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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044929 ID=TCONS_00044929|Name=TCONS_00044929|organism=Clytia hemisphaerica|type=transcript|length=638bp
gaacaaaacaaaaactcgGCTTCTTCGGGCCGATGTCTTTCAAGAAGGGT
CCATGGCATacactttcaaaacaagatCCTTCAAAGACAAATTTTAAACG
TACAACACCTCATAAAGTAAATAAAAGCAGTACCAAAAACACTAAACGTT
ACGGCGTGCCGTACGCCGGTGTTGGATATCCGTATTATAATTACAATAAT
AATTTATACGGCAGGAGTTTGACGCCTTACCAAGGATATTACGACACTAT
GATGTCCAACCAAAAAGGCTACTTTAACaattataaaaaagactttgttC
ATAACCAATATTTCATGAGTCCGAATGAACCCGTTTATGAATATTCGGTA
AAGCCATCCCGAAATCAGAATCCGAAATCAAGATCGGATGCTCTACATTA
TCGGACGCTTTCGGGATATGGGTATTTGAATAATGAGGAGTTATTGGCAC
GTAGTAAAAACAAAGAAGGTCGATTGGCTAGCAGAAGTTGGCAGAAGCCG
TGGTCGTTGGTACGGCCGTTGGAAATCAAAAAACACGTGCAACGAATGGA
GTTGGAAAAACATGGAGATGATTATCCTGATGGCTCCAACACGCGACCAG
ACTTAATGTTACCACGAATGGAAGAGCGAGATCCTTAC Run BLAST on NCBI transcript from alignment at sc0006481:6..1096- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044929 ID=TCONS_00044929|Name=TCONS_00044929|organism=Clytia hemisphaerica|type=transcript|length=1091bp|location=Sequence derived from alignment at sc0006481:6..1096- (Clytia hemisphaerica)
GAACAAAACAAAAACTCGGCTTCTTCGGGCCGATGTCTTTCAAGAAGGGT
CCATGGCATACACTTTCAAAACAAGATCCTTCAAAGACAAATTTTAAACG
TACAACACCTCATAAAGTAAATAAAAGCAGTACCAAAAACACTAAACGTT
ACGGCGTGCCGTACGCCGGTGTTGGATATCCGTATTATAATTACAATAAT
AATTTATACGGCAGGAGTTTGACGCCTTACCAAGGATATTACGACACTAT
GATGTCCAACCAAAAAGGCTACTTTAACAATTATAAAAAAGACTTTGTTC
ATAACCAATATTTCATGAGTCCGAATGAACCCGTTTATGAATATTCGGTA
AAGCCATCCCGAAATCAGAATCCGAAATCAAGATCGGATGCTCTACATTA
TCGGACGCTTTCGGGATATGGGTATTTGAATAATGAGGAGTTATTGGCAC
GTAGTAAAAACAAAGAAGGTCGATTGGCTAGCAGAAGTTGGCAGAAGCCG
TGGTCGTTGGTACGGCCGTTGGAAATCAAAAAACACGTGCAACGAATGGA
GTTGGAAAAACATGGAGATGATTATCCTGATGGTATGTCTGTCTTTTTAA
AGTGTAAAAACATCGCTGTCTCAATGCTTCAAAAATTTCAAGTTCCCCTG
TATAAAGGATATAAATGCATAATTGAAATTTTTCGATCTCCCCTGTGTCA
CTGTATGTTTTAAATTAAAAAAGGACAACTGTACCACCCATACGAATTCA
TTCCTCTTTGTTTATCACAAGAACTAACTACATGTGGTTTAAAAGAATGA
CAAATAACGCATGTGTGTTATTAATGCAGGAATTGCAAGACGAACCTACT
GCATTTCATAATTCTAATCTTTCAAGCTCCTGTGTCTCAATGTACGACTG
TGATTTTTCAAGCTACTCCCCTGTCTCAATTTATGATTATAAATCTTTCA
CTGTCTTAATGATTCAAATCTTCTTACAAAACATGTTGAGAGTCACTAAT
CTTACGTTAAATGTTACAAATTCATTTTTCAGAAGGCTCCAACACGCGAC
CAGACTTAATGTTACCACGAATGGAAGAGCGAGATCCTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044929-exon-sc0006481-1575043694:515..1096 | TCONS_00044929-exon-sc0006481-1575043694:515..1096 | Clytia hemisphaerica | exon |
| TCONS_00044929-exon-sc0006481-1575043694:6..61 | TCONS_00044929-exon-sc0006481-1575043694:6..61 | Clytia hemisphaerica | exon |
| TCONS_00044929-exon-sc0006481-1510915933:515..1096 | TCONS_00044929-exon-sc0006481-1510915933:515..1096 | Clytia hemisphaerica | exon |
| TCONS_00044929-exon-sc0006481-1510915933:6..61 | TCONS_00044929-exon-sc0006481-1510915933:6..61 | Clytia hemisphaerica | exon |
| TCONS_00044929-exon-sc0006481-1491911889:515..1096 | TCONS_00044929-exon-sc0006481-1491911889:515..1096 | Clytia hemisphaerica | exon |
| TCONS_00044929-exon-sc0006481-1491911889:6..61 | TCONS_00044929-exon-sc0006481-1491911889:6..61 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006481 | supercontig | sc0006481:6..1096 - |
Blast
The following BLAST results are available for this feature:
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