TCONS_00045118 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045118
Unique NameTCONS_00045118
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length129

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045118 ID=TCONS_00045118|Name=TCONS_00045118|organism=Clytia hemisphaerica|type=transcript|length=129bp
CTAAATCTTTGTCTTCGGGCGGCCAAAAAATCGGCAAAACTTCTCCTGAA
GAGTGATGAAGAATAGAATAATCTCTCTAAATCATTTTGCTGGTTGTTGT
TTCCGTCATCCTGTGGAACGTCACCTGTT
Run BLAST on NCBI

transcript from alignment at sc0006970:1141..1269

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045118 ID=TCONS_00045118|Name=TCONS_00045118|organism=Clytia hemisphaerica|type=transcript|length=129bp|location=Sequence derived from alignment at sc0006970:1141..1269 (Clytia hemisphaerica)
AACAGGTGACGTTCCACAGGATGACGGAAACAACAACCAGCAAAATGATT
TAGAGAGATTATTCTATTCTTCATCACTCTTCAGGAGAAGTTTTGCCGAT
TTTTTGGCCGCCCGAAGACAAAGATTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028701XLOC_028701Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045118-exon-sc0006970-1491911889:1141..1269TCONS_00045118-exon-sc0006970-1491911889:1141..1269Clytia hemisphaericaexon
TCONS_00045118-exon-sc0006970-1510915933:1141..1269TCONS_00045118-exon-sc0006970-1510915933:1141..1269Clytia hemisphaericaexon
TCONS_00045118-exon-sc0006970-1575043694:1141..1269TCONS_00045118-exon-sc0006970-1575043694:1141..1269Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0006970supercontigsc0006970:1141..1269 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045118 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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