TCONS_00054905 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054905
Unique NameTCONS_00054905
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3259

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054905 ID=TCONS_00054905|Name=TCONS_00054905|organism=Clytia hemisphaerica|type=transcript|length=3259bp
AGGCTTTTGTTTTAACTTATTCAATTTGAAAACGCTCGTACCCAGACCTG
ATGGAGGGGAAGCgactttcaaaatggcggatacGTAAGCTGAAAACTTG
TTGGAAAAATGAAACTGAGCTTGAAAACATTGGGTTTCTACTTAAAATAA
TGAGGATTTTTTAATGAATCAtttaatttaaattattttacagctgaaat
aaaaaaataaatgaaatatttaCGTAATGACTGGGTCAAATTGTTCTATT
GTGGGTTGTACCACTAACAGGAACACTCACAAGGACCTCTCAATATTTCG
TTTACCAAGTTTGAAGACTGAAAATCCAAGACGATTGAGTTGGAGAAAAG
AGTGGTTACATATCATCTTAAAGGACCGTGTTTTAGATAATAAACTCCAA
AAACAGATTGATAAAAACAATGTTTATGTTTGTGAAAAGCACTTCAAAGT
GGAAGACTTGTTACAATATGCAGCCAAAAAAGAAGTACGAGAATTCTGCT
TGCCGACTGAAAATCTTCCGAAGAAGCACCTTGATCTACATGAAGTATCA
AGACCAACATCAAGCAtcgaaaaaagagaaatttttcaacaaaagaaagc
aAAACACGATATTCCAAAACCAAATTGCTACAAAAGCTTCAAAGACTTTT
TAGATAGAATTCAGAGGCTAAGTCTCAAAGGATGGACTATTGTTAACAAT
CATCTTGGATTTgtggaaatcagaaagaatTTACCTGAATACCTTggtcc
aaaatttcaaatttttgtgaaagaagaTCTGACTTTCAGACTTCGAATCC
ATGGCTGGATGTTGTCTTTGGAATCTGAGTTTATGAAAACCTACAATTCA
ATGCAGAGCGTAACTTTGAGTTATTTGATCactattttggaaaaatacCA
ACTTTGTCAAGctGTTGATCTGGTTGAATTCAAAGAGGCAGTCAACTTGC
AACATCACATGGTACAAAAAGCATTTGATTTCAGAGATAATCCACCAGAG
AATTTAGNGATCTGGTTGAATTCAAAGAGGCAGTCAACTTGCAACATCAC
ATGGTACAAAAAGCATTTGATTTCAGAGATAATCCACCAGAGAATTTAGA
AACTCCTCTTCACCAAGAAGAATATTTGCGTTCAATGCAATGTCAGATCC
TTATCGAAAACGCTGGTAAATGTACACAGTGTCATAAAATGGAAATCAAA
CTTCGTAGTCAACTTAACACcaagaaaaattctttaaaatcaCCGTTGCA
TCCAAATGCACCTTTGTCATTTGTTTCTCCAGACAAACTCGTTGAAACTG
TCAAACTTCAAAGAGTTGAAAACAAAGCTTTaatgaaagaaacaaaaata
ctcagaGAACGATTAGAAGCAGCAATTGAAAAAAACTCTATGGATGTCAC
TGATGATTTGAACAATGACTTGATAGATATTTTTAAAGGCATCCCCGAAG
ATAAAGTGCCACCATTTATGCGTCTTTTCTGGGAGGAGCAGCAAAAGTAC
ATTCGAGCAAAAACTAAATCACAGATTCGTTACCACCCTGCCATCATTAA
GTTTTGTCTCTCAATCGCATCTAAATCACCAGCTGCCTATGAGCAACTCC
GCTTAAATGACAAGGATGGGACAGGTGTCATGGTGCTTCCAAGTCAAAGA
ACTTTGAGGGATTACAGAAATTATAGCCGAAGCAAGGATTCAATCCTGAA
GTTATTCAAGACTTGATAGATAGGACCAAAGAATTCAGTGATCGAGAGAG
ATATGTTAATATTCTGATAGATGAGATGAAAATACAAGAGGATTTGGTCT
GGAACAAACATACTGGAGAGTTGATTGGCTTTATTGATCTTGGTGATGAT
GAGCTCAATGAGGGTCTGCTTGAAGACAAAACTAAACTAGCAACACACAT
CATGGTATTCATGGCCAAGAGCCTTATGAACCCCCTTTCGTTTGCCTTTG
