|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053587 ID=TCONS_00053587|Name=TCONS_00053587|organism=Clytia hemisphaerica|type=transcript|length=1390bp AAACCATCAGTGGAGAAAGTGGAAGGACCTTATCCATTCATGGCGCAACG AGATGATGGTACTGAATGTCCAGTCGTCCAAGATTTCACCTACGGAAAAT ATTTGGGTAATTTGAAGTTGACTTTCGATGAAAATGGTAAATTGTTATCA GCTCAAGGAAATCCCATCATGTTGAATGTTTCTTATGCTGAAGATGAGGA AGTTTTAAAAATGGTGGATGAAATGGACGACCCTATCATCAAAGCAAGAA TGGATCCCATTGGTCGTTCATATGTCCGTTTAGAAGGCGATCGCTCCATT TGTCGTTTGAAGGAGTGCAACCTGGGAAATTTCTTCGCAGATGCTTTGGT TGACGCCCAAGTGAAAAATCCTTCCACAGAACAATGGGCTGAAACTGTTC TCGCTATTTGGAATGGTGGTGGTATCAGATCTGGAAATATTGATAGGAGT TTTGATGCGGATATAAGCCGTGAGGAACTAAACACGATTAGTCCTTTTGG AAATACAGCAGATGTCATGGAAATCAAAGGCAAATATCTACTTCAAGCAT TTGAACATGGATTTTCTGGTATTGAAAACAACGAAGGACGATATCCCCAA GTATCAGgaTTTCGTGTCACCTACGATAAGACGAAGCCAGTTGGAAGTCG CTTGATCAGAGTTTTAGCTTTATGTAACAAATGTCGCGTTCCTAAATACg aagaaatcaaagaagaacaaatctataagGTCGTTTCTTCGGATTATTTG ATCAGTGGAGGTGATGGATACAGTATGTTTCTGAACAAAGAGAGTTCCAC TAAAGGTGAAGATGCACTGGAAGTGTTGGAGAAGTACTTCCAAAAGATGT CGCCAGTCACCACCCCTGATGAAGGGCGGACAATTGAAGTCAGCACCAGC AAGGATTACACCAAGACAGACGACGATTGTTCATCTGCATCCTTCATCTC GTTCAACCCTATCTTCATTGTTGTCGTTTTGTTCATATCCTACTTTATTT AGTGAATGAAGTATTCGGTCcttcaatattgaaatcatatgTAATACTTT AAAtgtaatattttaaacaaacttGTGGATACTGTTCCTCTCCTAGATTC TCATGAAGCTATCTTTGAGCACACACCATGTGACAGACCCGGTggcactg gaaaattgactttggtgtCATCCCCATCTGAAATTCCATTGATAATAtcg cactccaaaaccatccatTCATTCTGGAGTTTTTAAGCTTGAAGCGAatg aatttctatccccattgtaAATTTGATCGAAATTATATCGCGATGAGCTC CACTGGGAGCACTGAGATAGAGATGTTTTAGTTATCGTCTCCATTTTACT TGGAAGAAATTTATGTAAAATGTATGTCTATATATTGAGT Run BLAST on NCBI transcript from alignment at scaffold_233:887521..907058+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053587 ID=TCONS_00053587|Name=TCONS_00053587|organism=Clytia hemisphaerica|type=transcript|length=19538bp|location=Sequence derived from alignment at scaffold_233:887521..907058+ (Clytia hemisphaerica) AAACCATCAGTGGAGAAAGTGGAAGGACCTTATCCATTCATGGCGCAACG
AGATGATGGTACTGAATGTCCAGTCGTCCAAGATTTCACCTACGGAAAAT
ATTTGGGTAATTTGAAGTTGACTTTCGATGAAAATGGTAAATTGTTATCA
GCTCAAGGAAATCCCATCATGTTGAATGTTTCTTATGCTGAAGATGAGGA
AGTTTTAAAAATGGTGGATGAAATGGACGACCCTATCATCAAAGCAAGAA
TGGTAATTGTTTTAAGATAAGCTTTAGAAACGCAAAGAACAGGCTTTTAG
AATCTgccaacttaaaaaaaaaatcctcaaaTCTAGATTCATATTTAAAG
TTTCCTTGTGAttatgaaactaattttctttatttattatcaaaataaaa
ccaaataCACCCTCGTCCACGCCTTACAGGTTAAGGAGATTCATACCCCT
TAATACATCTTTTTTTATTAAGGATCCCATTGGTCGTTCATATGTCCGTT
TAGAAGGCGATCGCTCCATTTGTCGTTTGAAGGAGTGCAACCTGGGAAAT
TTCTTCGCAGATGCTTTGGTTGACGCCCAAGTGAAAAATCCTTCCACAGA
ACAATGGGCTGAAACTGTTCTCGCTATTTGGAATGGTGGTGGTATCAGAT
CTGGAAATATTGATAGGAGTTTTGATGGTATGGATAACTTCTTGATGATT
TGATGCTCGATTTTTGACTTAACTTTCATTTAACTTCTTTATTCCTTGTA
TGTAAGATGAAACCACTCGTTTTGAAATTAgggaaaattttaataatttt
tgagaattctaaatttcaaattttggtatTTATTCTGTACTTAAACTTTA
CGTAATCAAAAAGAAACGAGAAGGATTTGAGCTTACCTTGCTTTTATTTC
ATCATTTAAGCGGATATAAGCCGTGAGGAACTAAACACGATTAGTCCTTT
TGGAAATACAGCAGATGTCATGGAAATCAAAGGCAAATATCTACTTCAAG
CATTTGAACATGGATTCTCGGGTATCGACACCAAAGAAGGGCGGTTCCCA
CAAGTATCAGGTTTGTTTTCTACACCCTCTTGTGTCAAATTTTCAGATCG
TACttcgtttgaatttttttttgtaagggccGAAATGGCCTGCCTAAATG
GTGAATATCATAGAGTCTTGCaccttttaattttcaaaaattaacttgtt
tgttcttttttttaggATTTCGTATACTGTACGATAAGACGAAGCCAGTT
