TCONS_00053587 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053587
Unique NameTCONS_00053587
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1390

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053587 ID=TCONS_00053587|Name=TCONS_00053587|organism=Clytia hemisphaerica|type=transcript|length=1390bp
AAACCATCAGTGGAGAAAGTGGAAGGACCTTATCCATTCATGGCGCAACG
AGATGATGGTACTGAATGTCCAGTCGTCCAAGATTTCACCTACGGAAAAT
ATTTGGGTAATTTGAAGTTGACTTTCGATGAAAATGGTAAATTGTTATCA
GCTCAAGGAAATCCCATCATGTTGAATGTTTCTTATGCTGAAGATGAGGA
AGTTTTAAAAATGGTGGATGAAATGGACGACCCTATCATCAAAGCAAGAA
TGGATCCCATTGGTCGTTCATATGTCCGTTTAGAAGGCGATCGCTCCATT
TGTCGTTTGAAGGAGTGCAACCTGGGAAATTTCTTCGCAGATGCTTTGGT
TGACGCCCAAGTGAAAAATCCTTCCACAGAACAATGGGCTGAAACTGTTC
TCGCTATTTGGAATGGTGGTGGTATCAGATCTGGAAATATTGATAGGAGT
TTTGATGCGGATATAAGCCGTGAGGAACTAAACACGATTAGTCCTTTTGG
AAATACAGCAGATGTCATGGAAATCAAAGGCAAATATCTACTTCAAGCAT
TTGAACATGGATTTTCTGGTATTGAAAACAACGAAGGACGATATCCCCAA
GTATCAGgaTTTCGTGTCACCTACGATAAGACGAAGCCAGTTGGAAGTCG
CTTGATCAGAGTTTTAGCTTTATGTAACAAATGTCGCGTTCCTAAATACg
aagaaatcaaagaagaacaaatctataagGTCGTTTCTTCGGATTATTTG
ATCAGTGGAGGTGATGGATACAGTATGTTTCTGAACAAAGAGAGTTCCAC
TAAAGGTGAAGATGCACTGGAAGTGTTGGAGAAGTACTTCCAAAAGATGT
CGCCAGTCACCACCCCTGATGAAGGGCGGACAATTGAAGTCAGCACCAGC
AAGGATTACACCAAGACAGACGACGATTGTTCATCTGCATCCTTCATCTC
GTTCAACCCTATCTTCATTGTTGTCGTTTTGTTCATATCCTACTTTATTT
AGTGAATGAAGTATTCGGTCcttcaatattgaaatcatatgTAATACTTT
AAAtgtaatattttaaacaaacttGTGGATACTGTTCCTCTCCTAGATTC
TCATGAAGCTATCTTTGAGCACACACCATGTGACAGACCCGGTggcactg
gaaaattgactttggtgtCATCCCCATCTGAAATTCCATTGATAATAtcg
cactccaaaaccatccatTCATTCTGGAGTTTTTAAGCTTGAAGCGAatg
aatttctatccccattgtaAATTTGATCGAAATTATATCGCGATGAGCTC
CACTGGGAGCACTGAGATAGAGATGTTTTAGTTATCGTCTCCATTTTACT
TGGAAGAAATTTATGTAAAATGTATGTCTATATATTGAGT
Run BLAST on NCBI

transcript from alignment at scaffold_233:887521..907058+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053587 ID=TCONS_00053587|Name=TCONS_00053587|organism=Clytia hemisphaerica|type=transcript|length=19538bp|location=Sequence derived from alignment at scaffold_233:887521..907058+ (Clytia hemisphaerica)
AAACCATCAGTGGAGAAAGTGGAAGGACCTTATCCATTCATGGCGCAACG AGATGATGGTACTGAATGTCCAGTCGTCCAAGATTTCACCTACGGAAAAT ATTTGGGTAATTTGAAGTTGACTTTCGATGAAAATGGTAAATTGTTATCA GCTCAAGGAAATCCCATCATGTTGAATGTTTCTTATGCTGAAGATGAGGA AGTTTTAAAAATGGTGGATGAAATGGACGACCCTATCATCAAAGCAAGAA TGGTAATTGTTTTAAGATAAGCTTTAGAAACGCAAAGAACAGGCTTTTAG AATCTgccaacttaaaaaaaaaatcctcaaaTCTAGATTCATATTTAAAG TTTCCTTGTGAttatgaaactaattttctttatttattatcaaaataaaa ccaaataCACCCTCGTCCACGCCTTACAGGTTAAGGAGATTCATACCCCT TAATACATCTTTTTTTATTAAGGATCCCATTGGTCGTTCATATGTCCGTT TAGAAGGCGATCGCTCCATTTGTCGTTTGAAGGAGTGCAACCTGGGAAAT TTCTTCGCAGATGCTTTGGTTGACGCCCAAGTGAAAAATCCTTCCACAGA ACAATGGGCTGAAACTGTTCTCGCTATTTGGAATGGTGGTGGTATCAGAT CTGGAAATATTGATAGGAGTTTTGATGGTATGGATAACTTCTTGATGATT TGATGCTCGATTTTTGACTTAACTTTCATTTAACTTCTTTATTCCTTGTA TGTAAGATGAAACCACTCGTTTTGAAATTAgggaaaattttaataatttt tgagaattctaaatttcaaattttggtatTTATTCTGTACTTAAACTTTA CGTAATCAAAAAGAAACGAGAAGGATTTGAGCTTACCTTGCTTTTATTTC ATCATTTAAGCGGATATAAGCCGTGAGGAACTAAACACGATTAGTCCTTT TGGAAATACAGCAGATGTCATGGAAATCAAAGGCAAATATCTACTTCAAG CATTTGAACATGGATTCTCGGGTATCGACACCAAAGAAGGGCGGTTCCCA CAAGTATCAGGTTTGTTTTCTACACCCTCTTGTGTCAAATTTTCAGATCG TACttcgtttgaatttttttttgtaagggccGAAATGGCCTGCCTAAATG