TCONS_00053559 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053559
Unique NameTCONS_00053559
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1293

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053559 ID=TCONS_00053559|Name=TCONS_00053559|organism=Clytia hemisphaerica|type=transcript|length=1293bp
ATATTCTCAGCAATTCTCTTTTCGTTACTATCGGAAAAGCAAACTGTATT
TTCTTCACAAGGGGTATGATAAATGGGCCGTACAGACCTTTTTCTTTTAC
TATCTTCAATTCTCTCTCCGTGAGCCTTCTATTATTGCCAAAGCATTCTA
ACTTTTCTTCACAAGGAAGAGAAGGTGGTGTATGCCTTTTTTTTCTTGTA
GTGTTACAAACATAGTTTACTCTACAGTTTCTTTTAATATCATcaaaatt
gaaagtttgaatATCGTAATTAATATGTCgttttttttgcttcaaaaccC
AGTGGTATGAATGATACATAGTTTTATAAGGATTTTCAACACGAGTCACG
TGGTGTATCTTGACGTTGAACGAAACACCGGTCAACCGCAAAGTGTCATT
TAAGCTCTCAATAAAATCAAACACTTTCCTAACGTCAATTCCATCTTTGA
AATCACTTGACGCTCCTTCGGTGATTATAAAACTGATATCAAGTTGATTT
TTCTCCAAACAAGTCGTATTTATTGAATTTTCTGTTATCCCTAGTTCAGT
TCCTTTGTAGTCAGGATTACGTAATATGTTTCTTACGTCATCAAATTGTT
CCATATGCCTGCCAAGATGGTACCACAAGTTTCGACGCTGGGTTGAAAGC
CAAGTGAAGTTTGGAGGATACATAACCATTGACAATAGGATGATTGcata
ttgttttttgttttgaagctTTGATAAAGCATCTGTTGTTTTATCGTCGA
TTGAGTGACCAGCGATATACAAAACGACATTACGCATTCCCTTAGTATTT
CTTCTCAGCTCTTCCTCAAAGAATTTGTGAGAGCCAATAGGGTAGACAGG
GTCCTTAATAGGATCCTTCACCTGAGGACGTTGCTGGATGAATTGGTTAG
GTTCGTCTAGATTAATCGTGATGAGGTCATTGTAATATTGATCAAGAACC
TTTGGAACCAAATCTTTAGAATCTCGGACGTTCATTACTTTCTGTTCCAG
CTGATCataaaaacatatttcataACATTCATCAGTGTGGAATTCTCTCA
ATAACATGTCAAAGAATTTAAGCCACTCATTTCTAGGATAAACTTCGACA
GGATTAACATTGTCAGCACGGACCAACACTTTATACATTACGAGTGGCTG
CCAAACAACAATGATGCGAGTCTTGTCTAcacaaaatgaaaagttttctg
CAAGTGAAAAAGTGACATTTCTAATGATCAATAAAAGCACTGGTACTATT
GCCAATGAAACTTTCATCTCGAACCGATTTTTCTATATGAACT
Run BLAST on NCBI

transcript from alignment at scaffold_233:502748..517943+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053559 ID=TCONS_00053559|Name=TCONS_00053559|organism=Clytia hemisphaerica|type=transcript|length=15196bp|location=Sequence derived from alignment at scaffold_233:502748..517943+ (Clytia hemisphaerica)
ATATTCTCAGCAATTCTCTTTTCGTTACTATCGGAAAAGCAAACTGTATT
TTCTTCACAAGGGGTATGATAAATGGGCCGTACAGACCTTTTTCTTTTAC
TATCTTCAATTCTCTCTCCGTGAGCCTTCTATTATTGCCAAAGCATTCTA
ACTTTTCTTCACAAGGAAGAGAAGGTGGTGTATGCCTTTTTTTTCTTGTA
GTGTTACAAACATAGTTTACTCTACAGTTTCTTTTAATATCATcaaaatt
gaaagtttgaatATCGTAATTAATATGTCgttttttttgcttcaaaaccC
AGTGGTATGAATGATACATAGTTTTATAAGGATTTTCAACACGAGTCACG
TGGTGTATCTTGACGTTGAACGAAACACCGGTCAACCGCAAAGTGTCATT
TAAGCTCTCAATAAAATCAAACACTTTCCTAACGTCAATTCCATCTTTGA
