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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046308 ID=TCONS_00046308|Name=TCONS_00046308|organism=Clytia hemisphaerica|type=transcript|length=3805bp
TGCAAAAATATATCCGTTGATGTACGCCGTCATCGACGCCCTTCACCGAC
TTTAACCAATtttatctgtcaatcaaaacttGTCAATCAAAACTTGTCAA
TCAAAGTTCGAAAGACTGACTTGAGGAAGAGCGCAGCGTTCACAATCCTC
TCAAAATCGCCAAAGACAAAGTCGGTCATACAGAAGTACCAGCTGATGTG
CCTGTCATTCAAACATTCCCATAATGAAAGATAGACTCAAAGTTGGTAGT
AGAGTCAGCTGTGTTATAGAAGGCATATTCCCAAACTTTATACACCTATC
TTTTCGGTCAGCAGGTGTCGTCTATCGAGGTGTCCTGTTAAATGAAACTT
GCTCAACTGTGAAAAGggTCATCCCAAACAACTATTACAAGGAGAAGAAA
GTGTTGGAACCGGAAGTCACGCAATCACTATACGATGCTGTCAACACGCG
TGATCTAGATACCAAATCCAAAGGTTTACGTAGCAAGAAACTCAAACCAA
CTTATATCGTGCTCGACGATTATATATACAAGTCCGATAATGATCCACCT
CCCATTGAACataaaccaaagaaaaatgaCGGATCTGAATCATTATCGCC
AAAAGATTCGAAAGATTCTGTTGGTAAATCACCTATTGATTCTCTATTTG
GTTTAGTGGAGAGTCTGGATTCTAGTATTGGACGACCAGTTATTGAAAGA
CAAGACGAATCAATAGACGATCCTACCACAAAGCAAGATGAAAGGAAACG
CACCAAATTGACTGCTGAAGATGAGACAGcaaataaaaatgagaaatcTT
CTTCTAAAACTATTGAGAAACAACCGTCTAAAAGCGCTGTAAAATCGTCT
AATAAGGCTCCATCAGAAAAGCAAGCAACACCGTCAAGTAAACAGTCAAC
GTCATCAAAATCGCTGAAACCTCCACTCGTTAAAGAAACTTCACCGCAAG
ATAGTGACAGCAGTGATTCGATTATCAAGATTCCCTTAGCTGGTCATAAA
ATTCAAGACATTGATCTCAAAAATTCCGTAGAAACTCTTGGTTTATCTTC
ACCGAGATCGCCAGTTAAATCACCGGACCTGAATACAACCACGGATGGTT
TAAAGGATATATCCACACCTTCGCCAGCTAAGAAACTGAAGAAAGATAGT
CTATCCTCTTCGACAGACGCCAAAGTAACGCCGGATGAGAAGAGACGACG
TAAAGGCAAGAAACTAGTCTATAAcccaaaacaaaggaatcgtaaattga
aattgagtaaAGAGACCAATAAGATTCAGTTAACTCCTGAGGAGATTATA
AAAGAAGGCGCGTTACCtattgttaaaattgaaaagaaaaaagttcaacG
GAAACCTGCCGGTCAGAAACGTATCGATCCCATTGCGCTTGCTttgaaga
acatcaaaaatcgCGAAAAGACGCGACGTCGGCAACGAATGGGAATTGCG
ACACGGCGTGCATTGTCAACGTCACCGAACGATCTATTACGGAAAGCTGA
ACGTAAGGGcttaaagaagaagaaaaagagagTGAAAACAACGGAAGAAA
AACGAGAAGAAGAACGTCTGAGACGCGAAGAAGAAGCCAAAGAAGAAGCA
ATGAAACtcgaaaaagcaaaacaaaaggaATTGAAACAACAGAAACGTCT
TAGCGAACGTTCCGTCACAAGAAGCGTAGCGGCCTCCCAAGAAGACGGCG
TTTCAACGCGAAACCGCAAATACACACTTGGTGAGAAAACAGCAGCAAAG
ATTGTCAAAAAGTCAAGGAATATTCAATCACAACGCATTTCAGCTGAGAG
TAGAAAGAAAATGACACTACCCTTAACAGTAACTAGTAGCATGAATTTAT
CACCGATCGTCAAAATTGTAGATCATGGGTCGCCTCCAAGGAATCAAACA
ATTGCCGTTTCTACAACGAATACAAAATCATCTTCAACAATAACAAAACC
GCCTTCGAAAAACTCGAGTAATACTAACGAGATTGATTTGACGTGTCACG
AACAGATCGTATCTCCGGAGACTTTTAATTCGTTCCCCGTACAACCTAAA
AAGAACCGTCGTAAGCCATTACACGTTTTCAAATCGTTACCGAATCCGGC
GACGACAGATCCAGCTACGGACGGTATATACACGGAATATAAAGACATTA
ATCAAATTGAAAAGACCGTTTCTACTCAAGAAACTCCCGTTACTACGAAT
ACAACGACGTCTCTGTCTACCGCTACGACCACAATTTCAACAACTTCAAC
TTCGACAATAGCCACATCCACGTCTGAATCAGAATTATTTGGAAAACCCT
ATAAAATCACGATATCACGAATGAACAGACCCACATTGATTCCTAGACGT
TACCTACATTCAGACAGCTTAGCACCAGCTTATCAAACACTTGTCCAGCA
ACCCATCGTCAATAAACCGTCCCCATTCAAACAACTCCGAAAATCAACAG
TCAATATTGTCGCTCGTCGGCAAAACACAGAAAGCGACAATGCGTCAACG
TCATCGACGGTGACGTCACCAACGATTGATGACGTCCCGTCAAACGGCAA
AGATAACGAGAACGAAGAAAACAATAAAGACTTAGAAAATGAAGACGGCG
AAAAACGTGACCATGTTAATAAAAAAAGTGGGAAACCGAAAAAGCGTAAA
AAGCAAGCTATGTTCGATTTTCACGATACATTAAAACCTATATCACGCTC
TAATGAGGATATAAGAATCGGTGATATTATTTGGGGTAAAGTCATGGGAT
