TCONS_00053459 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053459
Unique NameTCONS_00053459
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2074

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053459 ID=TCONS_00053459|Name=TCONS_00053459|organism=Clytia hemisphaerica|type=transcript|length=2074bp
TAGATTATGAGAATATGACCTTAAAACCATGTCCAATATTTGTGGACAAA
ATAATAATCCTTTTCTTACGTCTCTCAAATCAAATCATTCAAATGAAATG
ATATCTGACGTGAACGAGAAAGCAACCAAGTTCATTTCTTATAGTTGGTA
TAAATTAGTATTTAATTATAACTATGTAACACCAACGTTAAATAaatcgg
aaaataaaaaaaaaaaataaaaaaaatttcttaaaactTTTGCTAACAAC
ATTATTTTGATTTCAGTTTTTAATTAGTCTTGACGAAAAATGGTGACATC
GCCCTCATTTTTGCTGCTGGTATTTTTGATATCATTTCTTgGTCATGCTG
TCCAAGCCAATATCTCCAACTGTTGCAGAATCGGCATATCAGATGCCACA
AAACAAATTGTGCTGGAGAAAGACCAAATCACTTGTTCAATCTCAAATGC
AGATAAGTTTGAAGAAATCCAAAATAAACTGAACCTTCAACTGAATGGAG
CGACACAAAAACTACTTTGTAAAACCATCTACAAACAATGTTGTATTTCG
TCCGTCAAATCGAACTTCTGCACCACCGGGATTGAGTTAGGACAGTCGAA
TGCTATCTGTTCAGGAGGAAAGAATGACATTGGAGGGGGAGCAGCAATGG
AATGTTGTGATTGTTGTAAGGTCGGTGAAAAAGCGGCTTCTAAACGAGAA
GATTGTGACGCAGTCAAATTTAAGAATGATCTGTGTACGCATGCGTACCG
TAAATGTTGTAAAGATAAAGAACAAGAAATGCCAATACAGACGACACAGA
CACCACAACGTAAGACGTGTAGTGACATCGTATGTGACAAAGCTTCAACA
GTGTCATGTGGAGAAACCAACGATGGCCCTGTCTGTCATTGCAAAGACGG
TTATTTCGCTGGTCTTGATAAAATCACGTGTCATGACATGGATGAATGCT
TGGCCAACAAAACAATTTGTTCCGttggaaaatgtcaaaacacCATGGGA
AGCTACGAATGTGTTTGTGATGTCGGCTTCGAAATGCAAGACAATAAATG
TGTCAAGTCCACAGATAAAGAATGTAGGAAAGGTTTTGAACTAAAAGATG
GTGAATGCGTTGATATCAATGAATGTGTCACAGGGGCAGAAAATTGCCAT
TCTGATTTGATGTGTTTGAACGTCAATGGAACCTTCCGATGTATCGAACC
TCAAAATTGTCATTCCAAATATCAAGCTATTTATTCAACGATCACAAACA
AGAGATATTGTGAAGATATTGACGAGTGTGCAATTCATGGCAATCAGATC
TGTAGAAACCCATTCACTGAATGTATTAACATCGTTGGTGGTTACCAGTG
CAAACAAACTAGATGTCAAGATGGATTGAAATTACTCAATGGCTATTGTA
CAGATATCGATGAATGTATTGAGCAACCGGGTATTTGTGGTGAGAAAGGA
CGATGCATCAATCTCTCTGGAAGCTACTCATGTATTTGCAATGAAGGCTA
CAAACCTGACCCTGCTACTAAGAAATGCATAGACGTTAACGAGTGCAGGC
TAAAACTTCATCAATGTAGCTATCAGTGTATCAACACACCCGGCTCATAT
TACTGCAAGTGTCCAACTGGTTATGAAGCAAGATCAACCAAAGCTTGTAA
TGACATTGACGAGTGTGCGACAGGTGGACATGATTGTTCAGGAAGTGAAC
GTTGTTTCAACACGTATGGTTCGTACCGTTGTATCGATGAATCGTGCCCT
GCTCCTTACTACATCCGAACTGGTCGAAAGCAACACGGACGGTGCTTTCG
AAATCTTACAAACTGATACTCGAGGACGCGTCAAGGTCCGCAACAGTAAG
GACATCAAAGGACCGAAAGATTACGAATTGGTTTTCCGAGCTGATGCTTC
AGATGCAGTGCACGGTCATCATCAACGATTTGTTTACAAAATCTTCATCA
GCGTTTCACAATATcctttttgatttgatgttttgtaaACTTTGTATTTA
ATGACTTTAATAAGCTACTTGTATTGTACCTTACAATTTATTATCCATGA