AATCACTTGACGCTCCTTCGGTGATTATAAAACTGATATCAAGTTGATTT
TTCTCCAAACAAGTCGTATTTATTGAATTTTCTGTTATCCCTAGTTCAGT
TCCTTTGTAGTCAGGATTACGTAATATGTTTCTTACGTCATCAAATTGTT
CCATATGCCTGCCAAGATGGTACCACAAGTTTCGACGCTGGGTTGAAAGC
CAAGTGAAGTTTGGAGGATACATAACCATTGACAATAGGATGATTGcata
ttgttttttgttttgaagctTTGATAAAGCATCTGTTGTTTTATCGTCGA
TTGAGTGACCAGCGATATACAAAACGACATTATGCGTTCCCTTAGTGTTT
CTTCTCAGCTCTTCCTCAAAGAATTTGTGAGAGCCAATAGGGTAGACAGG
AGCCTTAATAGGATCTTTCACCTGAGGACGTTGCTGGATGAATTGGTTAG
GTTCGTCTAGATTAATCGTGATGAGGTCATTGTAATATTGATCAAGAACC
TTTGGAACCAAATCTTTAGAATCTCGGATGTTCATTACTTTATGTTCCAG
CTGATCataaaaacatatttcataACATTCATCAGTGTGGAATTCTCTCA
ATAACATGTCAAAGAATTTAAGCCACTCATTTCTAGGATGAACTTCGACA
GGATTAACATTGTCAGCGCGGACCAACACTTTATACATTACGAGTGGCTG
CCATACAACAATGATGCGAGTCTTGTCTACACAAAACGAAAAGTTTTCTG
CAAGTGAAAAAGTGACATTTCTAATGATCAATAAAAGCATTAGTagtatt
gtcaataaaactttcaTCTCGAgctgatttttttgtttgaacTAGACTAT
TCAGTGAGAAAATTTAATCCTTTAGGTTGAAAATTACTGAGCAATTCGAA
CAGAGAGACTACATTGTCAAAGGGAACAAGCCAAGATaaacaatcttttc
aaaatatgttttttgagAGGTTCCACTTCATGAAAAGACGTAAGCATATT
GTTTTTAAATGTCAAGTTAACCAAAATTACATGGAATCAATGCCAAAACA
CTTCTTTTGTACGTAGCGACGTGAATGTAGCTTAAGTGGCAATCTGCAAT
ACAGAGTGTCCGGAAagaaagtatcgagtcgtacaacttctatagaaaga
aagtttttgTGTTTGCTTCACTAAATTTGTAATGTTTATCAAAGGCCTCA
AAGCTTCTCTTTGTGTCATATTAATTTTCacgagacatcttttatgaata
atttttacaaaaaatgattctcaataactttaacgtattgaaaattgtaa
agaaagttaattataatgactgttgtaaaaacagTTATTGTgatggtata
tattttcttacattttgttaaacacacgcaacaaccttctcATGTTCGAA
CTTCATACTTTTTTTCAGACAccctgtatttcaaaatcagTAACAGTACT
AGGCTGCTAGGGCAAAATtggttacggggatgcgccgctggtcaggttac
cttttttaacctcctcaagtcccaggtagggtcgcaaaaacaccaaaatg
aaaaaattattttctcatgcttgattggattcttttgaattctcaaaaaa
ttatgcacataatttgattattttcaactggaaatttcgggcacttcggt
cccctcaatgcaaataagaattacatatttgaaatcagctctTTTCATAG
ATTCACCAGtgttgaaaactatttgaaaaggcacttctaagaaaagaaat
ttgggtgtgaagttttcacctaaattagtTATTCTTTCCATGtagaataa
aattgattttttatttttaggagtTAAAATCGATGGAATCACTAAATTTC
TGCTCCTAAAATTCCAGATTGTAAGctaaaatagatttgtaaatatcaat
tgttttccaaaactaaaaatttcgtaACTTAGAAAAAATACCGTGCAAAC
ATACCCTTTTAAAGATTTCCATCCACGCattttgagaaactgtttttacg
accaataatcacttttaacaaagggaatctgaatagatgatgaagtagcc
aaagtgagatattattctatctgataacaGTTCACTGCTCATAGGGTGCA
TTTTTTGTGAGCTTAAATGACACTTTGCGGTTGACCGGTATTTCGTTAAA
CGTCAAGATACACCACGTGACTCGTGTGGAAAATCCTTATAAAGCTAATA
TATCATTCATACCACTGGTTTTCAAGTTTAAGTCCGTATAGATATGTCAG
GTATGATTATTTGAACTGTTGATTTTGATGATATTATGCCGGCTAGGATG
AAGAAGAGACATGCAGAAGAGCAACAATCTACATCCGAAAACAATGCAAT
AACAGTCTTGCTTGTGTCAAAAGTATAATCCCTCTATCGAGGAAGAGTTT
