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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051454 ID=TCONS_00051454|Name=TCONS_00051454|organism=Clytia hemisphaerica|type=transcript|length=1119bp
TTCTCAACCAAGATTTCAAGAATTACTAAAAAGTAGGTTACTAATTTGAA
ACTAACTTTTATTCAGCAGAAAAGAGCTGAAAACACCAGTCAGCTAAATT
TTAAACTGAAATATATCTTGACTGAAAAGTCTGCATGGCAGAATATTGGG
TGCGTTGGTCAAANGAATACATTTTTATAAAACGATTTAAGCAACTGTTA
AGCGTCCAACAATAGGAGCACTCGCACATAAGAAGACTTGCGACACTCAA
CACGCAGATTATAATAGGCTTTTGACCTGTTTTAAATAGCTTGAGTGTCC
CTATTAATTCGAGGCTACGAGTCGCCAATAAATAGGTTTTCAATAGTGAA
AGAAGCCGCTTGCGAGTCCCTGACACGCAAGGTTCGCGTACGTGTAAAGA
CATGCGAAAGCCCCACTGTACGTTGTTATTATTGATTATTTActtgtttt
tgaaatatatcCATGATAAGTATTAAAAATCTGTGAATTATCATTAAAAA
GTGTctattttccatctgcttgtaaatttagaaatggcccatTTTTTTGT
CGGTCTTAATTAacagtcggcccttagtgactaaattttgacgaggtgac
taaaattagggccgactaataattaaggccgactaaaattaagaccgact
aagttttggccgataaggtaggtaAAGAATATTATTAAAAATGTCAGAAG
TTTGCATTGGctttagtttagacggccgactttctgccctgtctTTTCGA
ATTGTTAGAGTAGACAAGAGTAGGCAGGACATCGgtagtggaaatttttg
cttgagATTTCATAagagagtttatgtatttgcctTTTTGAGGACGGCGG
AGTAACtgccaagcgatttggaataacccgcagttctgcccgcaaagacg
gtaaaagtgctaatTTACCCTTGTCACCAGGATCTAGCCAAATCAAAGCC
TGGGCGTCCCCGTCCCAGAAAATCACAGATACATAACTCGCCATGATTAA
AATAGACAGGGCGAAATGTGGGCCGTCTAAATCCAAGTCAACACTTATAA
TAAAACCAAAAGTATATGATACATGTATAAAAATGAAACGTCATTCGAAC
ATGTTTTTTCCTATCCACC Run BLAST on NCBI transcript from alignment at scaffold_201:344064..345182 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051454 ID=TCONS_00051454|Name=TCONS_00051454|organism=Clytia hemisphaerica|type=transcript|length=1119bp|location=Sequence derived from alignment at scaffold_201:344064..345182 (Clytia hemisphaerica)
GGTGGATAGGAAAAAACATGTTCGAATGACGTTTCATTTTTATACATGTA
TCATATACTTTTGGTTTTATTATAAGTGTTGACTTGGATTTAGACGGCCC
ACATTTCGCCCTGTCTATTTTAATCATGGCGAGTTATGTATCTGTGATTT
TCTGGGACGGGGACGCCCAGGCTTTGATTTGGCTAGATCCTGGTGACAAG
GGTAAattagcacttttaccgtctttgcgggcagaactgcgggttattcc
aaatcgcttggcaGTTACTCCGCCGTCCTCAAAAaggcaaatacataaac
tctctTATGAAATctcaagcaaaaatttccactacCGATGTCCTGCCTAC
TCTTGTCTACTCTAACAATTCGAAAagacagggcagaaagtcggccgtct
aaactaaagCCAATGCAAACTTCTGACATTTTTAATAATATTCTTtacct
accttatcggccaaaacttagtcggtcttaattttagtcggccttaatta
ttagtcggccctaattttagtcacctcgtcaaaatttagtcactaagggc
cgactgtTAATTAAGACCGACAAAAAAatgggccatttctaaatttacaa
gcagatggaaaatagACACTTTTTAATGATAATTCACAGATTTTTAATAC
TTATCATGgatatatttcaaaaacaagTAAATAATCAATAATAACAACGT
ACAGTGGGGCTTTCGCATGTCTTTACACGTACGCGAACCTTGCGTGTCAG
GGACTCGCAAGCGGCTTCTTTCACTATTGAAAACCTATTTATTGGCGACT
CGTAGCCTCGAATTAATAGGGACACTCAAGCTATTTAAAACAGGTCAAAA
GCCTATTATAATCTGCGTGTTGAGTGTCGCAAGTCTTCTTATGTGCGAGT
GCTCCTATTGTTGGACGCTTAACAGTTGCTTAAATCGTTTTATAAAAATG
TATTCNTTTGACCAACGCACCCAATATTCTGCCATGCAGACTTTTCAGTC
AAGATATATTTCAGTTTAAAATTTAGCTGACTGGTGTTTTCAGCTCTTTT
CTGCTGAATAAAAGTTAGTTTCAAATTAGTAACCTACTTTTTAGTAATTC
TTGAAATCTTGGTTGAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051454-exon-scaffold_201-1491911889:344064..345182 | TCONS_00051454-exon-scaffold_201-1491911889:344064..345182 | Clytia hemisphaerica | exon |
| TCONS_00051454-exon-scaffold_201-1510915933:344064..345182 | TCONS_00051454-exon-scaffold_201-1510915933:344064..345182 | Clytia hemisphaerica | exon |
| TCONS_00051454-exon-scaffold_201-1575043694:344064..345182 | TCONS_00051454-exon-scaffold_201-1575043694:344064..345182 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_201 | supercontig | scaffold_201:344064..345182 . |
Blast
The following BLAST results are available for this feature:
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