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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044872 ID=TCONS_00044872|Name=TCONS_00044872|organism=Clytia hemisphaerica|type=transcript|length=1406bp
ACAAAAGGTAGGAAATAGGAGTGAGATCAATTTAAGGAGATCTAGCAGGC
GGGACTAGCTGAAGATAAATTGCCGGTAGCCGATACTGAAATAGATAAAA
TGGCAGCAAAGAGCCGACGGTATAGATATCCTGTAGAGGCGGGATGAGTG
ACCCCTGAAAGGCCTAGTGCGGGAGATGCGGGACCGATAATTAACCTAAG
CTAATAAATTAGCTCCAACAATTTGCTAATAAAAGTTTATTTCGATGACG
GCATTTGGAAACCAgttcagttcttttgtttagGACTTCTTTTTGACGAG
GGTAATTTAGACATTGATTTTGCACAACAAAAAATTAGTTAAATGTAGAA
CTTAGAAACAAAAATgcgcaaaaaaataaaaatgtaaaattgttCGTCTT
CATCGCTGCATCTGAAGTAACGTTCTTATTATTTAACTGAGAACATTGTT
TAAGCTCCTCTTCTAAAGACTTTGGAAGAGGCACTGTTATCTCTTTGATA
GAGCATTTGCGATTTCTACAATGTGAAATCTTGTCAATTCGGAATAAAGT
GTCCAAACGTGATGTCTTAAAAATGGAACTCAATTCTCCAGTCAATGCCT
TCTGCAGTAAGGAGTTCACGATGTCAGTGTCTTGAACTCTAGAGATATCA
AGTAGAAGGTACATCTTTATTTCATCAAGTCTCTCTGCAATTAGATTCTG
ATTGAAGATATGATAAGAACTGTCTTTAATACTTCCGAGATCATCTAACA
AACAACGCATCTTCAAAGCCATGTCAAGTTTCTGAGTCTCGTTAACAAGT
CTGTTAGCAGTATTTTCTGTTCCATTTACTTCTTGGAGAGTAATTTCCAG
AAACTGATAATGGCTTTGTGCCGGTATATCCTGATTCCAAGAACATTCTC
TATAACCAAGACCCCATATTTGTGATATAGCCTTGATAGACTCTAGCGTG
TTTTTGTGTAACTTTGAACCGATCGAGTTAACAAACTGTGGAAAATCATT
TTGATCCAACAAACAATAATTGAAtggatttctattgtaatatgcACATT
GTGATTTTCGTAGTAGACAACAATCGAAGACAGATTCATATTTTGATTGG
AATTGATTACAACCAATGCTTGATGATtgctaaaagtaaaaattttagtA
ATAGTCCATGGGCTATTCCAGAGAAAATTTGTACCCCTTATGTTGAGGAG
ATCGTTTTTTTTAAGTGActccctggatttttttttccaatttttcagga
cccccttCGAATTTGTTCTCCCATTTTTTTGGACACCCCGGATTTTCTAC
CTCATTATACTGATCACCTTTAATTTTCAACctgattttactgaccaccc
tggattttatcattcatgaaaccagaccaccctggactttttattttcca
aaccac Run BLAST on NCBI transcript from alignment at sc0006361:586..1991 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044872 ID=TCONS_00044872|Name=TCONS_00044872|organism=Clytia hemisphaerica|type=transcript|length=1406bp|location=Sequence derived from alignment at sc0006361:586..1991 (Clytia hemisphaerica)
gtggtttggaaaataaaaagtccagggtggtctggtttcatgaatgataa
aatccagggtggtcagtaaaatcagGTTGAAAATTAAAGGTGATCAGTAT
AATGAGGTAGAAAATCCGGGGTGTCCAAAAAAATGGGAGAACAAATTCGa
agggggtcctgaaaaattggaaaaaaaaatccagggagTCACTTAAAAAA
AACGATCTCCTCAACATAAGGGGTACAAATTTTCTCTGGAATAGCCCATG
GACTATTactaaaatttttacttttagcaATCATCAAGCATTGGTTGTAA
TCAATTCCAATCAAAATATGAATCTGTCTTCGATTGTTGTCTACTACGAA
AATCACAATGTgcatattacaatagaaatccaTTCAATTATTGTTTGTTG
GATCAAAATGATTTTCCACAGTTTGTTAACTCGATCGGTTCAAAGTTACA
CAAAAACACGCTAGAGTCTATCAAGGCTATATCACAAATATGGGGTCTTG
GTTATAGAGAATGTTCTTGGAATCAGGATATACCGGCACAAAGCCATTAT
CAGTTTCTGGAAATTACTCTCCAAGAAGTAAATGGAACAGAAAATACTGC
TAACAGACTTGTTAACGAGACTCAGAAACTTGACATGGCTTTGAAGATGC
GTTGTTTGTTAGATGATCTCGGAAGTATTAAAGACAGTTCTTATCATATC
TTCAATCAGAATCTAATTGCAGAGAGACTTGATGAAATAAAGATGTACCT
TCTACTTGATATCTCTAGAGTTCAAGACACTGACATCGTGAACTCCTTAC
TGCAGAAGGCATTGACTGGAGAATTGAGTTCCATTTTTAAGACATCACGT
TTGGACACTTTATTCCGAATTGACAAGATTTCACATTGTAGAAATCGCAA
ATGCTCTATCAAAGAGATAACAGTGCCTCTTCCAAAGTCTTTAGAAGAGG
AGCTTAAACAATGTTCTCAGTTAAATAATAAGAACGTTACTTCAGATGCA
GCGATGAAGACGaacaattttacatttttatttttttgcgcATTTTTGTT
TCTAAGTTCTACATTTAACTAATTTTTTGTTGTGCAAAATCAATGTCTAA
ATTACCCTCGTCAAAAAGAAGTCctaaacaaaagaactgaacTGGTTTCC
AAATGCCGTCATCGAAATAAACTTTTATTAGCAAATTGTTGGAGCTAATT
TATTAGCTTAGGTTAATTATCGGTCCCGCATCTCCCGCACTAGGCCTTTC
AGGGGTCACTCATCCCGCCTCTACAGGATATCTATACCGTCGGCTCTTTG
CTGCCATTTTATCTATTTCAGTATCGGCTACCGGCAATTTATCTTCAGCT
AGTCCCGCCTGCTAGATCTCCTTAAATTGATCTCACTCCTATTTCCTACC
TTTTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044872-exon-sc0006361-1491911889:586..1991 | TCONS_00044872-exon-sc0006361-1491911889:586..1991 | Clytia hemisphaerica | exon |
| TCONS_00044872-exon-sc0006361-1510915933:586..1991 | TCONS_00044872-exon-sc0006361-1510915933:586..1991 | Clytia hemisphaerica | exon |
| TCONS_00044872-exon-sc0006361-1575043694:586..1991 | TCONS_00044872-exon-sc0006361-1575043694:586..1991 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006361 | supercontig | sc0006361:586..1991 . |
Blast
The following BLAST results are available for this feature:
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