ACGGCTGGTGGCCTGGGAAAGTCGTGTCTAAGTTCTATGATGGATCAGAG
TCTACTATTCGACGTGTTTTCTGTACATGGTTGGGCTCTAATACAAATTC
CACAATGAATATTCGTGATTTGGAATTGTTTTTaccgaattttgaaaaac
gtttcGATGTGAAGAAAAATTCTAATTCGTACACCAAAGCGGTTGTGGAA
GCGCAACATTGTTGCCGTACGAAATATGGCTTGAAATAAGAAATTACTCT
GTATTACTTTGTTGTTCAATtgttaaataatatttttagttcGGGCTTTC
TTTTTTCTAATTTGAGCTCTTGATCTTAAAACGAAAATCTAGTGTATATA
ATATTAAGGATTAtaaatttggaatatttttttctactATGGTATGTTAG
AGACTTAGTTTGGCTTCTTAGGGTGTTTTTGGCTAATGTTTTCTTTTAAG
GTAGTATACATAAAGGAGTAAATGTTTGTCAACTTAAATTTTAAGGCTTG
CTTAGACAACTTTGTCGAGGAAGGCTCTCGATTGAAATCCAGTTCCTTTT
ATTCACGTTCATGTATGTTTTTGGACTATCAATCTCTTATGTGTGTAGGT
CTCGATGTGTCACTTACTAGTTGTAACCTATTCATTTCCAAACTTGAAAA
AAGTTCATTGAATCCGATTTTGTAGATCCCAGTTCCAATTATCCTTTTCC
TCGAttaggttttttttatttcaaaaccattgttttttgtatataattta
ttttattttcgcgaaatcTTATAACAGAGTGTACAATTTTatacattttg
taattttattcTAGTTTTCCGTCCCATTTTTgttactaccttatcgggga
aaacttcgtcggggaaaattttcgtcggggaaacttttcgtcggggaaaa
atattcgtcacttgctggtagttggtaaacgcattaaggctggggaaaat
tttcgtcggggaaaaatattggtcacttggccaaaatttcgtcacttttc
cccgacgaagttttccccgataaggtattcaatTTCTGTTTCTTTTAAAA
GGTTA Run BLAST on NCBI protein sequence of TCONS_00046308-protein >TCONS_00046308-protein ID=TCONS_00046308-protein|Name=TCONS_00046308-protein|organism=Clytia hemisphaerica|type=polypeptide|length=921bp
MKDRLKVGSRVSCVIEGIFPNFIHLSFRSAGVVYRGVLLNETCSTVKRVI
PNNYYKEKKVLEPEVTQSLYDAVNTRDLDTKSKGLRSKKLKPTYIVLDDY
IYKSDNDPPPIEHKPKKNDGSESLSPKDSKDSVGKSPIDSLFGLVESLDS
SIGRPVIERQDESIDDPTTKQDERKRTKLTAEDETANKNEKSSSKTIEKQ
PSKSAVKSSNKAPSEKQATPSSKQSTSSKSLKPPLVKETSPQDSDSSDSI
IKIPLAGHKIQDIDLKNSVETLGLSSPRSPVKSPDLNTTTDGLKDISTPS
PAKKLKKDSLSSSTDAKVTPDEKRRRKGKKLVYNPKQRNRKLKLSKETNK
IQLTPEEIIKEGALPIVKIEKKKVQRKPAGQKRIDPIALALKNIKNREKT
RRRQRMGIATRRALSTSPNDLLRKAERKGLKKKKKRVKTTEEKREEERLR
REEEAKEEAMKLEKAKQKELKQQKRLSERSVTRSVAASQEDGVSTRNRKY
TLGEKTAAKIVKKSRNIQSQRISAESRKKMTLPLTVTSSMNLSPIVKIVD
HGSPPRNQTIAVSTTNTKSSSTITKPPSKNSSNTNEIDLTCHEQIVSPET
FNSFPVQPKKNRRKPLHVFKSLPNPATTDPATDGIYTEYKDINQIEKTVS
TQETPVTTNTTTSLSTATTTISTTSTSTIATSTSESELFGKPYKITISRM
NRPTLIPRRYLHSDSLAPAYQTLVQQPIVNKPSPFKQLRKSTVNIVARRQ
NTESDNASTSSTVTSPTIDDVPSNGKDNENEENNKDLENEDGEKRDHVNK
KSGKPKKRKKQAMFDFHDTLKPISRSNEDIRIGDIIWGKVMGYGWWPGKV
VSKFYDGSESTIRRVFCTWLGSNTNSTMNIRDLELFLPNFEKRFDVKKNS
NSYTKAVVEAQHCCRTKYGLK Run BLAST on NCBI transcript from alignment at scaffold_108:449376..460698- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046308 ID=TCONS_00046308|Name=TCONS_00046308|organism=Clytia hemisphaerica|type=transcript|length=11323bp|location=Sequence derived from alignment at scaffold_108:449376..460698- (Clytia hemisphaerica)
TGCAAAAATATATCCGTTGATGTACGCCGTCATCGACGCCCTTCACCGAC
TTTAACCAATTTTATCTGTCAATCAAAACTTGTCAATCAAAACTTGTCAA
TCAAAGTTCGAAAGACTGACTTGAGGAAGAGCGCAGCGTTCACAATCCTC
TCAAAATCGCCAAAGACAAAGTCGGTCATACAGAAGTACCAGCTGATGTG
CCTGTCATTCAAACATTCCCATAATGAAAGATAGACTCAAAGTTGGTAGT
AGAGTCAGCTGTGTTATAGAAGGCATATTCCCAAACTTTATACACCTATC
TTTTCGGTCAGCAGGTGTCGTCTATCGAGGTGTCCTGTTAAATGAAACTT
GCTCAACTGTGAAAAGGTGAGAGCAACGTTTGACAATTCTTGATAAATCA
GGACAAAATCATCACCCATTTTATTGGCTAAGAAAGGTTTCATCTCACTT
GGGAATAAATTCAAGTCATATTAGTCTTTTAAAGTAAGTTTTTCGGATAC
