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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045656 ID=TCONS_00045656|Name=TCONS_00045656|organism=Clytia hemisphaerica|type=transcript|length=1191bp
tttaaGGTCAAATTCTGTTTCACTTCGATGCTGTCCAAGCAAACCATTTG
ACATTCTCCGATCACTggaatcatgtgtttgattgtCCACTTGTTGTGAA
GATACAACATTCGACAACTTGCGCTCCTGGTTTTGCTGTGAAGTTCTACG
TTTTGGTTTTGTTGCAACTGGAGGCGGAACGCTAGTGCGTTCATTATTTG
GTTTTGTTCTGATTGACTGTGCTGTAGTTTGCAGCTCTGGGTTGCTTAGT
GGTGAGGGGTTTTGTGGTAAACTGTCAATTGAAGAAGTGTTATTAAAATT
GAAATCATCAGTGCTCTCTGTAGGTTGTTTCGATGATGAGGGTTGTGGTT
CACTATGGTTTACTAACATATTCGGTAAATTTTCACTTGTATTTGTGTTT
GATGATTCCTCTGATGATTCTATAGGTTGTTTCTTGTGTTCAGAGGCTGA
TTGTGTAGGAGAAATCGACCCGTTTGTCAAAAATGGACTGGATGAAGAAA
GACCATTACAAACAGTCAGTTCTAGAATCTCcgaacaaatttcaaatttt
tgtacaaaatcaACTTTGCAAGGACTGGCTGAAGGTTCAGTTCTTTCCTG
ACCATGGAAAAGTTTCACCATGTCAATTGATTGacttttcaaatcatttt
gGATACTTTCGTCGAATTTCTGAAGATCACTATAGTTCAAGGTCTTTAAA
ATGTATCTCAAAGTTGTGAGCATATCATGATAATGATCTCCTGCTTCATC
AATCTtcaacattttgattttctcatGTATCCAACGAGACCAAAGGACCA
TACCAGATAAAGAATCGTCATCAGGCAAAGGCTTTTGTTGATCCCATCCT
TCTAATGGAGTAGGAATTGACAAAATATGAATAATAACATCAATAACAAG
GGCTATACTCCATTGTTCGAGGTTTGTAAAACCCTCTTTAGGGCACAAAA
TATCCCAATCAATAAAATCCTTCAAATAAGATTCTCTTGTTCTACGAAAT
TGCATAAGATATTGTCGAAGGAGATCTTGATTTGTGGGTAGTCCAACATA
AGTTGAATTTCCATGTTTGTTGAAAAGGAGTTCAAATAACACAGCTTTCA
GATGGATTTCTAAAGCAAGATTCAATTTGATCCAATATTCAGCATTTTGT
TTGACAATACCATTTGGTGTGCTCATGTTATGTTTTACtgc Run BLAST on NCBI transcript from alignment at scaffold_100:223997..225260+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045656 ID=TCONS_00045656|Name=TCONS_00045656|organism=Clytia hemisphaerica|type=transcript|length=1264bp|location=Sequence derived from alignment at scaffold_100:223997..225260+ (Clytia hemisphaerica)
tttaaGGTCAAATTCTGTTTCACTTCGATGCTGTCCAAGCAAACCATTTG
ACATTCTCCGATCACTggaatcatgtgtttgattgtCCACTTGTTGTGAA
GATACAACATTCGACAACTTGCGCTCCTGGTTTTGCTGTGAAGTTCTACG
TTTTGGTTTTGTTGCAACTGGAGGCGGAACCCTAGTGCGTTCNGCGCTCC
TGGTTTTGCTGTGAAGTTCTACGTTTTGGTTTTGTTGCAACTGGAGGCGG
AACGCTAGTGCGTTCATTATTTGGTTTTGTTCTGATTGACTGTGCTGTAG
TTTGCAGCTCTGGGTTGCTTAGTGGTGAGGGGTTTTGTGGTAAACTGTCA
ATTGAAGAAGTGTTATTAAAATTGAAATCATCAGTGCTCTCTGTAGGTTG
TTTCGATGATGAGGGTTGTGGTTCACTATGGTTTACTAACATATTCGGTA
AATTTTCACTTGTATTTGTGTTTGATGATTCCTCTGATGATTCTATAGGT
TGTTTCTTGTGTTCAGAGGCTGATTGTGTAGGAGAAATCGACCCGTTTGT
CAAAAATGGACTGGATGAAGAAAGACCATTACAAACAGTCAGTTCTAGAA
TCTCcgaacaaatttcaaatttttgtacaaaatcaACTTTGCAAGGACTG
GCTGAAGGTTCAGTTCTTTCCTGACCATGGAAAAGTTTCACCATGTCAAT
TGATTGacttttcaaatcattttgGATACTTTCGTCGAATTTCTGAAGAT
CACTATAGTTCAAGGTCTTTAAAATGTATCTCAAAGTTGTGAGCATATCA
TGATAATGATCTCCTGCTTCATCAATCTtcaacattttgattttctcatG
TATCCAACGAGACCAAAGGACCATACCAGATAAAGAATCGTCATCAGGCA
AAGGCTTTTGTTGATCCCATCCTTCTAATGGAGTAGGAATTGACAAAATA
TGAATAATAACATCAATAACAAGGGCTATACTCCATTGTTCGAGGTTTGT
AAAACCCTCTTTAGGGCACAAAATATCCCAATCAATAAAATCCTTCAAAT
AAGATTCTCTTGTTCTACGAAATTGCATAAGATATTGTCGAAGGAGATCT
TGATTTGTGGGTAGTCCAACATAAGTTGAATTTCCATGTTTGTTGAAAAG
GAGTTCAAATAACACAGCTTTCAGATGGATTTCTAAAGCAAGATTCAATT
TGATCCAATATTCAGCATTTTGTTTGACAATACCATTTGGTGTGCTCATG
TTATGTTTTACtgc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045656-exon-scaffold_100-1491911889:223997..224169 | TCONS_00045656-exon-scaffold_100-1491911889:223997..224169 | Clytia hemisphaerica | exon |
| TCONS_00045656-exon-scaffold_100-1510915933:223997..224169 | TCONS_00045656-exon-scaffold_100-1510915933:223997..224169 | Clytia hemisphaerica | exon |
| TCONS_00045656-exon-scaffold_100-1575043694:223997..224169 | TCONS_00045656-exon-scaffold_100-1575043694:223997..224169 | Clytia hemisphaerica | exon |
| TCONS_00045656-exon-scaffold_100-1491911889:224243..225260 | TCONS_00045656-exon-scaffold_100-1491911889:224243..225260 | Clytia hemisphaerica | exon |
| TCONS_00045656-exon-scaffold_100-1510915933:224243..225260 | TCONS_00045656-exon-scaffold_100-1510915933:224243..225260 | Clytia hemisphaerica | exon |
| TCONS_00045656-exon-scaffold_100-1575043694:224243..225260 | TCONS_00045656-exon-scaffold_100-1575043694:224243..225260 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_100 | supercontig | scaffold_100:223997..225260 + |
Blast
The following BLAST results are available for this feature:
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