GTGAATATCATAGAGTCTTGCaccttttaattttcaaaaattaacttgtt tgttcttttttttaggATTTCGTATACTGTACGATAAGACGAAGCCAGTT GGAAGACGCTTGGTTAGAGCTTTAGCTTTATGTAACAAATGTCGTGTTCC CAAATACgaagaaatcaaagaagaaCAAATTTACAAGGTGTGTATTTGCA TAACCTAAATGGtttctaataaaagaaatttaGATCATTTGAGAAACTTT GATCTACGCAAAACGAATTTAAATGTGTGTGGTTTCTAACAATATTCTAG CAAAAGTAATTGGTTTCGAATATAGAAGTCCTAAAATATAACTTATGAAT TataattagaaatatttcgTATTTTGATCTAGATTCGAGTATCTACTGTA AACGATTTGTGTTCAAATATGAATTTTAGTCGGTAAAAAACATAAGTCAA ATTTTCCACATCAAAACACTATGTTCCTCTCATAAGTTACCCTGGGAATC CAatctcataatcttagaaaaaacaaaaaataactcgcctgcagggagat ttttccctgcaatgcagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNcgcgaaagtactgctaagtaat acgccgaaagctggccaatcaggccgaacctgcattgcagggaaaaatct ccctgcaggcgagttacctgcgccaagcctTAAACAAGCtctaaaaatat cataaactagactgtgaaaaaagtttaacactTGGATTTCCAGGCTANat aatttatggaaaaagctgactctgcagaaaaaaggaaaacaaatgaaaat gaaaacatagattcatttagaaacaaaatggctgttggctcaTCTTGGTT CATCtcacaaagttttaaaattatagagcttggtgcaggtagattagNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGGACAATAAAATGTGAC GTCATAGAAAATTACAAAAGCCTCGAGGGACGTATAATAAAGATAACTAT CCTCCAAATGATGCTGGTGATTAAGGAATTGTTTACATCTACTTTCTTAA TAGTTGGTGACATCGAGCTACCTGGCGGACGGAGGGGACGGTTACACCAT GCTGAAGAAGAACGAAGGCCTCGTCAAAGGTGAAGATGCTTTAAACGCCC TCGACGCCTACTTTTAGCAAGATGTCGCCTGTCACCGCTAAAATTGAAGG GCGGGTCATCGATATATCTACTGGTGATTTGTATAGACATTCTTCGTCAA GTGCGTTGCGTTCAGGATCGATCAATGGCATGGTATTCTTTCTTTGTTTG GTGTTTTGTCTGTTAAGATtataacagattttttgaatgtttgtttTGAG GTAAGTAATGAGAAGTTCTCAGGAAAAGAAAATGGTAGACTTTGCTACGG TACATTTGATCTGAGCTTGAGTGGTAGATCTAAAATGGAAGACATATATT GTATCATCAATGATTGACGATGGGTATCTGGTTGCCATACGAGCTCAAAA TCTGTTTGTGACTTTTTGATGAATAGCACCATATATCGCTACTTTCACGC TGCTTCTTAATAAGATGAAAGAGGGATTTTAAGTATTATGAATATAAACA GcgtaacaaaatattttctgtcTTGTTTGAATTATGTAACTTAAGGCGAG TCCTTCGAAAAGTCCAAACCTTTTAAAGGtctgtttccatcgatcgcgcg agcgtgTACCCTAGgccaaaatttcctaaaatagattttctgatggaaat caaacattgatcgcgcggagtgtgcggccaaatctattttaagaattttg gccTAGCGTGCACGGTCCCGCGATCGATTGAAACAGGCCCTAATGAAATT GATGTTTAATTAACCCTTTAaatgccaatgtcgtatatatcagacatggc ctatgtaggagggcgaagccctgccctcctgtaatgcccagtttgagtta gaaatcgtcatttttggtccaactcgtaggaattggattgggcttcatgg tcaagcaaaaagcaatcaaaagggagtctttccagcgagattttagtaaa aacaaatgcaaaaatttgacaaaaatccacttttttcagattttgaccgt ttttgaccatttttagtcaacgagtgatccaataACCTCTaaatttggcc ctgctttacttgattctgttctccagcgaattaatttgaagttttaccac tgggaacctttctatcattcaggcaggtcctcGCAGCGGGCTATGAacaa gcttctaactccttctagatccggagatataagctgaaaagggccaaaat tcgcgagaatcgcgaaagtttctgctcgcgaaagtttgtacgcctaaagt aaacTCGGTGAAACTCCAACTAACTTTGCTTTTTCACTTAAATAAATTTC CTTTTTGCGAGGAATAAGGAATAAGATCAGGCCTTGGAATAAGATTCAAT ATCACTTATGGTTTCCCGCAAAGTAAGCAAAAGAGAATTCGACCCAGTTC ATCatttataattttgattttgataaaattttaattaaatttatgatttt tttttcattttgaatatttgaaaataaattatggGTACAGAAAAGGATAT TTTGAATTGCATAATTTGCTGTTTAGGAGTTATATGAAGCTTATATAACG CTATTAAGATGATAATCAATTGGACTGTACACATCATCGCGCTACCTTTA CATTCATTAATCGATATCCACTGTGTGttaataattgataaaatcaaaac tgctcatttttttttttaatctaaccTGTATACAATATATAGCACCTTGC CAAATTTACGTAACTTTTGCAAATAAATTAGAACATTTTGTGTAAAAAGC TCTCATTTGCAAAATCATTTTTCTCGTTTCAAGATATTAGAAGAAGAATA TTAACTAGATATCACTTTGGTGAGTTTGATGTTGAGATATTGGGTGCTAA TATGGTCAATTTTGTCTCTCTATGTTATCTCGTGGCTTTTATAGCACTTG GAAAAACCTCCNTCAATCTTGTCTCTCTATGTTATCTCGTGGCTTTTATA GCACTTGGAGAAACCTCTAAACCGAATCAATGGCATGGTGTCTTTTGGGA