TCONS_00053458 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053458
Unique NameTCONS_00053458
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2295

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053458 ID=TCONS_00053458|Name=TCONS_00053458|organism=Clytia hemisphaerica|type=transcript|length=2295bp
AATTAAATCCAATATAAAtatgtttgcataaattatgacgtcattggaaA
ACAAAATAAGCACAGTTACAGTGTAGATTATGAGAATATGACCTTAAAAC
CATGTCCAATATTTGTGGACAAAATAATAATCCTTTTCTTACGTCTCTCA
AATCAAATCATTCAAATGAAATGATATCTGACGTGAACGAGAAAGCAACC
AAGTTCATTTCTTATAGTTGGTATAAATTAGTATTTAATTATAACTATGT
AACACCAACGTTAAATAaatcggaaaataaaaaaaaaaaataaaaaaaat
ttcttaaaactTTTGCTAACAACATTATTTTGATTTCAGTTTTTAATTAG
TCTTGACGAAAAATGGTGACATCGCCCTCATTTTTGCTGCTGGTATTTTT
GATATCATTTCTTgGTCATGCTGTCCAAGCCAATATCTCCAACTGTTGCA
GAATCGGCATATCAGATGCCACAAAACAAATTGTGCTGGAGAAAGACCAA
ATCACTTGTTCAATCTCAAATGCAGATAAGTTTGAAGAAATCCAAAATAA
ACTGAACCTTCAACTGAATGGAGCGACACAAAAACTACTTTGTAAAACCA
TCTACAAACAATGTTGTATTTCGTCCGTCAAATCGAACTTCTGCACCACC
GGGATTGAGTTAGGACAGTCGAATGCTATCTGTTCAGGAGGAAAGAATGA
CATTGGAGGGGGAGCAGCAATGGAATGTTGTGATTGTTGTAAGGTCGGTG
AAAAAGCGGCTTCTAAACGAGAAGATTGTGACGCAGTCAAATTTAAGAAT
GATCTGTGTACGCATGCGTACCGTAAATGTTGTAAAGATAAAGAACAAGA
AATGCCAATACAGACGACACAGACACCACAACGTAAGACGTGTAGTGACA
TCGTATGTGACAAAGCTTCAACAGTGTCATGTGGAGAAACCAACGATGGC
CCTGTCTGTCATTGCAAAGACGGTTATTTCGCTGGTCTTGATAAAATCAC
GTGTCATGACATGGATGAATGCTTGGCCAACAAAACAATTTGTTCCGttg
gaaaatgtcaaaacacCATGGGAAGCTACGAATGTGTTTGTGATGTCGGC
TTCGAAATGCAAGACAATAAATGTGTCAAGTCCACAGATAAAGAATGTAG
GAAAGGTTTTGAACTAAAAGATGGTGAATGCGTTGATATCAATGAATGTG
TCACAGGGGCAGAAAATTGCCATTCTGATTTGATGTGTTTGAACGTCAAT
GGAACCTTCCGATGTATCGAACCTCAAAATTGTCATTCCAAATATCAAGC
TATTTATTCAACGATCACAAACAAGAGATATTGTGAAGATATTGACGAGT
GTGCAATTCATGGCAATCAGATCTGTAGAAACCCATTCACTGAATGTATT
AACATCGTTGGTGGTTACCAGTGCAAACAAACTAGATGTCAAGATGGATT
GAAATTACTCAATGGCTATTGTACAGATATCGATGAATGTATTGAGCAAC
CGGGTATTTGTGGTGAGAAAGGACGATGCATCAATCTCTCTGGAAGCTAC
TCATGTATTTGCAATGAAGGCTACAAACCTGACCCTGCTACTAAGAAATG
CATAGACGTTAACGAGTGCAGGCTAAAACTTCATCAATGTAGCTATCAGT
GTATCAACACACCCGGCTCATATTACTGCAAGTGTCCAACTGGTTATGAA
GCAAGATCAACCAAAGCTTGTAATGACATTGACGAGTGTGCGACAGGTGG
ACATGATTGTTCAGGAAGTGAACGTTGTTTCAACACGTATGGTTCGTACC
GTTGTATCGATGAATCGTGCCCTGCTCCTTACTACATCCGAACTGGTCGA
AAtttttgcaaAAAAGCCAAATGCGAGAAAGAAGATTTATATTGCCAACA
CCTCAAGATTCGACAGATCAAATGGCAAACATTTCGATTCAGACAAACTC
TGCCGGTGAACTTCTTCCGATTCAGCTACAGTGTGTCGGGATATCAATCG
CACATTCATTATAACTTTGCTCTGGCTGAAGGAAATGATGAGAATCTGTT
GGCCGTTGAATATTTGGACGAGCGCAAGATAGTCATTTACAACCAGAACG
AAATAAAAGGGCCGAAGGATATTCACTTGAAGCTTTTTGTGGATGTTTTG
