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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045167 ID=TCONS_00045167|Name=TCONS_00045167|organism=Clytia hemisphaerica|type=transcript|length=1134bp
ATCTGCATCAACTGGCATCAAAGCATTATCTTCCACTGAACGTCTTCGTC
GTCTGCTATTCACATCACAACCGAATTGACAAGATACAAGATACAAATGG
TTGCCAACCAAAAAACATTCATGTTTCTCGAGTTCATCACAGTGGAACAG
TAGTGTCAAGGTCGTGGTAAGAAACAGCTTAAGAAACCAACAACTTCTAC
TGTGATGAACTCGAGAAACATGAATGTTTTTTGGTTGGCAACCATTTGTA
TCTTGTATTTCTCAGTCATCGTTCAAGCCGAATCAAACTTCACAATAGAA
TGTGACACACAAAAGATGACTATTTACATTTTGAAAGACACTATTTCAGT
CCCTGAAAGTGATCTTTCTCAATACAACATATCATGGAATGATCCTACTT
GTGGACCAAgtgaaaaatccaatgaaacataTTTGATTTTGGAGGCTGGT
TATTCTTCATGTGGAACTCGGGCTTTCGACGCTGGAAATGACGTCACATT
CAAAAACCAGGTTTCGGTCAACTTAAATACTACAAACGCATACAAAAACG
ATCTATTGGAAAGGATCGATACCTTTGCAACATATTCTGTTGAATGCAAC
GTCCCACAAGGAGTGAATGTTACACACGAACATGGAGCCAATATCACCAA
AACTGATTTGGTCGAAGGAGTATCGAGTTCGACTGATCAATTTACTGTCT
CGATGAATCTTCATGAAAACACAAAATTCAATGAAACTTTGAAATATCCT
GCCGTCATTGATAGATTGGGACGTTTTAATTTGGAAATAGAAATTGACAC
TGTTGCTAACCTGTTTATTATTCCACGAAACTGCCATGGTACTTCAACTT
CAAATCGAGATGATGTCATTCGGGAAGCTCTTGTTACTGACGGATGTCCC
AATGCTGaccatgttttcaaaaaagaaaccgCAGCTGATAATGGAAAGAA
ATTCCGATTTTCATTGAACGTATTCCGATTCAAAAACTCGAATGGTATGG
TCTACATTCATTGCTCAGCTCACGTCTGCTTGGAAGGAAGTAATGCCACA
AAATGTCAATTCGGTTGTGATGTGAATAGCAGACGACGAAGACGTTCAGT
GGAAGATAATGCTTTGATGCCAGTTGATGCAGAT Run BLAST on NCBI protein sequence of TCONS_00045167-protein >TCONS_00045167-protein ID=TCONS_00045167-protein|Name=TCONS_00045167-protein|organism=Clytia hemisphaerica|type=polypeptide|length=310bp
MNSRNMNVFWLATICILYFSVIVQAESNFTIECDTQKMTIYILKDTISVP
ESDLSQYNISWNDPTCGPSEKSNETYLILEAGYSSCGTRAFDAGNDVTFK
NQVSVNLNTTNAYKNDLLERIDTFATYSVECNVPQGVNVTHEHGANITKT
DLVEGVSSSTDQFTVSMNLHENTKFNETLKYPAVIDRLGRFNLEIEIDTV
ANLFIIPRNCHGTSTSNRDDVIREALVTDGCPNADHVFKKETAADNGKKF
RFSLNVFRFKNSNGMVYIHCSAHVCLEGSNATKCQFGCDVNSRRRRRSVE
DNALMPVDAD Run BLAST on NCBI transcript from alignment at sc0007123:5..1138 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045167 ID=TCONS_00045167|Name=TCONS_00045167|organism=Clytia hemisphaerica|type=transcript|length=1134bp|location=Sequence derived from alignment at sc0007123:5..1138 (Clytia hemisphaerica)
ATCTGCATCAACTGGCATCAAAGCATTATCTTCCACTGAACGTCTTCGTC
GTCTGCTATTCACATCACAACCGAATTGACATTTTGTGGCATTACTTCCT
TCCAAGCAGACGTGAGCTGAGCAATGAATGTAGACCATACCATTCGAGTT
TTTGAATCGGAATACGTTCAATGAAAATCGGAATTTCTTTCCATTATCAG
CTGcggtttcttttttgaaaacatggtCAGCATTGGGACATCCGTCAGTA
ACAAGAGCTTCCCGAATGACATCATCTCGATTTGAAGTTGAAGTACCATG
GCAGTTTCGTGGAATAATAAACAGGTTAGCAACAGTGTCAATTTCTATTT
CCAAATTAAAACGTCCCAATCTATCAATGACGGCAGGATATTTCAAAGTT
TCATTGAATTTTGTGTTTTCATGAAGATTCATCGAGACAGTAAATTGATC