GGAAGACGCTTGGTTAGAGCTTTAGCTTTATGTAACAAATGTCGTGTTCC
CAAATACgaagaaatcaaagaagaaCAAATTTACAAGGTGTGTATTTGCA
TAACCTAAATGGtttctaataaaagaaatttaGATCATTTGAGAAACTTT
GATCTACGCAAAACGAATTTAAATGTGTGTGGTTTCTAACAATATTCTAG
CAAAAGTAATTGGTTTCGAATATAGAAGTCCTAAAATATAACTTATGAAT
TataattagaaatatttcgTATTTTGATCTAGATTCGAGTATCTACTGTA
AACGATTTGTGTTCAAATATGAATTTTAGTCGGTAAAAAACATAAGTCAA
ATTTTCCACATCAAAACACTATGTTCCTCTCATAAGTTACCCTGGGAATC
CAatctcataatcttagaaaaaacaaaaaataactcgcctgcagggagat
ttttccctgcaatgcagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNcgcgaaagtactgctaagtaat
acgccgaaagctggccaatcaggccgaacctgcattgcagggaaaaatct
ccctgcaggcgagttacctgcgccaagcctTAAACAAGCtctaaaaatat
cataaactagactgtgaaaaaagtttaacactTGGATTTCCAGGCTANat
aatttatggaaaaagctgactctgcagaaaaaaggaaaacaaatgaaaat
gaaaacatagattcatttagaaacaaaatggctgttggctcaTCTTGGTT
CATCtcacaaagttttaaaattatagagcttggtgcaggtagattagNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGGACAATAAAATGTGAC
GTCATAGAAAATTACAAAAGCCTCGAGGGACGTATAATAAAGATAACTAT
CCTCCAAATGATGCTGGTGATTAAGGAATTGTTTACATCTACTTTCTTAA
TAGTTGGTGACATCGAGCTACCTGGCGGACGGAGGGGACGGTTACACCAT
GCTGAAGAAGAACGAAGGCCTCGTCAAAGGTGAAGATGCTTTAAACGCCC
TCGACGCCTACTTTTAGCAAGATGTCGCCTGTCACCGCTAAAATTGAAGG
GCGGGTCATCGATATATCTACTGGTGATTTGTATAGACATTCTTCGTCAA
GTGCGTTGCGTTCAGGATCGATCAATGGCATGGTATTCTTTCTTTGTTTG
GTGTTTTGTCTGTTAAGATtataacagattttttgaatgtttgtttTGAG
GTAAGTAATGAGAAGTTCTCAGGAAAAGAAAATGGTAGACTTTGCTACGG
TACATTTGATCTGAGCTTGAGTGGTAGATCTAAAATGGAAGACATATATT
GTATCATCAATGATTGACGATGGGTATCTGGTTGCCATACGAGCTCAAAA
TCTGTTTGTGACTTTTTGATGAATAGCACCATATATCGCTACTTTCACGC
TGCTTCTTAATAAGATGAAAGAGGGATTTTAAGTATTATGAATATAAACA
GcgtaacaaaatattttctgtcTTGTTTGAATTATGTAACTTAAGGCGAG
TCCTTCGAAAAGTCCAAACCTTTTAAAGGtctgtttccatcgatcgcgcg
agcgtgTACCCTAGgccaaaatttcctaaaatagattttctgatggaaat
caaacattgatcgcgcggagtgtgcggccaaatctattttaagaattttg
gccTAGCGTGCACGGTCCCGCGATCGATTGAAACAGGCCCTAATGAAATT
GATGTTTAATTAACCCTTTAaatgccaatgtcgtatatatcagacatggc
ctatgtaggagggcgaagccctgccctcctgtaatgcccagtttgagtta
gaaatcgtcatttttggtccaactcgtaggaattggattgggcttcatgg
tcaagcaaaaagcaatcaaaagggagtctttccagcgagattttagtaaa
aacaaatgcaaaaatttgacaaaaatccacttttttcagattttgaccgt
ttttgaccatttttagtcaacgagtgatccaataACCTCTaaatttggcc
ctgctttacttgattctgttctccagcgaattaatttgaagttttaccac
tgggaacctttctatcattcaggcaggtcctcGCAGCGGGCTATGAacaa
gcttctaactccttctagatccggagatataagctgaaaagggccaaaat
tcgcgagaatcgcgaaagtttctgctcgcgaaagtttgtacgcctaaagt
aaacTCGGTGAAACTCCAACTAACTTTGCTTTTTCACTTAAATAAATTTC
CTTTTTGCGAGGAATAAGGAATAAGATCAGGCCTTGGAATAAGATTCAAT
ATCACTTATGGTTTCCCGCAAAGTAAGCAAAAGAGAATTCGACCCAGTTC
ATCatttataattttgattttgataaaattttaattaaatttatgatttt
tttttcattttgaatatttgaaaataaattatggGTACAGAAAAGGATAT
TTTGAATTGCATAATTTGCTGTTTAGGAGTTATATGAAGCTTATATAACG
CTATTAAGATGATAATCAATTGGACTGTACACATCATCGCGCTACCTTTA
CATTCATTAATCGATATCCACTGTGTGttaataattgataaaatcaaaac
tgctcatttttttttttaatctaaccTGTATACAATATATAGCACCTTGC
CAAATTTACGTAACTTTTGCAAATAAATTAGAACATTTTGTGTAAAAAGC
TCTCATTTGCAAAATCATTTTTCTCGTTTCAAGATATTAGAAGAAGAATA
TTAACTAGATATCACTTTGGTGAGTTTGATGTTGAGATATTGGGTGCTAA
TATGGTCAATTTTGTCTCTCTATGTTATCTCGTGGCTTTTATAGCACTTG
GAAAAACCTCCNTCAATCTTGTCTCTCTATGTTATCTCGTGGCTTTTATA
GCACTTGGAGAAACCTCTAAACCGAATCAATGGCATGGTGTCTTTTGGGA
AGTAGAACCCTACATCAAATACAACTCATCGCTGGGGATTTACGAAGGAA
