TCONS_00045190 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045190
Unique NameTCONS_00045190
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length186

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045190 ID=TCONS_00045190|Name=TCONS_00045190|organism=Clytia hemisphaerica|type=transcript|length=186bp
GACCGATCCTTTCCTTGCATGCAGGTTTTGATAAAAACGACTGATAGTTT
ATTTTAATGCAACATTTTCGATTCCGTCATTTCAGCGACAAATTTAGTTT
GTGAAAGCGAGGAAGGAAAAAATCGCTCTTTATCGCTTTATTCAACCACC
AAAATGTCCATCAGCAACCTCATCCTTAGATTACAG
Run BLAST on NCBI

transcript from alignment at sc0007164:33..218

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045190 ID=TCONS_00045190|Name=TCONS_00045190|organism=Clytia hemisphaerica|type=transcript|length=186bp|location=Sequence derived from alignment at sc0007164:33..218 (Clytia hemisphaerica)
CTGTAATCTAAGGATGAGGTTGCTGATGGACATTTTGGTGGTTGAATAAA
GCGATAAAGAGCGATTTTTTCCTTCCTCGCTTTCACAAACTAAATTTGTC
GCTGAAATGACGGAATCGAAAATGTTGCATTAAAATAAACTATCAGTCGT
TTTTATCAAAACCTGCATGCAAGGAAAGGATCGGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028773XLOC_028773Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045190-exon-sc0007164-1491911889:33..218TCONS_00045190-exon-sc0007164-1491911889:33..218Clytia hemisphaericaexon
TCONS_00045190-exon-sc0007164-1510915933:33..218TCONS_00045190-exon-sc0007164-1510915933:33..218Clytia hemisphaericaexon
TCONS_00045190-exon-sc0007164-1575043694:33..218TCONS_00045190-exon-sc0007164-1575043694:33..218Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0007164supercontigsc0007164:33..218 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045190 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top