GAATACCAACAACTTATTGATCGGTTTGTTTATaaattgaatttgttttt
cTCAGCTTATGATTTGTAAATAGATTTACAGAAACAgaatattttcagaa
aataagCCTTAAATTTGCAGACCAGTAATACGAAATATAATTTTC
Run BLAST on NCBI

transcript from alignment at scaffold_231:234867..242876-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053458 ID=TCONS_00053458|Name=TCONS_00053458|organism=Clytia hemisphaerica|type=transcript|length=8010bp|location=Sequence derived from alignment at scaffold_231:234867..242876- (Clytia hemisphaerica)
AATTAAATCCAATATAAATATGTTTGCATAAATTATGACGTCATTGGAAA ACAAAATAAGCACAGTTACAGTGTAGATTATGAGAATATGACCTTAAAAC CATGTCCAATATTTGTGGACAAAATAATAATCCTTTTCTTACGTCTCTCA AATCAAATCATTCAAATGAAATGATATCTGACGTGAACGAGAAAGCAACC AAGTTCATTTCTTATAGTTGGTATAAATTAGTATTTAATTATAACTATGT AACACCAACGTTAAATAAATCGGAAAATAAAAAAAAAAAATAAAAAAAAT TTCTTAAAACTTTTGCTAACAACATTATTTTGATTTCAGTTTTTAATTAG TCTTGACGAAAAATGGTGACATCGCCCTCATTTTTGCTGCTGGTATTTTT GATATCATTTCTTGGTAAAATTCTTATTTTTATATTCTTGCACTACTTTT ATTCAAACATGGTACTTAGTTCACAAAGGTATCTTGACACTTTATAGTAT TTGAAAATTAAGTTTTGATGCTAAAAATCATATGAAAGTAAAAATGACGA TGTTTCGAGGTCATTTTGACCCATTTGAATGTAACCTAATCTACATTTTT TGTTCATCTTATTGCAATTGCATTTCAGGTCATGCTGTCCAAGCCAATAT CTCCAACTGTTGCAGAATCGGCATATCAGATGCCACAAAACAAATTGTGC TGGAGAAAGACCAAATCACTTGTTCAATCTCAAATGCAGATAAGTTTGAA GAAATCCAAAATAAACTGAACCTTCAACTGAATGGAGCGACACAAAAACT ACTTTGTAAAACCATCTACAAACAATGTTGTATTTCGTCCGTCAAATCGA ACTTCTGCACCACCGGGATTGAGTTAGGACAGTAAGTCAAATTAGGATTT TACTAAAATACTGACAAAGACGACAAGCACATCTTCTTTGTTCACGTTTC ATCTATAAAGCTAAACTGCTGGTTTTCCCTAACATGAAATTTGTTCACGA TAAGTGTGCACCTTTTTACCATTAGGAAACCAGGAATGGAATCGGTTAAT TTACACTGAGATGGTTTCCATAGAGTCAAGTCTTATAGCTTGTGTACCCC CTCCCCTCTTCTTTCTTCCTTGTAACTTGGTGAGATGTTATTTCAGGTCG AATGCTATCTGTTCAGGAGGAAAGAATGACATTGGAGGGGGAGCAGCAAT GGAATGTTGTGATTGTTGTAAGGTCGGTGAAAAAGCGGCTTCTAAACGAG AAGATTGTGACGCAGTCAAATTTAAGAATGATCTGTGTACGCATGCGTAC CGTAAATGTTGTAAAGATAAAGAACAAGAAATGCCAATACGTAAGTAAAT GCTTACATTTTTCTAGAATTCTTTAATTCGAACAAATGTAACGAGAGCTC AAATTAACGATTGTGTATTATATTGTGTAACGATTTTGCAGATTTTTTTT CGAAATTCGAAATGAGTGTTTGACCAAATATAAGGCTTCAATGGTTAAAG AGATTACAACTCCGATATTTAAGTTACTCTTATACAATTCCTGTGGCTAC TTTGATCCTTCGCCTGAGATTGTAGAATTTCGTTCTTACTTGAAATTATA AAACTTATTTTAATTTGGATTGCTTAGAAAGCTTGAAAAATGTACTATAA TACTATGCCAAGGTACCAAAAAACTGCAAACAAAAGCAATACTAGATAAA TGCCTACCAATCCCAATGAATGGATGTCTCATCCTATTATTCAGGGCCAA GAAATTTCAAAATAATGTCAGAAAACTCTTTCATTTTCCAGAGACGACAC AGACACCACAACGTAAGACGTGTAGTGACATCGTATGTGACAAAGCTTCA ACAGTGTCATGTGGAGAAACCAACGATGGCCCTGTCTGTCATTGCAAAGA CGGTTATTTCGCTGGTCTTGATAAAATCACGTGTCATGGTGAGGATGATT TATAATGACGTAATTTTTTCTGTAACAACAAACAATAGCCCATTAATTGT