TCONS_00053579 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053579
Unique NameTCONS_00053579
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1746

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053579 ID=TCONS_00053579|Name=TCONS_00053579|organism=Clytia hemisphaerica|type=transcript|length=1746bp
CATTTTCGTTGTTTTCGCAGAATGGAATCGAAATTTTGACAGTGTCTTTC
GGGTCATTATCGGATGTTGGATCTGTTGGGTTGTTTTTCTTGTCAGAAAA
TTGTTTGAAGACACTGTTGATAAACGGTACAGGAAAGTCGACTTTCTTGA
ACTTCTCCCCATGAATAATTTCTTTCTCTCTATGGAAATTGGAAGAGATT
CGGTAAGCACGACTTAGATCACTACGAATGGCAATGTAACTTGATTTTAC
TGACTTGTATTNTACTGGCACATAAAGGACATTTTCGAGAGGCTCGTGAT
ATATTCTCACAGGTCCGTGAAGCGACAGCGGAGGTGCCAGACATCTGGTT
GAACTTGGCACATGTTTATGTTGAACAACGACAGTTTGTCAGTGCCATAC
AAATGTACGAGAATTGCTTGAAAAAGTTTTACAAATCATACAACGTAGAA
GTGATGTTTTACTTGGCGAGAGCATATTATAAAGCAGGACGTTTGGAAGA
CTGTAAACGACTCTTGTTAAAGACGCGACATGTTGCACCACACAACACCT
TGCTCATGTTCAATTTATCACTCGTCCAACAACGTCTTGCAACCGGTGTG
TTGCGAAACGAAAAGAGTCTTTTGAAAGCTGTATTATCAGCTGTTGCTGA
CCTACAACTTGCTCAAAGAAATTTCGAGTATTTATCAAAACATGGTGATC
GGATGAGGTTTGATCTGGCTCAAGCAAGAAATGAAGCAGGGCGATGTTCC
GATTTGTTGAGTCAGGCACAGTACCACGTGCAAAGAGCTCGTCGCATCGA
TGAAGAAGAGAAAGAAACTCGCAAGAAACAAGAAGAAGAACGAGAATTAT
TCCGAAAGAAACACGACCAAGAACAGCAACGAATCAAAGAGAAAGTGGAG
GAAGATCGACAAAAAATGCTGGAAAAACGACAACAATTCaaagaacaaaa
taaacaaaaactcgtCTTCGATCCCGTCGAAATCGAACGAAAAGAAAGAG
CCAGATCGAAAAAGTCCAAGAAAGCGGAATTGGATGACTTTGTTAACGAC
GACTCATCGGATGATGATCGAcccaaaaagaaaaaGAAAGCTGTGGAATA
TGATGAAAACGGTGATCCTATAAAACCCAAACGACAACGTAAGACTAAAG
AGCCGAAAGAACGCAAACCCAAGAAATCAAAAGAGGCGAAGGAGCCAAAG
CTTTCAAAGAAACAACAGCAGAAAGTTAAATCCAAAGCTTTCCTCTCTTC
CGGTGATGACACTTCAAGTTCTGACAATAACGATGATGACAAACCAACCA
AGTCCACAGCTTCTTTCAAAGCTGCACTGGCTGCAAAAGACTCAGGCGAT
TCTTCTTCGTCGAACTCTGATGATGATGTGGATGTCAGTGATCAAAACAT
GAGCGTGGATGATCAATCTTCCTCGGGCGCTGAAGAGAAGCCCACCACCT
CCACCGCCACCTCCgtcaagaagaaaaaattggcCGCTATAATCGCTTCT
GATGAAGACTCGGAGGATGATATGAAGAACAACATCTTGGCCAGTAGTGG
TGGAAGTGATGCCGACGATGACGCGCCAAAAGTCACGAAAAAGAAACGAG
TTATTGCGTCTTCCGACTCTGAAGATGACGAGTAAATGCCATCGATATGT
CTTTGTCGCTCCACATTTTTATcgtatttctttcttttgtaatAGTAAAT
AAAGCAAGaatgtaaataaattttgatctttctaACTCGTTCTACG
Run BLAST on NCBI

protein sequence of TCONS_00053579-protein

>TCONS_00053579-protein ID=TCONS_00053579-protein|Name=TCONS_00053579-protein|organism=Clytia hemisphaerica|type=polypeptide|length=410bp
MYENCLKKFYKSYNVEVMFYLARAYYKAGRLEDCKRLLLKTRHVAPHNTL
LMFNLSLVQQRLATGVLRNEKSLLKAVLSAVADLQLAQRNFEYLSKHGDR
MRFDLAQARNEAGRCSDLLSQAQYHVQRARRIDEEEKETRKKQEEERELF
RKKHDQEQQRIKEKVEEDRQKMLEKRQQFKEQNKQKLVFDPVEIERKERA
RSKKSKKAELDDFVNDDSSDDDRPKKKKKAVEYDENGDPIKPKRQRKTKE
PKERKPKKSKEAKEPKLSKKQQQKVKSKAFLSSGDDTSSSDNNDDDKPTK
STASFKAALAAKDSGDSSSSNSDDDVDVSDQNMSVDDQSSSGAEEKPTTS
TATSVKKKKLAAIIASDEDSEDDMKNNILASSGGSDADDDAPKVTKKKRV
IASSDSEDDE
Run BLAST on NCBI

transcript from alignment at scaffold_233:768342..772814+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053579 ID=TCONS_00053579|Name=TCONS_00053579|organism=Clytia hemisphaerica|type=transcript|length=4473bp|location=Sequence derived from alignment at scaffold_233:768342..772814+ (Clytia hemisphaerica)
CATTTTCGTTGTTTTCGCAGAATGGAATCGAAATTTTGACAGTGTCTTTC
GGGTCATTATCGGATGTTGGATCTGTTGGGTTGTTTTTCTTGTCAGAAAA
TTGTTTGAAGACACTGTTGATAAACGGTACAGGAAAGTCGACTTTCTTGA
ACTTCTCCCCATGAATAATTTCTTTCTCTCTATGGAAATTGGAAGAGATT
CGGTAAGCACGACTTAGATCACTACGAATGGCAATGTAACTTGATTTTAC
TGACTTGTATTNTACTGGCACATAAAGGACATTTTCGAGAGGCTCGTGAT
ATATTCTCACAGGTAAGAACTTGATTTTACTGACTTGTATTAATTAGATT
AAGGTGACTGTTTTGCGATTCACTCATTTTACTGCAAGTGCATcggtgaa
attttttaaacagtATCCAGCCCATTGAACAATAAGAGAGGGAGATTTTA
AAAGACAAAGAGAGAAAGAGGTTAaaaatagaattaaaaaaaaaacaatt
