TCONS_00054176 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054176
Unique NameTCONS_00054176
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2460

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054176 ID=TCONS_00054176|Name=TCONS_00054176|organism=Clytia hemisphaerica|type=transcript|length=2460bp
CTTGGGTGTCCGCTAGCGTGATTTTTCATCCATGTGCTAAACCAAGTTCT
TTTACAAATATTGCTGAACGGCTTGCTGTTGGAGGGAATCTTTGGTGTGT
AATTTGCTCTAAATTGCTcttaaattcaagaaaatacaaaaatggtCAAA
GCAAAGACAAAAACAATAAAGGCAGAGGAAATTCCAAAATCCAAGAAAGC
TAAAAAAGTTGAAACTGACTCTGACTCGTCATCTGAAGAAGAGGAAGAAG
TCAAAGTCGCACCAAAGAAGAATGGAAAAGTCAATGGTACAACCAAAAAG
CCTGTCAAAAAAGAAAGTTCATCAGAAGACAGTGACAGTAGTGAAGAAGA
AGCCAAACCAGCAAAGAAAAATGGAGTAGCAAATGGAAAAGCTAATGGGA
AGAAAGCCCCATCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAA
GAAGACAGTAGTGATGAAGAGGAAGAAAAACCCAAAGCTAAAGCAAAAGC
CCCGGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCAGAAGACAGTA
GTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGCTCCTGCCAAA
AAGAAAGCTGATTCCAGCTCTGAAGCAGAAAGTTCAGAAGAAGAGGAAGA
GAAACCTGCGAAAAAAGCACCAAAACGAAAGAAGGATTCCTCATCTGAAG
ATGAAAGTGAAGAAGAGGAACAGCCCAAAAAACaaaaagaagaaaagaaa
aatttgaaacgtAAAGCAGACGATTTGGGAGATGTCAATACACCAAAGAA
AGTAAAGGAAGCAACTTCTCTTTTCATTGGTGGTTTATCATACTACACAA
CTGAAGATGGACTTCGACAATTTTTCGCAGATAACGAAATTAATCTTACT
AATTGCCGTATTATTACTGATCGTGAAACAGGAAAATCAAGAGGATTTGG
ATACGCTGATTTTGACAGCCAAGAAGAAGCAGATAAATGTTATAAAATTG
AGGACACTACTTTAGACGAACGTCAATTACGCTTTGATGCCTCTAATAGT
GGAGCTAAAACGCCGGGTAGTGGTCGTGGTGGACGTGGAGACCGCAGAGG
TGGTGGTTTCTCAGCTAATCGCAGTGGTGGTCGTGGCGGCCGCGGAGGAT
TCAACCGAGATAACGAAACCCCAACAAAATTATTACTTGTGAAAAATCTC
TCATATGACACTTATAATGAATCTTTGATGAGTAAATTTAGTGGCGCTAA
TGATGCTCGAGTTGTTAAAGACCAAGATGGAAATTCTAGAGGTTTCGCTT
TTGTTGAATACGATTCAATCGACGACGCAAAAGCAGCTCACAAAAGGATG
TCCGGTAAAGATGTTGATGGACGTTCTGTAACAATCGTTTATGCTACACC
AAGAGAAGATTTCAAACCAGGTAGTGGTCGTGGAGGACGAGGTGGTGGAT
TCGGCAGCGGTGGCGGCCGTGGAGGTGGCCGTGGACGTGGTGGATTCGGC
GGCGGTCGAGGTGGTCGCGGGGGCGGCCGTGGAGGTCGTGGTGGAAGTAC
ACCATCAAACAAAGGAAGCATCCAAAAATTCGAAGGCTCCAAACTGACAT
TCGATAATGATTCAGATTAAAGAAACAGACAGAATGATAAGAGATTGTCG
TCGTTATTAACGTATAGAGAGGATCGGGATGATCTCTCTTAACGGCTGCT
GGCTGGCCCTCAGGTTTCCCTTCTTCGAACACTTGATGAAACTTTTACGA
GGAACTCCTCTGTAAATAAACGAGCTCAACTAATTAGCTTGCTTGAAACA
ATGATGAACGTTGCGTGTTTGTATTGCAATGTACTTATTTGGTTTATGAT
TCTATTTGAAGGTGCGCGGGCTGACTCCCATTCCTTGCTGTCTTACAAAT
ATATAACTTGCCGAAAAAGCTCCTTGTGGTCCGTTacgaagttttgaaaa
aacaaaatctaGCTAGCAAAAATTATTCTCATTAAATTTGTGTGCTTACC
ATATATTGACATTGAAAGTCAACAATTCTTTACATTAAGACTCATTGAtc
acatttttatttcatcctATGTGCGTATTAATACCTTCAAACGGGCTATA
ATAAATAACAAtacattatttttttgtatttttttcatggTTTTCAATTG
GCTTGGAAacttttataaacaaaacttttacAGGACATAATACTTTAtta