AAAAAAATTCACCATCAGATTTCTCCCAAATTGATTTTGGTGAGAACTAA
TTTTTGTTAAAATTTGAAAAAATTCTCAACAAAATGTGTATGTTTGCTGC
GGCAGTCTGCCTATAATTTTCAAGAAAAAATGAGCCAATTTACACTACTT
GCCATTTTCTAAAATTGGTTCTTTCCAAAAATAAAAGACATTGCTGCATG
TCAAAATACCTCCAAGTGGATCAATTTTTGTGAGGATTATATTTCCCAAG
TTTTGCAAGTAATTTTTCCAAAAATTTATGAAATTTAATGCTCTCAAAAA
TTTTAAGAACCAGTATTTTTGCCAAAACCCTTAGGAAAATTAGTTGAAAA
GAGGGCGATTTGCAAAAATGAGTCCTGTAAAAATTTAATTATTTTTGAAT
AAAATGGTCTTGCGAAAATACCTGCGTGCAAAAATTTATCCACTTAAGGT
ACCTAAGGGAAGAAATTATTGCAAAATTTAATTTTGCGGTTGAGAGGATT
CTTTATGGTAAAAAGACCAATTTTATAGGTTATTTTTTAATCTTGAGAAT
ATTTGTTCTTCGCAGAATTTAATTTATTTGATTTCAAGAATTTGTCAAAA
AGCCAGGAAATTAAATTTGGTGAAAATTTGTTCTGAAGAAATTTCTTCCC
TTTTGGTAAGTTCTCACTAAATTTAGAATTTTAATGGTTTAGTACTCTTC
ACCAGAAAGTACCTGGTTACAGTATAGTTAAGTAATTAATTGTATATACA
GTAATTATGATTTTAATAAATTGTTAAATTGTTAATAAAATTGTTAATCA
TTTTTATCCAATTTTTTTATTTTGATGAAAATGATTAAATCTTTATTTTT
ATATGTATAGAACTACTCAAGTCATTTTCAGTTATGTGATTGAGGTCCAC
AACGGCACCTCTTGTAACACTGTTACAACACAATATTGTTCTCATGAAGA
GCACTAAAACGCACAAAAATAGCCCTAAAACTATTGCATCAAGCCTCATA
TTTTCATAGACCAAAAGTCTTTACACCAAACCCCAAAATGGAAAAAATGA
AAGGAAAAAAGTCCCATATCATAAAATATGTTAACTGCTGGGGCCTTGTA
ATTGACACAACAGAAATAAACACAAATTGTTTTGCTGTTTTCATCCATAC
ATCCATATGTAATTAATCGAACAGTTTGATTACCGAACTAATCGCACTTT
GTCAAACTTAATCGACTGACAAAAGTTCAATTACTGTAGATTATTTAATT
GAACTATTCAACACTTGCACAAATTGTGAGTATTTGATCAAGTTCGACAA
AACGTATTAAGTTTGAAAATGTTTGACAACAAGAAATGTTTGACAAATTT
GACAAAAGACTCCGTTAAACAAAGTTTGACGACAAAAAAAGTTTGACAAT
GTTCGTTAGTACAACAAATTTGTCGAAAGTTCCGTTCCACAAAGTTCGAC
CACAAGAAATAATATGTTCAATAGCTTTGACAGAAGTTCCACTAAAGTTC
GAAATCAAGAAATGGCAAATTGGAAGGAAATCCGTGCTTTGTTTTTTTAT
TCTCCAAAGCATTTTCGTTGAGTTCTATAAATATAAATGTACAATTAATG
TTTCTATGATGTGATATAAGTAAAAATAACTAGAATCATTAAGTAACAAA
CAAATTTTGAAAAATACGTAATATTATTTGAAAGATCAATCAAAACTCCC
ATCGTCTATCTTTGTGCCCGCTCACAGAGGCCTGGAAGGGTTTCTAAAAT
TATTGTTTGATTATAAACTTGACAAATTTTGATTAAGTATGATTAATGTA
ATCAAACAACTCGAACTATTAAAGTCTTTTTTTATAAGAAAGTTTGATAA
GTTTGATTTTTTTAATCAAACTCATCTTTTGAATAATTTGTGAGTATTTG
ATTAAAGTTTGACACCGAATTTAGTCGAACATTAATCGGACAATAAAGTT
CGATTGAGTTTGACAAAGTTCGATTAAAAATACAGTTCGATTGGTTCAAT
TAATTTTGTCTGCACTGGATACATAAATGGATTTATAAAAGAAGTTTCAA
TAAGAAGTTTTTGTCATAGTAAATGCTGGTAAATGTATAGATTTTTTATA
ATACTCAAGGCCTACAAACTTTTGTGAGCAGAAACTTTTACAAAGTAGAA
AATTGTAAACTTTACAGCATTAATTATCTAGCAGATTTAAAAGGGAAAAT
ATATTTTTGGTTTGGATGGATCTTAGGGATGGAAATATTAAAATTTTCAA
ATAAAAATGGTTAAAAGTCACCCTAGCTTTTTAGATTCTATCAAGAAGGT
GTAAAATGCTACAGACACTTCTTTGTAATTTGCTTTTCAGCTTTAGAGTT
TTTTATGATCTGAAATAATTATCTAACTAGGAGCATAAACCTTTATGAAT
CAGACTGAGATTTTCAATATACAGTATTTCAATTTATTGAAAGTAAAAAA
AAAATACTTTTAACGTTGTCGTCTAAAAAAACAGCCACGCTTTCCCCAGC
CACAGGTTACCTGATGGGTAACCAATTTTTCAATTCTTCAATTTTCTTTC
TTTTATAATGAAGGTCAATCAAACAAGTAACTAGCATATATTACCTCCGC
TCTCTGTCTAAGGTTTAGATAAGCTATGATAGCATCTGCATAGGGTTCGA
ATTATAAATTTAAGGAGCTTCACTATTTTTTTAGCAAAGCGAGGTAAAAA
AAGGAGTGTCACAGGCGAAATCTTTTCACTTTTAGCGAAGCATTTTTTGT
ATTCTGCGATGTTTGGAAGAAAATGCGAAAGTATCTTCAATTCATTTCTC
GAGAAAAGCGAAGTAAGACTTGAAATGAGTGGTAGACAAAGCAAAGTATT
CTGAAGTTTGGAAGTAGCAAGTAGATAAAGCAATAGATAAACGAGTGAAT
AAAGTAGCGAAGTAGCAAGTAGATAAAGCAATAGATAAACGAATGAAGAA