ttaaccTCTTTCCCTCTTTgtcttttaaaatcttcaatGGGCTGGATACT
GAACTGTACATCCTATCTCTTTAAATCCACAATGGGCAAAGACTCTCACA
ACGAGAGTGACGCCCCTCAAACAACATAACATCTATCTATCCAATCGGTG
AAATTTTTTGTTGGTTGTTTCAcctacaaaattattttaataggATACGT
AgtaaaattttacaaaaccgACTAATTGCAGGTCCGTGAAGCGACAGCGG
AGGTGCCAGACATCTGGTTGAACTTGGCACATGTTTATGTTGAACAACGA
CAGTTTGTCAGTGCCATACAAATGGTGAGTATAAACCTCATTTTTAGAAA
TACCATAAAACTATTATATTAAGTAATTAGAGTTACCCTAACTTTCTGTT
TGTTTGAATGCGATGATTTTTGAAGGTTTGAGATACAGAGGGACTACAAA
GTGTTGTCAAGGATGACTGTATTTTTCAATCAATTCCCTGTCTTTTTACA
GTACGAGAATTGCTTGAAAAAGTTTTACAAATCATACAACGTAGAAGTGA
TGTTTTACTTGGCGAGAGCATATTATAAAGCAGGACGTTTGGAAGACTGT
AAACGACTCTTGTTAAAGGTAAGTGATTCACATTTCTTGGGTCCTAGAAA
GCGTATGCAACTTTTCTCATCACTTTCTATTTACAACTTAAACAATATTA
AttgtttgatattttcattaaaaacatgtTGAAGAGTGCGCATGTATCCT
TGTATCATACTCGCTGCAAAAGGTGatcaataaaatgatttttgtttCAG
ACGCGACATGTTGCACCACACAACACCTTGCTCATGTTCAATTTATCACT
CGTCCAACAACGTCTTGCAACCGGTGTGTTGCGAAACGAAAAGAGTCTTT
TGAAAGCTGTATTATCAGCTGTTGCTGACCTACAACTTGCTCAAAGGTAG
TCATTTTTTACAAAGGCTACAAGAAACACAAAGCTCATCATTTGAAGGTC
TTAGCTGTGAACTCCTATGAACCGTTGCCTCCTTGGCTTGAATTTTTGTA
CGACATAAACATAGAAATTTTGATGAGAGCCTTTCATTGAAGTTTCATTT
TCCTTAGATTTTATACGAACATCGGCAACAGTTTTACGTAAATTGACTCG
CTGATTTTCCTTTTCAGAAATTTCGAGTATTTATCAAAACATGGTGATCG
GATGAGGTTTGATCTGGCTCAAGCAAGAAATGAAGCAGGGTGAAAGAGAT
TTCCTAATTTTTACTTCTCTCATTGACTGGGTATTTTAATAAACGCAAAA
TATCTGAATAGCCGAGCACTGTCTGCTAGATAGTTTGATATCTCCATATG
TTATAATTCTTTCAGGCGATGTTCCGATTTGTTGAGTCAGGCACAGTACC
ACGTGCAAAGAGCTCGTCGCATCGATGAAGAAGAGAAAGAAACTCGCAAG
AAACAAGAAGAAGAACGAGAATTATTCCGAAAGAAACACGACCAAGAACA
GGTCAGCTACTGTATACTCTTTTCGATGCACTTTTTTCTCTTCCTCAGAT
TACGGCAGGAGTTTTGCTTGATGTATTATCATGTTGCGAAAAGTCATTGT
TATCTCCACGCATCTTGAAGTTACTTTATATatataaatgaataaatata
tTGTGCTTTTTAGTTTAAATGTGTGGCCCTGTTTTGGGCCCTTACCTTTT
CAATGATTTTATATGAGAGATCGGAAAGATGAGTAGTAGCAAGTTTCTGT
TATTTATACCAATAGCAAAAGTTAATAAAACATGAACGGAGAATTTGATA
TTTTACCAATAATAACCATTCTTCTTCTGCAGCAACGAATCAAAGAGAAA
GTGGAGGAAGATCGACAAAAAATGCTGGAAAAACGACAACAATTCaaaga
acaaaataaacaaaaactcgtCTTCGATCCCGTCGAAATCGAACGAAAAG
AAAGAGCCAGATCGAAAAAGGTACGTTCTTGCCTTTTTGTTAGGTTCGTT
AAGTATACCGGTTCCTAATTGAAGACGAAGGAAAACGTAATTGGCTTGTG
ACGAGTTTGAACCGTTCAAGTCTCGTATTTCCAATAGCTTATTACATTTT
CCTCTTTTGCGCATTAGCTACCGATAGCCTCTCTGTCTTCGTACTTCAAT
GCACAATTTGGAATGTGTTTTGATGACTCCTCTTAAACTTTGTGGGATTT
ACTGCTTTGTTTAGTTATGAACAGCTTCACCCTTTCCCTTGATGTGAAAA
TACACAAGGATTGCTTCATTCTCTTTTTATTATTGTCTTATGAAAAGTTC
TGCATTACATTGTTAACCATTTTGTTTCAGTCCAAGAAAGCGGAATTGGA
TGACTTTGTTAACGACGACTCATCGGATGATGATCGAcccaaaaagaaaa
agtaagccGTGCATTTTGGTCAGTTATCTTGTCCGGACGAGAGGGAAAAA
TTGAGTGGTCTTTAAACGAGCGTTTTCAAGACGCCCCAAGacctattttt
tttaaataatatttttctctcACATAGAACTTCTCTCGTTTAGTGTGGAT
CATCAGATAAAGAACTTAGTAGAACTTAGTACTTCTTTAATCCCCTCTCT
CTTATCTTCTTTTCAGGAAAGCTGTGGAATATGATGAAAACGGTGATCCT
ATAAAACCCAAACGGTAAGcttttttttctgttgttcGTTCAATCCGACA
ATATGAATGATGCGTGTCTTTTAACCTTTGTGTTATCTGAATGTAAACGT
TTTCTGTATATTTCCTACAACAGACAACGTAAGACTAAAGAGCCGAAAGA
ACGCAAACCCAAGAAATCAAAAGAGGCGAAGGAGCCAAAGCTTTCAAAGA
AACAACAGCAGAAAGTTAAATCCAAAGCTTTCCTCTCTTCCGGTGATGAC
ACTTCAAGTTCTGACAATAACGATGATGACAAACCAACCAAGTCCACAGC
TTCTTTCAAAGCTGCACTGTAAGCCAATCCTCGAATAAGTTTCCACTTTA
CAATCGTGAAAATCATATTCACTTTTAAGTATTTTGTAAATAGGAACTCG
ACAACTCCGAATTGTTATAACTTTGGTGACAGTTTTTCTAGTTAAACAGC
CCTATTccttccttattttttgggcgCTTACGATGTAAGGTAAGTTATCA
ATGAATGCTTTAAGAACGCACGGTAAATTATTTCAGGATTCACCGCTGAA
AACTGAAGTAAATGTTCTTACGCGAAAAAGTAGGTCGATAAGTGGGATAT
TTCAATGTACAATTCGAATTTCTTCAGGGCTGCAAAAGACTCAGGCGATT
CTTCTTCGTCGAACTCTGATGATGATGTGGATGTCAGTGATCAAAACATG
AGCGTGGATGATCAATCTTCCTCGGGCGCTGAAGAGAAGCCCACCACCTC
CACCGCCACCTCCgtcaagaagaaaaaattggcCGCTATAATCGCTTCTG