tacatttttaatttttgtcattttttggtaaaaaagacATCGGATATACG
GACAGTGGTAAATAAAAGATTACGTTTTCTGAACACTCCACTCCCTTCAA
AATGCagtacatgtttttataagcatatcttaGGCTCAGATATTgggaaa
attaagcatatgtcTTGAGGAAATTGATCTacttaaaagaaatactttgt
TGGAAGGATAATTTTAAGTAAATGATttcaaagctttaaaaaaaattcga
taTAATGgag
Run BLAST on NCBI

transcript from alignment at scaffold_242:69517..80810+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054176 ID=TCONS_00054176|Name=TCONS_00054176|organism=Clytia hemisphaerica|type=transcript|length=11294bp|location=Sequence derived from alignment at scaffold_242:69517..80810+ (Clytia hemisphaerica)
CTTGGGTGTCCGCTAGCGTGATTTTTCATCCATGTGCTAAACCAAGTTCT TTTACAAATATTGCTGAACGGCTTGCTGTTGGAGGGAATCTTTGGTGTGT AATTTGCTCTAAATTGCTcttaaattcaagaaaatacaaaaatggtCAAA GCAAAGACAAAAACAATAAAGGCAGAGGAAATTCCAAAATCCAAGAAAGC TAAAAAAGTTGAAACTGACTCTGACTCGTCATCTGAAGAAGAGGAAGAAG TCAAAGTCGCACCAAAGAAGAATGGAAAAGTCAATGGTATGTTTTTTACA TTAGATTAgacatttgatattttatgcCTAACATCAGAGTAACTGGGATA GGAAAAATACAGTGGGTCTCAGGGAAGTTTAGGAAAAAGTAGCTGTAACA AAAATGACTATGCTATCAACTTTGTTGGAATTTCACAATTTGTAAGCTTG TAAGGCTTGTAAGACCCTCAAGGATACCTGGTGTAGGCGAATAGGTAGAT AAGGGGCATTTGACTGCCTGGATGCAACTGGAAAGATCCAGGCGTTCTGT GGGATCCTAGGATTGTGGGGAAGCATCTGCCTTTAAAAAACAGAGGCGCA CTGATATGTCTCTAAACAAGTCCAGGTCCCATGAGTCCAATCCAAGActg tttgaaatttattttaaatttcctATTTGGAGTTACCAAAATTCTTTATG AAAATCATTTAACACAAAActtgatcaaatttaaaatgtaaaagCAGCAA ATATATATACAGAATAGAACAGAAAAATGAAGTGACTGCTTTTGTAGAAG CGGTTGTTGTGTAGCGCTTTGTAAggcaaaaaatctttgaaaattgcaga taaaatctttaaaaaaacacTTGATGATCAAGAGGCTGGCTACGTTGAAT CTACAAAATTATTTGGATAGTATTGCCAAAAAATCTGACAAATATTACGA CTAGAAAAGGGTCAGATTTTTAAGATAGAGCGTGAGCGAGTTGGAGGACT TGAACCAACTTATTTGTGACCCAGGCCTAGCTCAACAAAACCATGTCCCA ATCAAAGATAAAGAAGAGGAATGTGGAATTATTTCTGCATTTCGATCAGC TATCGAAACATAGAACTATTTCTTTAATGTGGTTTAAATTGTTTTTagta tttacattttttgtgaaatttctagCTTCCATTTGAAAAAGGATATCATT TTTTTTTGAGTCACAAAAGATACGGAAATTACTACATAGCAGTCAGCTGT AAATAATTGGAAATAAAgttaattaaattttcaaaatgatttagGTACAA CCAAAAAGCCTGTCAAAAAAGAAAGTTCATCAGAAGACAGTGACAGTAGT GAAGAAGAAGCCAAACCAGCAAAGAAAAATGGAGTAGCAAATGGAAAAGC TAATGGGAAGAAAGGTAAAATTTTCAGTTACAGTACACATTgctatatca attttttttaaatatatcatTTAGTAAGATTTTGCTGAGGCTTGgctttt cttatatttttggcCCTTTAAGCCTCAAATTTTTCTTATCCTGTTCTCAT ggggtgtaattgaggtataTCAAgcattatacccaatttttactactttg accccaaaattagtatttttctTAAATATTCTAATGCTtcggcgattttg agcctcaaagtgtataccttattacacaaatattactagtATTTTATTAA CACAAATTGAAAAGTTTCATGTTAATAAAAACCAGCCGTGATGTCCTTGa agaagcaaataaaatttgtgttaattttttgcgtgttaatttcaaggtcA TTGAATACTTTCCTCGTAATATTTGTGCAATAAGGTAATTAtattatttt ctggtttacagacattatgaggaaaagttttggacaggaggatggaaaaa aaaataaaaataaaattaatgttttaaatttttttttagtttctttttaa