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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045379 ID=TCONS_00045379|Name=TCONS_00045379|organism=Clytia hemisphaerica|type=transcript|length=801bp
GTGGCGCAATCGGCAGCGCACCAGACTTCTAATCCAGAGGTCGCAGTTCG
AACCCCGTTCGGAAccaaaacatcaacaaaaacaaaaacgaatGGAGAAT
CAAAGACACCATCCAAATCATTTGAAGGAAACAAATTCAGAACCATCGGA
AACTACAAAAAGAATTCACCGGAAAATAACTTTAACAAATTCATTTCAAC
AAGATCAAAGTACTTCCTTCAAGGACCATCTAACACCGTCACAAAGGTTA
NCAGAACCATCGCAAACTACAAAAAGAATTCACCGGAAAATAACTTTAAC
AAATTCATTTCAACAAGATCAAAGTACTTCCTTCAAGGACCATCTAACAC
CGTCACAAAGGTTAGTGAAGCTTTGGAGACTAAATACTTTTATGGCCATA
TTGCTTGGTCCTTCTTTCTTGATGAACATGAATGGGCAGCAATGATGTTT
CGATTAAATATAATGAGACAAGACAATAAATTTCAAGAGTTAAACTATAG
TCTCTTCGCTGATGGTTACATACATTATTGTGATAATTATGCTCCATCAG
ACTTTAGAAGCTACAAATGCGAAGCACAAATAGAACATTTTATCAAAGTT
GTTGTATCACGTTGGACAGAATTCAAAGACACAAAGTCATTGATAAATAA
ACCATACCCAAGTGATAAAAACTGGGCAATTTGGCGTTGGAATAAAGGTC
TTTATTTCATATgaattgcctaaatatttctATAGCTACACGAGTACCAG
ACAGGACCTGACTGGGGCACTGAGGTCTtcgttttctttggtttttgagG
G Run BLAST on NCBI protein sequence of TCONS_00045379-protein >TCONS_00045379-protein ID=TCONS_00045379-protein|Name=TCONS_00045379-protein|organism=Clytia hemisphaerica|type=polypeptide|length=237bp
VAQSAAHQTSNPEVAVRTPFGTKTSTKTKTNGESKTPSKSFEGNKFRTIG
NYKKNSPENNFNKFISTRSKYFLQGPSNTVTKVXRTIANYKKNSPENNFN
KFISTRSKYFLQGPSNTVTKVSEALETKYFYGHIAWSFFLDEHEWAAMMF
RLNIMRQDNKFQELNYSLFADGYIHYCDNYAPSDFRSYKCEAQIEHFIKV
VVSRWTEFKDTKSLINKPYPSDKNWAIWRWNKGLYFI Run BLAST on NCBI transcript from alignment at sc0007660:1..801 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045379 ID=TCONS_00045379|Name=TCONS_00045379|organism=Clytia hemisphaerica|type=transcript|length=801bp|location=Sequence derived from alignment at sc0007660:1..801 (Clytia hemisphaerica)
CCctcaaaaaccaaagaaaacgaAGACCTCAGTGCCCCAGTCAGGTCCTG
TCTGGTACTCGTGTAGCTATagaaatatttaggcaattcATATGAAATAA
AGACCTTTATTCCAACGCCAAATTGCCCAGTTTTTATCACTTGGGTATGG
TTTATTTATCAATGACTTTGTGTCTTTGAATTCTGTCCAACGTGATACAA
CAACTTTGATAAAATGTTCTATTTGTGCTTCGCATTTGTAGCTTCTAAAG
TCTGATGGAGCATAATTATCACAATAATGTATGTAACCATCAGCGAAGAG
ACTATAGTTTAACTCTTGAAATTTATTGTCTTGTCTCATTATATTTAATC
GAAACATCATTGCTGCCCATTCATGTTCATCAAGAAAGAAGGACCAAGCA
ATATGGCCATAAAAGTATTTAGTCTCCAAAGCTTCACTAACCTTTGTGAC
GGTGTTAGATGGTCCTTGAAGGAAGTACTTTGATCTTGTTGAAATGAATT
TGTTAAAGTTATTTTCCGGTGAATTCTTTTTGTAGTTTGCGATGGTTCTG
NTAACCTTTGTGACGGTGTTAGATGGTCCTTGAAGGAAGTACTTTGATCT
TGTTGAAATGAATTTGTTAAAGTTATTTTCCGGTGAATTCTTTTTGTAGT
TTCCGATGGTTCTGAATTTGTTTCCTTCAAATGATTTGGATGGTGTCTTT
GATTCTCCattcgtttttgtttttgttgatgttttggTTCCGAACGGGGT
TCGAACTGCGACCTCTGGATTAGAAGTCTGGTGCGCTGCCGATTGCGCCA
C Coding sequence (CDS) from alignment at sc0007660:1..801 >TCONS_00045379 ID=TCONS_00045379|Name=TCONS_00045379|organism=Clytia hemisphaerica|type=CDS|length=714bp|location=Sequence derived from alignment at sc0007660:1..801 (Clytia hemisphaerica)
tcATATGAAATAAAGACCTTTATTCCAACGCCAAATTGCCCAGTTTTTAT
CACTTGGGTATGGTTTATTTATCAATGACTTTGTGTCTTTGAATTCTGTC
CAACGTGATACAACAACTTTGATAAAATGTTCTATTTGTGCTTCGCATTT
GTAGCTTCTAAAGTCTGATGGAGCATAATTATCACAATAATGTATGTAAC
CATCAGCGAAGAGACTATAGTTTAACTCTTGAAATTTATTGTCTTGTCTC
ATTATATTTAATCGAAACATCATTGCTGCCCATTCATGTTCATCAAGAAA
GAAGGACCAAGCAATATGGCCATAAAAGTATTTAGTCTCCAAAGCTTCAC
TAACCTTTGTGACGGTGTTAGATGGTCCTTGAAGGAAGTACTTTGATCTT
GTTGAAATGAATTTGTTAAAGTTATTTTCCGGTGAATTCTTTTTGTAGTT
TGCGATGGTTCTGNTAACCTTTGTGACGGTGTTAGATGGTCCTTGAAGGA
AGTACTTTGATCTTGTTGAAATGAATTTGTTAAAGTTATTTTCCGGTGAA
TTCTTTTTGTAGTTTCCGATGGTTCTGAATTTGTTTCCTTCAAATGATTT
GGATGGTGTCTTTGATTCTCCattcgtttttgtttttgttgatgttttgg
TTCCGAACGGGGTTCGAACTGCGACCTCTGGATTAGAAGTCTGGTGCGCT
GCCGATTGCGCCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045379-exon-sc0007660-1491911889:1..801 | TCONS_00045379-exon-sc0007660-1491911889:1..801 | Clytia hemisphaerica | exon |
| TCONS_00045379-exon-sc0007660-1510915933:1..801 | TCONS_00045379-exon-sc0007660-1510915933:1..801 | Clytia hemisphaerica | exon |
| TCONS_00045379-exon-sc0007660-1575043694:1..801 | TCONS_00045379-exon-sc0007660-1575043694:1..801 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0007660 | supercontig | sc0007660:1..801 . |
Blast
The following BLAST results are available for this feature:
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