ATGAAGACTCGGAGGATGATATGAAGAACAACATCTTGGCCAGTAGTGGT
GGAAGTGATGCCGACGATGACGCGCCAAAAGTCACGAAAAAGAAACGAGT
TATTGCGTAAGTTATTCTGTTACTATAGCAACCCATCTTATGAATGCCTA
AGAATTCTATAAAATCAATTTACTAACGAAACAAAGAAGTAGCTTAAGCT
ATCTAGAGAATGTGTATCCATACTATGTAAACAAATGACTGAGAAAATCT
TTACAAAGACTGACCTTAGTTTAGAACGAAAGCCTTACGGTGCTTACTTC
AAGTGCGAATGAAAAGTTAGTGAAGTACACCGTTTCTTTATTGTAGACTG
GCATCTTCGTCAACttttccctttctttttttAGGTCTTCCGACTCTGAA
GATGACGAGTAAATGCCATCGATATGTCTTTGTCGCTCCACATTTTTATc
gtatttctttcttttgtaatAGTAAATAAAGCAAGaatgtaaataaattt
tgatctttctaACTCGTTCTACG

Coding sequence (CDS) from alignment at scaffold_233:768342..772814+

>TCONS_00053579 ID=TCONS_00053579|Name=TCONS_00053579|organism=Clytia hemisphaerica|type=CDS|length=13563bp|location=Sequence derived from alignment at scaffold_233:768342..772814+ (Clytia hemisphaerica)
ATGTACGAGAATTGCTTGAAAAAGTTTTACAAATCATACAACGTAGAAGT
GATGTTTTACTTGGCGAGAGCATATTATAAAGCAGGACGTTTGGAAGACT
GTAAACGACTCTTGTTAAAGACGCGACATGTTGCACCACACAACACCTTG
CTCATGTTCAATTTATCACTCGTCCAACAACGTCTTGCAACCGGTGTGTT
GCGAAACGAAAAGAGTCTTTTGAAAGCTGTATTATCAGCTGTTGCTGACC
TACAACTTGCTCAAAGAAATTTCGAGTATTTATCAAAACATGGTGATCGG
ATGAGGTTTGATCTGGCTCAAGCAAGAAATGAAGCAGGGCGATGTTCCGA
TTTGTTGAGTCAGGCACAGTACCACGTGCAAAGAGCTCGTCGCATCGATG
AAGAAGAGAAAGAAACTCGCAAGAAACAAGAAGAAGAACGAGAATTATTC
CGAAAGAAACACGACCAAGAACAGCAACGAATCAAAGAGAAAGTGGAGGA
AGATCGACAAAAAATGCTGGAAAAACGACAACAATTCaaagaacaaaata
aacaaaaactcgtCTTCGATCCCGTCGAAATCGAACGAAAAGAAAGAGCC
AGATCGAAAAAGTCCAAGAAAGCGGAATTGGATGACTTTGTTAACGACGA
CTCATCGGATGATGATCGAcccaaaaagaaaaaGAAAGCTGTGGAATATG
ATGAAAACGGTGATCCTATAAAACCCAAACGACAACGTAAGACTAAAGAG
CCGAAAGAACGCAAACCCAAGAAATCAAAAGAGGCGAAGGAGCCAAAGCT
TTCAAAGAAACAACAGCAGAAAGTTAAATCCAAAGCTTTCCTCTCTTCCG
GTGATGACACTTCAAGTTCTGACAATAACGATGATGACAAACCAACCAAG
TCCACAGCTTCTTTCAAAGCTGCACTGGCTGCAAAAGACTCAGGCGATTC
TTCTTCGTCGAACTCTGATGATGATGTGGATGTCAGTGATCAAAACATGA
GCGTGGATGATCAATCTTCCTCGGGCGCTGAAGAGAAGCCCACCACCTCC
ACCGCCACCTCCgtcaagaagaaaaaattggcCGCTATAATCGCTTCTGA
TGAAGACTCGGAGGATGATATGAAGAACAACATCTTGGCCAGTAGTGGTG
GAAGTGATGCCGACGATGACGCGCCAAAAGTCACGAAAAAGAAACGAGTT
ATTGCGTCTTCCGACTCTGAAGATGACGAGTAAATGTACGAGAATTGCTT
GAAAAAGTTTTACAAATCATACAACGTAGAAGTGATGTTTTACTTGGCGA
GAGCATATTATAAAGCAGGACGTTTGGAAGACTGTAAACGACTCTTGTTA
AAGACGCGACATGTTGCACCACACAACACCTTGCTCATGTTCAATTTATC
ACTCGTCCAACAACGTCTTGCAACCGGTGTGTTGCGAAACGAAAAGAGTC
TTTTGAAAGCTGTATTATCAGCTGTTGCTGACCTACAACTTGCTCAAAGA
AATTTCGAGTATTTATCAAAACATGGTGATCGGATGAGGTTTGATCTGGC
TCAAGCAAGAAATGAAGCAGGGCGATGTTCCGATTTGTTGAGTCAGGCAC
AGTACCACGTGCAAAGAGCTCGTCGCATCGATGAAGAAGAGAAAGAAACT
CGCAAGAAACAAGAAGAAGAACGAGAATTATTCCGAAAGAAACACGACCA
AGAACAGCAACGAATCAAAGAGAAAGTGGAGGAAGATCGACAAAAAATGC
TGGAAAAACGACAACAATTCaaagaacaaaataaacaaaaactcgtCTTC
GATCCCGTCGAAATCGAACGAAAAGAAAGAGCCAGATCGAAAAAGTCCAA
GAAAGCGGAATTGGATGACTTTGTTAACGACGACTCATCGGATGATGATC
GAcccaaaaagaaaaaGAAAGCTGTGGAATATGATGAAAACGGTGATCCT
ATAAAACCCAAACGACAACGTAAGACTAAAGAGCCGAAAGAACGCAAACC
CAAGAAATCAAAAGAGGCGAAGGAGCCAAAGCTTTCAAAGAAACAACAGC
AGAAAGTTAAATCCAAAGCTTTCCTCTCTTCCGGTGATGACACTTCAAGT
TCTGACAATAACGATGATGACAAACCAACCAAGTCCACAGCTTCTTTCAA
AGCTGCACTGGCTGCAAAAGACTCAGGCGATTCTTCTTCGTCGAACTCTG
ATGATGATGTGGATGTCAGTGATCAAAACATGAGCGTGGATGATCAATCT
TCCTCGGGCGCTGAAGAGAAGCCCACCACCTCCACCGCCACCTCCgtcaa
gaagaaaaaattggcCGCTATAATCGCTTCTGATGAAGACTCGGAGGATG
ATATGAAGAACAACATCTTGGCCAGTAGTGGTGGAAGTGATGCCGACGAT
GACGCGCCAAAAGTCACGAAAAAGAAACGAGTTATTGCGTCTTCCGACTC
TGAAGATGACGAGTAAATGTACGAGAATTGCTTGAAAAAGTTTTACAAAT
CATACAACGTAGAAGTGATGTTTTACTTGGCGAGAGCATATTATAAAGCA
GGACGTTTGGAAGACTGTAAACGACTCTTGTTAAAGACGCGACATGTTGC
ACCACACAACACCTTGCTCATGTTCAATTTATCACTCGTCCAACAACGTC
TTGCAACCGGTGTGTTGCGAAACGAAAAGAGTCTTTTGAAAGCTGTATTA
