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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045668 ID=TCONS_00045668|Name=TCONS_00045668|organism=Clytia hemisphaerica|type=transcript|length=1457bp
AAACACGAAGATGAAGAGTGCAAGGTGCCATGCGATTATTGGCAATATGG
TTGCCATGAAATGaTTCACAAACGGCACATGGAGCGTCACCTTGCCAATT
CAGCAAGACGACATATCGAACTTGTTAAAGCTTATTATGACAGAATTGTT
GCCGAAAAAGAAAAACGACTGGTCATGAAGAATAAGGCAATTGCCGAAAA
AGACAAATTACTCGGCGAAAAAAATAGCTCATTGGTCGAAAAAGACAAAT
CATTGGCCGAAAAAGATAAGTTATTGGTCGGAAAAGACGAATCTTTGACC
GAAAAAAATCGATTATTGGCGGAGAAGGACAAATCATTGGCCGAAAAAGA
TAAGTTATTGGTCGAAAAAGACGAATCTTTGACCGAAAAAAATAGATCAT
TGGCGGAGAAGGACAAATCATTGGCCGAAAAAAATAGATCATTGGCGGAG
AAGGAAAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGG
ACAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACAA
ATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACAAATCA
TTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACAAATCATTGG
CCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACAAATCATTGGCCGA
AAAAAATCGATCGATTATTGGCGGAGAAGGACAAAGAGATTGGATTGAAC
ACGACGATTGTTTTACAAAGCGAACGCATTACGGAGCTTGAAGGGAATAA
AATACCAATAGCCACAGGAGGATCTAAACCCACCGAGAAACAACAGGTAA
CAAAACCAAAACCACTTCCAAGAACGGGAATTCAACTTTATGACAGTCAA
GAACAAGTCACACCAAAGCCTGCCCAACCAACAACAACCAAATGGGACGG
AAAGAAAATTCATGAGATAGTGTTCCAGGGTAAAAGGCTGTCGTTTGATG
atgtttggaaaattttgagcgaaaagaatttcacgaaattcgaagaaatt
ttCCAACAAAATCCGAACATCGTCAACTCGTTGCGTGATAGTTTTGATCA
GACACTTCTCATGAAGGCTGTTTATGAAGATCGTTTCGACGTTTTCGTTC
ACTTGATGGATTATCCTCATGATTTTTCACTCGTGGACAATGATGGTGAG
AACGTTCTTCATTTTGTTGGTTCGCATGGAACAGTTCGTTATTTGGAAAA
GTTTGATCAACAAACCATCAAAATGTTGATCAATGGAAGAGACAAATCGA
ACAACGACACACCATTGCATTATGCAGCAAGTTGGAACaaacatgacgtc
atcagatggtTGTTGGCCAAAGGAGCGAATCCAGAATTGAAAAACAATCG
TGGTCAACGCCCTGATGAACGTGGATGTTGTGATGGTGTTACCAAAGAAA
TCTTTCG Run BLAST on NCBI protein sequence of TCONS_00045668-protein >TCONS_00045668-protein ID=TCONS_00045668-protein|Name=TCONS_00045668-protein|organism=Clytia hemisphaerica|type=polypeptide|length=485bp
KHEDEECKVPCDYWQYGCHEMIHKRHMERHLANSARRHIELVKAYYDRIV
AEKEKRLVMKNKAIAEKDKLLGEKNSSLVEKDKSLAEKDKLLVGKDESLT
EKNRLLAEKDKSLAEKDKLLVEKDESLTEKNRSLAEKDKSLAEKNRSLAE
KEKSLAEKNRSIIGGEGQIIGRKKSIDYWRRRTNHWPKKIDRLLAEKDKS
LAEKNRSIIGGEGQIIGRKKSIDYWRRRTNHWPKKIDRLLAEKDKEIGLN
TTIVLQSERITELEGNKIPIATGGSKPTEKQQVTKPKPLPRTGIQLYDSQ
EQVTPKPAQPTTTKWDGKKIHEIVFQGKRLSFDDVWKILSEKNFTKFEEI
FQQNPNIVNSLRDSFDQTLLMKAVYEDRFDVFVHLMDYPHDFSLVDNDGE
NVLHFVGSHGTVRYLEKFDQQTIKMLINGRDKSNNDTPLHYAASWNKHDV
IRWLLAKGANPELKNNRGQRPDERGCCDGVTKEIF Run BLAST on NCBI transcript from alignment at scaffold_100:286693..296254+ Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045668 ID=TCONS_00045668|Name=TCONS_00045668|organism=Clytia hemisphaerica|type=transcript|length=9562bp|location=Sequence derived from alignment at scaffold_100:286693..296254+ (Clytia hemisphaerica)