AAATGTGAGGTAGCGAGTAGAAAAAGGGGTGCATGTCACTAGTCCGACAC
TTTCTAGTCCGATAGTAAAATAGTCTGAATCTATGAAATAAATTTACAAT
TTAGAAGTCTTTTTTTCCGACGTCACTTTTGTCCAAAAACGAAAGATTTT
AAGAGTGTCGAATGTTGAATAAGGGTTTTTTCACTGAGATAATATTAATA
AAAGTTCATTTTGGCGGCATTTTGACATAATTAGAAATAAAGGACCAATC
AAATTTGCGTAAAGATAATTTATAGCAAAAAGAATGGGTTTTATAAGGGT
TGTAATGTAAATCACAAACTTATTTAATTCCAGCCCCCCCCCCTCCCAAA
GAAGGGTCGTAAAAACAGCTAAATCCAATTTCTTGACTCTTGAAAGCCTA
ATCCTAATAAAGCTTCCCAAAATTTAAGAAAAGTTGGGTTTAGGGGTCGA
ACCTCAAAGTCGGAACTTTGGATTTTTATATATAAGCACGTGGTTGCTTA
TATGTTATAAAAGATGTGCCTCCTTTTCGGCGATTCATATTTCGTTTTAT
ATGTTTTTTTTTTACTTGTTGTCGAACAAAATTGTTGTCGGAATACTGAC
GCATTCGTCAAATCCAATGTCGGGCATTTTTACTGTCGGACTAGAAAGTG
TCGGACTACTGACGACCTCCCTTCCCAGAAAAAGCAAGATATAGACAAAT
GAAGAAAGTCGCAAAGTAAAGAGTAGATAAAGCAATAGATAAACAAATGA
AGAAAGTTGTGAGGTAGCGACTTGATAAAGCAATAGATAAATGAATGAAG
AAAATTGCGAAGTAACTAGTAGATAAAGCAATAGATAAACGAATGAAGAA
AGTTATGAGGCAGCAATTTTGATAAAGTAATAGATAAACAAATGTGTTGG
TTAACAAAATAGGTGTTGTCTTATAATTTTTTTACTTCGCATTTTTGAGT
TAGGAAATCTTTTTTGGTTGCTAAATCTAAAATTCACTTCACATTTTGCA
AAGTGCAAAGCTATAATTCGAACCCTGAGTTGTTTACGTCTGGGCTTTTA
CTTCTGTATCAAATATATAAAATTTCAGGTCTTTTTTACAAAAAACATAG
TCGTCTAAGATATACAATAATTGGCATTGTGAGCACAATTGTATCAATTA
GTTATCAGTTATCAATTATATTGATTAAATTCTTTCATCGATATTATGAA
TTAGAAATTGATAGGGTCAAGGTATCGATTAGATCAATATTAAAAGCAAT
TGATCAATTAATCGATTTTATCAGGTTACATCTGGAAAAACATTTCAAAA
AAATTTTTGTTTCCAGCAAAAGTTTTATCGTTCTATTCAAAACATCACAG
ACATCATGTGCTATGATAAAAGTAAAATCAGTTTAAAGAAATTATTGATC
AAATTTACCTTAAAGGGATAATCAGATGGTTTGTAATATTTGGCATGTGG
GATCTTTCTATTGTCCTGAGCAAAATCTCAAAATATTCAAAATCTCAAAA
TATTTTTGCTTACCTTAAGGGAAGAAATTTTTGCGAGAAGAAATTTTTGC
GGGATTTAATTTAGCGAATCAGAGTTTCAAAATGGCAAATTTCGCGGAAT
TTAATTTCGCAAATGAGCTGATTTCAAAAGTTTCACAGAGTTTATTTTGG
CGATTGAGAAATTTCAAAAGAATTTTTTTTACAGAGAAAATGTTTGTCAT
ATTTTTCATCGATTTCATAACATATTTCAGTCACATTAACAAACTTTAAC
AACAAAATAATAACATCAAATATGAATGTTTTCATGATAAGTCACGATTA
AACTTCATCGCCTTCTTCTTTCTCCAAAAAATCAAATTTTGCGAAATTTA
ATTTGCGATTTAAATTTCGCGATTTTGCCATTTTGGTGTGTTTTGTGGAC
TTTAATTTCGCAAATTACGCCCAAATTCGCGAAATTAAATTGCGCAAAAA
TTTCTTCCGCGAAGATTTCTTCTCGCGAAAATTTCTTCCCTTAAGGTAGT
AACTATTTTCCAAAGTCAAGATATTTAAGTTACAACTTTTTGGTTTTTAG
AATGAAAACAATAGAATTTCAATGTAAGAACCGTGTAAGAACCCATTTGC
AAAAATTTCAAATTTTGATATCTCGATTTTGGAAAATTGTTACACAAAAG
TACTTGGAGGTTTTACAAAGGACCACAGAAGGTTTCTGGGGGGTTTCTGT
AATTTAAATATCTCAAACCATCTGATTATCCCTTTAAGATTATCCCCTGA
TTAAGGGGATTAATTTTCAGGTGGACTTTTTTTATCAAAATCAATATTTT
AAATTTTTTGTGTGGACTTATTTTTTGAATTGACTTATACTGAAGATTTT
GCATGGATTTATTTTTGCCAAATGGGGCTTCCATATGAAATTTAGAGATT
TTGAAATCAGAAATATTGGTAGCATGTTGGTTACCTATCTGCTATTTACA
TTTTTAGAAATTAAAGTTTGTCAAAAGATTTAGGCTACATAATATCTTCC
TTTTTTTCTAGCTCAAGATTCAAGTATTCACACAAAAAATAGTGCAGATA
TTCACACATTCATGCATTCAAAAAATATATTTTTATGTTCATCGTGCATT
CTTTTTCATTTTACAATTTCATCCTTGCTATAGGCAATTCATTGTCATGT
ACAACTACTGTAAACGGTGTGATTCTTGGGTAATTGTCAACTATGATTAG
AACAAGTTAGCTGAAGGTAGCCTGAGATCAGATTGTGATTGTTTTCGGTC
CACCAGGCTAGAGATCTTAAGAGATGGTTAAAAAAACAATCTGATGTATA
TGCAATGTCATTTTCTTGAGGTCCATGCATCGCCTATAGTGGACATAGGA
ACGACAACAAATTTTGGCGGGGATTAAATTTGGCGAATTTGGCAAATTTT
GACAAAAATTGGAAATATCTTGAAAATATGATGTTTCAATGAATTTCAGA
