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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045066 ID=TCONS_00045066|Name=TCONS_00045066|organism=Clytia hemisphaerica|type=transcript|length=496bp
ttttagaaataaaaggaacaCAAATTTTGTATTAACGCCACAACAATGAT
CTGGTTTTTAACCAGTTTCACtacattttatttccaaaagttTATCAATG
TCATTCGTGTCTTGAATCGAGCTTATGTacgagaaaagaaaaatgagtaT
GAAAATTTGGATTCCAAAATCTCAACATTGAGGTTTGAAAATGAGCCTTC
GGTTATGTTTGAAGATGATCTTGTATGCGAAGACCAGCCGGATGGAAGCA
ATCAGTCTAGACGGTCTCGTCTATCAAGGAAAATGTCGTTTGCAGGTGGT
GTAGATGGAACCGGACAATCAATTGCTATATTGACAAGTGGTGGTGACTC
TCAAGGTATGAATGCAGCAATAAGAGCCACGACAAGGATGGCCTTGTATG
CTGGTGCTAAAGTCTATGCTGTTTATTGGGTAAACTTTATGTTTCTATTT
GAATCACCATCACCAGAATTGTGAATTGCCAAGGGCTGATTAGATG Run BLAST on NCBI protein sequence of TCONS_00045066-protein >TCONS_00045066-protein ID=TCONS_00045066-protein|Name=TCONS_00045066-protein|organism=Clytia hemisphaerica|type=polypeptide|length=142bp
MIWFLTSFTTFYFQKFINVIRVLNRAYVREKKNEYENLDSKISTLRFENE
PSVMFEDDLVCEDQPDGSNQSRRSRLSRKMSFAGGVDGTGQSIAILTSGG
DSQGMNAAIRATTRMALYAGAKVYAVYWVNFMFLFESPSPEL Run BLAST on NCBI transcript from alignment at sc0006819:56..929- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045066 ID=TCONS_00045066|Name=TCONS_00045066|organism=Clytia hemisphaerica|type=transcript|length=874bp|location=Sequence derived from alignment at sc0006819:56..929- (Clytia hemisphaerica)
TTTTAGAAATAAAAGGAACACAAATTTTGTATTAACGCCACAACAATGAT
CTGGTTTTTAACCAGTTTCACTACATTTTATTTCCAAAAGTTTATCAATG
TCATTCGTGTCTTGAATCGAGCTTATGTACGAGAAAAGAAAAATGAGTAT
GAAAATTTGGATTCCAAAATCTCAACATTGAGGTTTGAAAATGAGCCTTC
GGTTATGTTTGAAGATGATCTTGTATGCGAAGACCAGCCGGATGGAAGCA
ATCAGTCTAGACGGTCTCGTCTATCAAGGAAAATGTCGTTTGCAGGTGGT
GTAGATGGAACCGGACAATCAATTGCTATATTGACAAGTGGTGGTGACTC
TCAAGGTATATCTATTGAAATGGTTCTTATTTTGATTTTTTGGTTTAAGG
GGGTATTCAAAAAATACATTTGTTTGATTTGACCTATTTTCAGACCCCTA
CCTCCCCTTTCTTATCCTCTCTTGAATTTGTCCTCTCTTGAATTTGTCCA
GTAAATGAAAAGTACACTTACAGTAGTTTAAGTTGATTTAGTCATAACAT
AAATGTAATTTAGTCTCTTTAGCACCTCTATAACTTATAAACCTTCTTCA
CAAATTTTCCTAACTTCAAACAAATTAGTGTTCGTTTTGCGTGTCCGAGC
TTTGGAGAGACTCCGCTGTGCAAATAATAAAACAACAACAATGTTTAAAA
GTCAAATTATTCCTCTGAATATTATTTGATTAGGTATGAATGCAGCAATA
AGAGCCACGACAAGGATGGCCTTGTATGCTGGTGCTAAAGTCTATGCTGT
TTATTGGGTAAACTTTATGTTTCTATTTGAATCACCATCACCAGAATTGT
GAATTGCCAAGGGCTGATTAGATG Coding sequence (CDS) from alignment at sc0006819:56..929- >TCONS_00045066 ID=TCONS_00045066|Name=TCONS_00045066|organism=Clytia hemisphaerica|type=CDS|length=858bp|location=Sequence derived from alignment at sc0006819:56..929- (Clytia hemisphaerica)
GTATGAATGCAGCAATAAGAGCCACGACAAGGATGGCCTTGTATGCTGGT
GCTAAAGTCTATGCTGTTTATTGGGTAAACTTTATGTTTCTATTTGAATC
ACCATCACCAGAATTGTGAATGATCTGGTTTTTAACCAGTTTCACTACAT
TTTATTTCCAAAAGTTTATCAATGTCATTCGTGTCTTGAATCGAGCTTAT
GTACGAGAAAAGAAAAATGAGTATGAAAATTTGGATTCCAAAATCTCAAC
ATTGAGGTTTGAAAATGAGCCTTCGGTTATGTTTGAAGATGATCTTGTAT
GCGAAGACCAGCCGGATGGAAGCAATCAGTCTAGACGGTCTCGTCTATCA
AGGAAAATGTCGTTTGCAGGTGGTGTAGATGGAACCGGACAATCAATTGC
TATATTGACAAGTGGTGGTGACTCTCAAGGTATGAATGCAGCAATAAGAG
CCACGACAAGGATGGCCTTGTATGCTGGTGCTAAAGTCTATGCTGTTTAT
TGGGTAAACTTTATGTTTCTATTTGAATCACCATCACCAGAATTGTGAAT
GATCTGGTTTTTAACCAGTTTCACTACATTTTATTTCCAAAAGTTTATCA
ATGTCATTCGTGTCTTGAATCGAGCTTATGTACGAGAAAAGAAAAATGAG
TATGAAAATTTGGATTCCAAAATCTCAACATTGAGGTTTGAAAATGAGCC
TTCGGTTATGTTTGAAGATGATCTTGTATGCGAAGACCAGCCGGATGGAA
GCAATCAGTCTAGACGGTCTCGTCTATCAAGGAAAATGTCGTTTGCAGGT
GGTGTAGATGGAACCGGACAATCAATTGCTATATTGACAAGTGGTGGTGA
CTCTCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045066-exon-sc0006819-1575043694:575..929 | TCONS_00045066-exon-sc0006819-1575043694:575..929 | Clytia hemisphaerica | exon |
| TCONS_00045066-exon-sc0006819-1575043694:56..196 | TCONS_00045066-exon-sc0006819-1575043694:56..196 | Clytia hemisphaerica | exon |
| TCONS_00045066-exon-sc0006819-1510915933:575..929 | TCONS_00045066-exon-sc0006819-1510915933:575..929 | Clytia hemisphaerica | exon |
| TCONS_00045066-exon-sc0006819-1510915933:56..196 | TCONS_00045066-exon-sc0006819-1510915933:56..196 | Clytia hemisphaerica | exon |
| TCONS_00045066-exon-sc0006819-1491911889:575..929 | TCONS_00045066-exon-sc0006819-1491911889:575..929 | Clytia hemisphaerica | exon |
| TCONS_00045066-exon-sc0006819-1491911889:56..196 | TCONS_00045066-exon-sc0006819-1491911889:56..196 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006819 | supercontig | sc0006819:56..929 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000023 | Phosphofructokinase_dom |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006096 | glycolytic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003872 | 6-phosphofructokinase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006096 |
glycolytic process |
| molecular_function |
GO:0003872 |
6-phosphofructokinase activity |
Blast
The following BLAST results are available for this feature:
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