AAACACGAAGATGAAGAGTGCAAGGTGCCATGCGATTATTGGCAATATGG
TTGCCATGAAATGGTATACGACCTAGTGTCTGTATTGTCTAGCTAAATCA
GCTTtaaaaagaaactgaaaaaatgaAGCACTAGTGATGGAGCATAGTGA
AAACCAAATTATTTCCAGGACGGGACCCTACCTTTTTAAGGATAATTTCA
AAATCAGTAAGGGACAAATTCTTTAGAATTTCAGAGAGAATTTCACAtgg
tttcgttttttttctagaTTCACAAACGGCACATGGAGCGTCACCTTGCC
AATTCAGCAAGACGACATATCGAACTTGTTAAAGCTTATTATGACAGAAT
TGTTGCCGAAAAAGAAAAACGACTGGTCATGAAGAATAAGGCAATTGCCG
AAAAAGACAAATTACTCGGCGAAAAAAATAGCTCATTGGTCGAAAAAGAC
AAATCATTGGCCGAAAAAGATAAGTTATTGGTCGGAAAAGACGAATCTTT
GACCGAAAAAAATCGATTATTGGCGGAGAAGGACAAATCATTGGCCGAAA
AAGATAAGTTATTGGTCGAAAAAGACGAATCTTTGACCGAAAAAAATAGA
TCATTGGCGGAGAAGGACAAATCATTGGCCGAAAAAAATAGATCATTGGC
GGAGAAGGAAAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAG
AAGGACAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGG
ACAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACAA
ATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACAAATCA
TTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACAAATCATTGG
CCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACAAAGAGATTGGATT
GAACACGACGATTGTTTTACAAAGCGAACGCATTACGGAGCTTGAAGGGA
ATAAAATACCAATAGCCACAGGAGGATCTAAGTATATTTACTTCTTATAG
CTGCATACTAAAAATGCAGGGTTGTATCATTTCGTCTCTTTAATTAACAG
ACTACATTTTAAAGATCGGAAACTTTTCCCACTTATTCTGGCTTTGGGAT
AGacttacaaattttgaaaaaccatGAAAAACCTATAACAAAATCTATcg
agaaataaagaactaactCACAAGGCGTTTCATGCTGGCGCAATCTTTAG
GCAGTGCAAAGTATCGTAAATTTTAATTCAACCTGACAGTCTAGTTAGAC
TGGAATCATTGAAATACGTAATACTGGTGTCATATCTTTTAAAGTATAAT
GGTAATTTGCAGCCTTTGCATAACTTTCTCTATTTAACTTAgattaggct
acgtcatatctgccttcgtttcgagcgtaaaactcctactcttcgtaaga
gtaaggcctaaaagcctagatctgtctattgtgtagNtaggctacgtcat
atcttccttcgtttcgagcgtaaaactcctactcttcgtaagagtaaggc
ctaaaagcctagatctgtctattgtgtagactaatttaaatttaatcaaC
TATTGGTTTGACTTATAATCCCGCTTCCCTTACTAACAATTTCATGTACC
AAACCTTTAAAATGAAGAGGAACAGATTTGAATTGAGTTAAATTGTAATG
CATTGTATTATATCTTTTTCATTGAACAGACCCACCGAGAAACAACAGGT
AACAAAACCAAAACCACTTCCAAGAACGGGAATTCAACTTTATGACAGTC
AAGAACAAGTCACACCAAAGCCTGCCCAACCAACAACGTGAGTAGTGATT
TTTATTAGAACCAACTTTACAAGAAAATTCAGAATGAAATTCATAAAACA
GTAGAGATATTCCTAGacctgaaataaaaaacaaatcacTTTGGTATGAC
TCGgccggggattgaacccacgactttgcgcaccgtagccgggtGCTCTT
CCACTGTCCTATTGTCGTTTTGTAAGAGCATCCAGGCTGAAATTCATaag
ataacaagtgatacttttatggacctacctaaagtctgtccagatataat
tggcccgtttttagtaattaagttggagatttgatatttcacagaaaagt
gctaccaaggggtattccgggtcccatatcttccgaaggacttttctgtt
tgccttgaaatttatcaaacttcttaacctaaggttgaactaccactggt
gtaaaaatgaacgttgtagcttaagtagaaaaaaagctcaatttttacaa
tcgcaaattaaaacgctaaaaatcgcgaatttttcaactcaaaatacatt
caaatatagcgcttttgattctctaaaacaagcaaaaaaaatttccataa
tcatatttgactatcaaaagttaccggcattcttgtttccactgccaatt
