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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045164 ID=TCONS_00045164|Name=TCONS_00045164|organism=Clytia hemisphaerica|type=transcript|length=1056bp
GGTGACAGTTCATCATACACACGAGTCGCTAAAGATGCTCCTTACGGTGT
TTTAAAGCCACTCACTAAATCGGAATGCTACATCCACGTAACGAGACGAA
TGGGGACTGGACTAAGAAAACTTATCAAAGAACACAAgggtaatttttta
tttaacttcaAACTTCGATTTAGAAACATTCTTATAGAAAGTACTGTTCC
TCTTTTTTCTGTTCAATTAACAAAAGAATTCTGTGCTACAATGTTGAACC
AGAAAGCTGTAAACATAGTTTATTCATTGCATAATAGTTCACTCACTCGT
TAGACTTGCAGCAATTAGGAAGCGAAAATTTTTAAGATAAATTTCACCAA
CATGGTAAATACTAGAGCACAGTCTAATAAAATGAAACGAGAACCATCTA
AAAAATCTTctgagaaaaagagaaaaagcgAGAACGAGAAAGTTACCAAG
AGCAAAAGGAAAGTAACTACTggtagaaaatcaaaaaaggcAACAAAGAG
AGGAATACCAAACGTACGACGTTCAAATATGGGAGAAGAACCACTCGACA
TCTGGCAAGCAGAAACAGTTCTAATCAAGGATTTTGAAGATATCGGGTaa
gcaaattaaaaattttatccGATTTTCTCTGATGTATTCTTTTATTCACT
TATATCGAAGTATAATTGAATTATATGCCATAATCTTGAAAATGTCTAGT
GATACGAGTTAAAAAATCGTCAATTATCTAATAATTTTATTCCTTTTCTT
CAACTTCAGGTTTGATGGCCAAATATTCGTGGACAGTCTTAAAGACTCGG
TGGATCAACGAAAATCGAGAAATAAAACGCCGTTACAAATTCGATACTAC
CATTACACGATGTGGGCGATTGAATTGAGGAAGAAAGAAATAGGCCCTAT
TGTCGACGGAGAGGAGCCAAAATACACCTTTCCACCAGTGGTGCTCGCAT
TTTTGAGATCACTAGTACCCGAGGATGTAAAAGGCGAACTTTTTTCAGAA
GCCTATAAGGTTTCTCTGGAAGAATTTTGTACAAGTATTGATGTACCAAG
AATTTA Run BLAST on NCBI transcript from alignment at sc0007118:85..1140 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045164 ID=TCONS_00045164|Name=TCONS_00045164|organism=Clytia hemisphaerica|type=transcript|length=1056bp|location=Sequence derived from alignment at sc0007118:85..1140 (Clytia hemisphaerica)
TAAATTCTTGGTACATCAATACTTGTACAAAATTCTTCCAGAGAAACCTT
ATAGGCTTCTGAAAAAAGTTCGCCTTTTACATCCTCGGGTACTAGTGATC
TCAAAAATGCGAGCACCACTGGTGGAAAGGTGTATTTTGGCTCCTCTCCG
TCGACAATAGGGCCTATTTCTTTCTTCCTCAATTCAATCGCCCACATCGT
GTAATGGTAGTATCGAATTTGTAACGGCGTTTTATTTCTCGATTTTCGTT
GATCCACCGAGTCTTTAAGACTGTCCACGAATATTTGGCCATCAAACCTG
AAGTTGAAGAAAAGGAATAAAATTATTAGATAATTGACGATTTTTTAACT
CGTATCACTAGACATTTTCAAGATTATGGCATATAATTCAATTATACTTC
GATATAAGTGAATAAAAGAATACATCAGAGAAAATCggataaaattttta
atttgcttACCCGATATCTTCAAAATCCTTGATTAGAACTGTTTCTGCTT
GCCAGATGTCGAGTGGTTCTTCTCCCATATTTGAACGTCGTACGTTTGGT
ATTCCTCTCTTTGTTgccttttttgattttctaccAGTAGTTACTTTCCT
TTTGCTCTTGGTAACTTTCTCGTTCTcgctttttctctttttctcagAAG
ATTTTTTAGATGGTTCTCGTTTCATTTTATTAGACTGTGCTCTAGTATTT
ACCATGTTGGTGAAATTTATCTTAAAAATTTTCGCTTCCTAATTGCTGCA
AGTCTAACGAGTGAGTGAACTATTATGCAATGAATAAACTATGTTTACAG
CTTTCTGGTTCAACATTGTAGCACAGAATTCTTTTGTTAATTGAACAGAA
AAAAGAGGAACAGTACTTTCTATAAGAATGTTTCTAAATCGAAGTTtgaa
gttaaataaaaaattacccTTGTGTTCTTTGATAAGTTTTCTTAGTCCAG
TCCCCATTCGTCTCGTTACGTGGATGTAGCATTCCGATTTAGTGAGTGGC
TTTAAAACACCGTAAGGAGCATCTTTAGCGACTCGTGTGTATGATGAACT
GTCACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045164-exon-sc0007118-1491911889:85..1140 | TCONS_00045164-exon-sc0007118-1491911889:85..1140 | Clytia hemisphaerica | exon |
| TCONS_00045164-exon-sc0007118-1510915933:85..1140 | TCONS_00045164-exon-sc0007118-1510915933:85..1140 | Clytia hemisphaerica | exon |
| TCONS_00045164-exon-sc0007118-1575043694:85..1140 | TCONS_00045164-exon-sc0007118-1575043694:85..1140 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0007118 | supercontig | sc0007118:85..1140 . |
Blast
The following BLAST results are available for this feature:
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