TCTTTCCTACcattttcttgaaagcaatAAGCTACTGTAACATCTCACAG
AATCGTATCTTATCCTATGACGTTAGCCTTAAATCGAGAAATGAATTCCA
AAAGACGCTTGAATCAAAAACACTTAAAGGGGATGGAATTCTCGCTAACA
TTTCCAGTTCCAATGCTGCAGCATGGTTTCCACACGATGTAGACAAAATC
AAGAAAGGGCCGTTCGCTTTTCTGAGGAGAAATTTGACAGTCATGGTTGG
TGTTTCAAGTGAGGGTTTAGCTGTAATTCAACCAAGGTCAAGAATCTGGC
TTCCCAATAAAATTCTACAAGGGATTCCGTACTGCTATACCATTATCATT
ATCGCCGTCATGTTCGCAGTGTACGCTGGTTTGTTGCTATGGGTTTTTGA
GCGGTCCTCCAATGATAATTTCAAAACATCAGGTGGCCCGATGTTGGGTT
TGTATTGGAGTTTCGTTACTATGACAACGGTTGGATATGGAGATATCGTT
GCCGTAAGTTTTTTCGGTCGAGTTCTTTCCGTCATTTGGATGTTTGTTGG
ATTAATTATGGCAGCTATGTTGACTGCTACACTGACCAATGTGGTTACAG
GAACGGAAGGTTTGAGTATCGAGGGGCAGGAAGTGGCTGTTGTTCGAGAC
TCGCACGAAGAACGATATGTTCAGCTTGATTATTTCGCTAAACCAAAACT
TTATGATAcctatgatgacgtcattaatgCAGTTCGCGAGGAGAAAGTGT
ACGCGGCGGTTTTACCACACGACGTCGCAACATGGCGCCAACATGACATT
CGAAACCCCAATGTTAAGAATCCGTTGGTTATTACGGGAGAACTGGATGG
TCAGGTGCCGTTCGATTTCCTAGTCCATAAAGACGCCTTCCCAAAAAGTG
AGGAAATTATGGACTGCATATTCAGCAAGTACAAATACGAAATTATTACA
TCAACGATGGATATGTATAAACGAAGACTGATCATTGAAACGCTTTATTA
TGGAAACGCGGACCAGATTTTCGAAGATAATCTTCCTGTACAAATAGGGA
TTGGGCTTGCTGTTGCAGCTTTGTTTGTGAGCTTGCTTATAACTCTATAC
AACCGAAGTCACCAAAAGACTTCTATTTCAGTtagagaaaagaaagaaaa
gattgaagCTGTGTTTGACGAGATGCTGGTATTAATGCGAGATTATCGGG
AATTTGTGAAAGTCAAAGATAATGGTGTGCTCGATCTTAAAGACGAAATT
AAAATCAATATCGAAAAAACAGGCTGAACACTGATGCTCCGAATCTATGC
CTTGGAGAAGAAAATCAGTTCGGAGAATACATCCGAAAATGGCATGATAA
ATACTGATATATCTGAGGAAGGATGGCAAACGATAGTATATACAgctctt
tttttctatttatctATAATTTATTTGTGTAAAATGTATATACTTTCATG
TCCAatatttatttgaaataataatCATTGATTTacttaattattaaaga
aagaaaatatgtaaaataaaTTATGTATAAATATAGGGCCCAGCCCCTCt
tttaaaaaagtataaaattgaTCTACTAATACTTCCACCTTTGTTGGTGA
ATGTTCATTAAAAGATCACCATAACTCCATCCGATTTTCCTTGCTGCAAT
GGCCGTCAAACTATCTTGGTTCTGTCGATGAGGTCTACAAGCTCCTGTGA
TGTTTGGCTTCATATTGAGGTCTAATAACCAATACTTGCCTTCTTCATCT
GCTCTGCTGTCGATTCGTATGGGTGCCCTGGCGCCTACCAAACtaaaagc
tttttcacattctGCGTATACTATTTGGATTTCTTTTGATTCTAGTTCAT
GATCTTCGAGGACGGAGCTGTTCTCGGAGACAGCAACATCGCCATTCGAA
GGTGCGATTCCGTTGACATGGTTGAATCGTTTCACAGCTGGCAAAGACCA
TGGTGTACTTTTTTCCACTGTTTTATTCCCAATGAAGTATCTACCAGGAG
GCATGACTGTAACAGTGATTTCTTGCCCTTCAAGATAGTTTTCAATGTAC
AAAGCATTGCCGAATTCTTTGGCTGAAAACAATCGATTCAACTGCTCATT
CATTTCCTCTTGATTTCGAACCACAACAACTCCTTGACTACCTCGTCCCC
GAACTGGTTTAATGATGCATGGGAAATGGAAATCTTGTGGTAAATCACAC
ATCTGTTGGATTGAAACAAGTCTTTGAGGTTGAACTGACAGTCCATTTGC
TTTCAACAATCCACTGGTCAACATCTTATCATCATATTTGTCCAAATTGT
TCGGTGATTGACCAACAAACTCGATATCTTTCCCGAAGAAGCTTTCCACA
GGGTGTCCCTTATAAAGCACTGTATTCAACCAAAAACAAGTGGCTCCTTT
CTTTAAAGCTTCTGCTATTCCTTCCTTGTTGTCCGGAAACACCCAATCAA
AGTCTTGATCCACTGAAGGGACAGAGTTAGCAGTGATGATAGGTACTTTA
AACTTCTGTAGCTGGTAAGCAATATCGGCACCACTATCTGAATAGCCGCC
AGGTTTCATTGGTTTTTGAATCCCATTCACCAACGGTGGGAGTTTGGATT
GATATAGAATGGCTAGTCTTTGAAGAAGTCTTCTTGAAGGCTGCATATTG
AAAGTGAATATATTTTCTTTGACTTTGACTCTTGCTGTCATGCATCGTTT
GCTTTCCTTTTTATACCCTTTctacagaacaacaaaaatgCAAAGTATGA
AGGATTGCGAGACATGTTTGTGTTCTTTACCAGGAACtgtcaaatttttc
agcaaTTCTCGACATATTTACACATATAAAATTCCCTTAACTGAAAcgtg
attttgaaattatttagaTAAACCTTAGTGACTGACACTATTTAAACAAA
ATGTTTACTTAAACGATTCAAGTAAAGCAATACTCTGGCCAAAATGCGTC
AAAAATGCTTAGTAGATTCATTTTGTTACAAATCTCTCTTTTAATCGATA
TTTGGGATTACCCTTGAAGTTTCGcttcttaatcaagttttttcTACTTT
CAACTTTAATGACCTTTACAGCCATTGATATCGTCACAGAGCCAAGCTAT
