TCONS_00053285 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053285
Unique NameTCONS_00053285
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1676

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053285 ID=TCONS_00053285|Name=TCONS_00053285|organism=Clytia hemisphaerica|type=transcript|length=1676bp
ggaatgaaataaaaattgaataatacGAACGGAGTTTCCGCGGAAAACCA
AAGACACAAAATCATTTCGGGAATTTTGTCCCATTATGCAAAAGCAGCCA
GCGAGACgaccttttttccgatgtgttctgagaccatatttcagctagaa
attttgatctgttctgaccagatcttcgaaaattaatcagctacaAATGA
TGATGTGTTCTGGTGAGACAGtggtataatcaaggtcatctaCTGTGTTT
TTGTTGTCTAGGTAgccctagaaagcttcagaacataTCTTCTTTTAAGT
AGACACGTATAATCCCcgtataatcaagagaaaatttatgtaatcttgtt
gcctagtaaatTTTCataacacatctttcgtggagcaaaacaaatatatt
acaagtttatcttggcaaactgtttttcctagattttagagcacatcaaa
ccataaagtaatgataagtttagggagacaaatagggcgatagaaatcag
aacacataaTTTGTATGGAAAATTTAATGGTTAATggtcataacatttgg
tctcttaagataagaacacatatttctaaaaaatctcggCTGCTTTTGCA
TTATATGTTCGTCAAAAAAATGATAGGTTTTCAATCATTCAACGACCGTT
TTCGAAACCCTTAGTACGATATGTTCACAACCTAGTCAAATATTAAATAT
CCCTTCAGCTTTTTTTTATATTCCGATCCGTAAAATACACACCTTTAAAA
AGTTCAGCTAGAGTACAGCGAAATTGAACCTTTATCGACAAACGAACAAG
TGCAAAATTATAGTACGGTAGAGACTTTAACTCTAATTTCTcgttaactc
gaacaagtttacTCGTCGCTTCAAATAACAATTTGCCTTAAATCttattc
cataactcgaaaattccttaactcgaacaaatttgtgttcctcgcGCAGA
TTCGAGTTCTAGACGCTCGACGGTTTAACAAACGAAGTGCTAAATTATGA
TATTATGGTTTTCTTAGAAAGACGTACAATTTTTGATTATCGATAAACAG
ACAGTGAaagctcaaaaatttaaaagattttccatACTTGTATGCCAAAA
TGTTTTTGCCAGATACGAAGGCAATTTGTAGACGCACACGTAAAGTACCT
CTTATAAAGAAGAAAAGGTGGCCCCTAATGGAGAATGACAAGCAACCCTA
TAATTTTTTGACGCAAAAATATTCTCCTTTGAAGTCAGTACTGTCACGCT
ATCGTGAAAATTCTCTGATCAAAATCTACAGGAAATTCACGATATTCATA
TAGCTTATTGTTGCAACACATGGCAAGTTCCATGGGTTTCCGAGGTAAAC
TTTGACTCCATAAAATTGTTGTGCTTTTAGATTATCAACAGCGTGAACCT
TTTCTCCATTTATTTCAATCGAATACTCGTAAACGCCTCCGTTTTTATAT
CTTTGGCTGATCTTTATTTGGTACTGGTTATTGAACTCGATAGGAAGATC
GAATTTATGGTTGAAATCATTTCCTACAGTGGACGCAATCTGTAGTCTCC
CATCAATACTATTATAAAATATTGCCGGTGTACGCTCGCCATGCAAACCT
TGATCATCGCCTTTTGTCATATGGAGTACGGAACACCAATGCCCTCCTGG
TATTCCAGTGTTTACATGATTTGCAT
Run BLAST on NCBI

transcript from alignment at scaffold_228:280154..290849+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053285 ID=TCONS_00053285|Name=TCONS_00053285|organism=Clytia hemisphaerica|type=transcript|length=10696bp|location=Sequence derived from alignment at scaffold_228:280154..290849+ (Clytia hemisphaerica)
ggaatgaaataaaaattgaataatacGAACGGAGTTTCCGCGGAAAACCA
AAGACACAAAATCATTTCGGGAATTTTGTCCCATTATGCAAAAGCAGCCA
GCGAGACgaccttttttccgatgtgttctgagaccatatttcagctagaa
attttgatctgttctgaccagatcttcgaaaattaatcagctacaAATGA
TGATGTGTTCTGGTGAGACAGtggtataatcaaggtcatctaCTGTGTTT