AGTAGAACCCTACATCAAATACAACTCATCGCTGGGGATTTACGAAGGAA TCTTTCCTACcattttcttgaaagcaatAAGCTACTGTAACATCTCACAG AATCGTATCTTATCCTATGACGTTAGCCTTAAATCGAGAAATGAATTCCA AAAGACGCTTGAATCAAAAACACTTAAAGGGGATGGAATTCTCGCTAACA TTTCCAGTTCCAATGCTGCAGCATGGTTTCCACACGATGTAGACAAAATC AAGAAAGGGCCGTTCGCTTTTCTGAGGAGAAATTTGACAGTCATGGTTGG TGTTTCAAGTGAGGGTTTAGCTGTAATTCAACCAAGGTCAAGAATCTGGC TTCCCAATAAAATTCTACAAGGGATTCCGTACTGCTATACCATTATCATT ATCGCCGTCATGTTCGCAGTGTACGCTGGTTTGTTGCTATGGGTTTTTGA GCGGTCCTCCAATGATAATTTCAAAACATCAGGTGGCCCGATGTTGGGTT TGTATTGGAGTTTCGTTACTATGACAACGGTTGGATATGGAGATATCGTT GCCGTAAGTTTTTTCGGTCGAGTTCTTTCCGTCATTTGGATGTTTGTTGG ATTAATTATGGCAGCTATGTTGACTGCTACACTGACCAATGTGGTTACAG GAACGGAAGGTTTGAGTATCGAGGGGCAGGAAGTGGCTGTTGTTCGAGAC TCGCACGAAGAACGATATGTTCAGCTTGATTATTTCGCTAAACCAAAACT TTATGATAcctatgatgacgtcattaatgCAGTTCGCGAGGAGAAAGTGT ACGCGGCGGTTTTACCACACGACGTCGCAACATGGCGCCAACATGACATT CGAAACCCCAATGTTAAGAATCCGTTGGTTATTACGGGAGAACTGGATGG TCAGGTGCCGTTCGATTTCCTAGTCCATAAAGACGCCTTCCCAAAAAGTG AGGAAATTATGGACTGCATATTCAGCAAGTACAAATACGAAATTATTACA TCAACGATGGATATGTATAAACGAAGACTGATCATTGAAACGCTTTATTA TGGAAACGCGGACCAGATTTTCGAAGATAATCTTCCTGTACAAATAGGGA TTGGGCTTGCTGTTGCAGCTTTGTTTGTGAGCTTGCTTATAACTCTATAC AACCGAAGTCACCAAAAGACTTCTATTTCAGTtagagaaaagaaagaaaa gattgaagCTGTGTTTGACGAGATGCTGGTATTAATGCGAGATTATCGGG AATTTGTGAAAGTCAAAGATAATGGTGTGCTCGATCTTAAAGACGAAATT AAAATCAATATCGAAAAAACAGGCTGAACACTGATGCTCCGAATCTATGC CTTGGAGAAGAAAATCAGTTCGGAGAATACATCCGAAAATGGCATGATAA ATACTGATATATCTGAGGAAGGATGGCAAACGATAGTATATACAgctctt tttttctatttatctATAATTTATTTGTGTAAAATGTATATACTTTCATG TCCAatatttatttgaaataataatCATTGATTTacttaattattaaaga aagaaaatatgtaaaataaaTTATGTATAAATATAGGGCCCAGCCCCTCt tttaaaaaagtataaaattgaTCTACTAATACTTCCACCTTTGTTGGTGA ATGTTCATTAAAAGATCACCATAACTCCATCCGATTTTCCTTGCTGCAAT GGCCGTCAAACTATCTTGGTTCTGTCGATGAGGTCTACAAGCTCCTGTGA TGTTTGGCTTCATATTGAGGTCTAATAACCAATACTTGCCTTCTTCATCT GCTCTGCTGTCGATTCGTATGGGTGCCCTGGCGCCTACCAAACtaaaagc tttttcacattctGCGTATACTATTTGGATTTCTTTTGATTCTAGTTCAT GATCTTCGAGGACGGAGCTGTTCTCGGAGACAGCAACATCGCCATTCGAA GGTGCGATTCCGTTGACATGGTTGAATCGTTTCACAGCTGGCAAAGACCA TGGTGTACTTTTTTCCACTGTTTTATTCCCAATGAAGTATCTACCAGGAG GCATGACTGTAACAGTGATTTCTTGCCCTTCAAGATAGTTTTCAATGTAC AAAGCATTGCCGAATTCTTTGGCTGAAAACAATCGATTCAACTGCTCATT CATTTCCTCTTGATTTCGAACCACAACAACTCCTTGACTACCTCGTCCCC GAACTGGTTTAATGATGCATGGGAAATGGAAATCTTGTGGTAAATCACAC ATCTGTTGGATTGAAACAAGTCTTTGAGGTTGAACTGACAGTCCATTTGC TTTCAACAATCCACTGGTCAACATCTTATCATCATATTTGTCCAAATTGT TCGGTGATTGACCAACAAACTCGATATCTTTCCCGAAGAAGCTTTCCACA GGGTGTCCCTTATAAAGCACTGTATTCAACCAAAAACAAGTGGCTCCTTT CTTTAAAGCTTCTGCTATTCCTTCCTTGTTGTCCGGAAACACCCAATCAA AGTCTTGATCCACTGAAGGGACAGAGTTAGCAGTGATGATAGGTACTTTA AACTTCTGTAGCTGGTAAGCAATATCGGCACCACTATCTGAATAGCCGCC AGGTTTCATTGGTTTTTGAATCCCATTCACCAACGGTGGGAGTTTGGATT GATATAGAATGGCTAGTCTTTGAAGAAGTCTTCTTGAAGGCTGCATATTG AAAGTGAATATATTTTCTTTGACTTTGACTCTTGCTGTCATGCATCGTTT GCTTTCCTTTTTATACCCTTTctacagaacaacaaaaatgCAAAGTATGA AGGATTGCGAGACATGTTTGTGTTCTTTACCAGGAACtgtcaaatttttc agcaaTTCTCGACATATTTACACATATAAAATTCCCTTAACTGAAAcgtg attttgaaattatttagaTAAACCTTAGTGACTGACACTATTTAAACAAA ATGTTTACTTAAACGATTCAAGTAAAGCAATACTCTGGCCAAAATGCGTC AAAAATGCTTAGTAGATTCATTTTGTTACAAATCTCTCTTTTAATCGATA TTTGGGATTACCCTTGAAGTTTCGcttcttaatcaagttttttcTACTTT CAACTTTAATGACCTTTACAGCCATTGATATCGTCACAGAGCCAAGCTAT