CATGCGATATCCTGGTTCACCATCTGTAAACATTTGAATCGACCCAGAAT
AAGGCGCGATGAAAACTTTATAATGAAAAGTTGATTTCCGGGGTGAGCAA
TGTGTCAAGATGTCTTGTAATGTACTATATTAAAAGCTTCCCAACATATC
ACGGCCTACTCATTCTAAAGAGTCGTGACTATGTCAGTCAGGAACAATCA
ACTAATTAGGGCGTTGTCCTGGTAAGGACGGTGTAGATTAAGTCACCATT
TCGATGTCCTTATAGGGACGTTCTAAACTTTAATCTCATTTTCAGATGTT
TTAAAGCTAAAAGCGCATTCTAGAAGCCTTTACCAATGGAAAAAGAAACA
ACCTTAATTtgacaaattgaaaaaaaatcattaaaattgatCGGTGCGTT
ATTTCAGAATCTATCATTTACTGTGCACTTATTTCACCCTGCCACAACAA
GGCTACCATTATGAAATTTCTATGTTATCAGGCTCTGAATACATCAGAAT
TATTCGGTTTTTAGACATGTAAAAATATGGGCATTAAAGCCTTAAAGAAT
AATTAAAGATTCCATCAATGAAACCTTTTGAAACTCACTCTATGGAATCA
TTTTCTTGTACTCTTTCCAATTGTAGTGCTTAGAATTTGCGCCGCTTTCG
GCGTTTCAAGATATTAGCCCGGTGACTTATAAGgacatcaaaatcacttt
ataAGGACATTGGTGTCTcgaactcaaaattttagaaaaattaaaattac
ttcaacatacaaagttctaaaattttagagtaaGGTGCACCTAAAACAGT
CTGaaacagtttgtttgatactgtctgtgagtgaacccttgtttacaaaa
gcctaaaaattatACTAATAAGCACATTATAAACTCAACATTAAGCATCA
ATAAAAAATCTCTAATACTGTTAAAACTGTctaaaacaataataaaaagc
CAGCCTGCAATGTTTTGGTGTTCTTCATACTTCACAAAAAGttgttcaaa
taaaaaatttgttaTAATATGACGGATGGGTCTATcgaaaaaaccgcgaa
agtcTTAAAGAGCGGTTGGGCTCGCATCGACCAATAATCATTTGCATCCT
CAGATTTGGATACAAGTGATTCAGGGAAACCAGATCGTAAACAACagaca
aaaatataatttaatttaatttaatttttttttttaatttatagaagtgt
atttctcaggtctattgacctctatgaaacaatcttacatctttacaatt
tatagatcttatcattccattcgtttgtcaattctaaTTTCAATTTCCCT
ACGGACGGTGCATTTACAACATTGGTTGCCAAACCGTTCCAAGTATCAAT
GCTCCTATAGTAAAGTGAATTCGTTTGGTATCCTCTAATGCCGTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTACGC
CGGATCTTGAGGCTGGGTAGGTTCATGACTTGTAAACGTTCTTCATATGA
ATGGTTTCTATAACCACCGACAAGTCTTGTGGCCCTACGTTGGATACTTT
CAATTGCATCAGAGTGTTTGATCAGCCATGGAGACCAAAGGTGAGGTctc
acaaatgcaatgaaaagtgtGCGGTGCATCTTGGGAGAAAGGAAGTCGAA
GCTTCTGTTAATTAATCCAACGATCGAGTTAGCCTTCTTGATCTTGGTGT
AGATGTGTTCTTCGAAATTCAATTCACTATCAATAATCACTCCAACATCC
TTCTCTTGATCAAAATGTTCTAGGACAGAGCCAGCGATCTCATAAGGATG
TGCATGTTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCATCTTCAGcg
ttatttatttcttcaacaAGCTTTGTGTCATCGGCAAAGAGGAACATTTC
TGAGTTGGTAACTTCAGCtagatcattgatgtaaataacGAAACTaatag
actgtgaaatagtttatagtcaggatatccaggctaggtatAGCACTAAA
GGTTCATAACCCATTCCCGCAAAGGTCCACTAAGTATGCATACTGCCATG
AGGAGGGAAATGTCTATGTTACAGTGTTTCCGCTGctaaatattttaaga
aaatattttatattttgaccaattGAATAcctttcttttcaacttttagg
ccacctgaacattttttcctcagcggggataaaaattccaattgaaattc
aaatgggGATATAAGTTCTATTGTTCGAAGGGTAAAAAATCctgtgggga
tggttttggagtgtagTTTTTAACATTGATTTTCGGTtaggataaaatca
aagtcaatttcccagtgaggctgaaattcacaggtattttcctaccgggg
acgaaatttctCCCAAATGTTCcggtggggctggggtcccagcgggtttg
tgacacaggggtgcaCCTGAAGTTGATATTATTCATCTATTATTAGGGGG
GGGtccaaaaatgactttttttggaaattttgatgtttaaccatcttttt
taaattaatttttcatgcCNtccaaaaatgaaatgaaattttgatgttta
accatctttttaaaattaatttttcatgctgattccgaatttgaaaTCCG
TTTTTCCATATCTCTTACCTCTGGGCGGCTACCGGAGACCCTTTTTTCGG
AAAACCGCCCAAAACCGCTAAAAgtcaatgtttttgaaattttccatttt
gaatagctttctaatgatgtgatatcttttttaaatcagtttttcatgct
gattccgaatCTGAAATTCATTTTATCATAGCTCTCACCCTTGGCCTGGT
ATAGGAGGctgtttttttactaaaatcttGGAATCCAAGGAAAATAGATA
ActtgaaaatgtttgaatttgaatgaaaaatttaatgataacAACTTGTT
TTAGAtcaagttttcatgctgatttcaaatttcaaattagtttCTGCACA
TCTCCTGCCACTGACCTGCTACGGGGCCGGCTATATGAGGTTCTTTATTc
agaaaatattgcaaaaaatgtgcaAAAATCGATATTATTGAAAGGATATT
TCTAAGCTTTTAGTTCGTCTGTGGCTTTTTGACACTTGGCTAATGTTATA