atatctggacagactttagttatgcatttaacacatatataattaatatc
tacgtgagcgtgaccattaaacaatcattcagaacacaaatagtgacgat
ctattaaaattagtcgtttgtttcttataaaaaaaaagtttaaaaaccaa
aagtttcatgctcttgaaatattcttcataTTCAAGGCtttatgagcaaa
aaaacatccatctcatcaaaaaattgagtaatttggctaagaacattgat
gtatgcttatcaatagtgattcttatagataaacatgcgttttttgagcc
aaaaaaatatttttgaaaaaatctgcttcagccatcttttacctatgatg
gtaacAAAGTTCaactcgaaaatcgggctccgtcacattcgagggtttat
agttacacatctttgtgcaaaatcagaaaaaactaatgagccaatcacga
ggaaagctaataacgaacgaacgaacggacaaaggttaatttataggacc
tccaccccaccggtgtaggtccaaaaattcagAACATCATAACATAAGCC
TAATCTTATAATCCTAAGCCTGGTCAGTATTTCCAAGACTGACACTATTT
TACGCCACCAGCTTAAAATCTTATAAAATAGGTTGTAAAGTATACGCTCT
TTATTATGAggttttttaccctttttcaggTTCAGCATTGCTCTTTTTTA
TNCCACCAGCTTAAAATCTTATAAAATAGGTTGTAAAGTATACGCTCTTT
ATTATGAggttttttaccctttttcaggTTCAGCATTgctctttcttttt
ttgcgattttgggtctccttgtttttataaaattgttctataaaAAAAGA
GTCCTAAAGGGTCGAtgatacttttttttcgaatcAATTCTCCTTTTGCA
TCCCGATTCTTTGAGGTTTGTATAATGTTCAAGAGAAATAAGTTGCCAAA
TTCAATGATGGGGGTATTCcccgggggtgggggggggtactaggtttgcg
aggtgacgggtatgtccgagccgaaaatcgaaaatcgaccctttgagaga
caaaattttggtgattttgggaccctttgagggattttttcctaaatttt
ggtccattttttccaaattttggtttgattttcaccaaattttggtcaaa
aTTTTTGAAATCGTGACCCTTTGAGAGAGAaatttttgattttcgtgatt
ttgggaccctttcagagactaacttttgaatttgtacccctttgagagac
ttttgaggaatgagaaaaggtacccttatggctcgcacatacccggcacc
cattttgcctaagtacccccccccggggggtaTTCTTAGCACAATGTATT
CTTAATTTTGCagtcaatttcatcatgaatgtTCAGATAgaatatattct
tataaaaaagcgtgtccGTCGTGAAAGAGCTTTTCGGCTATGGTATTCTA
CTTATCAAGCTGATTTTTTCTCCTAATGCGagcatagtccgtataaaaac
cccggtctggaagccttttgttttttcgcattgtttcttacttgaacttg
cgttgagtaattagtttgttttgctcactttttgatcgtGTGATTGAATA
TTacaaccaatcccaagaggagtaattggtaacgtgatcaaaaactgagc
tgacaaaaagctaaaacaataagTTTCCAGACCAAGGTCTGACGATGCGA
TATACTACTTGTTTTATCAAATTATTCCATGGTATTTTTAGAACCAAATG
GGACGGAAAGAAAATTCATGAGATAGTGTTCCAGGGTAAAAGGCTGTCGT
TTGATGGTAAGTTGaatttgtatatgtaatcacatgataacgagtacaat
tcgagaataattacacgagtgcaattttcgaattgtacgagttattatgt
gaatACGAGCTAATCGTACAATgggtttcactactttttccccgttagga
aagtaaattacactgaaagttttaaattttctcttctctctatgtttttc
ttttattgttattcatggattttctttctcacaaaataaatttcgagttc
aattaaaacgttcgatgaaaaaaaattgtaagagAAAACATTAAAATCGA
TTTAGTAAATATTGGCGCGGCATCGatgagtgtgattaacgattaattgc
tctctacagaatgcaattaacgattaattgctctctttgaaggggtgcca
aatgggaaaaaataactcatcgtgcgattatacTATTAATTTTTCACATC
TCTCAATAAAAAAAAAGGAGGTCTCAAAATCTTTTTGGTTGATTACGATT
CTATTCATTtaaaccttttttataagaacagaatattaagaacaaaagGA
TTCGATGGTCAAAATTGTTAAGAACAAAACAAGTAAAAGACTTTTAGGCT
TTGCGGGCTCTAAACATACCCGGCTTCTTTGAACATTGCAAAAtaacact
cacaaaatggtgaaattaagaaagTTTTGAGATCATATTTAGGCTTAAAA
AAGTTGAGAAcctccgaaggcttcaaaaacgtttgatgttcttataaaaa
acatgtatatacACAAGGGAGTCGTCAATTAACCAAATTCATTCATTATG
tcgatttcatttttaatttcgcatagcgaaagtattacgatagtcttttt