aaatctgaattcaaaggaaataataaaataaaattttacgaaatttccTA AAGTatcaaatttttagatttaaagacaaaagaatAAAGTGCAAGATGTT GTGTAGATTAGTTTTAGATACGCATCTACggataaaaacataaaaaatgt acACATAAAGACTGATATGTGTTTATGTAAGACTGAcgtaggttcccact taggttcccccatcccacttctGGTATGCCTATTTTTCTATCTACTCTTG AATTTTAACAATCACATAAAGGACCCTGAATAAAAGCaattacaataaaa aatcaactgcGTAACACAAGAGTTGtataatttagtttttttttatttac ttgcCTAAACCTGGAAAGTAAgacagaaaaaattaaattaaaaattaaaa aaattaaaaattgatagATATCTCATATAATACTCAGTACTGGGCAATAC CTAGTTAATTTAACATATGGGGTATATTTTGgggcaaaaatttaattttt gacaaTCTAATTTCACTTATTGGATTTTGAGGAAAGTTAGCTAAAATGTT TGTTTTAACCTACAGCACCAGCAAAGAAAGAATCAAGCTCAGAAGAAAGC AGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCTGGTAAAAAGTTTAA agcctttaaattgagaaaatgcaGATTACACACACAGATCTAGGGGGTTT AAAAGATCTTTGTGAAactaaaaaatttttgggggattttttttcattca acaaccaaatttagaaaattagtATTAATAACATTATTTTGGAATAACAG ACATGAAGACAATCCCATCTTAGTCTTCTCAGGACAAATACAGCATTTTC TAGAGCACAATGTTGGTTTTACTACACaaataatcatatttttcttcttt ttttgtcaaACTGATACTTTACCTTTACTGCGTTTTTGCATAATCAAAGA TAGAAGtgcttttttgagagaaaaaaacagttttgaaaactaattttagG TTTTAGTACTGCCACTTGTAGACCTTaagtagtaagtctgcgaccgcagt cggaggcgacccgaaggctcctctttcgatagctgtctacccgaaggtag gggagggcgccactctttctcNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNggttttttcacctttcaaagtctctctaagggtcggaaaaatc agaaagttttaaattagtctctctaagggtcggaaaattcaggaatttta tgaaattttttgatttccagagaaaaagttgtaataaagtctctctaagg gtatgacttttttcaaaaatcgaaaaaaaacattcaaagagtctctctaa gggtcaccttttcagcaaaaatcagtctctttaagggttgGTTTTCAGAG GTCCCATTCgtacatacccctcattcgccaaccctagtaccccccggatg aacgttatgtacagaaaaattttatcaCAACTAAAAAAGTTCTAAGATCT GCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGTATCTGGa tcctgaccccccccctgaccAAAAAGGGTACTTTTTGTAGTGTTTTACCA CCAAAAAGGCTGTGTTAAATATATAAAGAAAGCAGTCATAAATAGTAAAA AATTTATAAGTGATAACAAAACAGGCCATGTCTTAGAAAGGTAGCGTCCA TTGGTGACCAAAAAGGGTACTTTTTGTAGTGTTTTACCACCAAAAAGGCT GTGTTTAGTGAAAGGGGCAGGATCAGTTAATAAGTGGGCGCTAAAAAAGG GCATTAAAAATGGTCAGACAACAGAACACATAATTGTTCTGGGTTTCGTC GCTCAAATTGAATTGATAAAGAGGGCGAAATGTTATCAAGATATTCTATG TTTCTTTTAAGTGCATTCTAGACTACTCTTACTTTTGCGGGCAGTGCAAA ATGTTGTGTGGATATTTCTCAATGGTGTGTGATATGCTTGTTTACCAGAT TTGTCTTATCTAACAACTTTTTTGATTCAGCCCCATCTAAGAAAGTAGCA GCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTAGTGATGAAGAGGAAGA AAAACCCAAAGCTAAAGCAAAAGGTACAAATTAATGCAGTGATCTCCTTT AatgtttgaaaatctctttcaTATCATGTGATGCtgcaaaattttgaaga ttaatTTTCACATCTAGATTGGGTTATATAACAAGAAAACATGAGTTAAT ACCTGCCTTATGGATCATATGGAACAGTGTTGTTGGGCCTCCTAAAGTTT CCTGAATTGTCCTAAATTTTGAAGCCATCTAAAATCTCCTTTGAAGGTGA AATTTTGAACATACAAGTTTCAGAAATTTGATTGTGTTTAAACAGTAATA AATGCAAGCAAAtctctttgattctttttagCTCCAGCCAAGAAAGCACC