CATGCGATATCCTGGTTCACCATCTGTAAACATTTGAATCGACCCAGAAT AAGGCGCGATGAAAACTTTATAATGAAAAGTTGATTTCCGGGGTGAGCAA TGTGTCAAGATGTCTTGTAATGTACTATATTAAAAGCTTCCCAACATATC ACGGCCTACTCATTCTAAAGAGTCGTGACTATGTCAGTCAGGAACAATCA ACTAATTAGGGCGTTGTCCTGGTAAGGACGGTGTAGATTAAGTCACCATT TCGATGTCCTTATAGGGACGTTCTAAACTTTAATCTCATTTTCAGATGTT TTAAAGCTAAAAGCGCATTCTAGAAGCCTTTACCAATGGAAAAAGAAACA ACCTTAATTtgacaaattgaaaaaaaatcattaaaattgatCGGTGCGTT ATTTCAGAATCTATCATTTACTGTGCACTTATTTCACCCTGCCACAACAA GGCTACCATTATGAAATTTCTATGTTATCAGGCTCTGAATACATCAGAAT TATTCGGTTTTTAGACATGTAAAAATATGGGCATTAAAGCCTTAAAGAAT AATTAAAGATTCCATCAATGAAACCTTTTGAAACTCACTCTATGGAATCA TTTTCTTGTACTCTTTCCAATTGTAGTGCTTAGAATTTGCGCCGCTTTCG GCGTTTCAAGATATTAGCCCGGTGACTTATAAGgacatcaaaatcacttt ataAGGACATTGGTGTCTcgaactcaaaattttagaaaaattaaaattac ttcaacatacaaagttctaaaattttagagtaaGGTGCACCTAAAACAGT CTGaaacagtttgtttgatactgtctgtgagtgaacccttgtttacaaaa gcctaaaaattatACTAATAAGCACATTATAAACTCAACATTAAGCATCA ATAAAAAATCTCTAATACTGTTAAAACTGTctaaaacaataataaaaagc CAGCCTGCAATGTTTTGGTGTTCTTCATACTTCACAAAAAGttgttcaaa taaaaaatttgttaTAATATGACGGATGGGTCTATcgaaaaaaccgcgaa agtcTTAAAGAGCGGTTGGGCTCGCATCGACCAATAATCATTTGCATCCT CAGATTTGGATACAAGTGATTCAGGGAAACCAGATCGTAAACAACagaca aaaatataatttaatttaatttaatttttttttttaatttatagaagtgt atttctcaggtctattgacctctatgaaacaatcttacatctttacaatt tatagatcttatcattccattcgtttgtcaattctaaTTTCAATTTCCCT ACGGACGGTGCATTTACAACATTGGTTGCCAAACCGTTCCAAGTATCAAT GCTCCTATAGTAAAGTGAATTCGTTTGGTATCCTCTAATGCCGTNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTACGC CGGATCTTGAGGCTGGGTAGGTTCATGACTTGTAAACGTTCTTCATATGA ATGGTTTCTATAACCACCGACAAGTCTTGTGGCCCTACGTTGGATACTTT CAATTGCATCAGAGTGTTTGATCAGCCATGGAGACCAAAGGTGAGGTctc acaaatgcaatgaaaagtgtGCGGTGCATCTTGGGAGAAAGGAAGTCGAA GCTTCTGTTAATTAATCCAACGATCGAGTTAGCCTTCTTGATCTTGGTGT AGATGTGTTCTTCGAAATTCAATTCACTATCAATAATCACTCCAACATCC TTCTCTTGATCAAAATGTTCTAGGACAGAGCCAGCGATCTCATAAGGATG TGCATGTTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCATCTTCAGcg ttatttatttcttcaacaAGCTTTGTGTCATCGGCAAAGAGGAACATTTC TGAGTTGGTAACTTCAGCtagatcattgatgtaaataacGAAACTaatag actgtgaaatagtttatagtcaggatatccaggctaggtatAGCACTAAA GGTTCATAACCCATTCCCGCAAAGGTCCACTAAGTATGCATACTGCCATG AGGAGGGAAATGTCTATGTTACAGTGTTTCCGCTGctaaatattttaaga aaatattttatattttgaccaattGAATAcctttcttttcaacttttagg ccacctgaacattttttcctcagcggggataaaaattccaattgaaattc aaatgggGATATAAGTTCTATTGTTCGAAGGGTAAAAAATCctgtgggga tggttttggagtgtagTTTTTAACATTGATTTTCGGTtaggataaaatca aagtcaatttcccagtgaggctgaaattcacaggtattttcctaccgggg acgaaatttctCCCAAATGTTCcggtggggctggggtcccagcgggtttg tgacacaggggtgcaCCTGAAGTTGATATTATTCATCTATTATTAGGGGG GGGtccaaaaatgactttttttggaaattttgatgtttaaccatcttttt taaattaatttttcatgcCNtccaaaaatgaaatgaaattttgatgttta accatctttttaaaattaatttttcatgctgattccgaatttgaaaTCCG TTTTTCCATATCTCTTACCTCTGGGCGGCTACCGGAGACCCTTTTTTCGG AAAACCGCCCAAAACCGCTAAAAgtcaatgtttttgaaattttccatttt gaatagctttctaatgatgtgatatcttttttaaatcagtttttcatgct gattccgaatCTGAAATTCATTTTATCATAGCTCTCACCCTTGGCCTGGT ATAGGAGGctgtttttttactaaaatcttGGAATCCAAGGAAAATAGATA ActtgaaaatgtttgaatttgaatgaaaaatttaatgataacAACTTGTT TTAGAtcaagttttcatgctgatttcaaatttcaaattagtttCTGCACA TCTCCTGCCACTGACCTGCTACGGGGCCGGCTATATGAGGTTCTTTATTc agaaaatattgcaaaaaatgtgcaAAAATCGATATTATTGAAAGGATATT TCTAAGCTTTTAGTTCGTCTGTGGCTTTTTGACACTTGGCTAATGTTATA