TGGGGAGAAAAACGAGAAATAGCCTCAAAATTGAATCAACTAAAAAACGC
CGTCTTTCATAATATAATGATCAATATTATTATATACTAACCTATAATCT
ATAAttctatctaagaaataagcccaaagctGAAAGAAATTTACCAACGG
GTTTTTTTACTGAAAAGAGTTTGCAGCCAAATTATATTTTctcgccttta
ctatcactatAACATACAATAACATCGTCTAAATTATTATAACAGACGCG
ACTGGTAACTTGGACCCAGCCCTCAAGGCTCTCAAAACGCAAGAAGCTGT
TAAAATTTATGGCGTTGATAATGAGAAATTCATTCCCAGTATGACCGTTG
ATGATATTATTCAAACATCGCGCACAGATCTCACCTTGAAGCAgttttat
gaatatttttttgagaTACTCAATAAAGAAGTTGAACGTTTCAGTTCTGG
CGGAGAAATTGTTGAATTATATTCTAATTTCTTAAGTTGTTGCTGGTGGT
ATACTCTAGGCTGCTTGCAATCAACTAACTGATTCCTATCTGAAACTTTA
TTAACTcgatgaaaaatcttaaaatgtcGTATTTCGTAATTGCGTAAACT
AAATGACAAAATTGTATTGTTTTAGTTGTCTAAAGGGTAATTTGTTCATG
TTAGTGTTGAGGAGTTTATTATGAGACATTCAATAATTTTGCTGGTATGT
CCGAAAAATATCCGAAATAATCAACACATGTAAACCACGGTATATTCGTA
GAGCGAGagcgaaaaataaagaatataaGGAAATCCGTATAGATGCCCTA
ACCCTTTATTAACCCGCACTTAGGTGATAAACATACAGCATCTTAGATTC
GACCTTGTGtaaataagtaagtaagtaagtatttatttaccttTTTAACA
CATCTGAAAATAATACAAGAGGCggaatcaacaaaataaaaaggaagGAG
ACCGCTTTATATAGCTAAGCTAATCAAaaaaagatgcggccacctaagtG
CCGAAAAAATTTAAGCAATAAAAACtagaataaatttttattttattttt
gctttcttGGTTGGGGAGGGGGTGTGCTCAGTATTCCCCAATACAGTGAG
TGAAGGCAAGAGATTTAATGAAATCATAATCAGATGAGCTCAAGGTTATA
TCAGGGTATGATCGCTGTAAACAATTCCATTGTGTTATGCAGATTTTAGT
AAATGATTTGTTACCAAAAGTTATAGTGTTAAAGGAAGGAACAAAAATAA
GTTTCAATTTTGCTCCTCTGGTACCATGATTATCATCACCATCAGCATCA
AGCTGAATGAAGTTAAAAGATTGCAGGAGATCGAAAGGTAATCTGTTGTT
CAAGAATTTGTgaacaaaagaaatattaagGCATCTGACAAGGTCgaaga
ttttgagaattttaagaTCTGAAAAAAGTGGAGAAGAAGGGCATTGAGAG
TTATTAAAGATCATGAGACGTAAGGCTTTCTTTTGAAGAATAAAGATAGG
TTTTGATGTAGTACTATCAGTGAGACCCCATAGTTGGCAACCATATTGTA
AATGAGAATGGAAAAGAGCCTGAAAGAGCATAGTATATATTAATAATggt
ttttgttgaaacataATGCCTGAGCTTCGATATTATACCATTGGCTCGTG
CAAGTTTTGATGACAGAAAGGTGGTGTGTGCTTTCCAGTTGAGGTGAGAG
TCAATCAACATANATTGTTGAAACATAGTGCCTGAGTTTTGATATAATAC
CATTGGCTCGTGCAAGTTTTGATGACAGAAAAGTGGTGTGAGCTTTCCAG
TTGAGGTGAGAGTCAATCAATATACCTAGATACTTGATATGAgagctttg
aaagattttcttaccTCCGATTTTAAGGAAAGGATTGAAAGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCA
AAGTTACCATCATCAAGAGAATTTCTGTGAACTTTGAATGGATAATTGCG
CGCGCAGCGCGTATCTCGTTTGGTAAAGTGCGCGCGATATACTAAATTGG
TCCCTATATggctaaacatttttgaaaaattcagtgttcgtgtatgacta
catgacacCAAATTCTCGTGTTTCCTCAGATCGCATCGCTTTCGAAACTA
AATCCTCATGTCGCAGCAAAAGAACTCCNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTCCCGCGCG
TTTATTTATTTGGACCGGTTGCTATTGCCTACcaacaaaaaactttctct
TCTTGCGTCTTGCCTTGCCAGCACATCAGCTTGCTGTGGATTGGATTGGA