TTGTTGTCTAGGTAgccctagaaagcttcagaacataTCTTCTTTTAAGT
AGACACGTATAATCCCcgtataatcaagagaaaatttatgtaatcttgtt
gcctagtaaatTTTCataacacatctttcgtggagcaaaacaaatatatt
acaagtttatcttggcaaactgtttttcctagattttagagcacatcaaa
ccataaagtaatgataagtttagggagacaaatagggcgatagaaatcag
aacacataaTTTGTATGGAAAATTTAATGGTTAATggtcataacatttgg
tctcttaagataagaacacatatttctaaaaaatctcggCTGCTTTTGCA
TTATATGTTCGTCAAAAAAATGATAGGTTTTCAATCATTCAACGACCGTT
TTCGAAACCCTTAGTACGATATGTTCACAACCTAGTCAAATATTAAATAT
CCCTTCAGCTTTTTTTTATATTCCGATCCGTAAAATACACACCTTTAAAA
AGTTCAGCTAGAGTACAGCGAAATTGAACCTTTATCGACAAACGAACAAG
TGCAAAATTATAGTACGGTAGAGACTTTAACTCTAATTTCTcgttaactc
gaacaagtttacTCGTCGCTTCAAATAACAATTTGCCTTAAATCttattc
cataactcgaaaattccttaactcgaacaaatttgtgttcctcgcGCAGA
TTCGAGTTCTAGACGCTCGACGGTTTAACAAACGAAGTGCTAAATTATGA
TATTATGGTTTTCTTAGAAAGACGTACAATTTTTGATTATCGATAAACAG
ACAGTGAaagctcaaaaatttaaaagattttccatACTTGTATGCCAAAA
TGTTTTTGCCAGATACGAAGGCAATTTGTAGACACACACGTAAAGTACCT
CTTATAAAGAAGAAAAGGTGGCCCCTAATGGAGAATGACAAGCAACCCTA
TAATTTTTTGacgcaaaaatattttcctttgaagTCAGTACTGTCACGCT
ATCGTGAAAATTCTCTGATCAAAATCTACAGGAAATTCACGATATTCATA
TAGCTTATCGTTGCAACACACGGTGTCTTCCATGGGTTTCCGAGGTAAAC
TTTGACTCCATAAAATTGTCGTGCTTTTAGATTATCCACAGCGTGAACCT
TTTCTCCATTTATTTCAATCGAATACTCGTAAACACCTCCGTTTTTATAT
CTTTGGCTGATCTTTATATGGTACTGGTTATTGAACTCGATAAGACGATT
GAAGCTATGATCGAAATCATTCCCTACAGATGAAAAAAGCCATATTTTCC
CATCAACCTTATAATGATATATTGCCGGTGTACGATCGCCATGAGAGCCT
AGTTCATCGCCTTTTGTCATATGGAATACTGAACACCAATCCCCTCCTGG
TATTCCAGTGTTTACATGATTTGCATTCATTGTCAGGTTCAATTCGACCT
CCCATTCCGGTGATAAAATGGGTAATGTctttttgagattattttgTTGA
ACAGCTTCAGCTAAAAtagattagattttttttttacgcTCTAGATTGAT
TCATTTGAAATTGGAGTATTGAAATGACTGAaatgtctgaaaattttgca
atagacgatatcggctatatataaaaactcagatttgacctccgagaatt
ccccacaatgctttgtgcggaaaaaatttcacGAATGGACTTTATAAGTT
TACGCTCGACCAGCAAGGATTTGTGATTCTTTTTATGTTACCTTTGTTGG
TGATGACTATTGGTTGAATTCCATGTCTGTTCTCGGGAACCtgtatttaa
aaagaaaataaagataagATTTTCTTTAACTTCTTTAATAcccgaaaaat
caaaaaacaatttttttgaaatcgcaAACTTTGAAGTGAATTGTCTTGGC
TTTGACGAAAGTAATTTAGTTCATTTTCCGGTTCGTTAGAAAACTCGTTT
CAAAAGCTATCTCTTCAGCATGCCACTTTTTTGAATAAGGTCCTCAAATA
AATCTACGGCGACTAAAAAATGTATTTCAAGGCATAAAATTAGCTGGTGC
GGTATGGAAAGAGTTATCACTGGCAATCATTTTCTCTAATCCTGGAATAA
AACTTGACGGATTTTGCGGATTTGAATTCTTACGCGAAATTATTGTCAat
atggaaatttggaaaggtctTCCCAACTgacacaaaacgttgtttcaacg
ttcatgtaaggttaaatggacgttgtgaacattaaattgacgttgaaaca
acgttgtgtggcaGCTGGGTTATctgcgaaatatttttaaaaacaaaact
caaaaatgtcGAATAAATGAAAGAAGAAGCATTAttaatgcgtatttcaa
cacAACCATTATGTATGATTTGGCTGGGAAAGGCACAacatcgtgaaaat
attgtctcacAATAGTGCCTTATGTGTGCCagccagatggtgaaattttc
atccgacacgctaaagctctgaaggtttTTGTTCTAATAAAGAAAGCAAA
TCCTGTGCCGTTTGAAAAACATTCTGAAAATTATATGATACAAACCTGTC