CTAACTTTGCTACTGATGGAGCATCCAGTGAACAAATTTTCTCTTTATTT
TGGAAGGCAGTGAGTATCTTGGAGATCACATGTAACCTAAAAGTTGTTTC
CACTGTTGCTGATGGGGCTTCAATTAACAGAAAATTCATGCAGATGAATA
GGGATTCAGACGGTAAAAATGGTTCAGAGTTGATTTACAAGGTCAAGAAC
ATGTATTCAGAAGAAGAACGTTACATATTCTTTTTTGCCGATGTACCTCA
TCTCATCAAGACAGCACGAAACTGCCTTTGGTCATCAGGCTCTGATTTTT
CTCCAAGATTCATGTGGAACAATGGTTCTTACTTGCTTTGGCAGCACATT
AAAACTATGTTTTATGAAGACATGGACAATGGATTGAAGTTAATGCCAAA
ACTTACCACAGACCACATTCTTCTCAACTCCTACTCTAAAATGAGAGTTT
ACTTAGCTGCTGAAATTCTCAGTAATACAGTTGGAAACATGTTGTTGAAA
TTCGGTCCAGAAGAGGCTAAAGGAACTGCTGGATTCTGCTTACAAATGGA
TCAGTTTTTTGATTGTTTTAACGTGCGAAATACCAAAGAACACAAAAAGA
CTGGAAAACCTTTTTTAGCTCCATATACCACAGTTGATCCTAAAAAGGAT
GAACGGTTTAGCTTTCTTGACAAATTTTTGAAATATCTAGATGATTGGAA
AAAGAGTACAATGGAACGCCCTGGGGAATTTTCCCAAACCAACCGAAACA
ATATGTTTTTATCTTTACCAACATATAATGGTATCAAAATTAGCATCAGT
TCCCTCAAAGAAATCATACCATTTTTACTTGACCAATGTGGATTTGACTA
TGTTCTAACAGAAAAGTTTTGCCAGGATGACATTGAAAATTACTTTGGGA
AACAGAGGGCAATTGGTCGTTTTAAGGACAATCCAACTGCAAAAGATTCT
ATCTACAATGACAATATAATAAAATCACAGTTTGACACACGACCGATTGC
TGGTAATGTTAGAAAGGCTGAGTTTGATCCCAAAGATATACCAGACACTc
caatcaaaaaacgtaaatgTTAAAAATGCTGTATGTAGTACAGTATCGAA
GATAAGAGATATTTAATTAAGACTTTGGTTATAGAGGATCTTAATAGATA
AAATCTactactcttttgtgcttaattgtaggggtaGGTGGGACAAGTGG
GGAGGGGGTTAGTGGGTACTCCAggtgaaaatcaacaaaatggggGGATA
ATAAATCATataaattttttccatattttcatCCCCAAAATCACTTTATA
TTGCAATGA
Run BLAST on NCBI

protein sequence of TCONS_00054905-protein

>TCONS_00054905-protein ID=TCONS_00054905-protein|Name=TCONS_00054905-protein|organism=Clytia hemisphaerica|type=polypeptide|length=415bp
MKIQEDLVWNKHTGELIGFIDLGDDELNEGLLEDKTKLATHIMVFMAKSL
MNPLSFAFANFATDGASSEQIFSLFWKAVSILEITCNLKVVSTVADGASI
NRKFMQMNRDSDGKNGSELIYKVKNMYSEEERYIFFFADVPHLIKTARNC
LWSSGSDFSPRFMWNNGSYLLWQHIKTMFYEDMDNGLKLMPKLTTDHILL
NSYSKMRVYLAAEILSNTVGNMLLKFGPEEAKGTAGFCLQMDQFFDCFNV
RNTKEHKKTGKPFLAPYTTVDPKKDERFSFLDKFLKYLDDWKKSTMERPG
EFSQTNRNNMFLSLPTYNGIKISISSLKEIIPFLLDQCGFDYVLTEKFCQ
DDIENYFGKQRAIGRFKDNPTAKDSIYNDNIIKSQFDTRPIAGNVRKAEF
DPKDIPDTPIKKRKC
Run BLAST on NCBI

transcript from alignment at scaffold_246:54837..60517-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054905 ID=TCONS_00054905|Name=TCONS_00054905|organism=Clytia hemisphaerica|type=transcript|length=5681bp|location=Sequence derived from alignment at scaffold_246:54837..60517- (Clytia hemisphaerica)