TTTGGCCTAAATTCCTGACATCATTATCCTTAATTTTCCTGACCTACCAA AATGCAATCCTTGACTCAAAAAGTTAATATCTAAAATTTCCCATTCATCC TCAGACATGGATGAATGCTTGGCCAACAAAACAATTTGTTCCGTTGGAAA ATGTCAAAACACCATGGGAAGCTACGAATGTGTTTGTGATGTCGGCTTCG AAATGCAAGACAATAAATGTGTCAAGTCCACAGATAAAGAATGTAGGAAA GGTTTTGAACTAAAAGATGGTGAATGCGTTGGTAAGATTTCGTTCGTTGT TATTGCCCTATTATTAAAAAACTGTGTAAGTGCGAGTCCCAAAGGAGTAA ATAGCAATGCCTCATCGAGAGTTCTCCGGATTTGTTAGAGATTTGTCGAT GCCGTTAAAATTTGATCAATGTTAAATGTTGAATGTATTTTTGGCATTTT CAAATTTGTTGGTAGTTTTAGGAAAAAGTCAAACGAGTAAAACTTTTGGA AATCTGCAGATTGAGATAAAAGCTAATTAATAAGAATTAGTTCAATCAAT TCATAATCATGGTAAAAACTTTTTTATCTCCCTTTTTATTTCGCAGATAT CAATGAATGTGTCACAGGGGCAGAAAATTGCCATTCTGATTTGATGTGTT TGAACGTCAATGGAACCTTCCGATGTATCGAACCTCAAAATTGTCATTCC AAATATCAAGCTATTTATTCAACGATCACAAACAAGAGATATTGTGAAGG TGAGAGACATTTACTACTCTGCCTCTCGTATAACATCACCCTGTTTTACA AGCCATCGCATCACTGTCTCACAAGATATCACTTAAGCCCTTGCGTCTTA AGGCATCATTTACACCCCTGCCACACTAATGAGGGGAAACGGTGTTGCTG TTGTTTTGAAAAATCCGTACCAAGAAATCTTTTATAAGCTTTTTGAGAAT ATTACATACAGTGATAATTGCTGGAAATGCTCAACGTGTTTGTATTTCAA TACTTCTTTAATTTAACCAGATATTGACGAGTGTGCAATTCATGGCAATC AGATCTGTAGAAACCCATTCACTGAATGTATTAACATCGTTGGTGGTTAC CAGTGCAAACAAACTAGATGTCAAGATGGATTGAAATTACTCAATGGCTA TTGTACAGGTAAGCCTCATGAACTGAGAACTTTATTTTCCGAAGGCGAAT TTTGCATTCAAAGTCACTGCTCAAAGATTGGAACTTGATATTCGGAAATA TCATCCAAATGTTACAAGACTAACTTTCGACCGTAGTAGGGTGTTTAGAA GGTACAAATGAAACAAATGGCTCTTGCCGATGTCTATCCTATTTGATGTT TGAGAAAACGAAAAATCTAATTAATTTTTCCGTAGAAAATACCTTGATTG TTGACCACCTCAGTAAACTGATATTACTTATTCTCACAGATATCGATGAA TGTATTGAGCAACCGGGTATTTGTGGTGAGAAAGGACGATGCATCAATCT CTCTGGAAGCTACTCATGTATTTGCAATGAAGGCTACAAACCTGACCCTG CTACTAAGAAATGCATAGGTGAGTATCTACGTCCTCTACTATACGGAACA GATGCGATTACCAATTTCTGCTTTTTATGTGAAGTTGAGTGTGCGGATAG GGTATCTCTGCTAAAAAAAGGTTGTGCAAGGGCAATTAAATTAAACCCAT AATGGTAACATAATGTTTAGGGTATAGAACTGTTTCGGATCAGGAGGTTT TACTATTTCCTCTCTGACGTAACATTTTCTTATCTATTAGTTAAAACTAT GTTAGTAGGGGCGCAAGCCTGGGGTCCCGGGACATCTTTTTTACGACCTA ACCATTTTTAGTTTCTTCCAAAGAACAGTATATTACAAGATATTTTTGAG AGGGAGGACGCGGAGTAGGCCCGGGAAAAAACTTTATATATGAGAAATAG CAATCAGGAAAGTAGCCTAAAAACTATACTCTTTTCTCTCTCATCTGATT TCAATAAAAATTCATTTTACAGACGTTAACGAGTGCAGGCTAAAACTTCA TCAATGTAGCTATCAGTGTATCAACACACCCGGCTCATATTACTGCAAGT GTCCAACTGGTTATGAAGCAAGATCAACCAAAGCTTGTAATGGTGAGATT TTTAATATGTTTTCTAAAGCTACTGGAGAGCTGAGAGAATACGTCATATC GTCCTTCGTTCCGAGCGTAAAACTCCTACTATTCGGGATATGCGCACTGC TCTTTTTTTGAATATTGAATTAACACTTTATCCAATCAGAGAGTTTGTTT ACTTGAAATTTTTCGTGCCGCTTACACGGAATCAAAGCACGAAAGATGAA TTCGAAACCCATGTATTGAACAAAGGAGATTCTCGTGGGATATAAGAATG GGAATGACCATCGGTACTAAAATACCATTCATTCTCATGAAATATATCAG AGAACTTTCCTTTTACCTTTAACATAACAATTTTGTTTCCCAATACTGAA