gtgtgtgtgtgtggcgagaaaaatttttgggcgcaaattatggcgtgggc
gtttggctgcgggcgtactacggccaatattttAAAgttggactcactca
caaagataaaaaacagcgcttttcttgANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAAAaattttggcgggtatttaatttggcggatttcgcctaaaaccgcca
aatccgccaaatttaatccccgccaaaattaatacacttaagGTATTGCG
TTGAGATTTTGGAAAATCTCAAAGAGTATTATNatattttgtgtaacgct
tcattcaaaatccataatgctgccggagtcacgtttcacgttttcgtcgt
tgatgttctaatattatgcgaaattttcgactttaagtcgtcttgttttt
cttcttctcgGCTCGtataaaagtagaaaattttagcGCTCAAAGAATGA
GTTAGTTTTTTATGAGGATGGAGGAGAGGGTTGTTTTATGGGTTTGGATG
ATTGATGTTTTTATATCGAGATCACACAGTTCAATTAGATGTTACgttaa
agggataaccagatggtttgagatatttagattaCAGAAACCTTCTGTGG
TATTTATTAAACCCCCgtaaaacctcaaagtatttttttgtaacaatttt
ccaaaatcgagatatcaaaatttgaaattttagaaaatgggttcttacac
gattcttacgttgaaattctattgttttcatcctaAAAGCCAAAACTTGT
ATCTTTaaaatatctcgactttggttttgctcaggacaatagaaggatcc
cacatgccaaatattacaaaccatctgattatccctttaataaTGGAAAA
AGCTCGTTGCAATAAAAGGTTTAAATCATGAAActtgtcattttatcatt
taCTCAGATTAAACTGAAATTTAAGAAAGAAACAATTGGTAAAATTATtg
caaataatgtttttaaatttgaagaGACAAAACGTGAAATTTCTAAAATC
ATTTGACAATCATTGACATTCTTTACTTTGATCCTTAAACAAACTTTGCC
CNGTGAAGAGACAAAACGTGAAATTTCTAAAATCATTTGACAATCATTGA
CATTCTTTACATTTATTTGCCTTTGTTGAATTCGTCAACTTCTCAATTTA
TGGAATTCCATTCTGACAAAAGACATTTTTTCTCGAATGATTAGCAGTTG
CTAATACAGAAATGGTTTTTTCAATTCAGTTTTcattcaaatcaaaagaa
aattcgcCATAATTTAAACATCtctttttcctttctttatgaaaaaaatt
attttcaaaatatttttagttcCCTGNTAATTTAAACATCtctttttcct
ttctttatgaaaatatttttagttcCCCAGATGTCGAGgttcgatttttt
aaagtagaaatttcGTATCTTTATGATTAAAAATGATTTCGCACTGAGAA
AAAAGTACtcatctaaaattcaaaatttttttgccatcaattcagaaata
tttttcttgttcagATTGGAAAATTTCAGCTCATAATTATTCTTAGTTTC
TGAGATCTCGAGGTTCGATTTTTTAAagtggaaaaattttcttctgtcac
ggataaaaatgatttcttgctgagcaaaaagttttcatctaaaattcaaa
attttttcgccATCAATTCGGAAAGGTTTTCCTCGTTCtgtttacaaaat
ttcagcttcaaagtatttttagttCCTGAGATATTGagattcgttttttt
tttgaaagttttttttaccgcgtgaaaagtttgaatttcttcactttctc
ttcagatgtttggaaaattttgagcgaaaagaatttcacgaaattcgaag
aaattttCCAACAAAATCCGAACATCGTCAACTCGTTGCGTGATAGTTTT
GATCAGACACTTCTCATGAAGGCTGTTTATGAAGATCGTTTCGACGTTTT
CGTTCACTTGATGGATTATCCTCATGATTTTTCACTCGTGGACAATGATG
GTGAGAACGTTCTTCATTTTGTTGGTTCGCATGGAACAGTTCGTTATTTG
GAAAAGTTTGATCAACAAACCATCAAAATGTTGATCAATGGAAGAGACAA
ATCGAACAACGACACACCATTGCATTATGCAGCAAGTTGGAACaaacatg
acgtcatcagatggtTGTTGGCCAAAGGAGCGAATCCAGAATTGAAAAAC
AATCGTGGTCAACGCCCTGATGAACGTGGATGTTGTGATGGTGTTACCAA
AGAAATCTTTCG Coding sequence (CDS) from alignment at scaffold_100:286693..296254+ >TCONS_00045668 ID=TCONS_00045668|Name=TCONS_00045668|organism=Clytia hemisphaerica|type=CDS|length=7275bp|location=Sequence derived from alignment at scaffold_100:286693..296254+ (Clytia hemisphaerica)
AAACACGAAGATGAAGAGTGCAAGGTGCCATGCGATTATTGGCAATATGG
TTGCCATGAAATGaTTCACAAACGGCACATGGAGCGTCACCTTGCCAATT