AGGCTTTTGTTTTAACTTATTCAATTTGAAAACGCTCGTACCCAGACCTG
ATGGAGGGGAAGCGACTTTCAAAATGGCGGATACGTAAGCTGAAAACTTG
TTGGAAAAATGAAACTGAGCTTGAAAACATTGGGTTTCTACTTAAAATAA
TGAGGATTTTTTAATGAATCATTTAATTTAAATTATTTTACAGCTGAAAT
AAAAAAATAAATGAAATATTTACGTAATGACTGGGTCAAATTGTTCTATT
GTGGGTTGTACCACTAACAGGAACACTCACAAGGACCTCTCAATATTTCG
TTTACCAAGTTTGAAGACTGAAAATCCAAGACGATTGAGTTGGAGAAAAG
AGTGGTTACATATCATCTTAAAGGACCGTGTTTTAGATAATAAACTCCAA
AAACAGATTGATAAAAACAATGTTTATGTTTGTGAAAAGCACTTCAAAGT
GGAAGACTTGTTACAATGTAAGTAAAAAATACAATTCTATTTTCTTACTT
TACAATTATAATGACAATGCTAAGAATATAAGAATTGCTTTTGGCCAATT
ATGGAACAGTTCCACTTTCTATATTTCCTAGGGTCATGTTAAACAGGGTT
CGAATTGTTAATTAAACATTTTAAGATAAAACCAGCTATAACAGCCTATA
ATAATGAATAAAATTATATTTACTTTATCAATTACACGTACTCTTAGATA
GAGCTGATTTCACTAAACCTTTGCCCATCAAAATGAGAAAAAAGTGTCAT
TTCGGTGGTTTGATTATAAAGCTTTTAATCAATCTTTCAGATGCAGCCAA
AAAAGAAGTACGAGAATTCTGCTTGCCGACTGAAAATCTTCCGAAGAAGC
ACCTTGATCTACATGAAGTATCAAGACCAACATCAAGCATCGAAAAAAGA
GAAATTTTTCAACAAAAGAAAGCAAAACACGATATTCCAAAACCAAATTG
CTACAAAAGCTTCAAAGACTTTTTAGATAGAATTCAGAGGCTAAGTCTCA
AAGGATGGACTATTGTTAACAATCATCTTGGATTTGTGGAAATCAGAAAG
AATTTACCTGAATACCTTGGTCCAAAATTTCAAATTTTTGTGAAAGAAGA
TCTGACTTTCAGACTTCGAATCCATGGCTGGATGTTGTCTTTGGAATCTG
AGTTTATGAAAACCTACAATTCAATGCAGAGCGTAACTTTGAGTTATTTG
ATCACTATTTTGGAAAAATACCAACTTTGTCAAGGTAAATAAATCAGCAT
TTTTTGTTTTGCATAAATTTGCTCTCATCAGCCAACAGTGNCCTACAATT
CAATGCAGAGCGTAACTTTGAGTTATTTGATCACTATTTTGGAAAAATAC
CAACTTTGTCAAGGTAAATAAATCAGCATTTTTTGTTTTGTATAAATTTG
CTCTCATCAGCCAACAGTGTTTACATTTTTTTTGTAAAATCAGAAATGAA
CATTCTGATGATAGTTATTTTGAATCATCTTTTTAATTTGAGGTACAGTT
TTATTTTACCCTCCAATGGCTTACATTTGCTGTCAATTTGAACAGTAATA
TTTTATTTTGTATTGCATATGTCGGATTTAGAACCTGGGGGTCGATATTA
GAGCATCTTACGGTATAGACAATTCTATGATGTTGAGGTGATGTAAGTTT
TCCTCAGTCATTTTTTACTCATGTCACATTGACTTCATTCACTGGGACGT
ACACGTGCCAAATTGGTTAATGCAAATATTTTTTTTATTTTTTTTCAATA
GCTGTTGATCTGGTTGAATTCAAAGAGGCAGTCAACTTGCAACATCACAT
GGTACAAAAAGCATTTGATTTCAGAGATAATCCACCAGAGAATTTAGNGA
TCTGGTTGAATTCAAAGAGGCAGTCAACTTGCAACATCACATGGTACAAA
AAGCATTTGATTTCAGAGATAATCCACCAGAGAATTTAGAAACTCCTCTT
CACCAAGAAGAATATTTGCGTTCAATGCAATGTCAGATCCTTATCGAAAA
CGCTGGTAAATGTACACAGTGTCATAAAATGGAAATCAAACTTCGTAGTC
AACTTAACACCAAGAAAAATTCTTTAAAATCACCGTTGCATCCAAATGCA
CCTTTGTCATTTGTTTCTCCAGACAAACTCGTTGAAACTGTCAAACTTCA
AAGAGTTGAAAACAAAGCTTTAATGAAAGAAACAAAAATACTCAGAGAAC
GATTAGAAGCAGCAATTGAAAAAAACTCTATGGATGTCACTGATGATTTG
AACAATGACTTGATAGATATTTTTAAAGGCATCCCCGAAGATAAAGTGCC