CATTCATCGTCATAGGGTGTCTTGAGTACTTTATCTTTATCCAATGAGCT ATACTGCTGTACTGCTGCTATGAATTTATCTGCTCAACTAGTCATGAAGC AAAATTCAACCTGCTTAGAATCTCGTTTAAACTATCTTGAGCTAGTGAAC TCCTTTCGAATACAATGATTCCCTAAATTAATTGAACATTGAAAAGTTGA TAATTGTTTTAGGAAGCCTTAATCATTTAAGGGGtaagttaaaattaaaa tcacTAGGCTAAGCTATCTCTTATACAGATAGCTAATATAtgggattttt caaataattttaattcaaaCAAGGCATATAAGAACAGGTTTATAGTGAAT TTATTGAAAGATACCAATGTTTAAGAAGTATAACCTATTCCTAAAAAGTA ACTTCCAAACAAATGGACCAATATGAAAGCATTTACATGGTTTTAAGGGA TGGATAAAACAATAGCGCCTTTCGATTGGTTCAATAAACAATTATTCGAA TGTAGGATTTTTAGATTCTATTTATTCGGTATAAGGTCTATACATTCCTA TGATTTTCATTGTAACTTAACCTTTCAAACAATGATATACAGCTTGTTAA AACCAATATCAACTTTTGAATGTCCAATGCGGACGATCATTGCATTTGGA AGAAGTTTACTAGCTCAAgatatttttaacaatttgaTTTTTACGTCTTT GATTATATTCTAAGCAGACAAATTAAAAGCAGCTCAGTCCATAGGGTTGC ATCATTGCATAAAGTGCTCAAAACTTTGTAACAAGGAATGTATAACCAGA TGTTTTGATAAATGGAATCCAAGTACAAGAATCtccttcaaaaatattca tttcagtacatttttgcgatattttcTGAATGAGGAACCTCATGTAGCCG GCCCCGTAGCAGGCCATGGGTATGAGATATGCAAAAACTGATTTGGaatt cggaatcagcatgaaaatctGATCTAAAACAAGTTGTtatatcattaaat ttttcattcaaagttcattcaaattcaaacattttcaaattatcaatttt ccttggattttcgaagattttagtaaaaaaacagCCTTCTATACCAGGCC AAGGGTGAGAGCTatgacaaaatgaatttcagattcggaatcagcatgaa aaactgatttaaaaaagatatcacatcactagaaagctattcaaaatgga aaattttagagatatggaaaaacggatttcaaattcggaatcagcatgaa aaattaatttaaaaaagatggttaaactcaaaaagtgtaATTTTGGACCC CCCCTACTATAAtcttttttcgttatttttgtttagaataaataataaaa attggCAAGTTATCACAAGTGAATGGACGATTCATGTTTCTAACAGTACG TTTTCTAATCCCAAGTTCCTGTGGATGGAATGTTGAACATTTTTGTTTTA TCTACATGGGTATCACTGATCATTACCCGAAATACGCCTTTTCAATAATC GTTTCATTAAAAGTTAATCATTGAACGAATGATAATAATGCAATGATTTC GATATGCGAGCGCTTCATCTCAAGGTTCAACCGTGGTCATTTTAATATca gttcaaattttgaaaatgaacttACTAACGATCATATTGATCAGACCACA AATTATTGCAATAGCATGACATTAACTAGGCTGATATCTATTACCTTACT AATTGCAAAGCAATTTTCTTTCTTGAGACTTTAACAAAATATCTGGATTT ATTctatacccgggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccg gggggggggggtacttaggcaaaaatggatgatgggtatgtacGGACGGT AAGGATCGGTTGCAAAAGTTGCAGATCAGCATGCAGATTGGTAATTGGTG TAATCAGGATcaatttgaaatgattttgatgttATGATTAAATTAATTGC TTAACAATAGTACAATCTTCAGCCATCATTAATTTGTTTTGGAACAAAAG GGATGGTCAGAAATCACAACTCGTTTGTTCATTCGTCGTGGCATTGTGGT GTTGGCTGTTCGTTCTTGGTAAGTTCTCTATTATTCTCTAATCACTCTCA TAAACTGAAAATGTTTCCTCTGTCGAAAATGGTCATCAACTACACTCATT ATCATAGCCTTTTTAAATTATCAGGGCTATCGATTGTACGTTAATGGTGA TCATTCTAAAAATTCGAATGGATTCGACCATGCTGCATGCGATGAGTTTC GACTTATGACGTCGTCGTTTCTTTAAATGTAATTCCAAGACAACCTAAAt cagaagaaaatatttttagctaAAGCCATGAGAACactttgtaaatattt cttggaGCACGGTGTGTCATGACAGTTTTCGAAAGGCTAGGTTTGAAATC TCGAGTCTTCAAGAATTTTCAACTACAATACAACAGCTGTAGTtatgaaa tggaaaattttattaaaggttttgtttttaaataagtctgatatcgtttg cttactatactcatcaattttaattcacaagctttttcacgttggattga catggatgtggagtaagattggccagaaagatgaaaagaaaaacatcttt ttgcttatatcagcataacataacaaggactacactgtcctgatatgaaa taagtgtctgatatgaaacggaaacacttctgtaaaaataaaacctttaa tccgTTATGTTGAAGTCGAGAAAATTGgatgatgttttttttcaaagtct aTAAAGTGAACTGTTTGTCTGGACATTATTTCCAAGTTGATTCTCCAGAT CTTGATCTTAATCCTTTCCCTAAAAAGGAAGACTTAATTGGATAGAAAAC ATCAGattaattgaaataaaaacattgtcAATTGACATTTGAGGCGTGTG GAACCAAAATAAATCATTAAAGAACAACATAACATTTTAAGCTTTTGTGG TCGAGGGTGgttaattaaaattgaaaaaaagcttCAATGACATGAACTTT TGGCTTTAGTGAGATATTTGAATGAATATATTACACTCACTTTTTTGAAc atttatttgattttcagttttagCATTTGAGACAAAATGTACCAAGCCTC TTTGTTGTGGATTGCTTTCAACTTAGCGATCTGTTTCGCCGCAAATTTCG