TCTTAGATCCGGATAGAAACTTACACATATTACTTCCCTTCTTATAGACA TTGACGAGTGTGCGACAGGTGGACATGATTGTTCAGGAAGTGAACGTTGT TTCAACACGTATGGTTCGTACCGTTGTATCGATGAATCGTGCCCTGCTCC TTACTACATCCGAACTGGTCGAAAGTAAGTCCCTTTTTGAAATTAAAATA ATTATTAGGAATAGTTCGTTCTGTGGTCTACACCCTGGCAAGCAATCTTC CAATAACTATTGAACTTTTTGCTGTTGGGCAAAACCTTGACTGGCATTTC CATAGTCTATAGTCTAAAGTATCCAAAATCAATATGGAACTATTGGTTTT GGTAAGGGTTAACTCCGTTATATTTGTATTTACAATCCCCGTAGCTTATC TCGACACAGACAAACATTAAAACAAAAAGCACACCACAATTTCACAAACT CTTTCTCACGATAAACGCAATTTGCTTTTGTAAGATAAGTATAGAATCAA GAAAAGATATATGATGTTGAACAAAATTCCACTAACCTCCAATCCGAGGT TTTAGTCAGCTTACATCTTCACTCACTTTCCCACAAACTCACCAACAAAC ACACCAGTCACTTAACATTATTCCTTTCCAGGGATCGACCGCAAGGCTGC CAAAAACATTGTTATCACATCAAAAGCCTCAAAACAAGAAAACTCTGTCA AAATAAGAAATCCTTTATCGCTATTCGCAGAAGACTCTTTGAATTCCAAA AACAAATCTCGGTTTTTACTGAAACCGTTAACGGGACAAGAATCCGGAAA TCCGAATTTCGATTCCGATATTGGTGGACTTATTCGAATAAACATCACCA TGTTAAAGTCCAAATTGTGAAAGGTTAGTGAAAGTTTTTTTCTCTACAAA ACTACGACAATCAGTTTTGAAGGAAGGGTGGTCAATAGATAGATATTTCC AGAGGAATCAGAAATCTTTAACGTACGACCTGTGAAAACTGGAGAAAAAT ATTTATGGATACAAAACAAGGGCGGGTGTATTATTTTAAGGTATCCTATT TGGTTAAAGTTGTTCATACAAACCGATAGATTTCAATGCATCTTGTATTC TTTTGCTTAGACCTTTATAGGCCTTACAGTATCTCATTTTGACCTAGTAG TTGTTTTAAAAAATTAGAAGCCTAAGTAAGACTTTGCAGCATTTAAATCA CACAACAGACTGACTAAATCTCATCCCTTATACCTCACAGGTAACGAAGA CGGTTACTTCGCGATCGAACGCAAAGAGGGAGCTCATGAAATCTTCCTCT TTAATAAATACGACATCAAAGGATATAACCAATTCCATCTAGTGATGGAA ACTGAAGTTACCCAACAAACTATTTCATCAACAGCTTCGTGGCGTTATCA ATATCATTTCTACATCTCTGTATCCAACCATCAGTTCATTCGGCCACCAA CGACCAAGGTTTAACATAAAGAAGAAAAGTCGACGATGTAATATGATGGT CTGCGTTGATGAATTGAAATAGTCGCTGCAATCTTTTAGTTTTTATATGC TCCCACCCCAAATATTCGTCAATTTATTTTGTAATTTAGATTTTATAAAC CATGCTAATACACTAATGCACTGTAAATACAATGATGATACCAGATGTCA AAACGAAATTTCTGTTAATAGTTTTTCCAATTCACTTTTTTTCAAACCAA CTCCTGACTAATAAATTGTACATCGTCATCGATAAGAAAACTAACATTTT TGTCGCACTTTCATCCAATCATATTTTGCAGCGTATGCCGGAAAGTCAAT TGTTACGGAAACCCAAAATGCCGGACACTCCCAACACAGAGCATCAAATG GTCACACTACAAATTTTATCGTGATTTCCAACGACATGGTTTTGTTTTCA CTTACTCCTTGTCAGGATTTGGCCCCTCGTGGAATCTGAATTTCGAGTTT GCTTCAGGTAAAAAACACTTCTCTTTGAGAGTTCCTTTGTGGACTATAAC ACATCAATCTTGCTGATTTTTCTTACGAAAGAACTTTTCTCTTGACGAGG ATGGACTTATTTTCAGTCTGAATCACAAAACACTATTAGTCGAATGTATG TGCTTTACATACAACCACAAATGCATTGTTTCTTTACCAGGATCCCTGCC CCTTTTGTGACTATCAACACTTCATGAACTTTTATTTATCATCCACCTGC TCTCTTCTGCAGGCAACACGGACGGTGCTTTCGAAATCTTACAAACTGAT ACTCGAGGACGCGTCAAGGTCCGCAACAGTAAGGACATCAAAGGACCGAA AGATTACGAATTGGTTTTCCGAGCTGATGCTTCAGATGCAGTGCACGGTC ATCATCAACGATTTGTTTACAAAATCTTCATCAGCGTTTCACAATATCCT TTTTGATTTGATGTTTTGTAAACTTTGTATTTAATGACTTTAATAAGCTA