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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044996 ID=TCONS_00044996|Name=TCONS_00044996|organism=Clytia hemisphaerica|type=transcript|length=1297bp
GGCTGAAAAAGGAACTatttcagttttttaaaaattgtaaatgaTTGAAt
gtattttgcttttatttaagTTACAACCATAATAATGCATAGATATCTCT
TCTACTATAGAAACCataccgtaaatcctcgaataagcgccccgcttgaa
taacCACCctgctcgaataagcgccccttttagttaaaataatattataa
gtGCCCCCCTTTGAATAAGCGCCTCCTCCAGgaaggggcgcttattcaaa
tATTGTTCttgattgaataagatattgaGTAGATACTTGTGTCTTAAGCA
Gaaagaaagcaattaagaataaaatgatagaaattgtcaattggattttt
ccaatttttcttttattcatccttttttgaaaaatcaacccagtttaagc
agattccgaatttgttgatatacgaatttccgaaataaaaaaataagcgc
cccgctcgaataagcgcccggctttgagcctgaaaaattaaataagcgcc
cgggcgcttattcgaggatttacggtaaTAACAATTTACATAAATTCCTC
ACTCAAACTCAAAATAGAGCCTTATAAATACCAATTTGATTGGTACTTAC
GTACTTTTAGGGCTTTTTAGTCCTCCGTTGTATTTACTGTTTCTCATTGC
AGTTCGGTTCTAATACTTAGCTCgtgtttttgtaaattttgtaagccaat
acacgttttttaagattcgtaaaaatttgagaaatttgaataaCTGACAC
TTCTTTTTCGACCGTCTATCTGAAACATATTTGCtgaatgtttttctttg
ttcGTCGTATCATTTTGTTGAGTTCCTACAGGTGCAAGTCTGCTCGCGCG
TTGCATTAATGGAGAGGCTTGGGGCGAGTTTGGTGTTGAAGATGAACCAA
TCAGATTCAAAGAAGGTAGCCGTAGTCGTGCTGGATTTAGTTGTGGTGCT
GGACTTGATAAAACTCTTTTTAATTGTTCTTTATCATTATAAGGAATTTC
TCTGATGGACTGATGTGTTGATGTATTTGGTGATGAATGGTGGAGGTTTT
CGCTTGATGAAGCTTTGATGACAACTGGCTTGGTCTTCCAATTGTTGAAA
TTCATTGTCTTTTCTTCCTATGtgcttttgatatttttcgcATACCTAAA
acatcaaagtaaaagaaaatgatAACCTTTCTTTCCAGTCATGACCTCAC
ACACCTCTCCTAACCTGATATGATATGGTATTCAACCATAGGCTAATTTC
TCACAAATTTCTCATAGAAATGTTTCCAGTTTTGTCGACTAGTCCGC Run BLAST on NCBI transcript from alignment at sc0006639:1..1372+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044996 ID=TCONS_00044996|Name=TCONS_00044996|organism=Clytia hemisphaerica|type=transcript|length=1372bp|location=Sequence derived from alignment at sc0006639:1..1372+ (Clytia hemisphaerica)
GGCTGAAAAAGGAACTatttcagttttttaaaaattgtaaatgaTTGAAt
gtattttgcttttatttaagTTACAACCATAATAATGCATAGATATCTCT
TCTACTATAGAAACCataccgtaaatcctcgaataagcgccccgcttgaa
taacCACCctgctcgaataagcgccccttttagttaaaataatattataa
gtGCCCCCCTTTGAATAAGCGCCTCCTCCAGgaaggggcgcttattcaaa
tATTGTTCttgattgaataagatattgaGTAGATACTTGTGTCTTAAGCA
Gaaagaaagcaattaagaataaaatgatagaaattgtcaattggattttt
ccaatttttcttttattcatccttttttgaaaaatcaacccagtttaagc
agattccgaatttgttgatatacgaatttccgaaataaaaaaataagcgc
cccgctcgaataagcgcccggctttgagcctgaaaaattaaataagcgcc
cgggcgcttattcgaggatttacggtaaTAACAATTTACATAAATTCCTC
ACTCAAACTCAAAATAGAGCCTTATAAATACCAATTTGATTGGTACTTAC
GTACTTTTAGGGCTTTTTAGTCCTCCGTTGTATTTACTGTTTCTCATTGC
AGTTCGGTTCTAATACTTAGCTCgtgtttttgtaaattttgtaagccaat
acacgttttttaagattcgtaaaaatttgagaaatttgaataaCTGACAC
TTCTTTTTCGACCGTCTATCTGAAACATATTTGCtgaatgtttttctttg
ttcGTCGTATCATTTTGTTGAGTTCCTACAGGTGCAAGTCTGCTCGCGCG
TTGCATTAATGGAGAGGCTTGGGGCGAGTTTGGTGTTGAAGATGAACCAA
TCAGATTCAAAGAAGGTAGCCGTAGTCGTGCTGGATTTAGTTGTGGTGCT
GGACTTGATAAAACTCTTTTTAATTGTTCTTTATCATTATAAGGAATTTC
TCTGATGGACTGATGTGTTGATGTATTTGGTGATGAATGGTGGAGGTTTT
CGCTTGATGAAGCTTTGATGACAACTGGCTTGGTCTTCCAATTGTTGAAA
TTCATTGTCTTTTCTTCCTATGtgcttttgatatttttcgcATACCTAAA
acatcaaagtaaaagaaaatgatAACCTTTCTTTCCAGTCATGACCTCAC
ACACCTCTCCTAACCTGATATGATATGGTATTCAACCATAGGCTAATTNA
CCTTTCTTTCCAGTCATGACCTCACACACCTCTCCTAACCTGATATGATA
TGGTATTCAACCATAGGCTAATTTCTCACAAATTTCTCATAGAAATGTTT
CCAGTTTTGTCGACTAGTCCGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044996-exon-sc0006639-1491911889:1..1241 | TCONS_00044996-exon-sc0006639-1491911889:1..1241 | Clytia hemisphaerica | exon |
| TCONS_00044996-exon-sc0006639-1510915933:1..1241 | TCONS_00044996-exon-sc0006639-1510915933:1..1241 | Clytia hemisphaerica | exon |
| TCONS_00044996-exon-sc0006639-1575043694:1..1241 | TCONS_00044996-exon-sc0006639-1575043694:1..1241 | Clytia hemisphaerica | exon |
| TCONS_00044996-exon-sc0006639-1491911889:1317..1372 | TCONS_00044996-exon-sc0006639-1491911889:1317..1372 | Clytia hemisphaerica | exon |
| TCONS_00044996-exon-sc0006639-1510915933:1317..1372 | TCONS_00044996-exon-sc0006639-1510915933:1317..1372 | Clytia hemisphaerica | exon |
| TCONS_00044996-exon-sc0006639-1575043694:1317..1372 | TCONS_00044996-exon-sc0006639-1575043694:1317..1372 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006639 | supercontig | sc0006639:1..1372 + |
Blast
The following BLAST results are available for this feature:
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