AGTTGACGGTTTTACACACGAATGACGTACACGCGCATATCGAACAATTT AACGTTTACGGTGGTACGTGTACTCCGGAAGACGCCGCTGGTAATAAATG TTACGGCGGTGTAGCACGGAGACAAACAGTGATCGAAGAATTACGTAAGA CCATCCCCAACACAATTCTTATTGATGGAGGTGATCAATTTGCTGGCACT CTGTGGTTTACTATTTACAAAGGAAAAGCTGCTTTGAGATTCATGAATTA CATCAAGTATGACGCAATGGTAGGTCCTATTTCTCCCTTTTTTAAGCTTA TCCAAACTGCTCTTCTGTGGCAATTCTCTCCAGAATGTGCATCCTTTATC TCTTCTTCCATCTCATAAATGGGCTCCAAGAGTCTTTAATGTCTAGACAA GGGAAAAGACTTCAACCATAGCAGGAACTTTTAATCCACCAAAGTTATCT TTTTACTATGTAGTGGGGGTTTAGAAATGATTCCCTATAGTCAACCTTGT ACAATTATCTGGTGTAGATATTTTCTCTTATCACCTTACAAAAtactttt acaatttttctgTTTACTACAGGCAATTGGTAACCACGAATTTGACAATG GTGATCAAAACTTGATCGATTTCATGAAAAATACATCTTTCCCCATCGTT TGCACAAATATGGATGTGTCCAAGCAAACGGATTGGCCAGATCCTCCAAT TTATAAACCTTCCACAATTTTGGAAAGAGGAGGCAAGAAGATCGGTATCA TTGGATACACAACTCCCGATATTACTTGGTATGTATTCATGAATatgaat tttcgaattttttccgAAACTTGTATCTAGAGTCTTCATTTGAATTTTAA CTCTTAAGAGAGTTCTcgggatttatttatttattttttatcaaactatt gaaaatatCCGAAAAGCTGTTTTCCGGTTGTTGTTTTGACAAGTTATAAT TTCTTAAGCTGAgaagatattcaaaatgaacCAACAATGGTGACGTTTTA TTTTTGTGACAATAGAAATCTTAAACTGAGACATTCCTATTTTGTAGGCT CTCAAAACCAGGCCCAAACATTAAATTCAGCGATCCTGTGGAGTCGGTCA GAGCAGAAGCCCAGAAATTGAAAGCTCAGGGGGTCAATATTTTGATTGCA TTGGGTCACGCTGGATATGCAAAGGATCAAGAAATAGCAAGATCAGTAAA AGAACTTGACTTGGTTGTCGGAGGACACACAAACACCTTTTTGTGGAATG GTAAGAAATctatttatttttactttttggtcccaaaaaattgttcaata aatttaaagcattttttaaCCAAAAGGTAACGAATCTAGTCATTTTTTGA GTTAGCTTTTGATCTTCCATGAAATCTTATTATTGTCAAAATTCATTAAA TCTCATAATTTTCTCTTATTCAGGACCCCAACCATCAGTGGAGAAAGTGG AAGGACCTTATCCATTCATGGCGCAACGAGATGATGGTACTGAATGTCCA GTCGTCCAAGATTTCACTTACGGAAAATATTTGGGTAATTTGAAGTTGAC TTTCGATGAAAATGGTAAATTGTTATCAGCTCAAGGAAATCCCATCATGT TGAATGCTTCTTATGTTGAAGATGAGGAAGTTTTAAAAATGGTGGATGAA ATGGACGACCCCATCATCAAAGCAAGAATGGTAATTGTTTTAAGATAAGC TTTAGAAACGCAAAGAACAGGCTTTTAGAATCTgccaacttaaaaaaaaa atcctcaaaTCTAGATTCATATTTAAAGTTTCCTTGTGAttatgaaacta attttctttatttattatcaaaataaaaccaaataCACCCTCGTCCACGC CTTACAGGTTAAGGAGATTCATACCCCTTAATACATCTTTTTTTATTAAG GATCCCATTGGTCGTTCATATGTCCGTTTAGAAGGCGATCGCTCCATTTG TCGTTTGAAGGAGTGCAACCTGGGAAATTTCTTCGCAGATGCTTTGGTTG ACGCCCAAGTGAAAAATCCTTCCACAGAACAATGGGCTGAAACTGTTCTC GCTATCTGGAATGGTGGTGGTATCAGATCTGGAAATATTGACAAAAGATT TGATGGTAATTCTTTTAGTCCTGGAGAAAAGTTTTATTGCACCTTTACTT CAACATCATATTGTACGGTTACTCTGATCTCAAACAAGATTGAATAAAAT CTTGAAGTTTTTGTTCCTAACAGACCATGCGCTATCAATTTCTATCATTA CATAAATAGTCTTCTATTTCACACATGCTTGAGCAAGGGAATTTATTTCA GGTAAtgcatattttccaaattcTTTGTCAGATAAATCACGAAGTTGAAT ATTTGCTACGGTATCCACGTAGAAACTTTACTACAACTTTTTAATAtctg taaattttatttttttcgtttttcatacAGAGCAAATCAATAGAGAAGAT CTCAGCACCATCAGTCCTTTCGGAAATACAGCTGACCTCATGGAAATCAA AGGCAAATATCTACTTCAAGCATTTGAACATGGATTTTCTGGTATTGAAA ACAACGAAGGACGATATCCCCAAGTATCAGGTATTAATTCCTCTCTTTTC TTTGAAGGTACAGAATGACATTTACAGGTTAATAAGATAATGCACTAAGC TGGATTATATCAACGAGTCTTTGATTTTGTCCAGACGTTTCTACTTGGTG TCAAGAAAAAGAGAAGCTCAAATTATCAAGAAATAAGATAAGAAATTAAT TATGTCCCGTTTCTTCATCctctttcatcttcattttaatcTTTATGATG AATCGACTCAAGATTATCCTTTTCACAAGGTTACATTCGAGACCAATACA ttgttctcaacatgttcttattttcaccattttgtgggtGTATTTGccca tttccctaagaaatcgggtgttttagagtctgtaaagccttaacttgttc ttaatacttCGGCCATCGTAGCCTAATATTCTTACAGAAAATACATGAAT AGCAAAATgcaatcatagtataagaaagccgcggctggaatgataacatc tgaatttctgttgctctatctctgtcgtatttgatgactatttgttgatc aagaaatcagtaatgtagcatcttcgattgtaaattttattggtttgtcg