AATATATTTTGCTGAACTTTGTCG
Run BLAST on NCBI

transcript from alignment at scaffold_231:235870..242803-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053459 ID=TCONS_00053459|Name=TCONS_00053459|organism=Clytia hemisphaerica|type=transcript|length=6934bp|location=Sequence derived from alignment at scaffold_231:235870..242803- (Clytia hemisphaerica)
TAGATTATGAGAATATGACCTTAAAACCATGTCCAATATTTGTGGACAAA
ATAATAATCCTTTTCTTACGTCTCTCAAATCAAATCATTCAAATGAAATG
ATATCTGACGTGAACGAGAAAGCAACCAAGTTCATTTCTTATAGTTGGTA
TAAATTAGTATTTAATTATAACTATGTAACACCAACGTTAAATAAATCGG
AAAATAAAAAAAAAAAATAAAAAAAATTTCTTAAAACTTTTGCTAACAAC
ATTATTTTGATTTCAGTTTTTAATTAGTCTTGACGAAAAATGGTGACATC
GCCCTCATTTTTGCTGCTGGTATTTTTGATATCATTTCTTGGTAAAATTC
TTATTTTTATATTCTTGCACTACTTTTATTCAAACATGGTACTTAGTTCA
CAAAGGTATCTTGACACTTTATAGTATTTGAAAATTAAGTTTTGATGCTA
AAAATCATATGAAAGTAAAAATGACGATGTTTCGAGGTCATTTTGACCCA
TTTGAATGTAACCTAATCTACATTTTTTGTTCATCTTATTGCAATTGCAT
TTCAGGTCATGCTGTCCAAGCCAATATCTCCAACTGTTGCAGAATCGGCA
TATCAGATGCCACAAAACAAATTGTGCTGGAGAAAGACCAAATCACTTGT
TCAATCTCAAATGCAGATAAGTTTGAAGAAATCCAAAATAAACTGAACCT
TCAACTGAATGGAGCGACACAAAAACTACTTTGTAAAACCATCTACAAAC
AATGTTGTATTTCGTCCGTCAAATCGAACTTCTGCACCACCGGGATTGAG
TTAGGACAGTAAGTCAAATTAGGATTTTACTAAAATACTGACAAAGACGA
CAAGCACATCTTCTTTGTTCACGTTTCATCTATAAAGCTAAACTGCTGGT
TTTCCCTAACATGAAATTTGTTCACGATAAGTGTGCACCTTTTTACCATT
AGGAAACCAGGAATGGAATCGGTTAATTTACACTGAGATGGTTTCCATAG
AGTCAAGTCTTATAGCTTGTGTACCCCCTCCCCTCTTCTTTCTTCCTTGT
AACTTGGTGAGATGTTATTTCAGGTCGAATGCTATCTGTTCAGGAGGAAA
GAATGACATTGGAGGGGGAGCAGCAATGGAATGTTGTGATTGTTGTAAGG
TCGGTGAAAAAGCGGCTTCTAAACGAGAAGATTGTGACGCAGTCAAATTT
AAGAATGATCTGTGTACGCATGCGTACCGTAAATGTTGTAAAGATAAAGA
ACAAGAAATGCCAATACGTAAGTAAATGCTTACATTTTTCTAGAATTCTT
TAATTCGAACAAATGTAACGAGAGCTCAAATTAACGATTGTGTATTATAT
TGTGTAACGATTTTGCAGATTTTTTTTCGAAATTCGAAATGAGTGTTTGA
CCAAATATAAGGCTTCAATGGTTAAAGAGATTACAACTCCGATATTTAAG
TTACTCTTATACAATTCCTGTGGCTACTTTGATCCTTCGCCTGAGATTGT
AGAATTTCGTTCTTACTTGAAATTATAAAACTTATTTTAATTTGGATTGC
TTAGAAAGCTTGAAAAATGTACTATAATACTATGCCAAGGTACCAAAAAA
CTGCAAACAAAAGCAATACTAGATAAATGCCTACCAATCCCAATGAATGG
ATGTCTCATCCTATTATTCAGGGCCAAGAAATTTCAAAATAATGTCAGAA
AACTCTTTCATTTTCCAGAGACGACACAGACACCACAACGTAAGACGTGT
AGTGACATCGTATGTGACAAAGCTTCAACAGTGTCATGTGGAGAAACCAA
CGATGGCCCTGTCTGTCATTGCAAAGACGGTTATTTCGCTGGTCTTGATA
AAATCACGTGTCATGGTGAGGATGATTTATAATGACGTAATTTTTTCTGT
AACAACAAACAATAGCCCATTAATTGTTTTGGCCTAAATTCCTGACATCA