CAGCAAGACGACATATCGAACTTGTTAAAGCTTATTATGACAGAATTGTT
GCCGAAAAAGAAAAACGACTGGTCATGAAGAATAAGGCAATTGCCGAAAA
AGACAAATTACTCGGCGAAAAAAATAGCTCATTGGTCGAAAAAGACAAAT
CATTGGCCGAAAAAGATAAGTTATTGGTCGGAAAAGACGAATCTTTGACC
GAAAAAAATCGATTATTGGCGGAGAAGGACAAATCATTGGCCGAAAAAGA
TAAGTTATTGGTCGAAAAAGACGAATCTTTGACCGAAAAAAATAGATCAT
TGGCGGAGAAGGACAAATCATTGGCCGAAAAAAATAGATCATTGGCGGAG
AAGGAAAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGG
ACAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACAA
ATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACAAATCA
TTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACAAATCATTGG
CCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACAAATCATTGGCCGA
AAAAAATCGATCGATTATTGGCGGAGAAGGACAAAGAGATTGGATTGAAC
ACGACGATTGTTTTACAAAGCGAACGCATTACGGAGCTTGAAGGGAATAA
AATACCAATAGCCACAGGAGGATCTAAACCCACCGAGAAACAACAGGTAA
CAAAACCAAAACCACTTCCAAGAACGGGAATTCAACTTTATGACAGTCAA
GAACAAGTCACACCAAAGCCTGCCCAACCAACAACAACCAAATGGGACGG
AAAGAAAATTCATGAGATAGTGTTCCAGGGTAAAAGGCTGTCGTTTGATG
atgtttggaaaattttgagcgaaaagaatttcacgaaattcgaagaaatt
ttCCAACAAAATCCGAACATCGTCAACTCGTTGCGTGATAGTTTTGATCA
GACACTTCTCATGAAGGCTGTTTATGAAGATCGTTTCGACGTTTTCGTTC
ACTTGATGGATTATCCTCATGATTTTTCACTCGTGGACAATGATGGTGAG
AACGTTCTTCATTTTGTTGGTTCGCATGGAACAGTTCGTTATTTGGAAAA
GTTTGATCAACAAACCATCAAAATGTTGATCAATGGAAGAGACAAATCGA
ACAACGACACACCATTGCATTATGCAGCAAGTTGGAACaaacatgacgtc
atcagatggtTGTTGGCCAAAGGAGCGAATCCAGAATTGAAAAACAATCG
TGGTCAACGCCCTGATGAACGTGGATGTTGTGATGGTGTTACCAAAGAAA
TCTTTAAACACGAAGATGAAGAGTGCAAGGTGCCATGCGATTATTGGCAA
TATGGTTGCCATGAAATGaTTCACAAACGGCACATGGAGCGTCACCTTGC
CAATTCAGCAAGACGACATATCGAACTTGTTAAAGCTTATTATGACAGAA
TTGTTGCCGAAAAAGAAAAACGACTGGTCATGAAGAATAAGGCAATTGCC
GAAAAAGACAAATTACTCGGCGAAAAAAATAGCTCATTGGTCGAAAAAGA
CAAATCATTGGCCGAAAAAGATAAGTTATTGGTCGGAAAAGACGAATCTT
TGACCGAAAAAAATCGATTATTGGCGGAGAAGGACAAATCATTGGCCGAA
AAAGATAAGTTATTGGTCGAAAAAGACGAATCTTTGACCGAAAAAAATAG
ATCATTGGCGGAGAAGGACAAATCATTGGCCGAAAAAAATAGATCATTGG
CGGAGAAGGAAAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGA
GAAGGACAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAG
GACAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACA
AATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACAAATC
ATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACAAATCATTG
GCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACAAAGAGATTGGAT
TGAACACGACGATTGTTTTACAAAGCGAACGCATTACGGAGCTTGAAGGG
AATAAAATACCAATAGCCACAGGAGGATCTAAACCCACCGAGAAACAACA
GGTAACAAAACCAAAACCACTTCCAAGAACGGGAATTCAACTTTATGACA
GTCAAGAACAAGTCACACCAAAGCCTGCCCAACCAACAACAACCAAATGG
GACGGAAAGAAAATTCATGAGATAGTGTTCCAGGGTAAAAGGCTGTCGTT
TGATGatgtttggaaaattttgagcgaaaagaatttcacgaaattcgaag
aaattttCCAACAAAATCCGAACATCGTCAACTCGTTGCGTGATAGTTTT
GATCAGACACTTCTCATGAAGGCTGTTTATGAAGATCGTTTCGACGTTTT