ttaatacttacttatCAGTGCGTTTtaaacattaatgatatgcccttgat aatacagttgcattataaaatcattgtaaaggaaagatcaacaacaagaa atttaaacaagcacaaaattgctgggctgaaagaactcaaatattaataa agtgcctccgaatgccttcacaatatttcagtgaaatctttttaaaaatc aatgaaaaagtacgtcaagataatactgtgaaaatttcaagccagcaccc tcAAACCACCCCTagaatatgtccaaaattagttcaagtgttctattgga tacagattcaaagatatttaccaataaaaaaactttttatgaaggaaaat gagagaaaaatttcaaaaactatctaccaataataaactgagcatcttga tgttcttataaagctcggagacagagatggaacagcaattaaataaaaag acagtgcggtacatattccagccgcagctttcttatactatgatgcAATG ACTGTCAAttaaaaaatagccaaaaactAAAGAATTCtcgtcatcaaaac aaagtatTAATCCACTTACAAGCTAGAAGAGATCAAATTACTGCAACTTA ATTTCTTCATCATTATGACCACACGTCTTACCGCAAAACTTAATTAAAGA TGTTGATAGTGCAGAATCAGGCTTGAGAAGCAATTGATAAGCGTATTAGA GAGTATGTAAACTCTACAGTGATGAATGTCATAAgtaaggtttatttttc ttaggaTTTCGTGTCACCTACGATAAGACGAAGCCAGTTGGAAGTCGCTT GATCAGAGTTTTAGCTTTATGTAACAAATGTCGCGTTCCTAAATACgaag aaatcaaagaagaacaaatctataaggtttgtttattttttttactattG TGCAGTGATCTCTGATTTAGGTTAGGGCATATTCCCATTTTTGGGAAGGT GTatgtcttgtcttgtcttgttTATTTGCTACCATCTCCATTGAACGAAT GAGAAAAATGGTTTGCCCTTGATTGACcctgaagaaaagaaaaaagacat GATTTTTCGATTCTACTGTTTCGTAGTAACATCACCAACTGGGACTTGTA GATCGTGAACAAAGTCCAGTCTAGCATCATACAACCTTACCCCGTGACCC TCTCCTGCATTGTACAGAGCTGCTAAACTTTTCTGGTATTCtaaacaaga aagcctaagcggTGTAAAGGCCCAGCAGCGTTGGTAGTGTCAACATATTT TTCGTTGCAGAGTCGCCATAGAACTTAATTTGCAGGAGTGAATTTTTTCG CATACGTCTGCATGCGCACAATAGAAAGTCAGATAATTCGATTTTTAACC TAGACTCATCAATTGATTATTGCGCGCATGGGCCCTGACAAAGTCAAATC TTTTCGACCAGTTGTGTTTTAAAGGCCTATTCCGTTGCGCCCTGGGCCAA CTAAATCATCTATACACAAGTTATTTATGTGTTagttttttggatgtttt tcatTTGTGGCGAATGTTTTCTTTCAGGTCGTTTCTTCGGATTATTTGAT CAGTGGAGGTGATGGATACAGTATGTTTCTGAACAAAGAGAGTTCCACTA AAGGTGAAGATGCACTGGAAGTGTTGGAGAAGTACTTCCAAAAGATGTCG CCAGTCACCACCCCTGATGAAGGGCGGACAATTGAAGTCAGCACCAGCAA GGATTACACCAAGACAGACGACGATTGTTCATCTGCATCCTTCATCTCGT TCAACCCTATCTTCATTGTTGTCGTTTTGTTCATATCCTACTTTATTTAG TGAATGAAGTATTCGGTCcttcaatattgaaatcatatgTAATACTTTAA AtgtaatattttaaacaaacttGTGGATACTGTTCCTCTCCTAGATTCTC ATGAAGCTATCTTTGAGCACACACCATGTGACAGACCCGGTggcactgga aaattgactttggtgtCATCCCCATCTGAAATTCCATTGATAATAtcgca ctccaaaaccatccatTCATTCTGGAGTTTTTAAGCTTGAAGCGAatgaa tttctatccccattgtaAATTTGATCGAAATTATATCGCGATGAGCTCCA CTGGGAGCACTGAGATAGAGATGTTTTAGTTATCGTCTCCATTTTACTTG GAAGAAATTTATGTAAAATGTATGTCTATATATTGAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033816XLOC_033816Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053587-exon-scaffold_233-1491911889:887521..887772TCONS_00053587-exon-scaffold_233-1491911889:887521..887772Clytia hemisphaericaexon
TCONS_00053587-exon-scaffold_233-1510915933:887521..887772TCONS_00053587-exon-scaffold_233-1510915933:887521..887772Clytia hemisphaericaexon
TCONS_00053587-exon-scaffold_233-1575043694:887521..887772TCONS_00053587-exon-scaffold_233-1575043694:887521..887772Clytia hemisphaericaexon
TCONS_00053587-exon-scaffold_233-1491911889:887993..888197TCONS_00053587-exon-scaffold_233-1491911889:887993..888197Clytia hemisphaericaexon
TCONS_00053587-exon-scaffold_233-1510915933:887993..888197TCONS_00053587-exon-scaffold_233-1510915933:887993..888197Clytia hemisphaericaexon
TCONS_00053587-exon-scaffold_233-1575043694:887993..888197TCONS_00053587-exon-scaffold_233-1575043694:887993..888197Clytia hemisphaericaexon