TTATCCTTAATTTTCCTGACCTACCAAAATGCAATCCTTGACTCAAAAAG
TTAATATCTAAAATTTCCCATTCATCCTCAGACATGGATGAATGCTTGGC
CAACAAAACAATTTGTTCCGTTGGAAAATGTCAAAACACCATGGGAAGCT
ACGAATGTGTTTGTGATGTCGGCTTCGAAATGCAAGACAATAAATGTGTC
AAGTCCACAGATAAAGAATGTAGGAAAGGTTTTGAACTAAAAGATGGTGA
ATGCGTTGGTAAGATTTCGTTCGTTGTTATTGCCCTATTATTAAAAAACT
GTGTAAGTGCGAGTCCCAAAGGAGTAAATAGCAATGCCTCATCGAGAGTT
CTCCGGATTTGTTAGAGATTTGTCGATGCCGTTAAAATTTGATCAATGTT
AAATGTTGAATGTATTTTTGGCATTTTCAAATTTGTTGGTAGTTTTAGGA
AAAAGTCAAACGAGTAAAACTTTTGGAAATCTGCAGATTGAGATAAAAGC
TAATTAATAAGAATTAGTTCAATCAATTCATAATCATGGTAAAAACTTTT
TTATCTCCCTTTTTATTTCGCAGATATCAATGAATGTGTCACAGGGGCAG
AAAATTGCCATTCTGATTTGATGTGTTTGAACGTCAATGGAACCTTCCGA
TGTATCGAACCTCAAAATTGTCATTCCAAATATCAAGCTATTTATTCAAC
GATCACAAACAAGAGATATTGTGAAGGTGAGAGACATTTACTACTCTGCC
TCTCGTATAACATCACCCTGTTTTACAAGCCATCGCATCACTGTCTCACA
AGATATCACTTAAGCCCTTGCGTCTTAAGGCATCATTTACACCCCTGCCA
CACTAATGAGGGGAAACGGTGTTGCTGTTGTTTTGAAAAATCCGTACCAA
GAAATCTTTTATAAGCTTTTTGAGAATATTACATACAGTGATAATTGCTG
GAAATGCTCAACGTGTTTGTATTTCAATACTTCTTTAATTTAACCAGATA
TTGACGAGTGTGCAATTCATGGCAATCAGATCTGTAGAAACCCATTCACT
GAATGTATTAACATCGTTGGTGGTTACCAGTGCAAACAAACTAGATGTCA
AGATGGATTGAAATTACTCAATGGCTATTGTACAGGTAAGCCTCATGAAC
TGAGAACTTTATTTTCCGAAGGCGAATTTTGCATTCAAAGTCACTGCTCA
AAGATTGGAACTTGATATTCGGAAATATCATCCAAATGTTACAAGACTAA
CTTTCGACCGTAGTAGGGTGTTTAGAAGGTACAAATGAAACAAATGGCTC
TTGCCGATGTCTATCCTATTTGATGTTTGAGAAAACGAAAAATCTAATTA
ATTTTTCCGTAGAAAATACCTTGATTGTTGACCACCTCAGTAAACTGATA
TTACTTATTCTCACAGATATCGATGAATGTATTGAGCAACCGGGTATTTG
TGGTGAGAAAGGACGATGCATCAATCTCTCTGGAAGCTACTCATGTATTT
GCAATGAAGGCTACAAACCTGACCCTGCTACTAAGAAATGCATAGGTGAG
TATCTACGTCCTCTACTATACGGAACAGATGCGATTACCAATTTCTGCTT
TTTATGTGAAGTTGAGTGTGCGGATAGGGTATCTCTGCTAAAAAAAGGTT
GTGCAAGGGCAATTAAATTAAACCCATAATGGTAACATAATGTTTAGGGT
ATAGAACTGTTTCGGATCAGGAGGTTTTACTATTTCCTCTCTGACGTAAC
ATTTTCTTATCTATTAGTTAAAACTATGTTAGTAGGGGCGCAAGCCTGGG
GTCCCGGGACATCTTTTTTACGACCTAACCATTTTTAGTTTCTTCCAAAG
AACAGTATATTACAAGATATTTTTGAGAGGGAGGACGCGGAGTAGGCCCG
GGAAAAAACTTTATATATGAGAAATAGCAATCAGGAAAGTAGCCTAAAAA
CTATACTCTTTTCTCTCTCATCTGATTTCAATAAAAATTCATTTTACAGA
CGTTAACGAGTGCAGGCTAAAACTTCATCAATGTAGCTATCAGTGTATCA
ACACACCCGGCTCATATTACTGCAAGTGTCCAACTGGTTATGAAGCAAGA
TCAACCAAAGCTTGTAATGGTGAGATTTTTAATATGTTTTCTAAAGCTAC
TGGAGAGCTGAGAGAATACGTCATATCGTCCTTCGTTCCGAGCGTAAAAC
TCCTACTATTCGGGATATGCGCACTGCTCTTTTTTTGAATATTGAATTAA
CACTTTATCCAATCAGAGAGTTTGTTTACTTGAAATTTTTCGTGCCGCTT
ACACGGAATCAAAGCACGAAAGATGAATTCGAAACCCATGTATTGAACAA
