TCONS_00053546 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053546
Unique NameTCONS_00053546
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2059

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053546 ID=TCONS_00053546|Name=TCONS_00053546|organism=Clytia hemisphaerica|type=transcript|length=2059bp
aatagaTTCACGTAAAAGTCaagtgaaaaacaaaaaaatcaacgtAAATG
TACGTAAAACAGAATCAATGCTATGTTCattaaaaattcattattttgtc
GAATGAGTTTCAATGGATGCACTTGGGTATCTCAACAAAATCAAagatgg
aaaaaaaatcaaacaagatATTTTAAATATGAATGATGGTTTTTGAATTA
AATGAATAACAATGAATGGTCTTTTGCTTAGTTACTACTGATGGACTATA
TTGTTGGATTATCAATCACTGAGGAGGAGTTACATAAATGACATCATACA
TTGCTCTTCCATTGTTAAGCCTCTACCACAGGGTTTGTTTTTCATCTcac
atatttttcaaagattgctaAATGAATAAGCCCAAACTGTGGAGGTCAAT
CGTaccattttgaataaaatccTACGATATTTATGGCCCTCCTCCACAGA
CTCTCGTGACACTTTGCACTGAAATCAATGAGATTCGTGAAATTGTTGAT
TCATGCATATATAACTGTCATATTAGAATTGAACAACATAAatttactga
atgaaaaatgagatATTGTAGGAAATGAAACCTTGGAgatctttctttgt
tttgattatttttcatagatttttgcGGTTTTGACGAAAAGGAAGAATTG
ACCAAAGAGAAGCAATTTAAACGTGATTGAATGGGGTATTGTTAAAGAAG
TATGTCCACAACAACAAGCAATCCTTACTATAATCAACGAAAGATGACTC
GCCATGAACTGTTGAAAAGTAATGTAGAACACCGCCATCATAACCACCCT
ACCAAGAAGACCAACACTTTTGTACCGCCCAAAGATGCCCTGATTGAAGA
AAATTGTGTTGGAGATTTCAACAATGAATACAATATTGTTATAATAGGCG
ATCGTGGTGTAGGGAAAAGTTCGATTCTCTTCAAACACACGACTGACATG
TACAGTCAGACGTATCTTCCGACAATTGGTGTTGATTTCCGACGAAGTGT
TATCAAGTCACGTGACAACGATATCAATGCCACCTTAAAACTATGGGACA
CTCCTGGCACAATACCTGAAATCAAACCAACTTCAAAAGATTTGTTCCGC
TCGGCTTCCGCGTTTCTCTGCATCTATGACGTCACTAATATCGAATCATA
CAACAACATGTACCATTGGATGAACCTGATCCGAAAGTACTCTTTGGACC
AATCACAACTCGTTGTTATTGGTAACAAAACTGATTTGACCAATGAGAGA
AGACTTTCAAAGGAAGATGGGATGCGATTGGCCGCATCATATGGTGCTAA
ATTCATGGAAACAAACGTGCCACAGAAACGTAATatacaaaaactttttg
aaagacTTGCAGTGAATTTATCGAAATGAAGCGAGTCTGAGCGAAACATT
GATCATTTTCAAGCTCAAAATTATGAAATAGATTGCGAGCATCAGTGAAT
TTCAAGGGAATTTCAAAACTATTGAAAATCTTCAACATTAGTTCCTCAAA
CTTAAAATAGGgataaaacagaaaatttcaaagcaacCAATCAAATAAAG
ATGGCGATCgaacaaagaaaacatttttcaatacAACCTAAACAACCTCA
GTATCAGGGAGCTACCAAAGCTGATCGAATCGTATATTGCATAAGTTAAA
CGAGCATAgacatttatttcaaaaataaaatttatgaattcttttgcttt
gaaaatgGCTGCAGTTATCACAGCAAAACATCTCGGATAGATTCACAATG
AAAGGCTACAATCTACTTCATCAGCTTTCAACATAAATTGAATTTGTCTT
CGATTTTTTTCTGATGTCACGCAAGATTGAACAGATAGAATTGTTATAGA
GTTCTGTGTAAATTCATTGCTTTGTGGTAAAAGAATGAGTTACAACAGGC
CAATAAAAGAGAGACAATTTATTTTCTATTATTTCTGACAATATTCTGTG
ACAATTTCTTTatctaaatttcaaaatttgctgGGATAATAATAAGTACA
TGAAAAAGATTTACAATAAATTAATAtgagaaaagaaattttgtgtTTTA
AGAATTTGg
Run BLAST on NCBI