TCAGCTGTTGCTGACCTACAACTTGCTCAAAGAAATTTCGAGTATTTATC
AAAACATGGTGATCGGATGAGGTTTGATCTGGCTCAAGCAAGAAATGAAG
CAGGGCGATGTTCCGATTTGTTGAGTCAGGCACAGTACCACGTGCAAAGA
GCTCGTCGCATCGATGAAGAAGAGAAAGAAACTCGCAAGAAACAAGAAGA
AGAACGAGAATTATTCCGAAAGAAACACGACCAAGAACAGCAACGAATCA
AAGAGAAAGTGGAGGAAGATCGACAAAAAATGCTGGAAAAACGACAACAA
TTCaaagaacaaaataaacaaaaactcgtCTTCGATCCCGTCGAAATCGA
ACGAAAAGAAAGAGCCAGATCGAAAAAGTCCAAGAAAGCGGAATTGGATG
ACTTTGTTAACGACGACTCATCGGATGATGATCGAcccaaaaagaaaaaG
AAAGCTGTGGAATATGATGAAAACGGTGATCCTATAAAACCCAAACGACA
ACGTAAGACTAAAGAGCCGAAAGAACGCAAACCCAAGAAATCAAAAGAGG
CGAAGGAGCCAAAGCTTTCAAAGAAACAACAGCAGAAAGTTAAATCCAAA
GCTTTCCTCTCTTCCGGTGATGACACTTCAAGTTCTGACAATAACGATGA
TGACAAACCAACCAAGTCCACAGCTTCTTTCAAAGCTGCACTGGCTGCAA
AAGACTCAGGCGATTCTTCTTCGTCGAACTCTGATGATGATGTGGATGTC
AGTGATCAAAACATGAGCGTGGATGATCAATCTTCCTCGGGCGCTGAAGA
GAAGCCCACCACCTCCACCGCCACCTCCgtcaagaagaaaaaattggcCG
CTATAATCGCTTCTGATGAAGACTCGGAGGATGATATGAAGAACAACATC
TTGGCCAGTAGTGGTGGAAGTGATGCCGACGATGACGCGCCAAAAGTCAC
GAAAAAGAAACGAGTTATTGCGTCTTCCGACTCTGAAGATGACGAGTAAA
TGTACGAGAATTGCTTGAAAAAGTTTTACAAATCATACAACGTAGAAGTG
ATGTTTTACTTGGCGAGAGCATATTATAAAGCAGGACGTTTGGAAGACTG
TAAACGACTCTTGTTAAAGACGCGACATGTTGCACCACACAACACCTTGC
TCATGTTCAATTTATCACTCGTCCAACAACGTCTTGCAACCGGTGTGTTG
CGAAACGAAAAGAGTCTTTTGAAAGCTGTATTATCAGCTGTTGCTGACCT
ACAACTTGCTCAAAGAAATTTCGAGTATTTATCAAAACATGGTGATCGGA
TGAGGTTTGATCTGGCTCAAGCAAGAAATGAAGCAGGGCGATGTTCCGAT
TTGTTGAGTCAGGCACAGTACCACGTGCAAAGAGCTCGTCGCATCGATGA
AGAAGAGAAAGAAACTCGCAAGAAACAAGAAGAAGAACGAGAATTATTCC
GAAAGAAACACGACCAAGAACAGCAACGAATCAAAGAGAAAGTGGAGGAA
GATCGACAAAAAATGCTGGAAAAACGACAACAATTCaaagaacaaaataa
acaaaaactcgtCTTCGATCCCGTCGAAATCGAACGAAAAGAAAGAGCCA
GATCGAAAAAGTCCAAGAAAGCGGAATTGGATGACTTTGTTAACGACGAC
TCATCGGATGATGATCGAcccaaaaagaaaaaGAAAGCTGTGGAATATGA
TGAAAACGGTGATCCTATAAAACCCAAACGACAACGTAAGACTAAAGAGC
CGAAAGAACGCAAACCCAAGAAATCAAAAGAGGCGAAGGAGCCAAAGCTT
TCAAAGAAACAACAGCAGAAAGTTAAATCCAAAGCTTTCCTCTCTTCCGG
TGATGACACTTCAAGTTCTGACAATAACGATGATGACAAACCAACCAAGT
CCACAGCTTCTTTCAAAGCTGCACTGGCTGCAAAAGACTCAGGCGATTCT
TCTTCGTCGAACTCTGATGATGATGTGGATGTCAGTGATCAAAACATGAG
CGTGGATGATCAATCTTCCTCGGGCGCTGAAGAGAAGCCCACCACCTCCA
CCGCCACCTCCgtcaagaagaaaaaattggcCGCTATAATCGCTTCTGAT
GAAGACTCGGAGGATGATATGAAGAACAACATCTTGGCCAGTAGTGGTGG
AAGTGATGCCGACGATGACGCGCCAAAAGTCACGAAAAAGAAACGAGTTA
TTGCGTCTTCCGACTCTGAAGATGACGAGTAAATGTACGAGAATTGCTTG
AAAAAGTTTTACAAATCATACAACGTAGAAGTGATGTTTTACTTGGCGAG
AGCATATTATAAAGCAGGACGTTTGGAAGACTGTAAACGACTCTTGTTAA
AGACGCGACATGTTGCACCACACAACACCTTGCTCATGTTCAATTTATCA
CTCGTCCAACAACGTCTTGCAACCGGTGTGTTGCGAAACGAAAAGAGTCT
TTTGAAAGCTGTATTATCAGCTGTTGCTGACCTACAACTTGCTCAAAGAA
ATTTCGAGTATTTATCAAAACATGGTGATCGGATGAGGTTTGATCTGGCT
CAAGCAAGAAATGAAGCAGGGCGATGTTCCGATTTGTTGAGTCAGGCACA
GTACCACGTGCAAAGAGCTCGTCGCATCGATGAAGAAGAGAAAGAAACTC
GCAAGAAACAAGAAGAAGAACGAGAATTATTCCGAAAGAAACACGACCAA
GAACAGCAACGAATCAAAGAGAAAGTGGAGGAAGATCGACAAAAAATGCT
GGAAAAACGACAACAATTCaaagaacaaaataaacaaaaactcgtCTTCG
ATCCCGTCGAAATCGAACGAAAAGAAAGAGCCAGATCGAAAAAGTCCAAG
AAAGCGGAATTGGATGACTTTGTTAACGACGACTCATCGGATGATGATCG
AcccaaaaagaaaaaGAAAGCTGTGGAATATGATGAAAACGGTGATCCTA
TAAAACCCAAACGACAACGTAAGACTAAAGAGCCGAAAGAACGCAAACCC
AAGAAATCAAAAGAGGCGAAGGAGCCAAAGCTTTCAAAGAAACAACAGCA
GAAAGTTAAATCCAAAGCTTTCCTCTCTTCCGGTGATGACACTTCAAGTT
CTGACAATAACGATGATGACAAACCAACCAAGTCCACAGCTTCTTTCAAA
GCTGCACTGGCTGCAAAAGACTCAGGCGATTCTTCTTCGTCGAACTCTGA
TGATGATGTGGATGTCAGTGATCAAAACATGAGCGTGGATGATCAATCTT
CCTCGGGCGCTGAAGAGAAGCCCACCACCTCCACCGCCACCTCCgtcaag
aagaaaaaattggcCGCTATAATCGCTTCTGATGAAGACTCGGAGGATGA
TATGAAGAACAACATCTTGGCCAGTAGTGGTGGAAGTGATGCCGACGATG
ACGCGCCAAAAGTCACGAAAAAGAAACGAGTTATTGCGTCTTCCGACTCT