AATGGAAATATCATGAAATATGATATTTCCACAACTTTGGAAATATAGAA
AAGTCATATTTCCATATCTACCAAAGTATATGGAATTATCATATTTTCAA
GATATTTCCATGATTGGAAATCTCTTATTTCGCCCTGTGTTATGAACAGT
AAACTTAGAATTTGTGTCTATTGTCATGCTTTGCATAATCGTGTAATAAA
AGGTCTTTGATGTTTCTAATTTTGCATTTTTTAACACATTTTTCTGTATC
GATTTCTTCTTGAAAAAATGCAATAAGCCTAAAGGTTAGTTTGAATTTAC
GTTTGCAGAAGGTTTGCATTAAACGTATAAATTTTATACGTCTCAAGTAA
GCAAAAAAAGTTTTCTTTTAAATAATAGAGGTTTATAGCACAAAATGAAA
TATTTTTTCTGAGACACTAATGAAGGTGGGTTTATCTAACCTGTTAACAG
CTGGTCATAATTTTCTTACAAGCAGGGTAAACCTCGGAAGGCCCTTGAAA
ATTAACTATCTGAGGAAAATAGCCCTCCAGCAGATAATTCTACTACAAGA
ATCTTGTTGTGCACCGGAAGTTCAAAAGTTTAAATTTTCCTGATACTCGC
CCTATTTTTTAACACAAATTTGTTACTGATATTTTGTGATAACCTATCGT
CTTAGATCAGTTTCTCCCTGTTTATTATATATTGTGTAAAGTTTTTCATA
ATTTTTTGAGTGAATTTCACGTTTGCGAAAAAACCAAGTATTGTTTTGAG
AATGATGTATTGATGACAATACTTTGTGTAGTCCAAGGAAAAAAGATAAA
AAATAAAATCCTCAAAAAACTCATTATGACTAGAATTAAGAATGATATAA
ACAAGAAGAGATTCTTTTCAATCAATAAATTCAATTTCAAGGTAACTTTA
ATGGGTTTTTGAAAACTATGACGACTTTTTGGACAAATACTGCTCTGCTG
TTTTTTGGACACATACACGAGTTTAATATTCTCCATTTTCTAAGGAAATT
AGACCTATCACACTATTACAAGCGTTGAACGGAGAGAGTGAAGTGAATGA
GATTTCATGTTTCCATTCCTAGTCTGTCTCAAAGCAATTCATGAAAATTT
TGTTTATTCTTTAGTATCTATTTGTCTATTTTCCAATAATATATAGAATA
TCTTACAATATCTTATACAATAGTACAATCAAAATCAAATGGACCTTTTC
CCAAAAGTACATTTGTTAGATTTGTTAGATTTGTGAGAGGGTAGCAAACA
CATTGTTCGTTCTTTTGATAGATTATTGGCATTTTCCTATTATAAAGTCT
AACCAATCATAAATAAATATACAAGCGTTGTTGAGCGTTGTAAAACGTTG
CATAACGACTAAAATCAAGAAAGTGATAAATAAACTTAGCCCAATTAATA
AGTTGTGAAAATATTTCATTGTAAGATGGAACAATACTATAATAAAAATA
TTGTAATATATTTAAATTTTTCTTTATTTTTTAGGGTCATCCCAAACAAC
TATTACAAGGAGAAGAAAGTGTTGGAACCGGAAGTCACGCAATCACTATA
CGATGCTGTCAACACGCGTGATCTAGATACCAAATCCAAAGGTTTACGTA
GCAAGAAACTCAAACCAACTTATATCGTGCTCGACGATTATATATACAAG
TCCGATAATGATCCACCTCCCATTGAACATAAACCAAAGAAAAATGACGG
ATCTGAATCATTATCGCCAAAAGATTCGAAAGATTCTGTTGGTAAATCAC
CTATTGATTCTCTATTTGGTTTAGTGGAGAGTCTGGATTCTAGTATTGGA
CGACCAGTTATTGAAAGACAAGACGAATCAATAGACGATCCTACCACAAA
GCAAGATGAAAGGAAACGCACCAAATTGACTGCTGAAGATGAGACAGCAA
ATAAAAATGAGAAATCTTCTTCTAAAACTATTGAGAAACAACCGTCTAAA
AGCGCTGTAAAATCGTCTAATAAGGCTCCATCAGAAAAGCAAGCAACACC
GTCAAGTAAACAGTCAACGTCATCAAAATCGCTGAAACCTCCACTCGTTA
AAGAAACTTCACCGCAAGATAGTGACAGCAGTGATTCGATTATCAAGATT
CCCTTAGCTGGTCATAAAATTCAAGACATTGATCTCAAAAATTCCGTAGA
AACTCTTGGTTTATCTTCACCGAGATCGCCAGTTAAATCACCGGACCTGA
ATACAACCACGGATGGTTTAAAGGATATATCCACACCTTCGCCAGCTAAG
AAACTGAAGAAAGATAGTCTATCCTCTTCGACAGACGCCAAAGTAACGCC
GGATGAGAAGAGACGACGTAAAGGCAAGAAACTAGTCTATAACCCAAAAC
AAAGGAATCGTAAATTGAAATTGAGTAAAGAGACCAATAAGATTCAGTTA
ACTCCTGAGGAGATTATAAAAGAAGGCGCGTTACCTATTGTTAAAATTGA
AAAGAAAAAAGTTCAACGGAAACCTGCCGGTCAGAAACGTATCGATCCCA
TTGCGCTTGCTTTGAAGAACATCAAAAATCGCGAAAAGACGCGACGTCGG
CAACGAATGGGAATTGCGACACGGCGTGCATTGTCAACGTCACCGAACGA
TCTATTACGGAAAGCTGAACGTAAGGGCTTAAAGAAGAAGAAAAAGAGAG
TGAAAACAACGGAAGAAAAACGAGAAGAAGAACGTCTGAGACGCGAAGAA
GAAGCCAAAGAAGAAGCAATGAAACTCGAAAAAGCAAAACAAAAGGAATT
GAAACAACAGAAACGTCTTAGCGAACGTTCCGTCACAAGAAGCGTAGCGG
CCTCCCAAGAAGACGGCGTTTCAACGCGAAACCGCAAATACACACTTGGT
GAGAAAACAGCAGCAAAGATTGTCAAAAAGTCAAGGAATATTCAATCACA
ACGCATTTCAGCTGAGAGTAGAAAGAAAATGACACTACCCTTAACAGTAA
CTAGTAGCATGAATTTATCACCGATCGTCAAAATTGTAGATCATGGGTCG
