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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045900 ID=TCONS_00045900|Name=TCONS_00045900|organism=Clytia hemisphaerica|type=transcript|length=799bp
AAtcggtaaaaaaatttttggtgaATAAGATTAAGTTTTCTTCTCATATT
ACATTTATGAACTTGAGAGATGATAAGAGAAAATCAATGATGATGGCCCA
GATTTAGTGGTATATATTTCTTTTCTccgctacgtcatatcttccttcgt
ttaaAGCGTAAAAATTCGTACTCTTTGTAAGGTACACCCTTTTTGCGGGT
GTAACAAAGAGCACCTAataaaaatcaatataaaaaaaaaatacaaaaaa
tgcaTGCACTATAATCTTGGAGAAAAGCGTAgacaaaaaaacatgaaaag
atccttataaaaaaacgctcCATTTCTGAAAGCAAAGTTTTTTAATCAGG
AAGATTTAATTGTTTGTCTTTTTCGTTTTCATCTTCAGTGCTGCCTTGGT
TTGACTTACCATCTTGAGGTGGTTCTGGCTTCTTAATATCAATTCCACCA
AGTAGCATTGAAGCCATCCCGTTGATCATTTGCTGCTTTTTGGCGTCTGA
TGCACGTTTCATTTCCGCCGTGGTTGGATAAACGCCATCACGTACAACGC
CCTCCGCCACGAACGAGGCGTCAGCGCTGGTAGCACTCCAATGAGCAATC
TGTTGTAAATTAGCACGTGCCTCTTCCGTAGGTATTTCATATTGGAAAGA
TGAATCATCACTTAATTCTGCATCGTTGAGAATAAGTTTTAAACCCTGGC
ATCGGATATAATAGAGACATTCGATTTGTGATCGTGTACAGATTTCGATT
GTGACATTTGAGCTGTCATCTACTTGGAAAGTTGGCACCTGAATaagat Run BLAST on NCBI transcript from alignment at scaffold_102:461213..462083- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045900 ID=TCONS_00045900|Name=TCONS_00045900|organism=Clytia hemisphaerica|type=transcript|length=871bp|location=Sequence derived from alignment at scaffold_102:461213..462083- (Clytia hemisphaerica)
AATCGGTAAAAAAATTTTTGGTGAATAAGATTAAGTTTTCTTCTCATATT
ACATTTATGAACTTGAGAGATGATAAGAGAAAATCAATGATGATGGCCCA
GATTTAGTGGTATATATTTCTTTTCTCCGCTACGTCATATCTTCCTTCGT
TTAAAGCGTAAAAATTCGTACTCTTTGTAAGGTACACCCTTTTTGCGGGT
GTAACAAAGAGCACCTAATAAAAATCAATATAAAAAAAAAATACAAAAAA
TGCATGCACTATAATCTTGGAGAAAAGCGTAGACAAAAAAACATGAAAAG
ATCCTTATAAAAAAACGCTCCATTTCTGAAAGCAAAGTTTTTTAATCAGG
AAGATTTAATTGTTTGTCTTTTTCGTTTTCATCTTCAGTGCTGCCTTGGT
TTGACTTACCATCTTGAGGTGGTTCTGGCTTCTTAATATCAATTCCACCA
AGTAGCATTGAAGCCATCCCGTTGATCATTTGCTGCTTTTTGGCGTCTGA
TGCACGTTTCATTTCCGCCGTGGTTGGATAAACGCCATCACGTACAACGC
CCTCCGCCACGAACGAGGCGTCAGCGCTGGTAGCACTCCAATGAGCAATC
TGTTGTAAATTAGCACGTGCCTCTTCCGTAGGTATTTCATATTGGAAAGA
TNTAGCACTCTAATGAGCAATCTGTTGTAAATTAGCACGTGCCTCTTCCG
TAGGTATTTCATATTGGAAAGATGAATCATCACTTAATTCTGCATCGTTG
AGAATAAGTTTTAAACCCTGGCATCGGATATAATAGAGACATTCGATTTG
TGATCGTGTACAGATTTCGATTGTGACATTTGAGCTGTCATCTACTTGGA
AAGTTGGCACCTGAATAAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045900-exon-scaffold_102-1575043694:461453..462083 | TCONS_00045900-exon-scaffold_102-1575043694:461453..462083 | Clytia hemisphaerica | exon |
| TCONS_00045900-exon-scaffold_102-1575043694:461213..461380 | TCONS_00045900-exon-scaffold_102-1575043694:461213..461380 | Clytia hemisphaerica | exon |
| TCONS_00045900-exon-scaffold_102-1510915933:461453..462083 | TCONS_00045900-exon-scaffold_102-1510915933:461453..462083 | Clytia hemisphaerica | exon |
| TCONS_00045900-exon-scaffold_102-1510915933:461213..461380 | TCONS_00045900-exon-scaffold_102-1510915933:461213..461380 | Clytia hemisphaerica | exon |
| TCONS_00045900-exon-scaffold_102-1491911889:461453..462083 | TCONS_00045900-exon-scaffold_102-1491911889:461453..462083 | Clytia hemisphaerica | exon |
| TCONS_00045900-exon-scaffold_102-1491911889:461213..461380 | TCONS_00045900-exon-scaffold_102-1491911889:461213..461380 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_102 | supercontig | scaffold_102:461213..462083 - |
Blast
The following BLAST results are available for this feature:
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