TCAAAAGATGCAAACACTAAAATCgaatatttttgttcgaatctataacg
ttcgaattagattttcgaataaaaacattcgaaactacaagGCGGAAGTA
AAAGGGCGCTATCagtaaagcataaaaaagctgataatacgcagggaacg
aggttggtaaAAGGGCTGCTCCGCTCTCTCAGCGAGAGGTTCGAAAAAAT
TGACTCTTCGTTCATGGGACtcgcttttgaaaaaaatagcgaCCTGaatg
tagtctagcaagctagacgaccaatttatacatagtataaataaagcaaa
aagtaatgaagggaacaattttagtcgtctagaaacctttgtgcactaac
tccaaacaaaagaaaagtgtcaatattgcaattataatttgttcccgctc
aaaaaaaatcttgaaaaaaaaatgtgtgtgtgtattgaaagtttttcatt
tgagttgattttgttttgagagtttgttattcatgatattcatgacgtaa
tgttttctacggaaataccccggttttagccagtagtggcacttttaaac
tagacaaaagttgtataaaactttccactactggcaaaaactggggtctt
tccgtagaagaAAACATTACGCCATGAATACCATgaattgcttgataaat
tgttttctcgctacgcaagtttctgcgtagctagccggggtatctataag
gctggaacaccggattcttccagtcgtttatacaaactaaatctcGTATT
ATTATCattagtacacgttttttttatataaggaacacgtttataaggaa
ctcgaggctgaaatggtccaaaaaataaggaattgtttaggaactgctca
ggctgagaataagaaaacaagttttaaggaacagtaagagataGTTATCC
AAActtacaatcaaggtcataatatttgagaaaaaagggaaatccaccgg
gaagtttttgaaccacaatcgatttgtaagtgctctaaagtaggttggaa
gggtagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNaaaaagatagccaaaaatcgactttctcaccagaactttaaat
cttgaaaaacgttaaaataaccaaaattctcaatatattatgaccttaat
tgtAGCAGCTATCTAAATAAGgcactcgataaggaactttgaggcttaaa
ttctctgtaaaaataaggctcaggctcagagcaaagttaaggttccttat
aaaaaaaacgtgtattggtattattagtattacacgcattataaacgact
ccagtctaacctgaatgggactgaaatgtGTTTTTGCGGCAtttacctgg
gactcgtgaaggtgaaaaaaggtacccccgCTCCCTGGGCCGGTGCAATA
TATATACTCGATTTTcgggatttttttaaatttttagaattttggtattt
tggaatttctttttacattcccttTGGCCAATgtgtttttcagatatttt
ggaCTTTATAGAGCCCGAggctgttgtaaaattttcggcTGGGGATaaaa
aaaacaggtaaataaaagttttttcaactaGGAAAAATGTCGTCGCCTTA
ATTCTtataattttcgtcactttcccccgacatattTATCGAGAAAAGGC
ACTCTAGTTTTGTCTAACAGATTTCCCGGAAAAAGAATATCCAATTAAAA
AGCTGTTGTTTTCACCTTTCACTAGTGCTTCTCAAGACTCTACACTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
ATTATCCTGGATTACCTCAATATTATTTGCaacgcaaacagagtggagga
acgtacttaagcgttctggagcgcgcgtaacccctttttctaaacattga
ttTTTATCCCTATTTAAAATGCAATGGAAATCCACTgtggctgcgagaca
ggggtgttataatgTTAAATCAAAACGCcttgttaaatatttcctatcta
tataggaaatatttgttaaaacggtaaaatttcttctccttcttctcctt
ctccttctccaagtctaacgctcgcttttggtcaatttcgtgagtttgta
catgagtctctttttaaatcaagctccggcggtaaaaacagtatgatgtt
cttttttcgaggcggaagacgtcattctNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNacgtctg
tggtaaatatcggtacggcgctctattctccttgtcgatcgggcaacgtc
ggccgtttcagaagcgtattgttgatcggaccatactgctctgtttctaa
ctgtcaaaacaaagatggcagaaataggcaacaacttttgctctttcgct