AGGAGATTCTCGTGGGATATAAGAATGGGAATGACCATCGGTACTAAAAT
ACCATTCATTCTCATGAAATATATCAGAGAACTTTCCTTTTACCTTTAAC
ATAACAATTTTGTTTCCCAATACTGAATCTTAGATCCGGATAGAAACTTA
CACATATTACTTCCCTTCTTATAGACATTGACGAGTGTGCGACAGGTGGA
CATGATTGTTCAGGAAGTGAACGTTGTTTCAACACGTATGGTTCGTACCG
TTGTATCGATGAATCGTGCCCTGCTCCTTACTACATCCGAACTGGTCGAA
AGTAAGTCCCTTTTTGAAATTAAAATAATTATTAGGAATAGTTCGTTCTG
TGGTCTACACCCTGGCAAGCAATCTTCCAATAACTATTGAACTTTTTGCT
GTTGGGCAAAACCTTGACTGGCATTTCCATAGTCTATAGTCTAAAGTATC
CAAAATCAATATGGAACTATTGGTTTTGGTAAGGGTTAACTCCGTTATAT
TTGTATTTACAATCCCCGTAGCTTATCTCGACACAGACAAACATTAAAAC
AAAAAGCACACCACAATTTCACAAACTCTTTCTCACGATAAACGCAATTT
GCTTTTGTAAGATAAGTATAGAATCAAGAAAAGATATATGATGTTGAACA
AAATTCCACTAACCTCCAATCCGAGGTTTTAGTCAGCTTACATCTTCACT
CACTTTCCCACAAACTCACCAACAAACACACCAGTCACTTAACATTATTC
CTTTCCAGGGATCGACCGCAAGGCTGCCAAAAACATTGTTATCACATCAA
AAGCCTCAAAACAAGAAAACTCTGTCAAAATAAGAAATCCTTTATCGCTA
TTCGCAGAAGACTCTTTGAATTCCAAAAACAAATCTCGGTTTTTACTGAA
ACCGTTAACGGGACAAGAATCCGGAAATCCGAATTTCGATTCCGATATTG
GTGGACTTATTCGAATAAACATCACCATGTTAAAGTCCAAATTGTGAAAG
GTTAGTGAAAGTTTTTTTCTCTACAAAACTACGACAATCAGTTTTGAAGG
AAGGGTGGTCAATAGATAGATATTTCCAGAGGAATCAGAAATCTTTAACG
TACGACCTGTGAAAACTGGAGAAAAATATTTATGGATACAAAACAAGGGC
GGGTGTATTATTTTAAGGTATCCTATTTGGTTAAAGTTGTTCATACAAAC
CGATAGATTTCAATGCATCTTGTATTCTTTTGCTTAGACCTTTATAGGCC
TTACAGTATCTCATTTTGACCTAGTAGTTGTTTTAAAAAATTAGAAGCCT
AAGTAAGACTTTGCAGCATTTAAATCACACAACAGACTGACTAAATCTCA
TCCCTTATACCTCACAGGTAACGAAGACGGTTACTTCGCGATCGAACGCA
AAGAGGGAGCTCATGAAATCTTCCTCTTTAATAAATACGACATCAAAGGA
TATAACCAATTCCATCTAGTGATGGAAACTGAAGTTACCCAACAAACTAT
TTCATCAACAGCTTCGTGGCGTTATCAATATCATTTCTACATCTCTGTAT
CCAACCATCAGTTCATTCGGCCACCAACGACCAAGGTTTAACATAAAGAA
GAAAAGTCGACGATGTAATATGATGGTCTGCGTTGATGAATTGAAATAGT
CGCTGCAATCTTTTAGTTTTTATATGCTCCCACCCCAAATATTCGTCAAT
TTATTTTGTAATTTAGATTTTATAAACCATGCTAATACACTAATGCACTG
TAAATACAATGATGATACCAGATGTCAAAACGAAATTTCTGTTAATAGTT
TTTCCAATTCACTTTTTTTCAAACCAACTCCTGACTAATAAATTGTACAT
CGTCATCGATAAGAAAACTAACATTTTTGTCGCACTTTCATCCAATCATA
TTTTGCAGCGTATGCCGGAAAGTCAATTGTTACGGAAACCCAAAATGCCG
GACACTCCCAACACAGAGCATCAAATGGTCACACTACAAATTTTATCGTG
ATTTCCAACGACATGGTTTTGTTTTCACTTACTCCTTGTCAGGATTTGGC
CCCTCGTGGAATCTGAATTTCGAGTTTGCTTCAGGTAAAAAACACTTCTC
TTTGAGAGTTCCTTTGTGGACTATAACACATCAATCTTGCTGATTTTTCT
TACGAAAGAACTTTTCTCTTGACGAGGATGGACTTATTTTCAGTCTGAAT
CACAAAACACTATTAGTCGAATGTATGTGCTTTACATACAACCACAAATG
CATTGTTTCTTTACCAGGATCCCTGCCCCTTTTGTGACTATCAACACTTC
ATGAACTTTTATTTATCATCCACCTGCTCTCTTCTGCAGGCAACACGGAC