CTTGTATTGTACCTTACAATTTATTATCCATGAAATATATTTTGCTGAAC TTTGTCGTAACTTCTGTTTGATTTCAGTAATGTAAAAAGAACGTGCATAA TGTGAAAATCTCTATTCTTGATGTTCTATTTCAATATGGTGACAAAGCTT TCTAGAAAACTTTCGAAAATTGAAACTCAAACAATTCATGCAAACAACTT TTGTCTCAAAAGGGATCATTTTTTATCTTTTTTTGCTGCCGGACCAGATT TACTAATTCTGAATTTCGTCGTATTTTTTTTAGTTTTTGCAAAAAAGCCA AATGCGAGAAAGAAGATTTATATTGCCAACACCTCAAGATTCGACAGATC AAATGGCAAACATTTCGATTCAGACAAACTCTGCCGGTGAACTTCTTCCG ATTCAGCTACAGTGTGTCGGGATATCAATCGCACATTCATTATAACTTTG CTCTGGCTGAAGGTGAGCTGTTGTAAATATATTGTTCAGAGACTGATTTG GACTTTTGCCAGTCCCAGGGTTTATACCTGGAGTGCGAGTTGAGTTAAGT CACATTTTTGGTATTCCTCTTATGGAAAAAGTTAGCTATAAAAACACGAG CGAGCATCGAAACTTTTGAATAGTAATTTTCTCTTTGTAATTAGACTTAT TGCTCGATCTTTTTCAGGTATGAAAAGATAAGCGGACGAGTGGCCTTTCG CGCCCCTCCCCAAAAAATATTGGAAAGAAAGGCCACTGTCCAAATGCTCA AAATATCTTTAAAAATATGTTATAAGATATCTAATTACTTTCCCAGGAAA TGATGAGAATCTGTTGGCCGTTGAATATTTGGACGAGCGCAAGATAGTCA TTTACAACCAGAACGAAATAAAAGGGCCGAAGGATATTCACTTGAAGCTT TTTGTGGATGTTTTGGAATACCAACAACTTATTGATCGGTTTGTTTATAA ATTGAATTTGTTTTTCTCAGCTTATGATTTGTAAATAGATTTACAGAAAC AGAATATTTTCAGAAAATAAGCCTTAAATTTGCAGACCAGTAATACGAAA TATAATTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033750XLOC_033750Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053458-exon-scaffold_231-1575043694:242463..242876TCONS_00053458-exon-scaffold_231-1575043694:242463..242876Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1575043694:241996..242248TCONS_00053458-exon-scaffold_231-1575043694:241996..242248Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1575043694:241537..241730TCONS_00053458-exon-scaffold_231-1575043694:241537..241730Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1575043694:240939..241085TCONS_00053458-exon-scaffold_231-1575043694:240939..241085Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1575043694:240596..240772TCONS_00053458-exon-scaffold_231-1575043694:240596..240772Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1575043694:240128..240280TCONS_00053458-exon-scaffold_231-1575043694:240128..240280Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1575043694:239719..239856TCONS_00053458-exon-scaffold_231-1575043694:239719..239856Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1575043694:239309..239437TCONS_00053458-exon-scaffold_231-1575043694:239309..239437Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1575043694:238735..238854TCONS_00053458-exon-scaffold_231-1575043694:238735..238854Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1575043694:238203..238329TCONS_00053458-exon-scaffold_231-1575043694:238203..238329Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1575043694:235465..235643TCONS_00053458-exon-scaffold_231-1575043694:235465..235643Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1575043694:234867..235130TCONS_00053458-exon-scaffold_231-1575043694:234867..235130Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1510915933:242463..242876TCONS_00053458-exon-scaffold_231-1510915933:242463..242876Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1510915933:241996..242248TCONS_00053458-exon-scaffold_231-1510915933:241996..242248Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1510915933:241537..241730TCONS_00053458-exon-scaffold_231-1510915933:241537..241730Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1510915933:240939..241085TCONS_00053458-exon-scaffold_231-1510915933:240939..241085Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1510915933:240596..240772TCONS_00053458-exon-scaffold_231-1510915933:240596..240772Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1510915933:240128..240280TCONS_00053458-exon-scaffold_231-1510915933:240128..240280Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1510915933:239719..239856TCONS_00053458-exon-scaffold_231-1510915933:239719..239856Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1510915933:239309..239437TCONS_00053458-exon-scaffold_231-1510915933:239309..239437Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1510915933:238735..238854TCONS_00053458-exon-scaffold_231-1510915933:238735..238854Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1510915933:238203..238329TCONS_00053458-exon-scaffold_231-1510915933:238203..238329Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1510915933:235465..235643TCONS_00053458-exon-scaffold_231-1510915933:235465..235643Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1510915933:234867..235130TCONS_00053458-exon-scaffold_231-1510915933:234867..235130Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1491911889:242463..242876TCONS_00053458-exon-scaffold_231-1491911889:242463..242876Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1491911889:241996..242248TCONS_00053458-exon-scaffold_231-1491911889:241996..242248Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1491911889:241537..241730TCONS_00053458-exon-scaffold_231-1491911889:241537..241730Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1491911889:240939..241085TCONS_00053458-exon-scaffold_231-1491911889:240939..241085Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1491911889:240596..240772TCONS_00053458-exon-scaffold_231-1491911889:240596..240772Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1491911889:240128..240280TCONS_00053458-exon-scaffold_231-1491911889:240128..240280Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1491911889:239719..239856TCONS_00053458-exon-scaffold_231-1491911889:239719..239856Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1491911889:239309..239437TCONS_00053458-exon-scaffold_231-1491911889:239309..239437Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1491911889:238735..238854TCONS_00053458-exon-scaffold_231-1491911889:238735..238854Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1491911889:238203..238329TCONS_00053458-exon-scaffold_231-1491911889:238203..238329Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1491911889:235465..235643TCONS_00053458-exon-scaffold_231-1491911889:235465..235643Clytia hemisphaericaexon
TCONS_00053458-exon-scaffold_231-1491911889:234867..235130TCONS_00053458-exon-scaffold_231-1491911889:234867..235130Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_231supercontigscaffold_231:234867..242876 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0475454 0.0865932 0.0323349 0.270419 0 0.0566065 0.197705 0.159091 0.211816 0.0648342 0.22708 0.163614 0.207029 0.398019 0.14317 0.105191 12.7039 2.84728 0.328808 0.660826 25.8999 28.044 3.91014 3.8177 4.8454 2.85427 0.104182 0.373771 0.0490093 0.0387588
Blast
BLAST of TCONS_00053458 vs. Swiss-Prot (Human)
Match: FBLN2 (Fibulin-2 OS=Homo sapiens GN=FBLN2 PE=1 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 2.474e-49
Identity = 148/525 (28.19%), Postives = 234/525 (44.57%), Query Frame = 3
Query:  876 PQRKTCSDIVCDKASTVSCGETNDGPVCHCKDGYFAGLDKITCHDMDECLANKTICSVGK-CQNTMGSYEC----VCDVGFEMQD------NKCVKSTD--------------------KECRKGF-ELKDGECVDINECVTGAENCHSDLMCLNVNGTF---------------------------------RCIEPQNCHSKY-------QAIYSTITNKRYCEDIDECAIHGNQICRNPFTECINIVGGYQCKQTRCQDGLKLL--NGYCTDIDECIEQPGICGEKGRCINLSGSYSCICNEGYKPDPATKKCIDVNECRLKLH-QCSYQCINTPGSYYCKCP-TGYEARST-KACNDIDECATGGHDCSGSERCFNTYGSYRCIDESCPAPYYIRTGRNFCKKAKCEKEDLYCQHLKIRQIKWQ-TFRFRQTLPVNFFRFSYSVSGYQSHIHYNFALAEGNDENLLAVEYLDERKIVIYNQNEIKGPKDIHLKLFVDVLEYQQLIDRFVYKLNLFFSAYDL 2216
            PQ  TC D   +      C       +C C  GY    D ++C D++EC+ +   CS G+ C NT+GS+ C     C+ G+ ++D      ++C   T                     + C  GF +  +G CVDINEC + +E C     C+N  G++                                 RC E Q CH+         +A +      R C D++EC     ++C++    C N +G Y+C    C  G  L      C D++EC  Q   C ++  C N+ GSY C C +GY+       C D++EC       C+++C+N PGSY C CP  GY   +  ++C D+DECA G H+CS +E C N  GS+RC+   CP P Y++  +  C++  C  + L CQ+   R   +Q  F+    +P + FR   + +     I  N  + +GN+E       L+    V+Y Q  +  P+D  L + +  L  Q  +  F+ K+++FF+ + L