CATTCATCGTCATAGGGTGTCTTGAGTACTTTATCTTTATCCAATGAGCT
ATACTGCTGTACTGCTGCTATGAATTTATCTGCTCAACTAGTCATGAAGC
AAAATTCAACCTGCTTAGAATCTCGTTTAAACTATCTTGAGCTAGTGAAC
TCCTTTCGAATACAATGATTCCCTAAATTAATTGAACATTGAAAAGTTGA
TAATTGTTTTAGGAAGCCTTAATCATTTAAGGGGtaagttaaaattaaaa
tcacTAGGCTAAGCTATCTCTTATACAGATAGCTAATATAtgggattttt
caaataattttaattcaaaCAAGGCATATAAGAACAGGTTTATAGTGAAT
TTATTGAAAGATACCAATGTTTAAGAAGTATAACCTATTCCTAAAAAGTA
ACTTCCAAACAAATGGACCAATATGAAAGCATTTACATGGTTTTAAGGGA
TGGATAAAACAATAGCGCCTTTCGATTGGTTCAATAAACAATTATTCGAA
TGTAGGATTTTTAGATTCTATTTATTCGGTATAAGGTCTATACATTCCTA
TGATTTTCATTGTAACTTAACCTTTCAAACAATGATATACAGCTTGTTAA
AACCAATATCAACTTTTGAATGTCCAATGCGGACGATCATTGCATTTGGA
AGAAGTTTACTAGCTCAAgatatttttaacaatttgaTTTTTACGTCTTT
GATTATATTCTAAGCAGACAAATTAAAAGCAGCTCAGTCCATAGGGTTGC
ATCATTGCATAAAGTGCTCAAAACTTTGTAACAAGGAATGTATAACCAGA
TGTTTTGATAAATGGAATCCAAGTACAAGAATCtccttcaaaaatattca
tttcagtacatttttgcgatattttcTGAATGAGGAACCTCATGTAGCCG
GCCCCGTAGCAGGCCATGGGTATGAGATATGCAAAAACTGATTTGGaatt
cggaatcagcatgaaaatctGATCTAAAACAAGTTGTtatatcattaaat
ttttcattcaaagttcattcaaattcaaacattttcaaattatcaatttt
ccttggattttcgaagattttagtaaaaaaacagCCTTCTATACCAGGCC
AAGGGTGAGAGCTatgacaaaatgaatttcagattcggaatcagcatgaa
aaactgatttaaaaaagatatcacatcactagaaagctattcaaaatgga
aaattttagagatatggaaaaacggatttcaaattcggaatcagcatgaa
aaattaatttaaaaaagatggttaaactcaaaaagtgtaATTTTGGACCC
CCCCTACTATAAtcttttttcgttatttttgtttagaataaataataaaa
attggCAAGTTATCACAAGTGAATGGACGATTCATGTTTCTAACAGTACG
TTTTCTAATCCCAAGTTCCTGTGGATGGAATGTTGAACATTTTTGTTTTA
TCTACATGGGTATCACTGATCATTACCCGAAATACGCCTTTTCAATAATC
GTTTCATTAAAAGTTAATCATTGAACGAATGATAATAATGCAATGATTTC
GATATGCGAGCGCTTCATCTCAAGGTTCAACCGTGGTCATTTTAATATca
gttcaaattttgaaaatgaacttACTAACGATCATATTGATCAGACCACA
AATTATTGCAATAGCATGACATTAACTAGGCTGATATCTATTACCTTACT
AATTGCAAAGCAATTTTCTTTCTTGAGACTTTAACAAAATATCTGGATTT
ATTctatacccgggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccg
gggggggggggtacttaggcaaaaatggatgatgggtatgtacGGACGGT
AAGGATCGGTTGCAAAAGTTGCAGATCAGCATGCAGATTGGTAATTGGTG
TAATCAGGATcaatttgaaatgattttgatgttATGATTAAATTAATTGC
TTAACAATAGTACAATCTTCAGCCATCATTAATTTGTTTTGGAACAAAAG
GGATGGTCAGAAATCACAACTCGTTTGTTCATTCGTCGTGGCATTGTGGT
GTTGGCTGTTCGTTCTTGGTAAGTTCTCTATTATTCTCTAATCACTCTCA
TAAACTGAAAATGTTTCCTCTGTCGAAAATGGTCATCAACTACACTCATT
ATCATAGCCTTTTTAAATTATCAGGGCTATCGATTGTACGTTAATGGTGA
TCATTCTAAAAATTCGAATGGATTCGACCATGCTGCATGCGATGAGTTTC
GACTTATGACGTCGTCGTTTCTTTAAATGTAATTCCAAGACAACCTAAAt
cagaagaaaatatttttagctaAAGCCATGAGAACactttgtaaatattt
cttggaGCACGGTGTGTCATGACAGTTTTCGAAAGGCTAGGTTTGAAATC
TCGAGTCTTCAAGAATTTTCAACTACAATACAACAGCTGTAGTtatgaaa
tggaaaattttattaaaggttttgtttttaaataagtctgatatcgtttg
cttactatactcatcaattttaattcacaagctttttcacgttggattga
catggatgtggagtaagattggccagaaagatgaaaagaaaaacatcttt
ttgcttatatcagcataacataacaaggactacactgtcctgatatgaaa
taagtgtctgatatgaaacggaaacacttctgtaaaaataaaacctttaa
tccgTTATGTTGAAGTCGAGAAAATTGgatgatgttttttttcaaagtct
aTAAAGTGAACTGTTTGTCTGGACATTATTTCCAAGTTGATTCTCCAGAT
CTTGATCTTAATCCTTTCCCTAAAAAGGAAGACTTAATTGGATAGAAAAC
ATCAGattaattgaaataaaaacattgtcAATTGACATTTGAGGCGTGTG
GAACCAAAATAAATCATTAAAGAACAACATAACATTTTAAGCTTTTGTGG
TCGAGGGTGgttaattaaaattgaaaaaaagcttCAATGACATGAACTTT
TGGCTTTAGTGAGATATTTGAATGAATATATTACACTCACTTTTTTGAAc
atttatttgattttcagttttagCATTTGAGACAAAATGTACCAAGCCTC