CCTCCAAGGAATCAAACAATTGCCGTTTCTACAACGAATACAAAATCATC
TTCAACAATAACAAAACCGCCTTCGAAAAACTCGAGTAATACTAACGAGA
TTGATTTGACGTGTCACGAACAGATCGTATCTCCGGAGACTTTTAATTCG
TTCCCCGTACAACCTAAAAAGAACCGTCGTAAGCCATTACACGTTTTCAA
ATCGTTACCGAATCCGGCGACGACAGATCCAGCTACGGACGGTATATACA
CGGAATATAAAGACATTAATCAAATTGAAAAGACCGTTTCTACTCAAGAA
ACTCCCGTTACTACGAATACAACGACGTCTCTGTCTACCGCTACGACCAC
AATTTCAACAACTTCAACTTCGACAATAGCCACATCCACGTCTGAATCAG
AATTATTTGGAAAACCCTATAAAATCACGATATCACGAATGAACAGACCC
ACATTGATTCCTAGACGTTACCTACATTCAGACAGCTTAGCACCAGCTTA
TCAAACACTTGTCCAGCAACCCATCGTCAATAAACCGTCCCCATTCAAAC
AACTCCGAAAATCAACAGTCAATATTGTCGCTCGTCGGCAAAACACAGAA
AGCGACAATGCGTCAACGTCATCGACGGTGACGTCACCAACGATTGATGA
CGTCCCGTCAAACGGCAAAGATAACGAGAACGAAGAAAACAATAAAGACT
TAGAAAATGAAGACGGCGAAAAACGTGACCATGTTAATAAAAAAAGTGGG
AAACCGAAAAAGCGTAAAAAGCAAGCTATGTTCGATTTTCACGATACATT
AAAACCTATATCACGCTCTAATGAGGATATAAGAATCGGTGATATTATTT
GGGGTAAAGTCATGGGATACGGCTGGTGGCCTGGGAAAGTCGTGTCTAAG
TTCTATGATGGATCAGAGTCTACTATTCGACGTGTTTTCTGTACATGGTT
GGGCTCTAATACAAATTCCACAATGAATATTCGTGATTTGGAATTGTTTT
TACCGAATTTTGAAAAACGTTTCGATGTGAAGAAAAATTCTAATTCGTAC
ACCAAAGCGGTTGTGGAAGCGCAACATTGTTGCCGTACGAAATATGGCTT
GAAATAAGAAATTACTCTGTATTACTTTGTTGTTCAATTGTTAAATAATA
TTTTTAGTTCGGGCTTTCTTTTTTCTAATTTGAGCTCTTGATCTTAAAAC
GAAAATCTAGTGTATATAATATTAAGGATTATAAATTTGGAATATTTTTT
TCTACTATGGTATGTTAGAGACTTAGTTTGGCTTCTTAGGGTGTTTTTGG
CTAATGTTTTCTTTTAAGGTAGTATACATAAAGGAGTAAATGTTTGTCAA
CTTAAATTTTAAGGCTTGCTTAGACAACTTTGTCGAGGAAGGCTCTCGAT
TGAAATCCAGTTCCTTTTATTCACGTTCATGTATGTTTTTGGACTATCAA
TCTCTTATGTGTGTAGGTCTCGATGTGTCACTTACTAGTTGTAACCTATT
CATTTCCAAACTTGAAAAAAGTTCATTGAATCCGATTTTGTAGATCCCAG
TTCCAATTATCCTTTTCCTCGATTAGGTTTTTTTTATTTCAAAACCATTG
TTTTTTGTATATAATTTATTTTATTTTCGCGAAATCTTATAACAGAGTGT
ACAATTTTATACATTTTGTAATTTTATTCTAGTTTTCCGTCCCATTTTTG
TTACTACCTTATCGGGGAAAACTTCGTCGGGGAAAATTTTCGTCGGGGAA
ACTTTTCGTCGGGGAAAAATATTCGTCACTTGCTGGTAGTTGGTAAACGC
ATTAAGGCTGGGGAAAATTTTCGTCGGGGAAAAATATTGGTCACTTGGCC
AAAATTTCGTCACTTTTCCCCGACGAAGTTTTCCCCGATAAGGTATTCAA
TTTCTGTTTCTTTTAAAAGGTTA Coding sequence (CDS) from alignment at scaffold_108:449376..460698- >TCONS_00046308 ID=TCONS_00046308|Name=TCONS_00046308|organism=Clytia hemisphaerica|type=CDS|length=5532bp|location=Sequence derived from alignment at scaffold_108:449376..460698- (Clytia hemisphaerica)
GGTCATCCCAAACAACTATTACAAGGAGAAGAAAGTGTTGGAACCGGAAG
TCACGCAATCACTATACGATGCTGTCAACACGCGTGATCTAGATACCAAA
TCCAAAGGTTTACGTAGCAAGAAACTCAAACCAACTTATATCGTGCTCGA
CGATTATATATACAAGTCCGATAATGATCCACCTCCCATTGAACATAAAC
CAAAGAAAAATGACGGATCTGAATCATTATCGCCAAAAGATTCGAAAGAT
TCTGTTGGTAAATCACCTATTGATTCTCTATTTGGTTTAGTGGAGAGTCT
GGATTCTAGTATTGGACGACCAGTTATTGAAAGACAAGACGAATCAATAG
ACGATCCTACCACAAAGCAAGATGAAAGGAAACGCACCAAATTGACTGCT
GAAGATGAGACAGCAAATAAAAATGAGAAATCTTCTTCTAAAACTATTGA
GAAACAACCGTCTAAAAGCGCTGTAAAATCGTCTAATAAGGCTCCATCAG
AAAAGCAAGCAACACCGTCAAGTAAACAGTCAACGTCATCAAAATCGCTG
AAACCTCCACTCGTTAAAGAAACTTCACCGCAAGATAGTGACAGCAGTGA
TTCGATTATCAAGATTCCCTTAGCTGGTCATAAAATTCAAGACATTGATC
TCAAAAATTCCGTAGAAACTCTTGGTTTATCTTCACCGAGATCGCCAGTT
AAATCACCGGACCTGAATACAACCACGGATGGTTTAAAGGATATATCCAC