TCONS_00053587-exon-scaffold_233-1491911889:888431..888529TCONS_00053587-exon-scaffold_233-1491911889:888431..888529Clytia hemisphaericaexon
TCONS_00053587-exon-scaffold_233-1510915933:888431..888529TCONS_00053587-exon-scaffold_233-1510915933:888431..888529Clytia hemisphaericaexon
TCONS_00053587-exon-scaffold_233-1575043694:888431..888529TCONS_00053587-exon-scaffold_233-1575043694:888431..888529Clytia hemisphaericaexon
TCONS_00053587-exon-scaffold_233-1491911889:904250..904300TCONS_00053587-exon-scaffold_233-1491911889:904250..904300Clytia hemisphaericaexon
TCONS_00053587-exon-scaffold_233-1510915933:904250..904300TCONS_00053587-exon-scaffold_233-1510915933:904250..904300Clytia hemisphaericaexon
TCONS_00053587-exon-scaffold_233-1575043694:904250..904300TCONS_00053587-exon-scaffold_233-1575043694:904250..904300Clytia hemisphaericaexon
TCONS_00053587-exon-scaffold_233-1491911889:905625..905746TCONS_00053587-exon-scaffold_233-1491911889:905625..905746Clytia hemisphaericaexon
TCONS_00053587-exon-scaffold_233-1510915933:905625..905746TCONS_00053587-exon-scaffold_233-1510915933:905625..905746Clytia hemisphaericaexon
TCONS_00053587-exon-scaffold_233-1575043694:905625..905746TCONS_00053587-exon-scaffold_233-1575043694:905625..905746Clytia hemisphaericaexon
TCONS_00053587-exon-scaffold_233-1491911889:906398..907058TCONS_00053587-exon-scaffold_233-1491911889:906398..907058Clytia hemisphaericaexon
TCONS_00053587-exon-scaffold_233-1510915933:906398..907058TCONS_00053587-exon-scaffold_233-1510915933:906398..907058Clytia hemisphaericaexon
TCONS_00053587-exon-scaffold_233-1575043694:906398..907058TCONS_00053587-exon-scaffold_233-1575043694:906398..907058Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:887521..907058 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.930197 0.302891 0 0 1.61336e-07 0.627845 0 0 3.26885 9.9936 0 0
Blast
BLAST of TCONS_00053587 vs. Swiss-Prot (Human)
Match: 5NTD (5'-nucleotidase OS=Homo sapiens GN=NT5E PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.038e-58
Identity = 109/293 (37.20%), Postives = 168/293 (57.34%), Query Frame = 1
Query:    4 PSVEKVEGPYPFMAQRDDGTECPVVQDFTYGKYLGNLKLTFDENGKLLSAQGNPIMLNVSYAEDEEVLKMVDEMDDPIIKARMDPIGRSYVRLEGDRSICRLKECNLGNFFADALVDAQVKNPSTEQWAETVLAIWNGGGIRSGNIDRSFDADISREELNTISPFGNTADVMEIKGKYLLQAFEHGFSGIENNEGRYPQVSGFRVTYDKTKPVGSRLIRVLALCNKCRVPXXXXXXXXXXXXVVSSDYLISGGDGYSMFLNK-ESSTKGEDALEVLEKYFQKMSPVTTPDEGR 879
            PS E   G YPF+   DDG + PVVQ + +GKYLG LK+ FDE G ++S+ GNPI+LN S  ED  +   +++    +       +G++ V L+G    CR +ECN+GN   DA+++  +++     W    + I NGGGIRS  ID   +  I+ E L  + PFG T D++++KG  L +AFEH       + G + QV G  V YD ++  G R++++  LC KCRVP Y+ +K +++YKV+  ++L +GGDG+ M  ++      G+  + V+  Y  KM  +    EGR
Sbjct:  254 PSKEVPAGKYPFIVTSDDGRKVPVVQAYAFGKYLGYLKIEFDERGNVISSHGNPILLNSSIPEDPSIKADINKWRIKLDNYSTQELGKTIVYLDGSSQSCRFRECNMGNLICDAMINNNLRHTDEMFWNHVSMCILNGGGIRS-PIDERNNGTITWENLAAVLPFGGTFDLVQLKGSTLKKAFEHSVHRYGQSTGEFLQVGGIHVVYDLSRKPGDRVVKLDVLCTKCRVPSYDPLKMDEVYKVILPNFLANGGDGFQMIKDELLRHDSGDQDINVVSTYISKMKVIYPAVEGR 545          
The following BLAST results are available for this feature:
BLAST of TCONS_00053587 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
5NTD1.038e-5837.205'-nucleotidase OS=Homo sapiens GN=NT5E PE=1 SV=1[more]
back to top