GGTGCTTTCGAAATCTTACAAACTGATACTCGAGGACGCGTCAAGGTCCG
CAACAGTAAGGACATCAAAGGACCGAAAGATTACGAATTGGTTTTCCGAG
CTGATGCTTCAGATGCAGTGCACGGTCATCATCAACGATTTGTTTACAAA
ATCTTCATCAGCGTTTCACAATATCCTTTTTGATTTGATGTTTTGTAAAC
TTTGTATTTAATGACTTTAATAAGCTACTTGTATTGTACCTTACAATTTA
TTATCCATGAAATATATTTTGCTGAACTTTGTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033750XLOC_033750Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053459-exon-scaffold_231-1575043694:242463..242803TCONS_00053459-exon-scaffold_231-1575043694:242463..242803Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1575043694:241996..242248TCONS_00053459-exon-scaffold_231-1575043694:241996..242248Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1575043694:241537..241730TCONS_00053459-exon-scaffold_231-1575043694:241537..241730Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1575043694:240939..241085TCONS_00053459-exon-scaffold_231-1575043694:240939..241085Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1575043694:240596..240772TCONS_00053459-exon-scaffold_231-1575043694:240596..240772Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1575043694:240128..240280TCONS_00053459-exon-scaffold_231-1575043694:240128..240280Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1575043694:239719..239856TCONS_00053459-exon-scaffold_231-1575043694:239719..239856Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1575043694:239309..239437TCONS_00053459-exon-scaffold_231-1575043694:239309..239437Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1575043694:238735..238854TCONS_00053459-exon-scaffold_231-1575043694:238735..238854Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1575043694:238203..238329TCONS_00053459-exon-scaffold_231-1575043694:238203..238329Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1575043694:235870..236164TCONS_00053459-exon-scaffold_231-1575043694:235870..236164Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1510915933:242463..242803TCONS_00053459-exon-scaffold_231-1510915933:242463..242803Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1510915933:241996..242248TCONS_00053459-exon-scaffold_231-1510915933:241996..242248Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1510915933:241537..241730TCONS_00053459-exon-scaffold_231-1510915933:241537..241730Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1510915933:240939..241085TCONS_00053