TTTGTTGTGGATTGCTTTCAACTTAGCGATCTGTTTCGCCGCAAATTTCG
AGTTGACGGTTTTACACACGAATGACGTACACGCGCATATCGAACAATTT
AACGTTTACGGTGGTACGTGTACTCCGGAAGACGCCGCTGGTAATAAATG
TTACGGCGGTGTAGCACGGAGACAAACAGTGATCGAAGAATTACGTAAGA
CCATCCCCAACACAATTCTTATTGATGGAGGTGATCAATTTGCTGGCACT
CTGTGGTTTACTATTTACAAAGGAAAAGCTGCTTTGAGATTCATGAATTA
CATCAAGTATGACGCAATGGTAGGTCCTATTTCTCCCTTTTTTAAGCTTA
TCCAAACTGCTCTTCTGTGGCAATTCTCTCCAGAATGTGCATCCTTTATC
TCTTCTTCCATCTCATAAATGGGCTCCAAGAGTCTTTAATGTCTAGACAA
GGGAAAAGACTTCAACCATAGCAGGAACTTTTAATCCACCAAAGTTATCT
TTTTACTATGTAGTGGGGGTTTAGAAATGATTCCCTATAGTCAACCTTGT
ACAATTATCTGGTGTAGATATTTTCTCTTATCACCTTACAAAAtactttt
acaatttttctgTTTACTACAGGCAATTGGTAACCACGAATTTGACAATG
GTGATCAAAACTTGATCGATTTCATGAAAAATACATCTTTCCCCATCGTT
TGCACAAATATGGATGTGTCCAAGCAAACGGATTGGCCAGATCCTCCAAT
TTATAAACCTTCCACAATTTTGGAAAGAGGAGGCAAGAAGATCGGTATCA
TTGGATACACAACTCCCGATATTACTTGGTATGTATTCATGAATatgaat
tttcgaattttttccgAAACTTGTATCTAGAGTCTTCATTTGAATTTTAA
CTCTTAAGAGAGTTCTcgggatttatttatttattttttatcaaactatt
gaaaatatCCGAAAAGCTGTTTTCCGGTTGTTGTTTTGACAAGTTATAAT
TTCTTAAGCTGAgaagatattcaaaatgaacCAACAATGGTGACGTTTTA
TTTTTGTGACAATAGAAATCTTAAACTGAGACATTCCTATTTTGTAGGCT
CTCAAAACCAGGCCCAAACATTAAATTCAGCGATCCTGTGGAGTCGGTCA
GAGCAGAAGCCCAGAAATTGAAAGCTCAGGGGGTCAATATTTTGATTGCA
TTGGGTCACGCTGGATATGCAAAGGATCAAGAAATAGCAAGATCAGTAAA
AGAACTTGACTTGGTTGTCGGAGGACACACAAACACCTTTTTGTGGAATG
GTAAGAAATctatttatttttactttttggtcccaaaaaattgttcaata
aatttaaagcattttttaaCCAAAAGGTAACGAATCTAGTCATTTTTTGA
GTTAGCTTTTGATCTTCCATGAAATCTTATTATTGTCAAAATTCATTAAA
TCTCATAATTTTCTCTTATTCAGGACCCCAACCATCAGTGGAGAAAGTGG
AAGGACCTTATCCATTCATGGCGCAACGAGATGATGGTACTGAATGTCCA
GTCGTCCAAGATTTCACTTACGGAAAATATTTGGGTAATTTGAAGTTGAC
TTTCGATGAAAATGGTAAATTGTTATCAGCTCAAGGAAATCCCATCATGT
TGAATGCTTCTTATGTTGAAGATGAGGAAGTTTTAAAAATGGTGGATGAA
ATGGACGACCCCATCATCAAAGCAAGAATGGTAATTGTTTTAAGATAAGC
TTTAGAAACGCAAAGAACAGGCTTTTAGAATCTgccaacttaaaaaaaaa
atcctcaaaTCTAGATTCATATTTAAAGTTTCCTTGTGAttatgaaacta
attttctttatttattatcaaaataaaaccaaataCACCCTCGTCCACGC
CTTACAGGTTAAGGAGATTCATACCCCTTAATACATCTTTTTTTATTAAG
GATCCCATTGGTCGTTCATATGTCCGTTTAGAAGGCGATCGCTCCATTTG
TCGTTTGAAGGAGTGCAACCTGGGAAATTTCTTCGCAGATGCTTTGGTTG
ACGCCCAAGTGAAAAATCCTTCCACAGAACAATGGGCTGAAACTGTTCTC
GCTATCTGGAATGGTGGTGGTATCAGATCTGGAAATATTGACAAAAGATT
TGATGGTAATTCTTTTAGTCCTGGAGAAAAGTTTTATTGCACCTTTACTT
CAACATCATATTGTACGGTTACTCTGATCTCAAACAAGATTGAATAAAAT
CTTGAAGTTTTTGTTCCTAACAGACCATGCGCTATCAATTTCTATCATTA
CATAAATAGTCTTCTATTTCACACATGCTTGAGCAAGGGAATTTATTTCA
GGTAAtgcatattttccaaattcTTTGTCAGATAAATCACGAAGTTGAAT
ATTTGCTACGGTATCCACGTAGAAACTTTACTACAACTTTTTAATAtctg
taaattttatttttttcgtttttcatacAGAGCAAATCAATAGAGAAGAT
CTCAGCACCATCAGTCCTTTCGGAAATACAGCTGACCTCATGGAAATCAA
AGGCAAATATCTACTTCAAGCATTTGAACATGGATTTTCTGGTATTGAAA
ACAACGAAGGACGATATCCCCAAGTATCAGGTATTAATTCCTCTCTTTTC
TTTGAAGGTACAGAATGACATTTACAGGTTAATAAGATAATGCACTAAGC
TGGATTATATCAACGAGTCTTTGATTTTGTCCAGACGTTTCTACTTGGTG
TCAAGAAAAAGAGAAGCTCAAATTATCAAGAAATAAGATAAGAAATTAAT
TATGTCCCGTTTCTTCATCctctttcatcttcattttaatcTTTATGATG
AATCGACTCAAGATTATCCTTTTCACAAGGTTACATTCGAGACCAATACA
ttgttctcaacatgttcttattttcaccattttgtgggtGTATTTGccca
tttccctaagaaatcgggtgttttagagtctgtaaagccttaacttgttc
ttaatacttCGGCCATCGTAGCCTAATATTCTTACAGAAAATACATGAAT
AGCAAAATgcaatcatagtataagaaagccgcggctggaatgataacatc