transcript from alignment at scaffold_233:427423..434926+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053546 ID=TCONS_00053546|Name=TCONS_00053546|organism=Clytia hemisphaerica|type=transcript|length=7504bp|location=Sequence derived from alignment at scaffold_233:427423..434926+ (Clytia hemisphaerica)
aatagaTTCACGTAAAAGTCaagtgaaaaacaaaaaaatcaacgtAAATG TACGTAAAACAGAATCAATGCTATGTTCattaaaaattcattattttgtc GAATGAGTTTCAATGGATGCACTTGGGTATCTCAACAAAATCAAagatgg aaaaaaaatcaaacaagatATTTTAAATATGAATGATGGTTTTTGAATTA AATGAATAACAATGAATGGTCTTTTGCTTAGTTACTACTGATGGACTATA TTGTTGGATTATCAATCACTGAGGAGGAGTTACATAAATGACATCATACA TTGCTCTTCCATTGTTAAGCCTCTACCACAGGGTTTGTTTTTCATCTcac atatttttcaaagattgctaAATGAATAAGCCCAAACTGTGGAGGTCAAT CGTaccattttgaataaaatccTACGATATTTATGGCCCTCCTCCACAGA CTCTCGTGACACTTTGCACTGAAATCAATGAGATTCGTGAAATTGTTGAT TCATGCATATATAACTGTCATATTAGAATTGAACAACATAAatttactga atgaaaaatgagatATTGTAGGAAATGAAACCTTGGAgatctttctttgt tttgattatttttcatagatttttgcGGTTTTGACGAAAAGGAAGAATTG ACCAAAGAGAAGCAATTTAAACGTGGTAggattttccttttattttctgT AACTACGGTTGAGTGATAAAGGGCGGTTATGCAGCCTCCCCAAAAGTGAC CGTTCcctactaccttaagggaactagtTTTTTTGCAGTTCGAGGGTACC AAATTGGCGCAATTTGCAGAACTGATTTTTGCGATTGACACCCGCTTTTT GCcgaaattctttcatattctttagggtttttgaggatttttagtaaaaa ttacatttcacggaactaattttcacggtagacaccgaaaaacgcgaaaa ttagttcccgcgaaaattagttcttctAAGTTCCCTTAAGTTCCCTTAAG TCAAGGTAATTCATAAacttccttcaaaatttgattttcattttcctctT TCTTAGTAGGGGGCCAACCCATTAGGGTTCGTTACATCTGTTGAACGAAT AAGGCCTTGAACGCCCGTGAATAAGGCCTGGCAAAGCTTTCTATAATTAA AACAGTTTCGTTACAGGCAAAATTCCTAACCCCCAAAAATATTTCGCCAG TCCCAATATTCGGGGTCccttctcaaaaaagtttcaaaatcctATCTATT TTCGAACTAAAAACATGGGGTTGCGTCCCATGAAAGCTGCCATGAATACT AATACTAtctaataaaattaattttgagcTTGGCAAGAATTTCCTTGTTT GATGTCACGGGCTTGATaataaaatgttgataaaatttaCTGCAAACTTA TGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtac cttaagggaactagtTTTTTCGCAGTTCGAGGGTACCAAATTGGCGCAAT TTGCAGAACTGATTTTTGCGATTGACACCCGCTTTTTGCcgaaattcttt catattctttagggtttttgaggatttttagtaaaaattacatttcacgg aactaattttcacggtagacaccgaaaaacgcgaaaattagttcccgcga aaattagttcttctAAGTTCCCTTAAGTTCCCTTAAGTCAAGGTAATTCA TAAacttccttcaaaatttgattttcattttcctctTTCTTAGTAGGGGG CCAACCCATTAGGGTTCGTTACATCTGTTGAACGAATAAGGCCTTGAACG CCCGTGAATAAGGCCTGGCAAAGCTTTCTATAATTAAAACAGTTTCGTTA CAGGCAAAATTCCTAACCCCCAAAAATATTTCGCCAGTCCCAATATTCGG GGTCCCTtctcaaaaatgtttcaaaatcctATCTATTTTCGAACTAAAAA CATGGGGTTGCGTCCCATGAAAGCTGCCATGAATACTAATACTAtctaat aaaattaattttgagcTTGGCAAGAATTTCCTTGTTTGATGTCACGGGCT TGATaataaaatgttgataaaatttagtgcaaacttatgaaacaattctt ttgtgaattacgATTAATGCTCAAGCtttatcaatccttttacctaagta attccaaaaaatgaaacgtgacggaatattgtcggattttttatgccaat tttgaaatacaggtgGCAACGAAGCTTgcttcaaagacacaatggaAGTT AGACGTCCAGtatcgtttatatgttcatgatatcATAAATAACACATTCT