GAAGATGACGAGTAAATGTACGAGAATTGCTTGAAAAAGTTTTACAAATC
ATACAACGTAGAAGTGATGTTTTACTTGGCGAGAGCATATTATAAAGCAG
GACGTTTGGAAGACTGTAAACGACTCTTGTTAAAGACGCGACATGTTGCA
CCACACAACACCTTGCTCATGTTCAATTTATCACTCGTCCAACAACGTCT
TGCAACCGGTGTGTTGCGAAACGAAAAGAGTCTTTTGAAAGCTGTATTAT
CAGCTGTTGCTGACCTACAACTTGCTCAAAGAAATTTCGAGTATTTATCA
AAACATGGTGATCGGATGAGGTTTGATCTGGCTCAAGCAAGAAATGAAGC
AGGGCGATGTTCCGATTTGTTGAGTCAGGCACAGTACCACGTGCAAAGAG
CTCGTCGCATCGATGAAGAAGAGAAAGAAACTCGCAAGAAACAAGAAGAA
GAACGAGAATTATTCCGAAAGAAACACGACCAAGAACAGCAACGAATCAA
AGAGAAAGTGGAGGAAGATCGACAAAAAATGCTGGAAAAACGACAACAAT
TCaaagaacaaaataaacaaaaactcgtCTTCGATCCCGTCGAAATCGAA
CGAAAAGAAAGAGCCAGATCGAAAAAGTCCAAGAAAGCGGAATTGGATGA
CTTTGTTAACGACGACTCATCGGATGATGATCGAcccaaaaagaaaaaGA
AAGCTGTGGAATATGATGAAAACGGTGATCCTATAAAACCCAAACGACAA
CGTAAGACTAAAGAGCCGAAAGAACGCAAACCCAAGAAATCAAAAGAGGC
GAAGGAGCCAAAGCTTTCAAAGAAACAACAGCAGAAAGTTAAATCCAAAG
CTTTCCTCTCTTCCGGTGATGACACTTCAAGTTCTGACAATAACGATGAT
GACAAACCAACCAAGTCCACAGCTTCTTTCAAAGCTGCACTGGCTGCAAA
AGACTCAGGCGATTCTTCTTCGTCGAACTCTGATGATGATGTGGATGTCA
GTGATCAAAACATGAGCGTGGATGATCAATCTTCCTCGGGCGCTGAAGAG
AAGCCCACCACCTCCACCGCCACCTCCgtcaagaagaaaaaattggcCGC
TATAATCGCTTCTGATGAAGACTCGGAGGATGATATGAAGAACAACATCT
TGGCCAGTAGTGGTGGAAGTGATGCCGACGATGACGCGCCAAAAGTCACG
AAAAAGAAACGAGTTATTGCGTCTTCCGACTCTGAAGATGACGAGTAAAT
GTACGAGAATTGCTTGAAAAAGTTTTACAAATCATACAACGTAGAAGTGA
TGTTTTACTTGGCGAGAGCATATTATAAAGCAGGACGTTTGGAAGACTGT
AAACGACTCTTGTTAAAGACGCGACATGTTGCACCACACAACACCTTGCT
CATGTTCAATTTATCACTCGTCCAACAACGTCTTGCAACCGGTGTGTTGC
GAAACGAAAAGAGTCTTTTGAAAGCTGTATTATCAGCTGTTGCTGACCTA
CAACTTGCTCAAAGAAATTTCGAGTATTTATCAAAACATGGTGATCGGAT
GAGGTTTGATCTGGCTCAAGCAAGAAATGAAGCAGGGCGATGTTCCGATT
TGTTGAGTCAGGCACAGTACCACGTGCAAAGAGCTCGTCGCATCGATGAA
GAAGAGAAAGAAACTCGCAAGAAACAAGAAGAAGAACGAGAATTATTCCG
AAAGAAACACGACCAAGAACAGCAACGAATCAAAGAGAAAGTGGAGGAAG
ATCGACAAAAAATGCTGGAAAAACGACAACAATTCaaagaacaaaataaa
caaaaactcgtCTTCGATCCCGTCGAAATCGAACGAAAAGAAAGAGCCAG
ATCGAAAAAGTCCAAGAAAGCGGAATTGGATGACTTTGTTAACGACGACT
CATCGGATGATGATCGAcccaaaaagaaaaaGAAAGCTGTGGAATATGAT
GAAAACGGTGATCCTATAAAACCCAAACGACAACGTAAGACTAAAGAGCC
GAAAGAACGCAAACCCAAGAAATCAAAAGAGGCGAAGGAGCCAAAGCTTT
CAAAGAAACAACAGCAGAAAGTTAAATCCAAAGCTTTCCTCTCTTCCGGT
GATGACACTTCAAGTTCTGACAATAACGATGATGACAAACCAACCAAGTC
CACAGCTTCTTTCAAAGCTGCACTGGCTGCAAAAGACTCAGGCGATTCTT
CTTCGTCGAACTCTGATGATGATGTGGATGTCAGTGATCAAAACATGAGC
GTGGATGATCAATCTTCCTCGGGCGCTGAAGAGAAGCCCACCACCTCCAC
CGCCACCTCCgtcaagaagaaaaaattggcCGCTATAATCGCTTCTGATG
AAGACTCGGAGGATGATATGAAGAACAACATCTTGGCCAGTAGTGGTGGA
AGTGATGCCGACGATGACGCGCCAAAAGTCACGAAAAAGAAACGAGTTAT
TGCGTCTTCCGACTCTGAAGATGACGAGTAAATGTACGAGAATTGCTTGA
AAAAGTTTTACAAATCATACAACGTAGAAGTGATGTTTTACTTGGCGAGA
GCATATTATAAAGCAGGACGTTTGGAAGACTGTAAACGACTCTTGTTAAA
GACGCGACATGTTGCACCACACAACACCTTGCTCATGTTCAATTTATCAC
TCGTCCAACAACGTCTTGCAACCGGTGTGTTGCGAAACGAAAAGAGTCTT
TTGAAAGCTGTATTATCAGCTGTTGCTGACCTACAACTTGCTCAAAGAAA
TTTCGAGTATTTATCAAAACATGGTGATCGGATGAGGTTTGATCTGGCTC
AAGCAAGAAATGAAGCAGGGCGATGTTCCGATTTGTTGAGTCAGGCACAG
TACCACGTGCAAAGAGCTCGTCGCATCGATGAAGAAGAGAAAGAAACTCG
CAAGAAACAAGAAGAAGAACGAGAATTATTCCGAAAGAAACACGACCAAG
AACAGCAACGAATCAAAGAGAAAGTGGAGGAAGATCGACAAAAAATGCTG
GAAAAACGACAACAATTCaaagaacaaaataaacaaaaactcgtCTTCGA
TCCCGTCGAAATCGAACGAAAAGAAAGAGCCAGATCGAAAAAGTCCAAGA
AAGCGGAATTGGATGACTTTGTTAACGACGACTCATCGGATGATGATCGA
cccaaaaagaaaaaGAAAGCTGTGGAATATGATGAAAACGGTGATCCTAT
AAAACCCAAACGACAACGTAAGACTAAAGAGCCGAAAGAACGCAAACCCA
AGAAATCAAAAGAGGCGAAGGAGCCAAAGCTTTCAAAGAAACAACAGCAG
AAAGTTAAATCCAAAGCTTTCCTCTCTTCCGGTGATGACACTTCAAGTTC
TGACAATAACGATGATGACAAACCAACCAAGTCCACAGCTTCTTTCAAAG
CTGCACTGGCTGCAAAAGACTCAGGCGATTCTTCTTCGTCGAACTCTGAT