TTTTACATCTCTGTGTAACTGTGGATgaaattccaaataaaaaacaaaat
gctaCCAAAAAATGCATTGCTGAAAACGTAGTTTAATGTCTAAGCGTTTA
ACTTAGGGCGCTTGAACGATGATATTGTTTATGTTACTATGCTacttttt
ttctcccttttttttagttcaaaatatttaatgaTTTATTTTGAACTAAC
NGGTATTTTAATGTCTAAGCGTTTAACTTAGGGCGCTTGAACGATGATAT
TGTTTATGTTACTATGCTactttttttctcccttttttttagttcaaaat
ttttaatgatttattttgaactaaccgaaattgttaataatttataataa
tttattttgaaCTAACCGAAATTGAATTCACTAAgaattttaatttattc
attCCTAAATTTATGTTTGACGGAATTTTCCTTAATTATTCATATGTTTT
AATTGAAGAACTAAGCAAAGGCGCCTGAAGCATAATTCagcttttataaa
taaaatagaatCGGCAAAGCTGGCATTTTAGCAtactttttgcaaatatt
tggTGAAATTtccgacttcaagtcgtcttgtttaagGAGAGGATTTACTT
GCATGACATTTACTGACATTTCTATTCACTTTTTATCAAAGTAAACAAGC
NTAAAAGCCGGCATTTCAGCATacttttttgcaaatatttgttgaaattt
ccgacttcaagtcgtcttgtttcctttttttgtacattaaagggacataa
cagtacttgcgaaatatgtaaacaaactgtatgcagcggatacaaaatca
aaacaaatgtcacatgtcaaaataaaaaatcaaactaaatatggctaatt
ttgattggtcaattgttttacaagtttgttttggacacgtgattttaatt
gttctcttttatgacacgtggttcgcgcaatgtttacattttactacttt
tactGACATTTCTATTCACTTTTTATCAAagtaaacaagacgacttaaag
tcgaaaatttcgcataatacttgaacatcaacgacgaagacgcgtgaaac
gtgactcctgcagcattatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATAAgagattaa
acaaaataaaatcaccaatttttcgaattttgtttgtaattctcttcttc
attcttctgttattttctgaagtttggGAAATTATGAtactaaaaatttc
tttggctgagcctcaaggtatgcttagcatatgcttaatttttctggaaa
tttgagcttcagtatgcttataaacgttatgcttataaaaaaagctccag
cttctggactagaaaattgcagggtaaaaactagccaactttaagcttta
aagaaataatactccttgatgagattaaactttgactcctttataactgc
tttaaactgcatcccattaaacaaaccctccccaatctcttgccgaTTAT
CCCATGAAAaatatataggggaaagattccagaaaagtaagcaagaatct
tagtgcggaaatgggaatctaaTACAGACAATGTACCAtggttcaaaatg
aaaatcctaattagcaaaaggtgtGTCAAGATcagtgaagtttgattgaa
gctcgattagtttgatttattaccttgttgcccattctttttacattccg
aaGGCTTATTAGCaaacgcccacgctaaagcttaaagagtgagccaatat
ctatcatcccatcggggaggaaaagctggaacttttactaaccaaactca
tcgaacaccaatcaaacttcatcggataaaaaactgtcaNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNccaaacgcccacgccataatttgcgccctaaaaaatgtctcgccagc
cagacacacggaaggctatcgtaatactttcgctaagcgaaattaacaaG
CTGAAACttctatagaaaaaaaattacaaatcctCTACCACTTGACAGCC
GTTGTCGGAATTCCTGACAATACTATTTCATAATTAAAAAAcccttgttg
atattttttgatacAGTTTTCCAAAGAGTTCTTGAGAGAAAATTTACTTT
AATTCCCCATCAATTGACAGCGGTTATCGAAATCCTAGCTACGTTATACC
CTGATATTGTCTGGTTTTCAAATGCGAAAggttacgtaattcaaaaacaa
aacgtcagattttaTTCGTTCTTCTATTTTGTAGTCATTGCGCTGCAGCT
GTCAGCCTGGCTTAGGGTGTTCCCTGGCGTCTACCAGTTACGTagataaa
gcctggaatacacggggcgAGGTTGGTGTGACCATCAATGATGTTTTCTA
AGGCTTCCCTAAAATCAGACAAATTTAACGATATAATggacaaaagaaat
taaaaaatatccatcataagctttttttctaagaataaactttataagat
attgtccatgatgaaaatgccCAAAAATTAAGGATATCGTAAGAATATTG
CTATCATGGAATTAGGCAACTGAAGCTAAGATATTTAGATTAGATTAGAT