acttttctttgcttgaattggatcatgatttttgtacgattgtcacaagg
aatggtcgatagtgaacttttcttaatattcctttNNNNNNNNACATAAA
GCGAGTTAgttaccgcgcgagttacgtcatacactccaccgcagcgcaca
acgaacggtgttttagtgaatatcaataattataagaatatcttctgtga
ttaaattcattaaactttgagtgctttaTTGAATATcaagaagataagaa
gataaaaaatgcgctggataattttcattgtaacagtttggtcaatcatt
gctgaaagtttgaaaaaaaatttccgacgcaaaaaaaaacttcaNtgttt
gtatatttacatgAATCGTACAAAGGCAAGGGACtttgaataaatctgac
catgttatacctgaaaaattactacttgcaatatgaaaaaagttttcacc
CAACGAATGCAGCGCAATGCCaacaatgcaacaatgggaatggttgatga
actgattttagctaaaaatttaaacatggagcaaaattgactggttaatg
attgaNgtaaaaaaagtgcgaaaagacacgaacgccattttttaatgagt
gttgttatgattttttagatcgcGGTCGCGTagaggaactcgccaaatgt
tcctaactgatgtatatacaattaaaatttttcttgaacttggagattct
cttccccgcgtgcattttaaaacgtggaaaactttagttgtgaatttaga
gatcttttgcaaNaatgaattaactgctggggttagtgacagttagtgaa
aactcgttgcggttataaatttcaaattttaaagctgataaccggatccg
gaacacACAAGGCCcaaatatgaagaatgttatgttatacttgtttaaaa
ggtttattgcattgaatatggatgtaaataatttgaaatcacctcacatC
ACACATgtacagttagggaaaccatccaggatcctgccattctataagcc
agcaaaaactaaatgccacttgtaaacttaagtttcttactattttccat
caNTGCATTCTGtcgtaaaatatgaaattgtttaaccctgttttgaaaga
tttttactttttagcacgtacattatttcaaaaaactccaaaagttactt
taattttttacattttttacaatattatatatatgatagtataatgcaaa
atatttcatctcattttgaaaatatataaaattttctttggttttcttac
tgtgaaatattctactttttgtcattctttcattttacatatttgccctt
tttggctatataatatttctggaaatcagcgcttaaaataataattatat
aatcaggtcttttgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNcattctttcattttacatatttgccctttttggctatataa
tatttctggaaatcagcgcttaaaataataattatataatcaggtctttt
gatgtgttcaacgcaacactctacttggcggtgcgacgccggttgaccgc
tagtataatactaaaatccatttaaagtacacctaacgaaaattaaagtt
ccagccaatttgattactgcattgttgttctcagtcgggttcagctcgta
tatattccgtgatccgtagctttgaacctacagtcatcttatgaataatc
ctgtaaatactctcaataacataaatggaattttgaaattcatagGGACT
Tgatgttgcttgatgttatctgagatttaaagcactttgaaatcttttga
gggcatcaattattattttaacatttgtaaaggaaatatttatccgcatc
tttgcggctcttgtttttaATTAGAAGTGTTTTCTCTTGTTCTAAAACCG
TTCTATGATCGCTCTTTGTTTACCAGACAAGTGTTCAAATCAGGGagttt
ttttaaaacattttcaacctAATGGTAATACagtattttaaattatttaa
ttattaATGTATATTGCTCAAATActgaaatctttaaaataaattgcTTG
TTCCCAATTTTGGAATCCTAATTTTTACCCGCAAGCAAGGTAGATTTCAG
ATCGATTGTCCCCCTCCCAGGAGTATGACTTTATCAGTCGATTTTACGGC
AACCCATATTGGCATTTCTGGTCTTGGAACGAAATTTAGATGGGTGTAAA
AAGGGGAGGAAAGCCACAAAGATTTCCTATTTTGGGCTCCCAATGAAAGA
GATCTTTTTACCCCTTAAAATTATCAAGAAATTCCATATAGTACAATGCT
TTAAGAATTCACAAAATTGCATAAAATCTAAATAAACTGGATCAGAAAAA
TGTTAACGAATAAACACAAAGGACAAAAtaaagtcgtttaaaaaaatcaa