AGCTAAGAAAGAATCAAGCTCGGAAGAAGATAGCAGTGATGAAGAGGAAG AAAAACCAAAAGCTAAAGCAAAAGGTATGATTATGTTGTTTTGGTAAGAA ACTAACTTTGACCTCTATTTCATATAATTGATCCTGGTACATCACAAATG ACTCTTTTGCTTAAGTTTCTGTCACAACAAACTTTGGATTTAGACACTTA AAGTTTTGACACTCACATGACTGATTAATATTAAagtttccattttcatt ttaatcCATTAACATCTCTTTCAGCTGAAAGCCGAAAGTCTGAGATAGCc ttgtccaaattttcgtaatCTTACTAAAACATTGCATTTTTTAGCCCCGG CCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCAGAAGACAGTAGTGAT GAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGGTATAATGATCTTATT TCATATATAGGTAGTGGTTACTTTTTAAAGGATAGGTTCTACAGTTCAAT ATTCTTAGTACGCAGCTGTGTATTGCTTCAACATCTGATTGTACAGATTT TTctccaaatttaaatttctacAATTTTGAAATGAAGTTAAAGAAATTTG TTCCCTTGATGTTTTGAAGGTCTATCTGAAATAAAAAGCTTTGCTTTGAG CATTGCAATTTTCAAATCTTGGTTCAATTTTTTTAAGCTCCAGCTAAGAA AGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTAGTGATGAAG AGGAAGAAAAACCAAAAGCTAAACCTGGTAAATAGTTTGAAACATGCCAA AGATTTATGAAACTCTAccatttaaagggataatcagatgggttgagatt tttttgtttttactaaaagtcaaaaacttctTGTAACATAATTACCTTTG CTTTAGAAATACTtaattaaaaagattttgagGTTTGCTTAGGAAAATAG AAGGATTCCGCATACCAAATATCCCAAACCCATAGTGTGCAGTGgggtct gacccccccccccccccttttNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNccccccccccccatttataTTTCATTCCC CCTATATTTGCATTGGTTGGCAAAcaatatcatactccaggatgcaagtc TCAAATTTTCAATCCGTTGGTGGCTAAATAGGGCATTTTTTCCTAAGTTg ttccactaaaaaggctgtttttaccaatattttagtaatttcaggaGGGG AAGCGGCTGATAACCAGACGCTTAAAGGGCATAAAAAATGGCCTGATAGA AAATAAGGGGAAATAAGAGAGAGCAGACCACTTTTCATACCATTCAAGCA TCTTGTAATATGATGCTGTCCCTATGAGAACGTTAAAATTATTGTGAAAA CATCCCTTTTAAGTTTTacaggaaaaaatgtttcaaattgtCATTTAAGC TTAAAATATGGAATTTTGGCTTTAGTGAGCATGCATTTGGTGAACctaat tttgcagaatttaatttcgcggttttagacAAACACACAAATATTCTCAT GAATAAAGAATAACctataaaattggtctttttaggcaATAAAGgacata ttttaaacaaaacatCCTCTCAACCGCAAAATTATATTCTGCAAAACTtc cgaattttgagctgtgaaccaCTAAATGAAATCCCGTGAAAATATCTTCC CTCAAGTTCATATCAAATGCTTATTCTTTTTTAATTCAGCCCCAGCTAAG AAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTGATGATGA AGAGGAAGAAAAACCTAAAGCTAAAGCAAAAGGTACAAACCGAGGAAGTC ctgttttgtaatattttgataaagaaaCCAAAGTTTTCTTGTTGTCACTT TTGTGACTTCTGAATTGTAGGTTTAGTTTCAGCTGATTTTATATTATGAT TTAATATTTAGCTCCTGCCAAAAAGAAAGCTGATTCCAGCTCTGAAGCAG AAAGTTCAGAAGAAGAGGAAGAGAAACCTGCGAAAAAAGGTAATTTCATT AATATCCttggtctttattttattattagtgaggttaagtaaatcagtaa aatcacgacgacgaacgaaaatttaaaatttctttcaaccaatcaaaagt AATTAGCTGATTTATTTTAGCCCCACGTTAAGTGATAGCTCCcaagtaca taggtccccccaaaaaagtggtgtTCTTCCAGGCCCCTCCGTTGGGAAAA ATTTCACAACCAGcagggggctgacgctatgaaGTGNAAAAAAGTGGTGT TCTTCCAGCCCCCTCAAAAAAGTGGTGTTCTTCCAGCCCCCTCCGTTGGG AAAAATTTCACAACCAGcagggggctgacgctatgaaGTGTTTGCTTCTG TGGTGTGGGAGAGGGCTGCTTTAACATCATGCTTTGTCATTATAAGCATG CTGTCTTAATTTATGGTGTGCTGTTTAAGTGGAGGCATGCGTGTCACATC