TATTTTACCTTGCCTTTTACCTGTATATTGCCATTTACTCCCAAGCAATg
ctactctcgggtgcctaataaacgtacagaccaaaatTTAAACGTACAGG
GGGGAgataaaattggaattaatacagtaaacgtacaggctgaaataaag
GAACGGGCGAGAAATCAGAgttaaaataaacgtacagggaaaaatttacc
aatttttcaaaagtagaacaTCCAGGTCAAAAAGACTGACTTAAGTATAG
GTATATCTCTTATCGATCATTGACAagtacttaagggctctgaccatagt
cggaaaattgattttagtatctgaacataaaagttatgtttagatgcttt
aacacttttaacaaagaatcgCTTTTATAAATTGCCtcttaatcaaatcc
cttaagagtaattaagaacttaattgcaaaaatgacgttatgaactttaa
aaagacattAATaatattggtcaaaaagcactattttcaagattttgaag
caaataagcttttagaaaaattttccagaaatttataattttagttcgat
aaaaaatagaccatctaccgcaaaaatcttttcaaaatgttttttcttcg
cccaaactaagctcttcaaagttgaaatactcttcttcgcaaaagcttca
ttttcttcttcattaatttttttcattgcgatttttaaattttcagactc
acgggtagttggcctaacagaaaatgtataatataTCAAAGTTTTGTCCG
CTACATCAGGAAGAAATTCATATTTTGCAAGTGGCAagtattaaaaattc
actatggtcagagcccttaaataatCTTTTATTACTGTAAGTAACGAATG
AATTAATTGAGTCAATACTTTATATCAGTTTTTAGAAGACCACATAATTT
TTTCCAGTATGAATCGGGCGATATTGTGTCAAGATAAATAAACGTACACG
AGGGAATAAACGTACAAGcgggaataaacgtacaggcgggaaaattcttc
aaaagaaataaacgtacaggcccTAATAAGTTGCGTACAGGTGGGAAATT
tgacacgaaaaaaataaacgtttattaggcacccgagagtaagaAGTTCT
AAGAAGTTCCCAAATTCTTCCTTGAGGCATATATTGCATGCTAGATTTAG
GTTATGTTTTCATCTTAATCTAAGAATACTTTAagagtatttcaggatga
tttcgACCAAttagttaagaatatccatgattaATTGAAtatacaccatt
cttataaaaaaaacgtgtgtaCCCCAAGATTAAATGCCACCCTTATACTT
ATACcttatcaaattttaaaaacttttagatttcttAACGTTTTATAGAA
TCTCAAGGGATAGCgatacaaaaatataaatttagaGCAATGAACAACAT
GCGATAGACCATCTAGATTTAAAGTGAAAAACTTATTTTGGAGGATTTAG
AGTACAGATTACagcattacacgtttttttttaagaaactagttttacca
agcagccttaatgtttcttaagaaatcggccttttgacccttaaaaatgt
ttcttacatgtttctaaactttttgacataatcagcctatttttcataca
aagaaaaaaaaacatttgttttgattggaaggttgtTAAAataccgaatt
aaaaaatgttattttctcattctcagcctcagcatgtttcttagatgttt
cttagtttttaggcattctgagcctcatgtttcttaaaagtgtgtttctt
aaaaaaaaacaacgtgtatatCGAATCGTGTCataaatttcctttgttta
ctttcaatACAGGCAGAATAAAACTACAATTTGATACAATATAATTTAAT
GTTCATTTCAAACATTGGGAATAAATTAGTaaactttgttattttttcca
CCAAGTGaaatgatttatatatttacatattatattttacagattttacg
gaatgaaataaaaattgaataatacGGGCGGAGTTTCCGCGGAAAACCAA
AGACACAAAATCATTTCGGGAATTTGGTCCCATTATGCAAAAGCAGCCAG
CGAGACgaccttttttccgatgtgttctgagaccatatttcagctagaaa
ttttgatctgttctgaccagatcttcgaaaattaatcagctacaAATGAT
GATGTGTTCTGGTGAGACAGtggtataatcaaggtcatctaCTGTGtatt
cttgttgtctaggtagccctagaaagcttcagaacataTCTTTTAAGTAG
ACACGTATAATCCCCGTATAATCAAGAGAAATTtatgtaatcttgttgcc
tagtaaattttcagaacacatctttcgtggagcaaaacaaatatcttaca
agtttatcttggcaaactgtttttcctagattttagagcacatcaaacca
taaagtaatgataagtttagggagacaaataggGCGATAAAGGTTTctta
gaaatcagaacacataatttgtatgaaaaatttaatggtcataacatttg
gtctcttaagataagaacacatatttctaaaaaatctcggCTGCTTTTGC