CGTTCACTTGATGGATTATCCTCATGATTTTTCACTCGTGGACAATGATG
GTGAGAACGTTCTTCATTTTGTTGGTTCGCATGGAACAGTTCGTTATTTG
GAAAAGTTTGATCAACAAACCATCAAAATGTTGATCAATGGAAGAGACAA
ATCGAACAACGACACACCATTGCATTATGCAGCAAGTTGGAACaaacatg
acgtcatcagatggtTGTTGGCCAAAGGAGCGAATCCAGAATTGAAAAAC
AATCGTGGTCAACGCCCTGATGAACGTGGATGTTGTGATGGTGTTACCAA
AGAAATCTTTAAACACGAAGATGAAGAGTGCAAGGTGCCATGCGATTATT
GGCAATATGGTTGCCATGAAATGaTTCACAAACGGCACATGGAGCGTCAC
CTTGCCAATTCAGCAAGACGACATATCGAACTTGTTAAAGCTTATTATGA
CAGAATTGTTGCCGAAAAAGAAAAACGACTGGTCATGAAGAATAAGGCAA
TTGCCGAAAAAGACAAATTACTCGGCGAAAAAAATAGCTCATTGGTCGAA
AAAGACAAATCATTGGCCGAAAAAGATAAGTTATTGGTCGGAAAAGACGA
ATCTTTGACCGAAAAAAATCGATTATTGGCGGAGAAGGACAAATCATTGG
CCGAAAAAGATAAGTTATTGGTCGAAAAAGACGAATCTTTGACCGAAAAA
AATAGATCATTGGCGGAGAAGGACAAATCATTGGCCGAAAAAAATAGATC
ATTGGCGGAGAAGGAAAAATCATTGGCCGAAAAAAATCGATCGATTATTG
GCGGAGAAGGACAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGG
AGAAGGACAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAA
GGACAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGAC
AAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACAAAT
CATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACAAAGAGAT
TGGATTGAACACGACGATTGTTTTACAAAGCGAACGCATTACGGAGCTTG
AAGGGAATAAAATACCAATAGCCACAGGAGGATCTAAACCCACCGAGAAA
CAACAGGTAACAAAACCAAAACCACTTCCAAGAACGGGAATTCAACTTTA
TGACAGTCAAGAACAAGTCACACCAAAGCCTGCCCAACCAACAACAACCA
AATGGGACGGAAAGAAAATTCATGAGATAGTGTTCCAGGGTAAAAGGCTG
TCGTTTGATGatgtttggaaaattttgagcgaaaagaatttcacgaaatt
cgaagaaattttCCAACAAAATCCGAACATCGTCAACTCGTTGCGTGATA
GTTTTGATCAGACACTTCTCATGAAGGCTGTTTATGAAGATCGTTTCGAC
GTTTTCGTTCACTTGATGGATTATCCTCATGATTTTTCACTCGTGGACAA
TGATGGTGAGAACGTTCTTCATTTTGTTGGTTCGCATGGAACAGTTCGTT
ATTTGGAAAAGTTTGATCAACAAACCATCAAAATGTTGATCAATGGAAGA
GACAAATCGAACAACGACACACCATTGCATTATGCAGCAAGTTGGAACaa
acatgacgtcatcagatggtTGTTGGCCAAAGGAGCGAATCCAGAATTGA
AAAACAATCGTGGTCAACGCCCTGATGAACGTGGATGTTGTGATGGTGTT
ACCAAAGAAATCTTTAAACACGAAGATGAAGAGTGCAAGGTGCCATGCGA
TTATTGGCAATATGGTTGCCATGAAATGaTTCACAAACGGCACATGGAGC
GTCACCTTGCCAATTCAGCAAGACGACATATCGAACTTGTTAAAGCTTAT
TATGACAGAATTGTTGCCGAAAAAGAAAAACGACTGGTCATGAAGAATAA
GGCAATTGCCGAAAAAGACAAATTACTCGGCGAAAAAAATAGCTCATTGG
TCGAAAAAGACAAATCATTGGCCGAAAAAGATAAGTTATTGGTCGGAAAA
GACGAATCTTTGACCGAAAAAAATCGATTATTGGCGGAGAAGGACAAATC
ATTGGCCGAAAAAGATAAGTTATTGGTCGAAAAAGACGAATCTTTGACCG
AAAAAAATAGATCATTGGCGGAGAAGGACAAATCATTGGCCGAAAAAAAT
AGATCATTGGCGGAGAAGGAAAAATCATTGGCCGAAAAAAATCGATCGAT
TATTGGCGGAGAAGGACAAATCATTGGCCGAAAAAAATCGATCGATTATT
GGCGGAGAAGGACAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCG
GAGAAGGACAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGA
AGGACAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGA
CAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACAAA
GAGATTGGATTGAACACGACGATTGTTTTACAAAGCGAACGCATTACGGA
GCTTGAAGGGAATAAAATACCAATAGCCACAGGAGGATCTAAACCCACCG
AGAAACAACAGGTAACAAAACCAAAACCACTTCCAAGAACGGGAATTCAA
CTTTATGACAGTCAAGAACAAGTCACACCAAAGCCTGCCCAACCAACAAC
AACCAAATGGGACGGAAAGAAAATTCATGAGATAGTGTTCCAGGGTAAAA
GGCTGTCGTTTGATGatgtttggaaaattttgagcgaaaagaatttcacg
aaattcgaagaaattttCCAACAAAATCCGAACATCGTCAACTCGTTGCG
TGATAGTTTTGATCAGACACTTCTCATGAAGGCTGTTTATGAAGATCGTT
TCGACGTTTTCGTTCACTTGATGGATTATCCTCATGATTTTTCACTCGTG
GACAATGATGGTGAGAACGTTCTTCATTTTGTTGGTTCGCATGGAACAGT
TCGTTATTTGGAAAAGTTTGATCAACAAACCATCAAAATGTTGATCAATG
GAAGAGACAAATCGAACAACGACACACCATTGCATTATGCAGCAAGTTGG
AACaaacatgacgtcatcagatggtTGTTGGCCAAAGGAGCGAATCCAGA
ATTGAAAAACAATCGTGGTCAACGCCCTGATGAACGTGGATGTTGTGATG
GTGTTACCAAAGAAATCTTTAAACACGAAGATGAAGAGTGCAAGGTGCCA
TGCGATTATTGGCAATATGGTTGCCATGAAATGaTTCACAAACGGCACAT
GGAGCGTCACCTTGCCAATTCAGCAAGACGACATATCGAACTTGTTAAAG
CTTATTATGACAGAATTGTTGCCGAAAAAGAAAAACGACTGGTCATGAAG
AATAAGGCAATTGCCGAAAAAGACAAATTACTCGGCGAAAAAAATAGCTC
ATTGGTCGAAAAAGACAAATCATTGGCCGAAAAAGATAAGTTATTGGTCG
GAAAAGACGAATCTTTGACCGAAAAAAATCGATTATTGGCGGAGAAGGAC
AAATCATTGGCCGAAAAAGATAAGTTATTGGTCGAAAAAGACGAATCTTT
GACCGAAAAAAATAGATCATTGGCGGAGAAGGACAAATCATTGGCCGAAA
AAAATAGATCATTGGCGGAGAAGGAAAAATCATTGGCCGAAAAAAATCGA
TCGATTATTGGCGGAGAAGGACAAATCATTGGCCGAAAAAAATCGATCGA
TTATTGGCGGAGAAGGACAAATCATTGGCCGAAAAAAATCGATCGATTAT
TGGCGGAGAAGGACAAATCATTGGCCGAAAAAAATCGATCGATTATTGGC
GGAGAAGGACAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAG
AAGGACAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGG
ACAAAGAGATTGGATTGAACACGACGATTGTTTTACAAAGCGAACGCATT
ACGGAGCTTGAAGGGAATAAAATACCAATAGCCACAGGAGGATCTAAACC
CACCGAGAAACAACAGGTAACAAAACCAAAACCACTTCCAAGAACGGGAA
TTCAACTTTATGACAGTCAAGAACAAGTCACACCAAAGCCTGCCCAACCA
ACAACAACCAAATGGGACGGAAAGAAAATTCATGAGATAGTGTTCCAGGG
TAAAAGGCTGTCGTTTGATGatgtttggaaaattttgagcgaaaagaatt
tcacgaaattcgaagaaattttCCAACAAAATCCGAACATCGTCAACTCG
TTGCGTGATAGTTTTGATCAGACACTTCTCATGAAGGCTGTTTATGAAGA
TCGTTTCGACGTTTTCGTTCACTTGATGGATTATCCTCATGATTTTTCAC
TCGTGGACAATGATGGTGAGAACGTTCTTCATTTTGTTGGTTCGCATGGA
ACAGTTCGTTATTTGGAAAAGTTTGATCAACAAACCATCAAAATGTTGAT
CAATGGAAGAGACAAATCGAACAACGACACACCATTGCATTATGCAGCAA
GTTGGAACaaacatgacgtcatcagatggtTGTTGGCCAAAGGAGCGAAT
CCAGAATTGAAAAACAATCGTGGTCAACGCCCTGATGAACGTGGATGTTG
TGATGGTGTTACCAAAGAAATCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045668-exon-scaffold_100-1491911889:286693..286755 | TCONS_00045668-exon-scaffold_100-1491911889:286693..286755 | Clytia hemisphaerica | exon |
| TCONS_00045668-exon-scaffold_100-1510915933:286693..286755 | TCONS_00045668-exon-scaffold_100-1510915933:286693..286755 | Clytia hemisphaerica | exon |
| TCONS_00045668-exon-scaffold_100-1575043694:286693..286755 | TCONS_00045668-exon-scaffold_100-1575043694:286693..286755 | Clytia hemisphaerica | exon |
