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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045047 ID=TCONS_00045047|Name=TCONS_00045047|organism=Clytia hemisphaerica|type=transcript|length=948bp
GAGTAAATGACTTCCAGTACGTGCAGTCCTGAGGAGTAtgttttcaatat
aaaaaagcaaTGTAAGGGTCTAAATGTGTGAAGATGAGTGATAAGTACaa
aagggtgtaaaaagtgagcTAAACATAGTGCCTACCTAATAGGAATGATA
TTGTCTTTGAAGGGATGTGGCCATTATTGACAATcagagttgcttataaa
aatgatGTGTATATGAATATCTTAAGTTGAAGCTAGAGTCACTGTTCAAA
ATACCAATCTTTTTGTGCCAGTGCTAGAGCATTCATAGAACAAACAAATC
TTCATTCCTATTCACTGATAGGCCTGGTAAAAATTGCCAAAAGCCAGATG
AATCGGTCACCTGAATGAAAACAATATCTGAGATAAGAACCATTtacatt
tcaattgttttttgaaGTTGATGGGTTAGTTGGGATTTAAATGATCAAAG
GTTAAATTACTTCCAAAAAGTAGATGTGTTGATATATCGAGGTATACTTT
CAGTGTATGCTTGAAATGTGCACNTCCAAAAAGTAGATGTGTTGATATAT
CGAGGTATACTTGCAGTGTATGCTTGAAATGTGCACtaattttattttgc
ttttagTCATTAAACCCATACTTCAATTCTAGCTGCTCTAGTATTCAGTG
TTTCCTGAAgtgactacacgctttttttataagaatgtccatgatgaaaa
tggccgaaaaactaagaataatgctaagaatattgccatcgtggaatttt
gctactcaagctaagaaagccatttttagagcattcttgATAATAATTTG
TCAATTACCCCGAAGACGCCAAGTATGGCtcacttttttcacaaaaatgc
cattttatgcttgagacgtatgtactaaatgttaaatctagtctgaatta
ggatcctaacctaagagtgctgtaagaatattttaggatgattttccc Run BLAST on NCBI transcript from alignment at sc0006770:152..1099 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045047 ID=TCONS_00045047|Name=TCONS_00045047|organism=Clytia hemisphaerica|type=transcript|length=948bp|location=Sequence derived from alignment at sc0006770:152..1099 (Clytia hemisphaerica)
gggaaaatcatcctaaaatattcttacagcactcttaggttaggatccta
attcagactagatttaacatttagtacatacgtctcaagcataaaatggc
atttttgtgaaaaaagtgaGCCATACTTGGCGTCTTCGGGGTAATTGACA
AATTATTATcaagaatgctctaaaaatggctttcttagcttgagtagcaa
aattccacgatggcaatattcttagcattattcttagtttttcggccatt
ttcatcatggacattcttataaaaaaagcgtgtagtcacTTCAGGAAACA
CTGAATACTAGAGCAGCTAGAATTGAAGTATGGGTTTAATGActaaaagc
aaaataaaattaGTGCACATTTCAAGCATACACTGCAAGTATACCTCGAT
ATATCAACACATCTACTTTTTGGANGTGCACATTTCAAGCATACACTGAA
AGTATACCTCGATATATCAACACATCTACTTTTTGGAAGTAATTTAACCT
TTGATCATTTAAATCCCAACTAACCCATCAACttcaaaaaacaattgaaa
tgtaAATGGTTCTTATCTCAGATATTGTTTTCATTCAGGTGACCGATTCA
TCTGGCTTTTGGCAATTTTTACCAGGCCTATCAGTGAATAGGAATGAAGA
TTTGTTTGTTCTATGAATGCTCTAGCACTGGCACAAAAAGATTGGTATTT
TGAACAGTGACTCTAGCTTCAACTTAAGATATTCATATACACatcatttt
tataagcaactctgATTGTCAATAATGGCCACATCCCTTCAAAGACAATA
TCATTCCTATTAGGTAGGCACTATGTTTAgctcactttttacaccctttt
GTACTTATCACTCATCTTCACACATTTAGACCCTTACAttgcttttttat
attgaaaacaTACTCCTCAGGACTGCACGTACTGGAAGTCATTTACTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045047-exon-sc0006770-1491911889:152..1099 | TCONS_00045047-exon-sc0006770-1491911889:152..1099 | Clytia hemisphaerica | exon |
| TCONS_00045047-exon-sc0006770-1510915933:152..1099 | TCONS_00045047-exon-sc0006770-1510915933:152..1099 | Clytia hemisphaerica | exon |
| TCONS_00045047-exon-sc0006770-1575043694:152..1099 | TCONS_00045047-exon-sc0006770-1575043694:152..1099 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006770 | supercontig | sc0006770:152..1099 . |
Blast
The following BLAST results are available for this feature:
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