GATGATGTGGATGTCAGTGATCAAAACATGAGCGTGGATGATCAATCTTC
CTCGGGCGCTGAAGAGAAGCCCACCACCTCCACCGCCACCTCCgtcaaga
agaaaaaattggcCGCTATAATCGCTTCTGATGAAGACTCGGAGGATGAT
ATGAAGAACAACATCTTGGCCAGTAGTGGTGGAAGTGATGCCGACGATGA
CGCGCCAAAAGTCACGAAAAAGAAACGAGTTATTGCGTCTTCCGACTCTG
AAGATGACGAGTAAATGTACGAGAATTGCTTGAAAAAGTTTTACAAATCA
TACAACGTAGAAGTGATGTTTTACTTGGCGAGAGCATATTATAAAGCAGG
ACGTTTGGAAGACTGTAAACGACTCTTGTTAAAGACGCGACATGTTGCAC
CACACAACACCTTGCTCATGTTCAATTTATCACTCGTCCAACAACGTCTT
GCAACCGGTGTGTTGCGAAACGAAAAGAGTCTTTTGAAAGCTGTATTATC
AGCTGTTGCTGACCTACAACTTGCTCAAAGAAATTTCGAGTATTTATCAA
AACATGGTGATCGGATGAGGTTTGATCTGGCTCAAGCAAGAAATGAAGCA
GGGCGATGTTCCGATTTGTTGAGTCAGGCACAGTACCACGTGCAAAGAGC
TCGTCGCATCGATGAAGAAGAGAAAGAAACTCGCAAGAAACAAGAAGAAG
AACGAGAATTATTCCGAAAGAAACACGACCAAGAACAGCAACGAATCAAA
GAGAAAGTGGAGGAAGATCGACAAAAAATGCTGGAAAAACGACAACAATT
CaaagaacaaaataaacaaaaactcgtCTTCGATCCCGTCGAAATCGAAC
GAAAAGAAAGAGCCAGATCGAAAAAGTCCAAGAAAGCGGAATTGGATGAC
TTTGTTAACGACGACTCATCGGATGATGATCGAcccaaaaagaaaaaGAA
AGCTGTGGAATATGATGAAAACGGTGATCCTATAAAACCCAAACGACAAC
GTAAGACTAAAGAGCCGAAAGAACGCAAACCCAAGAAATCAAAAGAGGCG
AAGGAGCCAAAGCTTTCAAAGAAACAACAGCAGAAAGTTAAATCCAAAGC
TTTCCTCTCTTCCGGTGATGACACTTCAAGTTCTGACAATAACGATGATG
ACAAACCAACCAAGTCCACAGCTTCTTTCAAAGCTGCACTGGCTGCAAAA
GACTCAGGCGATTCTTCTTCGTCGAACTCTGATGATGATGTGGATGTCAG
TGATCAAAACATGAGCGTGGATGATCAATCTTCCTCGGGCGCTGAAGAGA
AGCCCACCACCTCCACCGCCACCTCCgtcaagaagaaaaaattggcCGCT
ATAATCGCTTCTGATGAAGACTCGGAGGATGATATGAAGAACAACATCTT
GGCCAGTAGTGGTGGAAGTGATGCCGACGATGACGCGCCAAAAGTCACGA
AAAAGAAACGAGTTATTGCGTCTTCCGACTCTGAAGATGACGAGTAAATG
TACGAGAATTGCTTGAAAAAGTTTTACAAATCATACAACGTAGAAGTGAT
GTTTTACTTGGCGAGAGCATATTATAAAGCAGGACGTTTGGAAGACTGTA
AACGACTCTTGTTAAAGACGCGACATGTTGCACCACACAACACCTTGCTC
ATGTTCAATTTATCACTCGTCCAACAACGTCTTGCAACCGGTGTGTTGCG
AAACGAAAAGAGTCTTTTGAAAGCTGTATTATCAGCTGTTGCTGACCTAC
AACTTGCTCAAAGAAATTTCGAGTATTTATCAAAACATGGTGATCGGATG
AGGTTTGATCTGGCTCAAGCAAGAAATGAAGCAGGGCGATGTTCCGATTT
GTTGAGTCAGGCACAGTACCACGTGCAAAGAGCTCGTCGCATCGATGAAG
AAGAGAAAGAAACTCGCAAGAAACAAGAAGAAGAACGAGAATTATTCCGA
AAGAAACACGACCAAGAACAGCAACGAATCAAAGAGAAAGTGGAGGAAGA
TCGACAAAAAATGCTGGAAAAACGACAACAATTCaaagaacaaaataaac
aaaaactcgtCTTCGATCCCGTCGAAATCGAACGAAAAGAAAGAGCCAGA
TCGAAAAAGTCCAAGAAAGCGGAATTGGATGACTTTGTTAACGACGACTC
ATCGGATGATGATCGAcccaaaaagaaaaaGAAAGCTGTGGAATATGATG
AAAACGGTGATCCTATAAAACCCAAACGACAACGTAAGACTAAAGAGCCG
AAAGAACGCAAACCCAAGAAATCAAAAGAGGCGAAGGAGCCAAAGCTTTC
AAAGAAACAACAGCAGAAAGTTAAATCCAAAGCTTTCCTCTCTTCCGGTG
ATGACACTTCAAGTTCTGACAATAACGATGATGACAAACCAACCAAGTCC
ACAGCTTCTTTCAAAGCTGCACTGGCTGCAAAAGACTCAGGCGATTCTTC
TTCGTCGAACTCTGATGATGATGTGGATGTCAGTGATCAAAACATGAGCG
TGGATGATCAATCTTCCTCGGGCGCTGAAGAGAAGCCCACCACCTCCACC
GCCACCTCCgtcaagaagaaaaaattggcCGCTATAATCGCTTCTGATGA
AGACTCGGAGGATGATATGAAGAACAACATCTTGGCCAGTAGTGGTGGAA
GTGATGCCGACGATGACGCGCCAAAAGTCACGAAAAAGAAACGAGTTATT
GCGTCTTCCGACTCTGAAGATGACGAGTAAATGTACGAGAATTGCTTGAA
AAAGTTTTACAAATCATACAACGTAGAAGTGATGTTTTACTTGGCGAGAG
CATATTATAAAGCAGGACGTTTGGAAGACTGTAAACGACTCTTGTTAAAG
ACGCGACATGTTGCACCACACAACACCTTGCTCATGTTCAATTTATCACT
CGTCCAACAACGTCTTGCAACCGGTGTGTTGCGAAACGAAAAGAGTCTTT
TGAAAGCTGTATTATCAGCTGTTGCTGACCTACAACTTGCTCAAAGAAAT
TTCGAGTATTTATCAAAACATGGTGATCGGATGAGGTTTGATCTGGCTCA
AGCAAGAAATGAAGCAGGGCGATGTTCCGATTTGTTGAGTCAGGCACAGT
ACCACGTGCAAAGAGCTCGTCGCATCGATGAAGAAGAGAAAGAAACTCGC
AAGAAACAAGAAGAAGAACGAGAATTATTCCGAAAGAAACACGACCAAGA
ACAGCAACGAATCAAAGAGAAAGTGGAGGAAGATCGACAAAAAATGCTGG
AAAAACGACAACAATTCaaagaacaaaataaacaaaaactcgtCTTCGAT
CCCGTCGAAATCGAACGAAAAGAAAGAGCCAGATCGAAAAAGTCCAAGAA
AGCGGAATTGGATGACTTTGTTAACGACGACTCATCGGATGATGATCGAc
ccaaaaagaaaaaGAAAGCTGTGGAATATGATGAAAACGGTGATCCTATA
AAACCCAAACGACAACGTAAGACTAAAGAGCCGAAAGAACGCAAACCCAA
