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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054780 ID=TCONS_00054780|Name=TCONS_00054780|organism=Clytia hemisphaerica|type=transcript|length=1307bp
CTACAGGCAACTAATAATTACAGTGCTAATAATAGCAATCTTGAAAGGAG
GTATACTTAGACAGATCTCGATAAATTACGTTTCTATCTTAATTGTAATT
AGATTATGAGATGATGAGAAAAATGTCTCCTTTCGTAAATTGTGCTAAGC
TGCAATCAGTGGACTGACACCACCGTCTCTTAtattgtttgtttacattt
ttaccTGGACGGTGAAAACGTCATCCGAACGTTTCTGTAAACATTAATGC
CTTTAACTCCCCCGTCCTTCTTACCCCTATTTCCAGCATTACCTTTGCCA
ATGTCAAAACAAACCCACATCTTTTGCTTTGTGTTGTCTTTCTACAGATA
TGCGAGGAATTATTGGACCATTGTTTGGCGCCCGATTGCCAAATGGGAGG
ACTGGGTTGCGATAATATGACGGCTGTATTAGTTTGTCTTTTGAATGAAC
AATCCTATGAGGAATTAGCTGAGAAATGCTCTACGCCAGTGCGACCAGAG
ATCTTAGAGAAATATAATAGTGAACATGGTTCGGATACTGGTGTGGTCAC
ACCTCCTTCAACTGACGAACAAGAAGATAGTAAACCAAATGGAGAGGGAG
AGGAAGAAACACTCCCCtccaatgaagatgaagaacaGGAGAGTGGTCAA
ATGGACGAAGNAGGAGAGGAAGAAACACTTCCCtccaatgaagatgaaga
acaGGAGAGTGGTCAAATGGACgaagaagaaatgaatttaACGTAGTACG
TTCGTCCAATACTTTTTCGCTTCATGCAATCAACCAATCACTTAATTCTT
CTTTGGCGCCACTTGTTCAAAGGGCAGCTCGTTTAGATATGAATATTGTT
TTAAAAGCACTGTTATTATCGTGTATACTCCAAGTATATACCATGTTCCA
AAAAAACTGTTCGTAATTTTGCATTGTTTCTTTAggaaaaaacatgtttt
tttattgataaattaATTCCCAATTAATAAATTTCTGTTTTATTTCATGT
TAtaaattatgtcatttttatactttttggtaAACATTTTCATATTGATT
TTAAAACAATTACAAAACTTAAGTTTCTGCAGTTTCTTCAGTTGAGATGC
TAGCTGTGATCTCGTATTGCTCCAGATTCACCTCACAGAGTTTTACATTC
AATCATCCAACAATACCATCTCGATAATTTTGTTAAAGCTCTTTGTTGAT
GTTTTGTGTAATTTTCTCCTCATTCATGTTGACATAAAGAAATGAAAGTT
GAGTGATTTTATTTGACTCTTGTGTTATATTATGTTGTCTACCCCTCTTT
GATAAGG Run BLAST on NCBI transcript from alignment at scaffold_245:469297..470603+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054780 ID=TCONS_00054780|Name=TCONS_00054780|organism=Clytia hemisphaerica|type=transcript|length=1307bp|location=Sequence derived from alignment at scaffold_245:469297..470603+ (Clytia hemisphaerica)
CTACAGGCAACTAATAATTACAGTGCTAATAATAGCAATCTTGAAAGGAG
GTATACTTAGACAGATCTCGATAAATTACGTTTCTATCTTAATTGTAATT
AGATTATGAGATGATGAGAAAAATGTCTCCTTTCGTAAATTGTGCTAAGC
TGCAATCAGTGGACTGACACCACCGTCTCTTAtattgtttgtttacattt
ttaccTGGACGGTGAAAACGTCATCCGAACGTTTCTGTAAACATTAATGC
CTTTAACTCCCCCGTCCTTCTTACCCCTATTTCCAGCATTACCTTTGCCA
ATGTCAAAACAAACCCACATCTTTTGCTTTGTGTTGTCTTTCTACAGATA
TGCGAGGAATTATTGGACCATTGTTTGGCGCCCGATTGCCAAATGGGAGG
ACTGGGTTGCGATAATATGACGGCTGTATTAGTTTGTCTTTTGAATGAAC
AATCCTATGAGGAATTAGCTGAGAAATGCTCTACGCCAGTGCGACCAGAG
ATCTTAGAGAAATATAATAGTGAACATGGTTCGGATACTGGTGTGGTCAC
ACCTCCTTCAACTGACGAACAAGAAGATAGTAAACCAAATGGAGAGGGAG
AGGAAGAAACACTCCCCtccaatgaagatgaagaacaGGAGAGTGGTCAA
ATGGACGAAGNAGGAGAGGAAGAAACACTTCCCtccaatgaagatgaaga
acaGGAGAGTGGTCAAATGGACgaagaagaaatgaatttaACGTAGTACG
TTCGTCCAATACTTTTTCGCTTCATGCAATCAACCAATCACTTAATTCTT
CTTTGGCGCCACTTGTTCAAAGGGCAGCTCGTTTAGATATGAATATTGTT
TTAAAAGCACTGTTATTATCGTGTATACTCCAAGTATATACCATGTTCCA
AAAAAACTGTTCGTAATTTTGCATTGTTTCTTTAggaaaaaacatgtttt
tttattgataaattaATTCCCAATTAATAAATTTCTGTTTTATTTCATGT
TAtaaattatgtcatttttatactttttggtaAACATTTTCATATTGATT
TTAAAACAATTACAAAACTTAAGTTTCTGCAGTTTCTTCAGTTGAGATGC
TAGCTGTGATCTCGTATTGCTCCAGATTCACCTCACAGAGTTTTACATTC
AATCATCCAACAATACCATCTCGATAATTTTGTTAAAGCTCTTTGTTGAT
GTTTTGTGTAATTTTCTCCTCATTCATGTTGACATAAAGAAATGAAAGTT
GAGTGATTTTATTTGACTCTTGTGTTATATTATGTTGTCTACCCCTCTTT
GATAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054780-exon-scaffold_245-1491911889:469297..470603 | TCONS_00054780-exon-scaffold_245-1491911889:469297..470603 | Clytia hemisphaerica | exon |
| TCONS_00054780-exon-scaffold_245-1510915933:469297..470603 | TCONS_00054780-exon-scaffold_245-1510915933:469297..470603 | Clytia hemisphaerica | exon |
| TCONS_00054780-exon-scaffold_245-1575043694:469297..470603 | TCONS_00054780-exon-scaffold_245-1575043694:469297..470603 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_245 | supercontig | scaffold_245:469297..470603 + |
Blast
The following BLAST results are available for this feature:
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