| TCONS_00045668-exon-scaffold_100-1491911889:286960..287723 | TCONS_00045668-exon-scaffold_100-1491911889:286960..287723 | Clytia hemisphaerica | exon |
| TCONS_00045668-exon-scaffold_100-1510915933:286960..287723 | TCONS_00045668-exon-scaffold_100-1510915933:286960..287723 | Clytia hemisphaerica | exon |
| TCONS_00045668-exon-scaffold_100-1575043694:286960..287723 | TCONS_00045668-exon-scaffold_100-1575043694:286960..287723 | Clytia hemisphaerica | exon |
| TCONS_00045668-exon-scaffold_100-1491911889:288422..288529 | TCONS_00045668-exon-scaffold_100-1491911889:288422..288529 | Clytia hemisphaerica | exon |
| TCONS_00045668-exon-scaffold_100-1510915933:288422..288529 | TCONS_00045668-exon-scaffold_100-1510915933:288422..288529 | Clytia hemisphaerica | exon |
| TCONS_00045668-exon-scaffold_100-1575043694:288422..288529 | TCONS_00045668-exon-scaffold_100-1575043694:288422..288529 | Clytia hemisphaerica | exon |
| TCONS_00045668-exon-scaffold_100-1491911889:290884..290948 | TCONS_00045668-exon-scaffold_100-1491911889:290884..290948 | Clytia hemisphaerica | exon |
| TCONS_00045668-exon-scaffold_100-1510915933:290884..290948 | TCONS_00045668-exon-scaffold_100-1510915933:290884..290948 | Clytia hemisphaerica | exon |
| TCONS_00045668-exon-scaffold_100-1575043694:290884..290948 | TCONS_00045668-exon-scaffold_100-1575043694:290884..290948 | Clytia hemisphaerica | exon |
| TCONS_00045668-exon-scaffold_100-1491911889:295798..296254 | TCONS_00045668-exon-scaffold_100-1491911889:295798..296254 | Clytia hemisphaerica | exon |
| TCONS_00045668-exon-scaffold_100-1510915933:295798..296254 | TCONS_00045668-exon-scaffold_100-1510915933:295798..296254 | Clytia hemisphaerica | exon |
| TCONS_00045668-exon-scaffold_100-1575043694:295798..296254 | TCONS_00045668-exon-scaffold_100-1575043694:295798..296254 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_100 | supercontig | scaffold_100:286693..296254 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00045668 vs. Swiss-Prot (Human)
Match: MAP1A (Microtubule-associated protein 1A OS=Homo sapiens GN=MAP1A PE=1 SV=6) HSP 1 Score: 82.0333 bits (201), Expect = 3.051e-16 Identity = 52/125 (41.60%), Postives = 84/125 (67.20%), Query Frame = 1
Query: 112 HIELVKAYYDRIVAEKEKRLVMKNKAIAEKDKLLGEKNSSLVEKDKSLAEKDKLLVGKDESLTEKNRLLAEKDKSLAEKDKLLVEKDESLTEKNRSLAEKDKSLAEKNRSLAEKEKSLAEKNRSI 486
H E+V+ D + +K++ L +KN+A+ ++DK L +K L +KD +L +KDK L KD+ L EK++ L +KDK EKDK L +KD +L +K+++L KDK L +K+R L +KEK EK++++
Sbjct: 1376 HKEVVEPK-DTAIYQKDEALHVKNEAVKQQDKALEQKGRDLEQKDTALEQKDKALEPKDKDLEEKDKALEQKDKIPEEKDKALEQKDTALEQKDKALEPKDKDLEQKDRVLEQKEKIPEEKDKAL 1499
The following BLAST results are available for this feature:
|