tgaatttctgttgctctatctctgtcgtatttgatgactatttgttgatc
aagaaatcagtaatgtagcatcttcgattgtaaattttattggtttgtcg
ttaatacttacttatCAGTGCGTTTtaaacattaatgatatgcccttgat
aatacagttgcattataaaatcattgtaaaggaaagatcaacaacaagaa
atttaaacaagcacaaaattgctgggctgaaagaactcaaatattaataa
agtgcctccgaatgccttcacaatatttcagtgaaatctttttaaaaatc
aatgaaaaagtacgtcaagataatactgtgaaaatttcaagccagcaccc
tcAAACCACCCCTagaatatgtccaaaattagttcaagtgttctattgga
tacagattcaaagatatttaccaataaaaaaactttttatgaaggaaaat
gagagaaaaatttcaaaaactatctaccaataataaactgagcatcttga
tgttcttataaagctcggagacagagatggaacagcaattaaataaaaag
acagtgcggtacatattccagccgcagctttcttatactatgatgcAATG
ACTGTCAAttaaaaaatagccaaaaactAAAGAATTCtcgtcatcaaaac
aaagtatTAATCCACTTACAAGCTAGAAGAGATCAAATTACTGCAACTTA
ATTTCTTCATCATTATGACCACACGTCTTACCGCAAAACTTAATTAAAGA
TGTTGATAGTGCAGAATCAGGCTTGAGAAGCAATTGATAAGCGTATTAGA
GAGTATGTAAACTCTACAGTGATGAATGTCATAAgtaaggtttatttttc
ttaggaTTTCGTGTCACCTACGATAAGACGAAGCCAGTTGGAAGTCGCTT
GATCAGAGTTTTAGCTTTATGTAACAAATGTCGCGTTCCTAAATACgaag
aaatcaaagaagaacaaatctataaggtttgtttattttttttactattG
TGCAGTGATCTCTGATTTAGGTTAGGGCATATTCCCATTTTTGGGAAGGT
GTatgtcttgtcttgtcttgttTATTTGCTACCATCTCCATTGAACGAAT
GAGAAAAATGGTTTGCCCTTGATTGACcctgaagaaaagaaaaaagacat
GATTTTTCGATTCTACTGTTTCGTAGTAACATCACCAACTGGGACTTGTA
GATCGTGAACAAAGTCCAGTCTAGCATCATACAACCTTACCCCGTGACCC
TCTCCTGCATTGTACAGAGCTGCTAAACTTTTCTGGTATTCtaaacaaga
aagcctaagcggTGTAAAGGCCCAGCAGCGTTGGTAGTGTCAACATATTT
TTCGTTGCAGAGTCGCCATAGAACTTAATTTGCAGGAGTGAATTTTTTCG
CATACGTCTGCATGCGCACAATAGAAAGTCAGATAATTCGATTTTTAACC
TAGACTCATCAATTGATTATTGCGCGCATGGGCCCTGACAAAGTCAAATC
TTTTCGACCAGTTGTGTTTTAAAGGCCTATTCCGTTGCGCCCTGGGCCAA
CTAAATCATCTATACACAAGTTATTTATGTGTTagttttttggatgtttt
tcatTTGTGGCGAATGTTTTCTTTCAGGTCGTTTCTTCGGATTATTTGAT
CAGTGGAGGTGATGGATACAGTATGTTTCTGAACAAAGAGAGTTCCACTA
AAGGTGAAGATGCACTGGAAGTGTTGGAGAAGTACTTCCAAAAGATGTCG
CCAGTCACCACCCCTGATGAAGGGCGGACAATTGAAGTCAGCACCAGCAA
GGATTACACCAAGACAGACGACGATTGTTCATCTGCATCCTTCATCTCGT
TCAACCCTATCTTCATTGTTGTCGTTTTGTTCATATCCTACTTTATTTAG
TGAATGAAGTATTCGGTCcttcaatattgaaatcatatgTAATACTTTAA
AtgtaatattttaaacaaacttGTGGATACTGTTCCTCTCCTAGATTCTC
ATGAAGCTATCTTTGAGCACACACCATGTGACAGACCCGGTggcactgga
aaattgactttggtgtCATCCCCATCTGAAATTCCATTGATAATAtcgca
ctccaaaaccatccatTCATTCTGGAGTTTTTAAGCTTGAAGCGAatgaa
tttctatccccattgtaAATTTGATCGAAATTATATCGCGATGAGCTCCA
CTGGGAGCACTGAGATAGAGATGTTTTAGTTATCGTCTCCATTTTACTTG
GAAGAAATTTATGTAAAATGTATGTCTATATATTGAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00053587-exon-scaffold_233-1491911889:887521..887772 | TCONS_00053587-exon-scaffold_233-1491911889:887521..887772 | Clytia hemisphaerica | exon |
TCONS_00053587-exon-scaffold_233-1510915933:887521..887772 | TCONS_00053587-exon-scaffold_233-1510915933:887521..887772 | Clytia hemisphaerica | exon |
TCONS_00053587-exon-scaffold_233-1575043694:887521..887772 | TCONS_00053587-exon-scaffold_233-1575043694:887521..887772 | Clytia hemisphaerica | exon |
TCONS_00053587-exon-scaffold_233-1491911889:887993..888197 | TCONS_00053587-exon-scaffold_233-1491911889:887993..888197 | Clytia hemisphaerica | exon |
TCONS_00053587-exon-scaffold_233-1510915933:887993..888197 | TCONS_00053587-exon-scaffold_233-1510915933:887993..888197 | Clytia hemisphaerica | exon |