AAATGATTCAACatgagaaaaaaaacgaaattctATCTTTTTTAAGCACC AAAACGAAAGAAGGATTCCTCATCTGAAGATGAAAGTGAAGAAGAGGAAC AGCCCAAAAAACGTACGTAATATGTCTTTAACTTAAGtgttttttcagat ttggtTCATTTTCACCGGCTCATTTTCATGTTGAGTGACCAAGGCTTTTC TCAGGTCACGAGCTCCCCAGCATGTATTCTGCAATGCTTGGGTCATATCA CCAGAATGTAATATTTCTAAAACTTGCCAACGATTTTAAGAACTTTTACG ACCTTTTATTATcatagaaaaagaagaaaagaaaaatttgaaacgtAAAG CAGACGATTTGGGAGATGTCAATACACCAAAGAAAGTAAAGGAAGCAACT TCTCTTTTCATTGGTGGTTTATCATACTACACAACTGAAGATGGACTTCG ACAATTTTTCGCAGATAACGAAATTAATCTTACTAATTGCCGTATTATTA CTGATCGTGAAACAGGAAAATCAAGAGGATTTGGATACGCTGATTTTGAC AGCCAAGAAGAAGCAGATAAATGTTATAAAATTGAGGACACTACTTTAGA CGAACGTCAATTACGCTTTGATGCCTCTAATAGTGGAGCTAAAACGCCGG GTAGTGGTCGTGGTGGACGTGGAGACCGCAGAGGTGGTGGTTTCTCAGCT AATCGCAGTGGTGGTCGTGGCGGCCGCGGAGGATTCAACCGAGATAACGA AACCCCAACAAAATTATTACTTGTGAAAAATCTCTCATATGACACTTATA ATGAATCTTTGATGAGTAAATTTAGTGGCGCTAATGATGCTCGAGTTGTT AAAGACCAAGATGGAAATTCTAGAGGTTTCGCTTTTGTTGAATACGATTC AATCGACGACGCAAAAGCAGCTCACAAAAGGATGTCCGGTAAAGATGTTG ATGGACGTTCTGTAACAATCGTTTATGCTACACCAAGAGAAGATTTCAAA CCAGGTAGTGGTCGTGGAGGACGAGGTGGTGGATTCGGCAGCGGTGGCGG CCGTGGAGGTGGCCGTGGACGTGGTGGATTCGGCGGCGGTCGAGGTGGTC GCGGGGGCGGCCGTGGAGGTCGTGGTGGAAGTACACCATCAAACAAAGGA AGCATCCAAAAATTCGAAGGCTCCAAACTGACATTCGATAATGATTCAGA TTAAAGAAACAGACAGAATGATAAGAGATTGTCGTCGTTATTAACGTATA GAGAGGATCGGGATGATCTCTCTTAACGGCTGCTGGCTGGCCCTCAGGTT TCCCTTCTTCGAACACTTGATGAAACTTTTACGAGGAACTCCTCTGTAAA TAAACGAGCTCAACTAATTAGCTTGCTTGAAACAATGATGAACGTTGCGT GTTTGTATTGCAATGTACTTATTTGGTTTATGATTCTATTTGAAGGTGCG CGGGCTGACTCCCATTCCTTGCTGTCTTACAAATATATAACTTGCCGAAA AAGCTCCTTGTGGTCCGTTacgaagttttgaaaaaacaaaatctaGCTAG CAAAAATTATTCTCATTAAATTTGTGTGCTTACCATATATTGACATTGAA AGTCAACAATTCTTTACATTAAGACTCATTGAtcacatttttatttcatc ctATGTGCGTATTAATACCTTCAAACGGGCTATAATAAATAACAAtacat tatttttttgtatttttttcatggTTTTCAATTGGCTTGGAAacttttat aaacaaaacttttacAGGACATAATACTTTAttatacatttttaattttt gtcattttttggtaaaaaagacATCGGATATACGGACAGTGGTAAATAAA AGATTACGTTTTCTGAACACTCCACTCCCTTCAAAATGCagtacatgttt ttataagcatatcttaGGCTCAGATATTgggaaaattaagcatatgtcTT GAGGAAATTGATCTacttaaaagaaatactttgtTGGAAGGATAATTTTA AGTAAATGATttcaaagctttaaaaaaaattcgataTAATGgag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034176XLOC_034176Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054176-exon-scaffold_242-1491911889:69517..69802TCONS_00054176-exon-scaffold_242-1491911889:69517..69802Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1510915933:69517..69802TCONS_00054176-exon-scaffold_242-1510915933:69517..69802Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1575043694:69517..69802TCONS_00054176-exon-scaffold_242-1575043694:69517..69802Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1491911889:70811..70930TCONS_00054176-exon-scaffold_242-1491911889:70811..70930Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1510915933:70811..70930TCONS_00054176-exon-scaffold_242-1510915933:70811..70930Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1575043694:70811..70930TCONS_00054176-exon-scaffold_242-1575043694:70811..70930Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1491911889:75797..75889TCONS_00054176-exon-scaffold_242-1491911889:75797..75889Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1510915933:75797..75889TCONS_00054176-exon-scaffold_242-1510915933:75797..75889Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1575043694:75797..75889TCONS_00054176-exon-scaffold_242-1575043694:75797..75889Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1491911889:76561..76650TCONS_00054176-exon-scaffold_242-1491911889:76561..76650Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1510915933:76561..76650TCONS_00054176-exon-scaffold_242-1510915933:76561..76650Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1575043694:76561..76650TCONS_00054176-exon-scaffold_242-1575043694:76561..76650Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1491911889:78228..78305TCONS_00054176-exon-scaffold_242-1491911889:78228..78305Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1510915933:78228..78305TCONS_00054176-exon-scaffold_242-1510915933:78228..78305Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1575043694:78228..78305TCONS_00054176-exon-scaffold_242-1575043694:78228..78305Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1491911889:78813..78878TCONS_00054176-exon-scaffold_242-1491911889:78813..78878Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1510915933:78813..78878TCONS_00054176-exon-scaffold_242-1510915933:78813..78878Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1575043694:78813..78878TCONS_00054176-exon-scaffold_242-1575043694:78813..78878Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1491911889:79084..80810TCONS_00054176-exon-scaffold_242-1491911889:79084..80810Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1510915933:79084..80810TCONS_00054176-exon-scaffold_242-1510915933:79084..80810Clytia hemisphaericaexon
TCONS_00054176-exon-scaffold_242-1575043694:79084..80810TCONS_00054176-exon-scaffold_242-1575043694:79084..80810Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:69517..80810 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054176 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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