AATCTTATATCAATTCGCCTCCAGGAGGGGAAGAAAGTGCTGCAACatta aaaagaacgacaaattgctaaaagaacgacaaatttcaccaTCCACAATC CCGACCGATAGTGATTGTACCACCCCTACGTATTCATTCTCTATGTGCCA GCCGCGACTGTGACTCGTTTGTCTGATTAACAGATGCATTTACAAATCTC AAATTATTCTCTTACAATAGATTGAATGGGGTATTGTTAAAGAAGTATGT CCACAACAACAAGGTAAAGTCTCTATTGTTCAAAATTGAATGCGATTATA TCCATCTGCTTGTTtctcgtttttcattttctcgaGACTTTCGTGATACT GTAGAACCCGATTTTAATCGGAATAATTTTCgcaatttcgcgaatttttg gaTTGGGTTGCTGACTCTATTCAGAATgatgatttttgtcaaaatgttaa gaatatctttgttgaaattgaaatgaaataggGACTGGGGAAGAGTTTAT ACATATTTCTTTATTCTCTAGCAATCCTTACTATAATCAACGAAAGATGA CTCGCCATGAACTGTTGAAAAGTAATGTAGAACACCGCCATCATAACCAC CCTACCAAGAAGACCAACACTTTTGTACCGCCCAAAGATGCCCTGATTGA AGAAAATTGTGTTGGAGATTTCAACAATGAATACAATATTGTTATAATAG GTATGAGTCACCTAGCAGTTATATAAGTTGTGTTTTTTTGGGCGATGGAG ACGAttggtttttattttgcttatatcctgactgactgaggatgACGGAA AGTCAGAATATTAtcaccgtcctcgattttgtatATGTTGTGTTTTTTTA GGGGGGAGACAGttggtttttattttgcttatatcctgactgactgaaga cgacggaaaatcaaaattatcaccgtcctcgattttgcgtaTTAGAACTG GAAGCTGTTCCGAATTCGAGAttctaaagtttcatttttatcatcCTACA TTTTTTCGAATTTGAACCGGTCTTTTATCTTTCCACTCCCAGGCGATCGT GGTGTAGGGAAAAGTTCGATTCTCTTCAAACACACGACTGACATGTACAG TCAGACGTATCTTCCGACAATTGGTGTTGATTTCCGACGAAGTGTTATCA AGTCACGTGACAACGATATCAATGCCACCTTAAAACTATGGGACACTCGT GAGTAAGATTTATTCTTTTTATACggccaaaatcgaaaaaatatattttc tttcttcGTTTTTTAGAAGTTCTAACTGCAAATGCAACATTATCTCAGCT TTCGAGAAAGCAGAATAGGTCATGTTTGGGTTCCTtggaaatcaaatttt tcgaatttgGTCCAAATGGAACAAATTTATTTGGGGCTATAAAGAGTTAT GGTATTTAGAGTAGTTGAGAGTGATGGTCAAGTGTGATAAAGTCAAGCTG TTACCAGGTTTCAAAACTGAATGGCCGAAAGGAATAATAATATTTCGATA CTTATCAAGCATCTTATTCTTCTTCGAACATCATTTTTACAAACAATTAG ATGTAATATATGATTTTCTCtctaatatttaaattttgCAGCTGGCACAA TACCTGAAATCAAACCAACTTCAAAAGATTTGTTCCGCTCGGCTTCCGCG TTTCTCTGCATCTATGACGTCACTAATATCGAATCATACAACAACATGTA CCATTGGTAAGTTGCAgtttagagatttttttataagaacataagacttc gatggccgaaatcttaagaacaagttaagaatattttgaggCTTTAAAGA TTTTAGAACACCCGATTTCTTGAGAAATGGACGAGAGTACTCACAAAATG AGGAAAACAAATACATTTTAAGACTTGagcctcaaaaagttaagaacacc aaAAGGCATAAAAaatcttggatgttcttataaaaaaataccatTCTAAG CCATTGAACTAATATCAGTCCATTTGCATACGATGTGtaccttttttttt tgctaccatgtggaaaccactcttaAAGGGGTTGGCTTAATGATGCTGGT ATAGGCTactggcatccactaacagattcgtgctccttatagactGCCTG GGGTTTCGTAGAGgactgcgattcagactaatgcTTGTATGGTTTCCAAG TTGTAGCAAAAAGGGTTTAATACTGAAAGCGGGCAACATCTTGAATATTG TTAGATACCTCTCTGTCAAAAATAAGCATTTCCCTATCACGGGAAAATAA TTTTAGCAATCGGGGAATAGCGAACTTAATTCCATTTTGACCTTAAGTAG GCTTATCTTCCTGATTTCATTTCTGTATATCTTATACGCGaactagtttt ttttttgagcagcaaaaacctttaaaaattgaaattattctatGAGGAAC GTAATTTGACAGGGTGAATTGTTTCTTTGCCTAAAGAAGTCGGTGTTTTA GGGAATAGGGGTTAGTTTGGAGATTTATAAAAAAGGGTGAATTGGTTTTT TCTTGCATAAAGATTgatgtttttgtgaaaaattagggttcatttttagt