TCONS_00053587-exon-scaffold_233-1575043694:887993..888197 | TCONS_00053587-exon-scaffold_233-1575043694:887993..888197 | Clytia hemisphaerica | exon |
TCONS_00053587-exon-scaffold_233-1491911889:888431..888529 | TCONS_00053587-exon-scaffold_233-1491911889:888431..888529 | Clytia hemisphaerica | exon |
TCONS_00053587-exon-scaffold_233-1510915933:888431..888529 | TCONS_00053587-exon-scaffold_233-1510915933:888431..888529 | Clytia hemisphaerica | exon |
TCONS_00053587-exon-scaffold_233-1575043694:888431..888529 | TCONS_00053587-exon-scaffold_233-1575043694:888431..888529 | Clytia hemisphaerica | exon |
TCONS_00053587-exon-scaffold_233-1491911889:904250..904300 | TCONS_00053587-exon-scaffold_233-1491911889:904250..904300 | Clytia hemisphaerica | exon |
TCONS_00053587-exon-scaffold_233-1510915933:904250..904300 | TCONS_00053587-exon-scaffold_233-1510915933:904250..904300 | Clytia hemisphaerica | exon |
TCONS_00053587-exon-scaffold_233-1575043694:904250..904300 | TCONS_00053587-exon-scaffold_233-1575043694:904250..904300 | Clytia hemisphaerica | exon |
TCONS_00053587-exon-scaffold_233-1491911889:905625..905746 | TCONS_00053587-exon-scaffold_233-1491911889:905625..905746 | Clytia hemisphaerica | exon |
TCONS_00053587-exon-scaffold_233-1510915933:905625..905746 | TCONS_00053587-exon-scaffold_233-1510915933:905625..905746 | Clytia hemisphaerica | exon |
TCONS_00053587-exon-scaffold_233-1575043694:905625..905746 | TCONS_00053587-exon-scaffold_233-1575043694:905625..905746 | Clytia hemisphaerica | exon |
TCONS_00053587-exon-scaffold_233-1491911889:906398..907058 | TCONS_00053587-exon-scaffold_233-1491911889:906398..907058 | Clytia hemisphaerica | exon |
TCONS_00053587-exon-scaffold_233-1510915933:906398..907058 | TCONS_00053587-exon-scaffold_233-1510915933:906398..907058 | Clytia hemisphaerica | exon |
TCONS_00053587-exon-scaffold_233-1575043694:906398..907058 | TCONS_00053587-exon-scaffold_233-1575043694:906398..907058 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_233 | supercontig | scaffold_233:887521..907058 + |
Blast
BLAST of TCONS_00053587 vs. Swiss-Prot (Human)
Match: 5NTD (5'-nucleotidase OS=Homo sapiens GN=NT5E PE=1 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 1.038e-58 Identity = 109/293 (37.20%), Postives = 168/293 (57.34%), Query Frame = 1
Query: 4 PSVEKVEGPYPFMAQRDDGTECPVVQDFTYGKYLGNLKLTFDENGKLLSAQGNPIMLNVSYAEDEEVLKMVDEMDDPIIKARMDPIGRSYVRLEGDRSICRLKECNLGNFFADALVDAQVKNPSTEQWAETVLAIWNGGGIRSGNIDRSFDADISREELNTISPFGNTADVMEIKGKYLLQAFEHGFSGIENNEGRYPQVSGFRVTYDKTKPVGSRLIRVLALCNKCRVPXXXXXXXXXXXXVVSSDYLISGGDGYSMFLNK-ESSTKGEDALEVLEKYFQKMSPVTTPDEGR 879
PS E G YPF+ DDG + PVVQ + +GKYLG LK+ FDE G ++S+ GNPI+LN S ED + +++ + +G++ V L+G CR +ECN+GN DA+++ +++ W + I NGGGIRS ID + I+ E L + PFG T D++++KG L +AFEH + G + QV G V YD ++ G R++++ LC KCRVP Y+ +K +++YKV+ ++L +GGDG+ M ++ G+ + V+ Y KM + EGR
Sbjct: 254 PSKEVPAGKYPFIVTSDDGRKVPVVQAYAFGKYLGYLKIEFDERGNVISSHGNPILLNSSIPEDPSIKADINKWRIKLDNYSTQELGKTIVYLDGSSQSCRFRECNMGNLICDAMINNNLRHTDEMFWNHVSMCILNGGGIRS-PIDERNNGTITWENLAAVLPFGGTFDLVQLKGSTLKKAFEHSVHRYGQSTGEFLQVGGIHVVYDLSRKPGDRVVKLDVLCTKCRVPSYDPLKMDEVYKVILPNFLANGGDGFQMIKDELLRHDSGDQDINVVSTYISKMKVIYPAVEGR 545
The following BLAST results are available for this feature:
|