459-exon-scaffold_231-1510915933:240939..241085Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1510915933:240596..240772TCONS_00053459-exon-scaffold_231-1510915933:240596..240772Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1510915933:240128..240280TCONS_00053459-exon-scaffold_231-1510915933:240128..240280Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1510915933:239719..239856TCONS_00053459-exon-scaffold_231-1510915933:239719..239856Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1510915933:239309..239437TCONS_00053459-exon-scaffold_231-1510915933:239309..239437Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1510915933:238735..238854TCONS_00053459-exon-scaffold_231-1510915933:238735..238854Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1510915933:238203..238329TCONS_00053459-exon-scaffold_231-1510915933:238203..238329Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1510915933:235870..236164TCONS_00053459-exon-scaffold_231-1510915933:235870..236164Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1491911889:242463..242803TCONS_00053459-exon-scaffold_231-1491911889:242463..242803Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1491911889:241996..242248TCONS_00053459-exon-scaffold_231-1491911889:241996..242248Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1491911889:241537..241730TCONS_00053459-exon-scaffold_231-1491911889:241537..241730Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1491911889:240939..241085TCONS_00053459-exon-scaffold_231-1491911889:240939..241085Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1491911889:240596..240772TCONS_00053459-exon-scaffold_231-1491911889:240596..240772Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1491911889:240128..240280TCONS_00053459-exon-scaffold_231-1491911889:240128..240280Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1491911889:239719..239856TCONS_00053459-exon-scaffold_231-1491911889:239719..239856Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1491911889:239309..239437TCONS_00053459-exon-scaffold_231-1491911889:239309..239437Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1491911889:238735..238854TCONS_00053459-exon-scaffold_231-1491911889:238735..238854Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1491911889:238203..238329TCONS_00053459-exon-scaffold_231-1491911889:238203..238329Clytia hemisphaericaexon