ttattaaaaaactttcaatcttGGCGATTATGTTTAATTTTGACATTTCA TTTTGTTCTTTAGGATGAACCTGATCCGAAAGTACTCTTTGGACCAATCA CAACTCGTTGTTATTGGTAACAAAACTGATTTGACCAATGAGAGAAGACT TTCAAAGGAAGATGGGATGCGATTGGCCGCATCATATGGTGCTAAATTCA TGGAAACAAACGTGCCACAGAAACGTAATatacaaaaactttttgaaaga cTTGCAGTGAATTTATCGAAATGAAGCGAGTCTGAGCGAAACATTGATCA TTTTCAAGCTCAAAATTATGAAATAGATTGCGAGCATCAGTGAATTTCAA GGGAATTTCAAAACTATTGAAAATCTTCAACATTAGTTCCTCAAACTTAA AATAGGgataaaacagaaaatttcaaagcaacCAATCAAATAAAGATGGC GATCgaacaaagaaaacatttttcaatacAACCTAAACAACCTCAGTATC AGGGAGCTACCAAAGCTGATCGAATCGTATATTGCATAAGTTAAACGAGC ATAgacatttatttcaaaaataaaatttatgaattcttttgctttgaaaa tgGCTGCAGTTATCACAGCAAAACATCTCGGATAGATTCACAATGAAAGG CTACAATCTACTTCATCAGCTTTCAACATAAATTGAATTTGTCTTCGATT TTTTTCTGATGTCACGCAAGATTGAACAGATAGAATTGTTATAGAGTTCT GTGTAAATTCATTGCTTTGTGGTAAAAGAATGAGTTACAACAGGCCAATA AAAGAGAGACAATTTATTTTCTATTATTTCTGACAATATTCTGTGACAAT TTCTTTatctaaatttcaaaatttgctgGGATAATAATAAGTACATGAAA AAGATTTACAATAAATTAATAtgagaaaagaaattttgtgtTTTAAGAAT TTGg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033800XLOC_033800Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053546-exon-scaffold_233-1491911889:427423..428097TCONS_00053546-exon-scaffold_233-1491911889:427423..428097Clytia hemisphaericaexon
TCONS_00053546-exon-scaffold_233-1510915933:427423..428097TCONS_00053546-exon-scaffold_233-1510915933:427423..428097Clytia hemisphaericaexon
TCONS_00053546-exon-scaffold_233-1575043694:427423..428097TCONS_00053546-exon-scaffold_233-1575043694:427423..428097Clytia hemisphaericaexon
TCONS_00053546-exon-scaffold_233-1491911889:431643..431685TCONS_00053546-exon-scaffold_233-1491911889:431643..431685Clytia hemisphaericaexon
TCONS_00053546-exon-scaffold_233-1510915933:431643..431685TCONS_00053546-exon-scaffold_233-1510915933:431643..431685Clytia hemisphaericaexon
TCONS_00053546-exon-scaffold_233-1575043694:431643..431685TCONS_00053546-exon-scaffold_233-1575043694:431643..431685Clytia hemisphaericaexon
TCONS_00053546-exon-scaffold_233-1491911889:431944..432122TCONS_00053546-exon-scaffold_233-1491911889:431944..432122Clytia hemisphaericaexon
TCONS_00053546-exon-scaffold_233-1510915933:431944..432122TCONS_00053546-exon-scaffold_233-1510915933:431944..432122Clytia hemisphaericaexon
TCONS_00053546-exon-scaffold_233-1575043694:431944..432122TCONS_00053546-exon-scaffold_233-1575043694:431944..432122Clytia hemisphaericaexon
TCONS_00053546-exon-scaffold_233-1491911889:432465..432620TCONS_00053546-exon-scaffold_233-1491911889:432465..432620Clytia hemisphaericaexon
