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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045055 ID=TCONS_00045055|Name=TCONS_00045055|organism=Clytia hemisphaerica|type=transcript|length=1095bp
GTAATGGCAGTCGCGTCGGATTGAATGCAATCCGTGAAATATGTGCGCGT
AACTCTCTGGCAATGTCAGCAGAATTGCTACAGGATTTGGTAGAGTACAA
AACCACTAAAAGCAAAACAGTATAAATGATGCTCGATCTCTCATACAACT
ATACATGAATTTTGATTCAACTCTATTACGGAAGAAAGACAGAGGTTAAC
CTTGCATTGGAACACCGTTTTGAATTTGACGACGTTGCTTATTATTCCAA
GGATCAATTGTTGGATAGTAATATGAATTGAATTGCGACTTCTCACACCA
TCTTTTGGGATTCGCTCAACGAGTTGAAGGTCGTGTTCATAGGTCCTTGT
GACACGCGTCTGATGCTGAAACGTTTTGTGTAGTGAAGATCTATTGTAGA
TGGTGAAATGTTTATATATTTCAATCAAGCAAACGTTCTTGGTGATCTAA
GCTCTGGAAACCATCGATTATTTACTCGCTCTTCTTTGAACATTTTCTAC
GGCTGTGATATTTCTCTTCTAGTGAGGTGTCCAGACCATAGATTTaaaaa
gcccaaagggctagatatcgtgcttttgctgaaaagtgtgccgaggctag
gtaggaaatcctaccttaGTCACGTGTCCAGACTGCTTGGCCATATTCAA
GGTGCGGACGAACATGGGCATAGAATGAGCtgaaccatttttgcttgatt
gggggctgcatttttcaaaaaatactgggggctaGTTTGCTAAGGGGGGC
TtagtgttgtgtaatagaactggaGGCAGAGCTGATCTCCGTAAATTACA
ATAAGCCCTCTTATTCAACATCACAAAGATGTTCACAACTTCATGAACAA
TTATTTGGTGAAAAGTTAGGTTTCTTTTCTCTACAAAACATTtacaaaat
taagaacatttaaaggcccttaTACCTTGATGGGCAAATCGTCGATGAaa
agttcaatttctttttctaaaaaatatttaccacattcttgacatttaaa
AGACTTTATACCTCGATGGACAGTACTCTGCCAAGTTAAGTTCTTATGCG
AGGTTATGGTCGTTTTTTGtctaaaagatttaccacatttTCGAC Run BLAST on NCBI transcript from alignment at sc0006793:153..1453+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045055 ID=TCONS_00045055|Name=TCONS_00045055|organism=Clytia hemisphaerica|type=transcript|length=1301bp|location=Sequence derived from alignment at sc0006793:153..1453+ (Clytia hemisphaerica)
GTAATGGCAGTCGCGTCGGATTGAATGCAATCCGTGAAATATGTGCGCGT
AACTCTCTGGCAATGTCAGCAGAATTGCTACAGGATTTGGTAGAGTACAA
AACCACTAAAAGCAAAACAGTATAAATGATGCTCGATCTCTCATACAACT
ATACATGAATTTTGATTCAACTCTATTACGGAAGAAAGACAGAGGTTTGT
TTTAGTATTAgtattattcttttattttatttatttgatgaaTTCCCCTT
CGCAGGCATTTCTGCCTCCTCCGAAAGGATCTACAGTATAAAAGGTTGCT
TGGAAAGAAGTCGTTTTGTGAAGTCCTGAAGTCCAAAGTTCTCTTCTCTC
CCGTTTGGTTGCTGGAATCTTTACGGTCTTTCTTTCCATGTTTCGTCCAG
GTTAACCTTGCATTGGAACACCGTTTTGAATTTGACGACGTTGCTTATTA
TTCCAAGGATCAATTGTTGGATAGTAATATGAATTGAATTGCGACTTCTC
ACACCATCTTTTGGGATTCGCTCAACGAGTTGAAGGTCGTGTTCATAGGT
CCTTGTGACACGCGTCTGATGCTGAAACGTTTTGTGTAGTGAAGATCTAT
TGTAGATGGTGAAATGTTTATATATTTCAATCAAGCAAACGTTCTTGGTG
ATCTAAGCTCTGGAAACCATCGATTATTTACTCGCTCTTCTTTGAACATT
TTCTACGGCTGTGATATTTCTCTTCTAGTGAGGTGTCCAGACCATAGATT
Taaaaagcccaaagggctagatatcgtgcttttgctgaaaagtgtgccga
ggctaggtaggaaatcctaccttaGTCACGTGTCCAGACTGCTTGGCCAT
ATTCAAGGTGCGGACGAACATGGGCATAGAATGAGCtgaaccatttttgc
ttgattgggggctgcatttttcaaaaaatactgggggctaGTTTGCTAAG
GGGGGCTtagtgttgtgtaatagaactggaGGCAGAGCTGATCTCCGTAA
ATTACAATAAGCCCTCTTATTCAACATCACAAAGATGTTCACAACTTCAT
GAACAATTATTTGGTGAAAAGTTAGGTTTCTTTTCTCTACAAAACATTta
caaaattaagaacatttaaaggcccttaTACCTTGATGGGCAAATCGTCG
ATGAaaagttcaatttctttttctaaaaaatatttaccacattcttgaca
tttaaaAGACTTTATACCTCGATGGACAGTACTCTGCCAAGTTAAGTTCT
TATGCGAGGTTATGGTCGTTTTTTGtctaaaagatttaccacatttTCGA
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045055-exon-sc0006793-1491911889:153..346 | TCONS_00045055-exon-sc0006793-1491911889:153..346 | Clytia hemisphaerica | exon |
| TCONS_00045055-exon-sc0006793-1510915933:153..346 | TCONS_00045055-exon-sc0006793-1510915933:153..346 | Clytia hemisphaerica | exon |
| TCONS_00045055-exon-sc0006793-1575043694:153..346 | TCONS_00045055-exon-sc0006793-1575043694:153..346 | Clytia hemisphaerica | exon |
| TCONS_00045055-exon-sc0006793-1491911889:553..1453 | TCONS_00045055-exon-sc0006793-1491911889:553..1453 | Clytia hemisphaerica | exon |
| TCONS_00045055-exon-sc0006793-1510915933:553..1453 | TCONS_00045055-exon-sc0006793-1510915933:553..1453 | Clytia hemisphaerica | exon |
| TCONS_00045055-exon-sc0006793-1575043694:553..1453 | TCONS_00045055-exon-sc0006793-1575043694:553..1453 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006793 | supercontig | sc0006793:153..1453 + |
Blast
The following BLAST results are available for this feature:
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