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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045169 ID=TCONS_00045169|Name=TCONS_00045169|organism=Clytia hemisphaerica|type=transcript|length=1084bp
aatacacgcttttttttataagaatggtgtaaatccattgtaattgacaa
tttgataaatgacaaatgctttaaaaattgcattcttaGCATGAGtggca
aaattccatgatggtgatattcttagcatattcttaattttttggccatt
ttcatcatggacattcttataaagtgtattcttataaaaaagcgNggcca
ttttcatcatggacattcttataaagtgtattcttataaaaaagcgctGA
AAACGATTTAACTCTTCAAGCACTAATTAAAATCTTTGTTCACTCCCACT
CCCGGAGATACAAACAATAGTATGGGTTAATAACTTCAGCATTTTACAAA
CCATGACGATAAAATGGGAGGGTCATTCGGGCGAAGAGGCTTTCCAGGGT
GTTCCAGGGCCATAAACACACGAAGAGTTAAATTTTGTACCTAACATGAA
CAGTAATTTAAATTTACGAATGAATATTTGCTAAGGCTACGTTCAGATGT
CGAAAATCGTTGTTTACTCAGATCCTTACTACATGTTGTGTCAATAAAAA
ATGTACGGTCCCAATTTTTCTGAACAGTACTGAACGAAAACCTTGCATCG
GATTGTTTAACGATTCATAAAAATCCTtattcatttaaaaagaaactccC
GATTTTACATTAAAACATTCTTATTTCTCTAACGCAATATCATCTAGCAT
CTCATTCAGtatcttgttgttttttcttcgaTTATGCCATCTTCAAGCAc
accgatttttttttttgaaaattgttctaATCTCTTATTCCGTCATGGTA
TTTCTCCGTCGAATGTCTAACACACCTTGATCCATTTTCTCCTCTCTTTG
tggcaacaacaaaaaaaaacaaaaaccaaaaccaaaactCCAAAGAAGTA
TGATGGGGTACAAGAAAAATGGGTTATGCGGTTTTTTTTGTACgtcgttt
tttttaaattcacttTATGTTTCGTTTGAGGAGGAAAGAGGGGTTGGGTT
CTCCATCATATACTATACTTCAAGGTTTCGTAACTTCAGTGTTTCGACTA
ATGTGGAAATGTACGCATAGCCAATTGGAGCCTT Run BLAST on NCBI transcript from alignment at sc0007127:2..1144+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045169 ID=TCONS_00045169|Name=TCONS_00045169|organism=Clytia hemisphaerica|type=transcript|length=1143bp|location=Sequence derived from alignment at sc0007127:2..1144+ (Clytia hemisphaerica)
aatacacgcttttttttataagaatggtgtaaatccattgtaattgacaa
tttgataaatgacaaatgctttaaaaattgcattcttaGCATGAGtggca
aaattccatgatggtgatattcttagcatattcttaattttttggccatt
ttcatcatggacattcttataaagtgtattcttataaaaaagcgNggcca
ttttcatcatggacattcttataaagtgtattcttataaaaaagcgctGA
AAACGATTTAACTCTTCAAGCACTAATTAAAATCTTTGTTCACTCCCACT
CCCGGAGATACAAACAATAGTATGGGTTAATAACTTCAGCATTTTACAAA
CCATGACGATAAAATGGGAGGGTCATTCGGGCGAAGAGGCTTTCCAGGGT
GTTCCAGGGCCATAAACACACGAAGAGTTAAATTTTGTACCTAACATGAA
CAGTAATTTAAATTTACGAATGAATATTTGCTAAGGCTACGTTCAGATGT
CGAAAATCGTTGTTTACTCAGATCCTTACTACATGTTGTGTCAATAAAAA
ATGTACGGTCCCAATTTTTCTGAACAGTACTGAACGAAAACCTTGCATCG
GATTGTTTAACGATTCATAAAAATCCTtattcatttaaaaagaaactccC
GATTTTACATTAAAACATTCTTATTTCTCTAACGCAATATCATCTAGCAT
CNAACTCCCGATTTTACATTAAAACATTCTTATTTCTCTAACGCAATATC
ATCTAGCATCTCATTCAGtatcttgttgttttttcttcgaTTATGCCATC
TTCAAGCAcaccgatttttttttttgaaaattgttctaATCTCTTATTCC
GTCATGGTATTTCTCCGTCGAATGTCTAACACACCTTGATCCATTTTCTC
CTCTCTTTGtggcaacaacaaaaaaaaacaaaaaccaaaaccaaaactCC
AAAGAAGTATGATGGGGTACAAGAAAAATGGGTTATGCGGTTTTTTTTGT
ACgtcgttttttttaaattcacttTATGTTTCGTTTGAGGAGGAAAGAGG
GGTTGGGTTCTCCATCATATACTATACTTCAAGGTTTCGTAACTTCAGTG
TTTCGACTAATGTGGAAATGTACGCATAGCCAATTGGAGCCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045169-exon-sc0007127-1491911889:2..659 | TCONS_00045169-exon-sc0007127-1491911889:2..659 | Clytia hemisphaerica | exon |
| TCONS_00045169-exon-sc0007127-1510915933:2..659 | TCONS_00045169-exon-sc0007127-1510915933:2..659 | Clytia hemisphaerica | exon |
| TCONS_00045169-exon-sc0007127-1575043694:2..659 | TCONS_00045169-exon-sc0007127-1575043694:2..659 | Clytia hemisphaerica | exon |
| TCONS_00045169-exon-sc0007127-1491911889:719..1144 | TCONS_00045169-exon-sc0007127-1491911889:719..1144 | Clytia hemisphaerica | exon |
| TCONS_00045169-exon-sc0007127-1510915933:719..1144 | TCONS_00045169-exon-sc0007127-1510915933:719..1144 | Clytia hemisphaerica | exon |
| TCONS_00045169-exon-sc0007127-1575043694:719..1144 | TCONS_00045169-exon-sc0007127-1575043694:719..1144 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0007127 | supercontig | sc0007127:2..1144 + |
Blast
The following BLAST results are available for this feature:
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