atacaaaCTTTCCCATGAGTAAAAagtgaaattgaaaatatgaaattttg
acacGAAAAAATTCTTCTTGACTTATGAGTCTTTAACAGcctgaaaaatt
tcataaatgttACGCATTTTAATTTAAGAtagaagttttacagattttcg
attttgtcaagaatttttcacgAGCATTCACTTTTgcgaaaatcataaaa
tttcgcTAAAATAATGCTATATTAAAGGCCCCCTACAAACATATAGTTTG
TGGtaaattgactttttcaaaaactgcttcGGTAGAGTTTCTTGTCATTA
AAcgatatttattttgaaagtcttttttcCTAGGATTGTTGAAGGCTGGC
TTTGTTTTTTCAGTGTTGTCCCAAGAAACTTGATCGTCCATTCTTCATAC
AAAGTGTTTATTGATTTGGTTCTAGGATAATTGCCCCCCGGATAATTGCC
CCCGGGACAATTCCCCCCAGACAATTGCCCCCCCCGGACAATTGCCCCCA
GGACAATTGCCCCCCCCCAGACAATTCCCCCCTGGACAATTGCCCCCAGG
ACAATTGCCCCCCCCCAGACAATTCCCCCCTGGACAATTGCCCCCAGGAC
AATTGCCCCCCCCCAGACAATTCCCCCCTGGACAATTGCCCCCAGGACAA
TTGCCCCCCCCCAGACAATTCCCCCCTGGACAATTGCCCCCAGatgtcaa
aagtcaaaaaagatgTCAAAATTTATGGTGATCGAGTAACTCGATTTTAg
ccttaatgttcttataaaaaacctcatctttgaaatatcctgaatttttt
tgaagacctttttttaagtttcatgaatgaatgaatcaatcaataaatcg
cACCTGGGTTTTCTCGGAGCCAAGAATATTAAAGCGACAACATGAAAGAG
CGTCCCAGCATCGTCCCACCTGAGTGTTCCACCATCgccccacttgagcg
tcccacctgagcgtcccacctgagtgTCCCAGCATCGTCCCACCTGAACG
TCCCAGCATCATCCCACTtaagcgtcccacctgagccaccgtcccacgtc
ccaaagtctttataaaacggcgcgaatctgatttaccacatttgtggagc
aagaagcaaaagtcatcttttaaaagaacaaaaacattgcgtacgaagaa
aacgaaagtagcacagacagaaagaaagaaagaaagaaagaaagaaagac
aaaacgacatacagactagcgctattaatatatagatatctGTGATTGAT
AAGAGTTCACACTTTTACAaagtttgtcaatttttcttccAAATTATTCT
AATCTAACGCTTAAATTTATATTTCGTGATTAGAAAGGAGATGTGTTTCT
TATGCTGACAAGGCTTAattaacaatagaatttctcaaaaattgcgAGGA
GGGGagagtttaaaaaataatactttgGCAAGGAAATGGCGGCAGGAAAT
ACATTAAATTATGTTCTTTAagattctgaaaatttcatcgTTGGAAAGGC
CAAggataattttataaaaaaatattctaatcATTTACTGACATTATTCA
Acctaatcgtcagccgtgcaaaattactcgaatctgattggtttagagga
gtgcaattaatcgttaattgcactattaccacttNTTGAGATATTTTCCC
TTGTTTTACTCTCTTCAAATTTCTCTTGCTGGGAAGGTCAAGCTTTGCAA
ACTCTTTCTAATATACAAAAAAAATCGAGAGTAAAAGGATTTCATCCCGT
TTGTATAGACAACGCAGACAACGACAAacataatttgaaaataatacttT
ATATATCGCGGAGTTTTTATCATCTACTTGCCTTGTCGGATACAATAATT
TCTTTCAGAAATTAAACGTTCAACTTCTTCATTGAGTTGCTCAAAAAAGT
GATCATGAAACTGCTTCGACGTGAAATCTGTGCGCGGTGTTTGAATAACA
TCGTTATAGGTCATACTGGGATTGAATTTCTCTTTATCGACGACGTGAAT
TTTAACAGCTTTTGGCGTTTTGAGAGCTGTGAAGGCTGGGTTCGAGTTAT
CAATGGTGTCTGTTATAATAATGTTGATCATTTTATCATCAAAGACGGCA
TTCTTCAGTTGATTTGATTTTGGGGTTATTTCTAGCACTCTCACCAATTC
TCTCTTCGTGGGCATCAAATTAGTAATGGGAATCTTTAATGTAATGGTAT
CTTTACTACGCCTTTTCCATCCTATAGTAATACAACCTTTCCTTGTTCTA
TTATATAACATATAGATTGTTTCAGGCTCAGCTGGCTCAATATCATcaaa
attgaaagtttgaatATCATAATTAATATCTCCTTTTTTGTGGTTCACAA