TCONS_00053459-exon-scaffold_231-1491911889:235870..236164TCONS_00053459-exon-scaffold_231-1491911889:235870..236164Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_231supercontigscaffold_231:235870..242803 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0983219	4.8398e-10	0	0	0	0	0	0	0	0	0	0	3.67124	6.35628	0	0	7.6649	1.56558	6.96713	10.2531	27.0694	26.9856	1.41072	1.86918	0.655208	1.51686	0.326733	0	0.0588957	0
Blast
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BLAST of TCONS_00053459 vs. Swiss-Prot (Human)
Match: FBLN1 (Fibulin-1 OS=Homo sapiens GN=FBLN1 PE=1 SV=4)

HSP 1 Score: 170.629 bits (431), Expect = 8.815e-45
Identity = 136/452 (30.09%), Postives = 203/452 (44.91%), Query Frame = 2 
Query:  449 ADKFEEIQNKLNLQLNGATQKLLCKTIYKQCCISSVKSNFCTTGIELGQSNAICS---GGKNDIGGGAAMECCDCCKVGEKAASKREDCDAVKFKNDLCTHAYRKCCKDKEQEMPIQTTQTPQRKTCSDIVCDKASTV-------------SCGETNDGPVCHCKDGYFAGLDKITCHDMDECLANKTICSVGK-CQNTMGSYECVCDVGFEMQDNKCVKSTDKECRKGFEL-KDGECVDINECVTGAENCHSDLMCLNVNGTFRCIEPQNCHSKYQAIYSTITNKRYCEDIDECAIHGNQICRNPFTECINIVGGYQCKQ--TRCQDGLKL--LNGYCTDIDECIEQPGICGEKGRCINLSGSYSCICNEGYKPDPATKKCIDVNEC-RLKLHQCSYQCINTPGSYYCKCPTGYE-ARSTKACNDIDECATGGHDCSGSERCFNTYGSYRC 1732
            AD      ++ +  L  AT+   C+ + +QCC S ++   C TGI L      C+   G    +       CC CC +G  A ++ + C+        C   ++ CC   ++   +      +     ++  ++                  C +T D  VC C  GY    D ++C D++EC+     C +G+ C NT+GS+ C                 D  C  G+EL +D  C DI+EC +G  NC  D +C N  G+FRC     C S +  I   + N   C DI+EC +  +  C    T CIN  G Y C++    C  G  L      C D+DEC      CG+  RC+N  GS+ C C  GY  D  ++ C+DVNEC R     C ++C NT GSY C C  G+  +   ++C DI+EC++       S+ C N YGSY+C
Sbjct:   38 ADGHRMATHQKDCSLPYATESKECRMVQEQCCHSQLEELHCATGISLANEQDRCATPHGDNASLEATFVKRCCHCCLLGRAAQAQGQSCEYSLMVGYQCGQVFQACCVKSQETGDLDVGGLQETDKIIEVEEEQEDPYLNDRCRGGGPCKQQCRDTGDEVVCSCFVGYQLLSDGVSCEDVNECITGSHSCRLGESCINTVGSFRC---------------QRDSSCGTGYELTEDNSCKDIDECESGIHNCLPDFICQNTLGSFRCRPKLQCKSGF--IQDALGN---CIDINEC-LSISAPCPIGHT-CINTEGSYTCQKNVPNCGRGYHLNEEGTRCVDVDECAPPAEPCGKGHRCVNSPGSFRCECKTGYYFDGISRMCVDVNECQRYPGRLCGHKCENTLGSYLCSCSVGFRLSVDGRSCEDINECSSS----PCSQECANVYGSYQC 463
The following BLAST results are available for this feature:
BLAST of TCONS_00053459 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBLN18.815e-4530.09Fibulin-1 OS=Homo sapiens GN=FBLN1 PE=1 SV=4[more]
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