GAAATCAAAAGAGGCGAAGGAGCCAAAGCTTTCAAAGAAACAACAGCAGA
AAGTTAAATCCAAAGCTTTCCTCTCTTCCGGTGATGACACTTCAAGTTCT
GACAATAACGATGATGACAAACCAACCAAGTCCACAGCTTCTTTCAAAGC
TGCACTGGCTGCAAAAGACTCAGGCGATTCTTCTTCGTCGAACTCTGATG
ATGATGTGGATGTCAGTGATCAAAACATGAGCGTGGATGATCAATCTTCC
TCGGGCGCTGAAGAGAAGCCCACCACCTCCACCGCCACCTCCgtcaagaa
gaaaaaattggcCGCTATAATCGCTTCTGATGAAGACTCGGAGGATGATA
TGAAGAACAACATCTTGGCCAGTAGTGGTGGAAGTGATGCCGACGATGAC
GCGCCAAAAGTCACGAAAAAGAAACGAGTTATTGCGTCTTCCGACTCTGA
AGATGACGAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033812XLOC_033812Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053579-proteinTCONS_00053579-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053579-exon-scaffold_233-1491911889:768342..768653TCONS_00053579-exon-scaffold_233-1491911889:768342..768653Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1510915933:768342..768653TCONS_00053579-exon-scaffold_233-1510915933:768342..768653Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1575043694:768342..768653TCONS_00053579-exon-scaffold_233-1575043694:768342..768653Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1491911889:769073..769165TCONS_00053579-exon-scaffold_233-1491911889:769073..769165Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1510915933:769073..769165TCONS_00053579-exon-scaffold_233-1510915933:769073..769165Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1575043694:769073..769165TCONS_00053579-exon-scaffold_233-1575043694:769073..769165Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1491911889:769343..769459TCONS_00053579-exon-scaffold_233-1491911889:769343..769459Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1510915933:769343..769459TCONS_00053579-exon-scaffold_233-1510915933:769343..769459Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1575043694:769343..769459TCONS_00053579-exon-scaffold_233-1575043694:769343..769459Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1491911889:769642..769787TCONS_00053579-exon-scaffold_233-1491911889:769642..769787Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1510915933:769642..769787TCONS_00053579-exon-scaffold_233-1510915933:769642..769787Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1575043694:769642..769787TCONS_00053579-exon-scaffold_233-1575043694:769642..769787Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1491911889:770009..770080TCONS_00053579-exon-scaffold_233-1491911889:770009..770080Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1510915933:770009..770080TCONS_00053579-exon-scaffold_233-1510915933:770009..770080Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1575043694:770009..770080TCONS_00053579-exon-scaffold_233-1575043694:770009..770080Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1491911889:770207..770342TCONS_00053579-exon-scaffold_233-1491911889:770207..770342Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1510915933:770207..770342TCONS_00053579-exon-scaffold_233-1510915933:770207..770342Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1575043694:770207..770342TCONS_00053579-exon-scaffold_233-1575043694:770207..770342Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1491911889:770674..770811TCONS_00053579-exon-scaffold_233-1491911889:770674..770811Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1510915933:770674..770811TCONS_00053579-exon-scaffold_233-1510915933:770674..770811Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1575043694:770674..770811TCONS_00053579-exon-scaffold_233-1575043694:770674..770811Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1491911889:771172..771242TCONS_00053579-exon-scaffold_233-1491911889:771172..771242Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1510915933:771172..771242TCONS_00053579-exon-scaffold_233-1510915933:771172..771242Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1575043694:771172..771242TCONS_00053579-exon-scaffold_233-1575043694:771172..771242Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1491911889:771458..771505TCONS_00053579-exon-scaffold_233-1491911889:771458..771505Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1510915933:771458..771505TCONS_00053579-exon-scaffold_233-1510915933:771458..771505Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1575043694:771458..771505TCONS_00053579-exon-scaffold_233-1575043694:771458..771505Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1491911889:771615..771809TCONS_00053579-exon-scaffold_233-1491911889:771615..771809Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1510915933:771615..771809TCONS_00053579-exon-scaffold_233-1510915933:771615..771809Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1575043694:771615..771809TCONS_00053579-exon-scaffold_233-1575043694:771615..771809Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1491911889:772119..772397TCONS_00053579-exon-scaffold_233-1491911889:772119..772397Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1510915933:772119..772397TCONS_00053579-exon-scaffold_233-1510915933:772119..772397Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1575043694:772119..772397TCONS_00053579-exon-scaffold_233-1575043694:772119..772397Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1491911889:772676..772814TCONS_00053579-exon-scaffold_233-1491911889:772676..772814Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1510915933:772676..772814TCONS_00053579-exon-scaffold_233-1510915933:772676..772814Clytia hemisphaericaexon
TCONS_00053579-exon-scaffold_233-1575043694:772676..772814TCONS_00053579-exon-scaffold_233-1575043694:772676..772814Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:768342..772814 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
56.1589	50.296	99.8777	106.554	72.2009	55.7702	47.8753	56.2594	40.1356	40.1682	50.1807	47.7294	49.3067	64.9288	50.1582	65.401	42.5634	55.2397	33.2072	30.1376	47.5125	46.3702	65.5272	64.843	55.305	56.3519	31.1712	39.7352	47.0541	50.2499
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00053579 vs. Swiss-Prot (Human)
Match: CTR9 (RNA polymerase-associated protein CTR9 homolog OS=Homo sapiens GN=CTR9 PE=1 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 6.158e-82
Identity = 149/235 (63.40%), Postives = 196/235 (83.40%), Query Frame = 1 
Query:  265 LAHKGHFREARDIFSQVREATAEVPDIWLNLAHVYVEQRQFVSAIQMYENCLKKFYKSYNVEVMFYLARAYYKAGRLEDCKRLLLKTRHVAPHNTLLMFNLSLVQQRLATGVLRNEKSLLKAVLSAVADLQLAQRNFEYLSKHGDRMRFDLAQARNEAGRCSDLLSQAQYHVQRARRIDXXXXXXXXXXXXXXXLFRKKHDQEQQRIKEKVEEDRQKMLEKRQQFKEQNKQKLVF 969
            LAHKG+FREARD+F+QVREATA++ D+WLNLAH+YVEQ+Q++SA+QMYENCL+KFYK  N EV+ YLARA +K G+L++CK+ LLK RHVAP +T+LMFN++LV QRLAT VL++EKS LK VL+AV +L+LA R F YLSK GD+MRFDLA A  EA +CSDLLSQAQYHV RAR+ DEEE+E R KQE+E+EL R+K  +EQ+  + + +E+++K+LE+R Q+ E+ K  L+F
Sbjct:  657 LAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMF 891
The following BLAST results are available for this feature:
BLAST of TCONS_00053579 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTR96.158e-8263.40RNA polymerase-associated protein CTR9 homolog OS=... [more]
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