CCCAGTTGTATGAATGATATATACCTCTATAAGGATTTTCCACACGAGTC
ACGTGGTGTATCTTCACGTTTAACGAAACACCAATCAACTGCAAAGTGTC
ATTTAAGCTCTCAATAAAATCAAACACTTTCCTAACGTCAATTCCATCTT
TGAAATCACTCAACACTCCTTCGGTGATTATAAAATTGATATTAAGTTGA
TTTTTCTCCAAACAAGTTGTATTTATCGGATTTTCTGTTATCCCTAGTTC
AGTTCCTTTGTAGTCAGGATTACGTAATATGTTTCTTACGTCATCGAATT
GTTCCATATGCCTGCCAAGATGGTACCACAAGTTTCGGCGCTGGGTTGAA
AGCCAAGTGAAGTTTGGAGCATACATGACCATTGACAATAGGATGATTGc
atattgttttttgttttgaagctTTGATAAAGCATCTGTTGTTTTATCGT
CGATTGAGTAGCCAGCGATATACAAAACAACATTACGCATTCCCTTAGTA
TTTCTTCTCAGCTCTTCCTCAAAGAATTTGTGAGAGCCAATAGGGTAGAC
AGGGTCCTTAATAGGATCCTTCACCTGAGGACGTTGCTGGATGAATTGGT
TAGGTTCGTCTAGATTAATCGTGATGAGGTCATTGTAATATTGATCAAGA
ACCTTTGGAACCAAATCTTTAGAATCTCGGACGTTCATTACTTTCTGTTC
CAGCTGATCataaaaacatatttcataACATTCATCAGTGTGGAATTCTC
TCAATAACATGTCAAAGAATTTAAGCCACTCATTTCTAGGATAAACTTCG
ACAGGATTAACATTGTCAGCACGGACCAACACTTTATACATTACGAGTGG
CTGCCAAACAACAATGATGCGAGTCTTGTCTAcacaaaatgaaaagtttt
ctgCAAGTGAAAAAGTGACATTTCTAATGATCAATAAAAGCACTGGTACT
ATTGCCAATGAAACTTTCATCTCGAACCGATTTTTCTATATGAACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033804XLOC_033804Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053559-exon-scaffold_233-1491911889:502748..503525TCONS_00053559-exon-scaffold_233-1491911889:502748..503525Clytia hemisphaericaexon
TCONS_00053559-exon-scaffold_233-1510915933:502748..503525TCONS_00053559-exon-scaffold_233-1510915933:502748..503525Clytia hemisphaericaexon
TCONS_00053559-exon-scaffold_233-1575043694:502748..503525TCONS_00053559-exon-scaffold_233-1575043694:502748..503525Clytia hemisphaericaexon
TCONS_00053559-exon-scaffold_233-1491911889:517429..517943TCONS_00053559-exon-scaffold_233-1491911889:517429..517943Clytia hemisphaericaexon
TCONS_00053559-exon-scaffold_233-1510915933:517429..517943TCONS_00053559-exon-scaffold_233-1510915933:517429..517943Clytia hemisphaericaexon
TCONS_00053559-exon-scaffold_233-1575043694:517429..517943TCONS_00053559-exon-scaffold_233-1575043694:517429..517943Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:502748..517943 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.06753	0.611718	0	0.133719	0.982651	0.459354	0.130396	0.0653679	0.098062	0.0814983	0	0.119127	0.975866	0.934857	0	0.143096	0	0	0.261698	1.61113	0	0	0.13879	0.336468	0	0	8.45818e-05	0	0	0.0156305
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053559 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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