ACCTTCGCCAGCTAAGAAACTGAAGAAAGATAGTCTATCCTCTTCGACAG
ACGCCAAAGTAACGCCGGATGAGAAGAGACGACGTAAAGGCAAGAAACTA
GTCTATAACCCAAAACAAAGGAATCGTAAATTGAAATTGAGTAAAGAGAC
CAATAAGATTCAGTTAACTCCTGAGGAGATTATAAAAGAAGGCGCGTTAC
CTATTGTTAAAATTGAAAAGAAAAAAGTTCAACGGAAACCTGCCGGTCAG
AAACGTATCGATCCCATTGCGCTTGCTTTGAAGAACATCAAAAATCGCGA
AAAGACGCGACGTCGGCAACGAATGGGAATTGCGACACGGCGTGCATTGT
CAACGTCACCGAACGATCTATTACGGAAAGCTGAACGTAAGGGCTTAAAG
AAGAAGAAAAAGAGAGTGAAAACAACGGAAGAAAAACGAGAAGAAGAACG
TCTGAGACGCGAAGAAGAAGCCAAAGAAGAAGCAATGAAACTCGAAAAAG
CAAAACAAAAGGAATTGAAACAACAGAAACGTCTTAGCGAACGTTCCGTC
ACAAGAAGCGTAGCGGCCTCCCAAGAAGACGGCGTTTCAACGCGAAACCG
CAAATACACACTTGGTGAGAAAACAGCAGCAAAGATTGTCAAAAAGTCAA
GGAATATTCAATCACAACGCATTTCAGCTGAGAGTAGAAAGAAAATGACA
CTACCCTTAACAGTAACTAGTAGCATGAATTTATCACCGATCGTCAAAAT
TGTAGATCATGGGTCGCCTCCAAGGAATCAAACAATTGCCGTTTCTACAA
CGAATACAAAATCATCTTCAACAATAACAAAACCGCCTTCGAAAAACTCG
AGTAATACTAACGAGATTGATTTGACGTGTCACGAACAGATCGTATCTCC
GGAGACTTTTAATTCGTTCCCCGTACAACCTAAAAAGAACCGTCGTAAGC
CATTACACGTTTTCAAATCGTTACCGAATCCGGCGACGACAGATCCAGCT
ACGGACGGTATATACACGGAATATAAAGACATTAATCAAATTGAAAAGAC
CGTTTCTACTCAAGAAACTCCCGTTACTACGAATACAACGACGTCTCTGT
CTACCGCTACGACCACAATTTCAACAACTTCAACTTCGACAATAGCCACA
TCCACGTCTGAATCAGAATTATTTGGAAAACCCTATAAAATCACGATATC
ACGAATGAACAGACCCACATTGATTCCTAGACGTTACCTACATTCAGACA
GCTTAGCACCAGCTTATCAAACACTTGTCCAGCAACCCATCGTCAATAAA
CCGTCCCCATTCAAACAACTCCGAAAATCAACAGTCAATATTGTCGCTCG
TCGGCAAAACACAGAAAGCGACAATGCGTCAACGTCATCGACGGTGACGT
CACCAACGATTGATGACGTCCCGTCAAACGGCAAAGATAACGAGAACGAA
GAAAACAATAAAGACTTAGAAAATGAAGACGGCGAAAAACGTGACCATGT
TAATAAAAAAAGTGGGAAACCGAAAAAGCGTAAAAAGCAAGCTATGTTCG
ATTTTCACGATACATTAAAACCTATATCACGCTCTAATGAGGATATAAGA
ATCGGTGATATTATTTGGGGTAAAGTCATGGGATACGGCTGGTGGCCTGG
GAAAGTCGTGTCTAAGTTCTATGATGGATCAGAGTCTACTATTCGACGTG
TTTTCTGTACATGGTTGGGCTCTAATACAAATTCCACAATGAATATTCGT
GATTTGGAATTGTTTTTACCGAATTTTGAAAAACGTTTCGATGTGAAGAA
AAATTCTAATTCGTACACCAAAGCGGTTGTGGAAGCGCAACATTGTTGCC
GTACGAAATATGGCTTGAAATAAATGAAAGATAGACTCAAAGTTGGTAGT
AGAGTCAGCTGTGTTATAGAAGGCATATTCCCAAACTTTATACACCTATC
TTTTCGGTCAGCAGGTGTCGTCTATCGAGGTGTCCTGTTAAATGAAACTT
GCTCAACTGTGAAAAGGGTCATCCCAAACAACTATTACAAGGAGAAGAAA
GTGTTGGAACCGGAAGTCACGCAATCACTATACGATGCTGTCAACACGCG
TGATCTAGATACCAAATCCAAAGGTTTACGTAGCAAGAAACTCAAACCAA
CTTATATCGTGCTCGACGATTATATATACAAGTCCGATAATGATCCACCT
CCCATTGAACATAAACCAAAGAAAAATGACGGATCTGAATCATTATCGCC
AAAAGATTCGAAAGATTCTGTTGGTAAATCACCTATTGATTCTCTATTTG
GTTTAGTGGAGAGTCTGGATTCTAGTATTGGACGACCAGTTATTGAAAGA
CAAGACGAATCAATAGACGATCCTACCACAAAGCAAGATGAAAGGAAACG
CACCAAATTGACTGCTGAAGATGAGACAGCAAATAAAAATGAGAAATCTT
CTTCTAAAACTATTGAGAAACAACCGTCTAAAAGCGCTGTAAAATCGTCT
AATAAGGCTCCATCAGAAAAGCAAGCAACACCGTCAAGTAAACAGTCAAC
GTCATCAAAATCGCTGAAACCTCCACTCGTTAAAGAAACTTCACCGCAAG
ATAGTGACAGCAGTGATTCGATTATCAAGATTCCCTTAGCTGGTCATAAA
ATTCAAGACATTGATCTCAAAAATTCCGTAGAAACTCTTGGTTTATCTTC
ACCGAGATCGCCAGTTAAATCACCGGACCTGAATACAACCACGGATGGTT
TAAAGGATATATCCACACCTTCGCCAGCTAAGAAACTGAAGAAAGATAGT
CTATCCTCTTCGACAGACGCCAAAGTAACGCCGGATGAGAAGAGACGACG
TAAAGGCAAGAAACTAGTCTATAACCCAAAACAAAGGAATCGTAAATTGA
AATTGAGTAAAGAGACCAATAAGATTCAGTTAACTCCTGAGGAGATTATA
