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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046663 ID=TCONS_00046663|Name=TCONS_00046663|organism=Clytia hemisphaerica|type=transcript|length=785bp
GattttttctccatttcttttttccaaataaattattttgtaaaCAAACG
TCTAAGGTAAGTCATAAAAAGGCGAAAAAATGGGCAATGAAAAACTTGGG
ATAAAGTGGGATAACATACATATTATCTGTAAATATACAATTCTATACAA
CATACTGTTATATGTTTAAACAACGAATTTCCATCACGACTTCATTATAT
TCTCATATAAATTATGTTCTTGTAATCATCAAAGCATAATTCATGCATCT
TGCCACCGTTCCAATCCCTTTGAATAACTTAATAATTTTGGCAGCCTTTG
AGATCCATCTTTCATCACACAAAATGATCTGCCCATGCTTCAGTACGTTA
TTAATCTCGAAAAAGTATATCGGTTTAAAGGCCGGCCttcacttgcgcgc
gctgcgatcgcattTTTTGgctaatattttttttgcttgaaaaaaaagat
tacgtcataaaaatgtagcgcgtgCTCGAAAAAATCAGTTGGACACAttt
atcaacttttttcaatcgttacgtcagatcgcgccaacgcagttgcttca
tttttcttttaaccaATAGCTTGGaagctttgcttgaaaaagtgcgatcg
aaacGCGTACAAGTGGAGAGTATAATTCCTCCCATTTTCAATAAATGAGC
TTATTACTCAATTGATTACCTATCTTCAGAATCACTTTCTCCATCATCAA
TACCAAGTGCTTCCATGAAAGCGTACGCTACTTTTTCAGCATAATCTTTC
CGTGCGTCTCCATCGAGGTTTTGTGCTTGCTCTAA Run BLAST on NCBI transcript from alignment at scaffold_116:600954..601914+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046663 ID=TCONS_00046663|Name=TCONS_00046663|organism=Clytia hemisphaerica|type=transcript|length=961bp|location=Sequence derived from alignment at scaffold_116:600954..601914+ (Clytia hemisphaerica)
GattttttctccatttcttttttccaaataaattattttgtaaaCAAACG
TCTAAGGTAAGTCATAAAAAGGCGAAAAAATGGGCAATGAAAAACTTGGG
ATAAAGTGGGATAACATCccggggggcagctgggcaaaaggaccgacggg
tatgtgcgggtcctaagggtaccttttccaatatgtttaaaatgcactgt
aagggtcggaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNgccccccccccccccggggataaCATACATACATATT
ATCTGTAAATATACAATTCTATACAACATACTGTTATATGTTTAAACAAC
GAATTTCCATCACGACTTCATTATATTCTCATATAAATTATGTTCTTGTA
ATCATCAAAGCATAATTCATGCATCTTGCCACCGTTCCAATCCCTTTGAA
TAACTTAATAATTTTGGCAGCCTTTGAGATCCATCTTTCATCACACAAAA
TGATCTGCCCATGCTTCAGTACGTTATTAATCTCGAAAAAGTATATCGGT
TTAAAGGCCGGCCttcacttgcgcgcgctgcgatcgcattTTTTGgctaa
tattttttttgcttgaaaaaaaagattacgtcataaaaatgtagcgcgtg
CTCGAAAAAATCAGTTGGACACAtttatcaacttttttcaatcgttacgt
cagatcgcgccaacgcagttgcttcatttttcttttaaccaATAGCTTGG
aagctttgcttgaaaaagtgcgatcgaaacGCGTACAAGTGGAGAGTATA
ATTCCTCCCATTTTCAATAAATGAGCTTATTACTCAATTGATTACCTATC
TTCAGAATCACTTTCTCCATCATCAATACCAAGTGCTTCCATGAAAGCGT
ACGCTACTTTTTCAGCATAATCTTTCCGTGCGTCTCCATCGAGGTTTTGT
GCTTGCTCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046663-exon-scaffold_116-1491911889:600954..601068 | TCONS_00046663-exon-scaffold_116-1491911889:600954..601068 | Clytia hemisphaerica | exon |
| TCONS_00046663-exon-scaffold_116-1510915933:600954..601068 | TCONS_00046663-exon-scaffold_116-1510915933:600954..601068 | Clytia hemisphaerica | exon |
| TCONS_00046663-exon-scaffold_116-1575043694:600954..601068 | TCONS_00046663-exon-scaffold_116-1575043694:600954..601068 | Clytia hemisphaerica | exon |
| TCONS_00046663-exon-scaffold_116-1491911889:601245..601914 | TCONS_00046663-exon-scaffold_116-1491911889:601245..601914 | Clytia hemisphaerica | exon |
| TCONS_00046663-exon-scaffold_116-1510915933:601245..601914 | TCONS_00046663-exon-scaffold_116-1510915933:601245..601914 | Clytia hemisphaerica | exon |
| TCONS_00046663-exon-scaffold_116-1575043694:601245..601914 | TCONS_00046663-exon-scaffold_116-1575043694:601245..601914 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_116 | supercontig | scaffold_116:600954..601914 + |
Blast
The following BLAST results are available for this feature:
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