AGTCGAACTCGATACTCCTTCGACCAAATCAGTTTTGGTGATATTGGCTC
CATGTTCGTGTGTAACATTCACTCCTTGTGGGACGTTGCATTCAACAGAA
TATGTTGCAAAGGTATCGATCCTTTCCAATAGATCGTTTTTGTATGCGTT
TGTAGTATTTAAGTTGACCGAAACCTGGTTTTTGAATGTGACGTCATTTC
CAGCGTCGAAAGCCCGAGTTCCACATGAAGAATAACCAGCCTCCAAAATC
AAAtatgtttcattggatttttcacTTGGTCCACAAGTAGGATCATTCCA
TGATATGTTGTATTGAGAAAGATCACTTTCAGGGACTGAAATAGTGTCTT
TCAAAATGTAAATAGTCATCTTTTGTGTGTCACATTCTATTGTGAAGTTT
GATTCGGCTTGAACGATGACTGAGAAATACAAGATACAAATGGTTGCCAA
CCAAAAAACATTCATGTTTCTCGAGTTCATCACAGTAGAAGTTGTTGGTT
TCTTAAGCTGTTTCTTACCACGACCTTGACACTACTGTTCCACTGTGATG
AACTCGAGAAACATGAATGTTTTTTGGTTGGCAACCATTTGTATCTTGTA
TCTTGTCAATTCGGTTGTGATGTGAATAGCAGACGACGAAGACGTTCAGT
GGAAGATAATGCTTTGATGCCAGTTGATGCAGAT Coding sequence (CDS) from alignment at sc0007123:5..1138 >TCONS_00045167 ID=TCONS_00045167|Name=TCONS_00045167|organism=Clytia hemisphaerica|type=CDS|length=930bp|location=Sequence derived from alignment at sc0007123:5..1138 (Clytia hemisphaerica)
ATCTGCATCAACTGGCATCAAAGCATTATCTTCCACTGAACGTCTTCGTC
GTCTGCTATTCACATCACAACCGAATTGACATTTTGTGGCATTACTTCCT
TCCAAGCAGACGTGAGCTGAGCAATGAATGTAGACCATACCATTCGAGTT
TTTGAATCGGAATACGTTCAATGAAAATCGGAATTTCTTTCCATTATCAG
CTGcggtttcttttttgaaaacatggtCAGCATTGGGACATCCGTCAGTA
ACAAGAGCTTCCCGAATGACATCATCTCGATTTGAAGTTGAAGTACCATG
GCAGTTTCGTGGAATAATAAACAGGTTAGCAACAGTGTCAATTTCTATTT
CCAAATTAAAACGTCCCAATCTATCAATGACGGCAGGATATTTCAAAGTT
TCATTGAATTTTGTGTTTTCATGAAGATTCATCGAGACAGTAAATTGATC
AGTCGAACTCGATACTCCTTCGACCAAATCAGTTTTGGTGATATTGGCTC
CATGTTCGTGTGTAACATTCACTCCTTGTGGGACGTTGCATTCAACAGAA
TATGTTGCAAAGGTATCGATCCTTTCCAATAGATCGTTTTTGTATGCGTT
TGTAGTATTTAAGTTGACCGAAACCTGGTTTTTGAATGTGACGTCATTTC
CAGCGTCGAAAGCCCGAGTTCCACATGAAGAATAACCAGCCTCCAAAATC
AAAtatgtttcattggatttttcacTTGGTCCACAAGTAGGATCATTCCA
TGATATGTTGTATTGAGAAAGATCACTTTCAGGGACTGAAATAGTGTCTT
TCAAAATGTAAATAGTCATCTTTTGTGTGTCACATTCTATTGTGAAGTTT
GATTCGGCTTGAACGATGACTGAGAAATACAAGATACAAATGGTTGCCAA
CCAAAAAACATTCATGTTTCTCGAGTTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045167-exon-sc0007123-1491911889:5..1138 | TCONS_00045167-exon-sc0007123-1491911889:5..1138 | Clytia hemisphaerica | exon |
| TCONS_00045167-exon-sc0007123-1510915933:5..1138 | TCONS_00045167-exon-sc0007123-1510915933:5..1138 | Clytia hemisphaerica | exon |
| TCONS_00045167-exon-sc0007123-1575043694:5..1138 | TCONS_00045167-exon-sc0007123-1575043694:5..1138 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0007123 | supercontig | sc0007123:5..1138 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
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| IPR001507 | ZP_dom |
Blast
The following BLAST results are available for this feature:
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