ATTATGTGTTCGTCAAAAAAATGATAGGTTTTCAATCATTCAACGACCGT
TTTCGAAACCCTTAGTACGATATGTTCACAACCTAGTCAAATATTAAATA
TCCCTTCAGCTTTTTTTATATTCCGGTCCGTAAAATAcacacctttaaaa
aaatttatgactGTCAACAACAAGTAAATTCAGAAAGATTCAGACACGTG
CCTCTCCGATTATCATAGTTGACATCCCCAGCTCAGCTAGAGTACAGCGA
AATTGAACCTTTATCGACAAACGAACAAGTGCAAAATTATGGTACGGTAG
AGTCTcgttaactcgaatgtctcgttaactcgaacaaatttactCGTCGC
TTCAATTAACAATTTGCCTTAAATCttattccataactcgaaaattcctt
aactcgaacaaatttgtgttcctcgcGCAGATTCGAGTTCTAGACGCTCG
ACGGTTTAACAAACGAAGTATATTATGGTTTTCTTAGAAAGACGTACAAT
CTTTGACTATCGATAAATAGACAGTGAaagctaaaaaaatttaaaagttt
tccaTACTTGTATGCCAAAATGTTTTTGCTAGATACGAAGGCAATTTGTA
GACGCACACGTAAAGTACCTCTTATAAAGAAGAAAAGGTGGCCCCTAATG
GAGAATGACAAGCAACCCTATAATTTTTTGACGCAAAAATATTCTCCTTT
GAAGTCAGTACTGTCACGCTATCGTGAAAATTCTCTGATCAAAATCTACA
GGAAATTCACGATATTCATATAGCTTATTGTTGCAACACATGGCAAGTTC
CATGGGTTTCCGAGGTAAACTTTGACTCCATAAAATTGTTGTGCTTTTAG
ATTATCAACAGCGTGAACCTTTTCTCCATTTATTTCAATCGAATACTCGT
AAACGCCTCCGTTTTTATATCTTTGGCTGATCTTTATTTGGTACTGGTTA
TTGAACTCGATAGGAAGATCGAATTTATGGTTGAAATCATTTCCTACAGT
GGACGCAATCTGTAGTCTCCCATCAATACTATTATAAAATATTGCCGGTG
TACGCTCGCCATGCAAACCTTGATCATCGCCTTTTGTCATATGGAGTACG
GAACACCAATGCCCTCCTGGTATTCCAGTGTTTACATGATTTGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033636XLOC_033636Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053285-exon-scaffold_228-1491911889:280154..281273TCONS_00053285-exon-scaffold_228-1491911889:280154..281273Clytia hemisphaericaexon
TCONS_00053285-exon-scaffold_228-1510915933:280154..281273TCONS_00053285-exon-scaffold_228-1510915933:280154..281273Clytia hemisphaericaexon
TCONS_00053285-exon-scaffold_228-1575043694:280154..281273TCONS_00053285-exon-scaffold_228-1575043694:280154..281273Clytia hemisphaericaexon
TCONS_00053285-exon-scaffold_228-1491911889:290294..290849TCONS_00053285-exon-scaffold_228-1491911889:290294..290849Clytia hemisphaericaexon
TCONS_00053285-exon-scaffold_228-1510915933:290294..290849TCONS_00053285-exon-scaffold_228-1510915933:290294..290849Clytia hemisphaericaexon
TCONS_00053285-exon-scaffold_228-1575043694:290294..290849TCONS_00053285-exon-scaffold_228-1575043694:290294..290849Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_228supercontigscaffold_228:280154..290849 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.648925	0.63758	0.228469	0.575986	0.278161	0	0.0504953	0.115932	0	0.0569862	0	0	0.787499	0.580208	0.0310459	0.130635	0.214058	0.0301728	0.702009	1.2169	0.546012	0.467774	0.413171	0.200388	0.279004	0.527058	0	0.190293	0	0.0514772
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053285 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top