
ATGCTCCCAAATAAAGTGGTTGGTTAGAGTGTGGTTACATTTACAGCGTC
ATTTCCTCCTTCCTTCAGCTCCTTGAAGTCTGTCCTCTCTTTGTAGCGTG
AATCCCTTTCATAATACCGTTACAAGTAAAAGTACCTTAAACTTAAAATC
TCAATCTCAATCGttgaaaacatttctttttcttattatttggCAAAACA
AGGAAGTACGTATAGATAGCCTGGTGTTGAACATGTAAGTTTGAAGAGAC
TCGGGCTGATGTTTGTCAATGAACGTCATCCAGTGATCAATAATAAGCCA
ACTTTTCACATATGTTAAAACGGGgtccattcattcattcattcgttcat
tcGTTCCTTCGTTCATTCATTCAGCCGTGTCACTGTAATATATTGTATCT
TGTCAGGTTATTTATGAAAAGCAAAACTACCGTCTTTGAACTCGTGGCTG
AACCATTCTCCGATGGATATTTCTTGTATCAAGCGAGAAGTTTCACTTTC
GGTTTCGTTCAATGAGGTATTCTTCCTTCGTTGCAAGttataaaatcaaa
gaaagtttaTTACAGAGAAGGGTATTCCCTTTCACATACAACCGAAAATC
AATGATATGAATTATCTCCAATATCTATATTGATGAATTCATGCATAGAT
TTTAAATGTGACGAGATTTGCAGTTCGAATGCCGCAGGTGTAGATTTACA
TCAAATGTATAAAGTATAGCATGATCCAGTATGATGTTTATGGTGCTGTC
GAAGAGGCAAGTTACATTTATCCAAATTTGTTCAAACCTATCTCAATATG
TAATGAATGAAACCACTCAACGACCCACTACAGTTTAGTCAGTTTTGTTT
GAGTTGCATCTCTCCTTAGGAGTGTGTTGCTCTTGGATTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044841-exon-sc0006303-1491911889:14..1654 | TCONS_00044841-exon-sc0006303-1491911889:14..1654 | Clytia hemisphaerica | exon |
| TCONS_00044841-exon-sc0006303-1510915933:14..1654 | TCONS_00044841-exon-sc0006303-1510915933:14..1654 | Clytia hemisphaerica | exon |
| TCONS_00044841-exon-sc0006303-1575043694:14..1654 | TCONS_00044841-exon-sc0006303-1575043694:14..1654 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006303 | supercontig | sc0006303:14..1654 . |
Blast
The following BLAST results are available for this feature:
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