Sbjct:  678 PQPNTCKD---NGPCKQVCSTVGGSAICSCFPGYAIMADGVSCEDINECVTDLHTCSRGEHCVNTLGSFHCYKALTCEPGYALKDGECEDVDECAMGTHTCQPGFLCQNTKGSFYCQARQRCMDGFLQDPEGNCVDINECTSLSEPCRPGFSCINTVGSYTCQRNPLICARGYHASDDGTKCVDVNECETGVHRCGEGQVCHNLPGSYRCDCKAGFQRDAFGRGCIDVNECWASPGRLCQH---TCENTLGSYRCS---CASGFLLAADGKRCEDVNECEAQ--RCSQE--CANIYGSYQCYCRQGYQLAEDGHTCTDIDECAQGAGILCTFRCLNVPGSYQCACPEQGYTMTANGRSCKDVDECALGTHNCSEAETCHNIQGSFRCLRFECP-PNYVQVSKTKCERTTCH-DFLECQNSPARITHYQLNFQTGLLVPAHIFRIGPAPAFTGDTIALN--IIKGNEEGYFGTRRLNAYTGVVYLQRAVLEPRDFALDVEMK-LWRQGSVTTFLAKMHIFFTTFAL 1184          

HSP 2 Score: 134.806 bits (338), Expect = 3.214e-32
Identity = 120/442 (27.15%), Postives = 182/442 (41.18%), Query Frame = 3
Query:  573 ATQKLLCKTIYKQCCISSVKSNFCTTGIELGQSNAICSGGKNDI-GGGAAMECCDCCKVGEKAASKREDCDAVKFKNDLCTHAYRKCCKDKEQEM------PIQTTQTPQRKTCSDIVCDKASTVSCGETNDGPVCHCKDGYFAGLDKITCHDMDECLANKTICSVGKCQNTMGSYECVCDVGFEMQDNKCVKSTDKECRKGFELKDGECVDINECVTGAENCHSDLMCLNVNGTFRCIEPQNCHSKYQAI-----------YSTITNKRYCEDIDECAIHGNQICRNPFTECINIVGGYQC-KQTRCQDGLKLLNGYCTDIDECIEQPGICGEKGRCINLSGSYSC----ICNEGYKPDPATKKCIDVNECRLKLHQC--SYQCINTPGSYYCK-----CPTGYEARSTKA-CNDIDECATGGHDCSGSERCFNTYGSYRC 1805
             T+  +C+T  + CC+S ++   C  G+   +    C    ND  G     +CCDCC +G +  ++ + C++       C H    CC+ +E  +      P +    P+R + +++   +A  +S G   + P            + +   D DECL          C NT+GSY C C  GF +QD+       + CR        E        +      S+ + L +     C +   C      +           Y+ + +   CEDI+EC    +   R     C+N +G + C K   C+ G  L +G C D+DEC      C     C N  GS+ C     C +G+  DP    C+D+NEC      C   + CINT GSY C+     C  GY A      C D++EC TG H C   + C N  GSYRC
Sbjct:  466 GTEDNVCRTAQRHCCVSYLQEKSCMAGVLGAKEGETCGAEDNDSCGISLYKQCCDCCGLGLRVRAEGQSCESNPNLGYPCNHVMLSCCEGEEPLIVPEVRRPPEPAAAPRRVSEAEMAGREA--LSLGTEAELP------------NSLPGDDQDECLLLPGELCQHLCINTVGSYHCACFPGFSLQDD------GRTCRPEGHPPQPEAPQEPALKSEFSQVASNTIPLPLPQPNTCKDNGPCKQVCSTVGGSAICSCFPGYAIMADGVSCEDINECVTDLHTCSRG--EHCVNTLGSFHCYKALTCEPGYALKDGECEDVDECAMGTHTCQPGFLCQNTKGSFYCQARQRCMDGFLQDP-EGNCVDINECTSLSEPCRPGFSCINTVGSYTCQRNPLICARGYHASDDGTKCVDVNECETGVHRCGEGQVCHNLPGSYRC 884          
The following BLAST results are available for this feature:
BLAST of TCONS_00053458 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBLN22.474e-4928.19Fibulin-2 OS=Homo sapiens GN=FBLN2 PE=1 SV=2[more]
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