AAAGAAGGCGCGTTACCTATTGTTAAAATTGAAAAGAAAAAAGTTCAACG
GAAACCTGCCGGTCAGAAACGTATCGATCCCATTGCGCTTGCTTTGAAGA
ACATCAAAAATCGCGAAAAGACGCGACGTCGGCAACGAATGGGAATTGCG
ACACGGCGTGCATTGTCAACGTCACCGAACGATCTATTACGGAAAGCTGA
ACGTAAGGGCTTAAAGAAGAAGAAAAAGAGAGTGAAAACAACGGAAGAAA
AACGAGAAGAAGAACGTCTGAGACGCGAAGAAGAAGCCAAAGAAGAAGCA
ATGAAACTCGAAAAAGCAAAACAAAAGGAATTGAAACAACAGAAACGTCT
TAGCGAACGTTCCGTCACAAGAAGCGTAGCGGCCTCCCAAGAAGACGGCG
TTTCAACGCGAAACCGCAAATACACACTTGGTGAGAAAACAGCAGCAAAG
ATTGTCAAAAAGTCAAGGAATATTCAATCACAACGCATTTCAGCTGAGAG
TAGAAAGAAAATGACACTACCCTTAACAGTAACTAGTAGCATGAATTTAT
CACCGATCGTCAAAATTGTAGATCATGGGTCGCCTCCAAGGAATCAAACA
ATTGCCGTTTCTACAACGAATACAAAATCATCTTCAACAATAACAAAACC
GCCTTCGAAAAACTCGAGTAATACTAACGAGATTGATTTGACGTGTCACG
AACAGATCGTATCTCCGGAGACTTTTAATTCGTTCCCCGTACAACCTAAA
AAGAACCGTCGTAAGCCATTACACGTTTTCAAATCGTTACCGAATCCGGC
GACGACAGATCCAGCTACGGACGGTATATACACGGAATATAAAGACATTA
ATCAAATTGAAAAGACCGTTTCTACTCAAGAAACTCCCGTTACTACGAAT
ACAACGACGTCTCTGTCTACCGCTACGACCACAATTTCAACAACTTCAAC
TTCGACAATAGCCACATCCACGTCTGAATCAGAATTATTTGGAAAACCCT
ATAAAATCACGATATCACGAATGAACAGACCCACATTGATTCCTAGACGT
TACCTACATTCAGACAGCTTAGCACCAGCTTATCAAACACTTGTCCAGCA
ACCCATCGTCAATAAACCGTCCCCATTCAAACAACTCCGAAAATCAACAG
TCAATATTGTCGCTCGTCGGCAAAACACAGAAAGCGACAATGCGTCAACG
TCATCGACGGTGACGTCACCAACGATTGATGACGTCCCGTCAAACGGCAA
AGATAACGAGAACGAAGAAAACAATAAAGACTTAGAAAATGAAGACGGCG
AAAAACGTGACCATGTTAATAAAAAAAGTGGGAAACCGAAAAAGCGTAAA
AAGCAAGCTATGTTCGATTTTCACGATACATTAAAACCTATATCACGCTC
TAATGAGGATATAAGAATCGGTGATATTATTTGGGGTAAAGTCATGGGAT
ACGGCTGGTGGCCTGGGAAAGTCGTGTCTAAGTTCTATGATGGATCAGAG
TCTACTATTCGACGTGTTTTCTGTACATGGTTGGGCTCTAATACAAATTC
CACAATGAATATTCGTGATTTGGAATTGTTTTTACCGAATTTTGAAAAAC
GTTTCGATGTGAAGAAAAATTCTAATTCGTACACCAAAGCGGTTGTGGAA
GCGCAACATTGTTGCCGTACGAAATATGGCTTGAAATAAATGAAAGATAG
ACTCAAAGTTGGTAGTAGAGTCAGCTGTGTTATAGAAGGCATATTCCCAA
ACTTTATACACCTATCTTTTCGGTCAGCAGGTGTCGTCTATCGAGGTGTC
CTGTTAAATGAAACTTGCTCAACTGTGAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046308-exon-scaffold_108-1575043694:460333..460698 | TCONS_00046308-exon-scaffold_108-1575043694:460333..460698 | Clytia hemisphaerica | exon |
| TCONS_00046308-exon-scaffold_108-1575043694:449376..452814 | TCONS_00046308-exon-scaffold_108-1575043694:449376..452814 | Clytia hemisphaerica | exon |
| TCONS_00046308-exon-scaffold_108-1510915933:460333..460698 | TCONS_00046308-exon-scaffold_108-1510915933:460333..460698 | Clytia hemisphaerica | exon |
| TCONS_00046308-exon-scaffold_108-1510915933:449376..452814 | TCONS_00046308-exon-scaffold_108-1510915933:449376..452814 | Clytia hemisphaerica | exon |
| TCONS_00046308-exon-scaffold_108-1491911889:460333..460698 | TCONS_00046308-exon-scaffold_108-1491911889:460333..460698 | Clytia hemisphaerica | exon |
| TCONS_00046308-exon-scaffold_108-1491911889:449376..452814 | TCONS_00046308-exon-scaffold_108-1491911889:449376..452814 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_108 | supercontig | scaffold_108:449376..460698 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000313 | PWWP_dom |
Blast
The following BLAST results are available for this feature:
|