TCONS_00053546-exon-scaffold_233-1510915933:432465..432620TCONS_00053546-exon-scaffold_233-1510915933:432465..432620Clytia hemisphaericaexon
TCONS_00053546-exon-scaffold_233-1575043694:432465..432620TCONS_00053546-exon-scaffold_233-1575043694:432465..432620Clytia hemisphaericaexon
TCONS_00053546-exon-scaffold_233-1491911889:433014..433128TCONS_00053546-exon-scaffold_233-1491911889:433014..433128Clytia hemisphaericaexon
TCONS_00053546-exon-scaffold_233-1510915933:433014..433128TCONS_00053546-exon-scaffold_233-1510915933:433014..433128Clytia hemisphaericaexon
TCONS_00053546-exon-scaffold_233-1575043694:433014..433128TCONS_00053546-exon-scaffold_233-1575043694:433014..433128Clytia hemisphaericaexon
TCONS_00053546-exon-scaffold_233-1491911889:434036..434926TCONS_00053546-exon-scaffold_233-1491911889:434036..434926Clytia hemisphaericaexon
TCONS_00053546-exon-scaffold_233-1510915933:434036..434926TCONS_00053546-exon-scaffold_233-1510915933:434036..434926Clytia hemisphaericaexon
TCONS_00053546-exon-scaffold_233-1575043694:434036..434926TCONS_00053546-exon-scaffold_233-1575043694:434036..434926Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:427423..434926 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0794695 0.0992657 0.0886462 0.234702 0.323426 0.410505 0.487499 0.430825 0.241784 0.240115 0.60911 0.264338 0.0705164 0.0198279 0.0869416 0.0858965 0.0283591 0.0636899 0.0278674 0.0514992 0.229602 0.262517 0.205972 0.191883 0.17173 0.175787 0.0868745 0.0890936 0.090372 0.0878898
Blast
BLAST of TCONS_00053546 vs. Swiss-Prot (Human)
Match: RAB3D (Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3D PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.625e-32
Identity = 61/182 (33.52%), Postives = 106/182 (58.24%), Query Frame = 3
Query:  813 NTFVPPKDALIEENCVGDFNNEYNIVIIGDRGVGKSSILFKHTTDMYSQTYLPTIGVDFRRSVIKSRDNDINATLKLWDTPGTIPEIKPTSKDLFRSASAFLCIYDVTNIESYNNMYHWMNLIRKYSLDQSQLVVIGNKTDLTNERRLSKEDGMRLAASYGAKFMETNVPQKRNIQKLFERL 1358
            +T   P+DA  +     +F+  + +++IG+  VGK+S LF++  D ++  ++ T+G+DF+   +   D  I   L++WDT G     +  +   +R A  FL +YD+ N ES+  +  W   I+ YS D +Q++++GNK DL +ER +  EDG RLA   G +F E +  +  N++++FERL
Sbjct:    6 DTQAGPRDAADQ-----NFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIK--LQIWDTAGQ-ERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERL 179          
The following BLAST results are available for this feature:
BLAST of TCONS_00053546 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RAB3D5.625e-3233.52Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3... [more]
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