ACCATTTATGCGTCTTTTCTGGGAGGAGCAGCAAAAGTACATTCGAGCAA
AAACTAAATCACAGATTCGTTACCACCCTGCCATCATTAAGTTTTGTCTC
TCAATCGCATCTAAATCACCAGCTGCCTATGAGCAACTCCGCTTAAATGA
CAAGGATGGGACAGGTGTCATGGTGCTTCCAAGTCAAAGAACTTTGAGGG
ATTACAGAAATTATAGCCGAAGCAAGGTATGCTCTTCTTTTCTTTCACCT
TTTTAAGAAATCCTCTTGTTTTGCAAATTTCGGTAAAAGCTGGAATAATT
TTTTAATTTTTTAATTTTCTTTTGAAGACTTTTGATATGAAAATGCAGTG
ATAAATCTGAATCCAGAATTTGTTTTTTCAAAATACGATGATGACAGACT
TGCTTTTGAATCATCCATGTCTATGCAGTGAAGGGGGAAGAGGGTCTATT
GTTTTAAATAACTTACTATTATTCTTTGTGTACAAGGGGGGGGGGTCAAT
TATTTGGAAAATTTTTGTGTTGCTATGTGGATGATCCCTTTAAGAAAAGG
CATATGAAAATATCTTTAAAATTTGGATATGACGGACAGCATAGTTTATC
AAGACATGTTTAAAAATTTTGAATTTTTCAAAATCAATTAAGATTTTTAA
CTTTTGTTTTATAGGATTCAATCCTGAAGTTATTCAAGACTTGATAGATA
GGACCAAAGAATTCAGTGATCGAGAGAGATATGTTAATATTCTGATAGAT
GAGATGAAAATACAAGAGGATTTGGTCTGGAACAAACATACTGGAGAGTT
GATTGGCTTTATTGATCTTGGTGATGATGAGCTCAATGAGGGTCTGCTTG
AAGACAAAACTAAACTAGCAACACACATCATGGTATTCATGGCCAAGAGC
CTTATGAACCCCCTTTCGTTTGCCTTTGCTAACTTTGCTACTGATGGAGC
ATCCAGTGAACAAATTTTCTCTTTATTTTGGAAGGCAGTGAGTATCTTGG
AGATCACATGTAACCTAAAAGTTGTTTCCACTGTTGCTGATGGGGCTTCA
ATTAACAGAAAATTCATGCAGATGAATAGGGTAAGATATTTAAAGTTAAA
AAGTAGCACACTTTCTACCCTGATGATGGGTGGACTTTTAGTGAGGATTT
TTAATTTTTTTTTAGAAAAATTAGATTTTGAATTTTTTTAAAGAATTCAA
GTTTTTCTTATTATAAATAAAAGAGCCTAGAAATTTATTGGAAAAAAAGA
ATATGAAAGTGGGAAATCTTTTAACATTATCTCCTACTTTTGTGTCTATT
TTTTTAAGAGAGTACTTATGAGCATAATTAGCCAGTAATTGAGGCATTTT
TGAAATAAGAATTATTTTTAGCCAGGATTTGATCGTTACTCAATTCTGAT
ATATTGATGGTGAGAGAGTCAAGTATCACCTACACACTTGTATCTTAAAA
GGTTATGAAGTGATATGCAATATTAACAAGCATTCAGTTGAAAAATGTCT
GTTTAGGTATTCAACCCTCAAAAAATATTTAGTCATTTGTGTACTAGAGG
TTAACTACCAAGTGTCGGATAATTACCCTTTCGAGATTTATCAGTCATTG
AAATTAATGCAAATTGGTTGGATTTATTGAATTGTCTTTCAATTTGCCTA
TGAACTTTTGAAAGCTTTGGAAAATTTATATTTTCCAGGTTGCAAATTCA
TAAAGTTATATTTCAAAAATCACCATGTAAAATACATGTAATTTACATGG
TGATTTTTTTAATATAACTTTTAATACCGTAGTAATATAATATAACTGAA
ACTTTTAATTCATCTATTCAGGATTCAGACGGTAAAAATGGTTCAGAGTT
GATTTACAAGGTCAAGAACATGTATTCAGAAGAAGAACGTTACATATTCT
TTTTTGCCGATGTACCTCATCTCATCAAGACAGCACGAAACTGCCTTTGG
TCATCAGGCTCTGATTTTTCTCCAAGATTCATGTGGAACAATGGTAATTT
AAGTTTTTATGTCATTAAGTTATTGGGGGATTTTTGCAACATCACATGGT
GCAAAGTTATACGGGGATTCTTTTTGGAAAAAGGAAAGGTATTCAATAAG
GGATGGGTAAATTTTAAAAGGGAGGGGGTACAGATCTCTCTGCACACTAT
GAGGCTAACCTGGGTAAACCTGGATTTTTTCTTGCCAAGTGAACTAACAA
TCTAATCTAGTTGCTTGGTCTTTGCAAACCAACTTGGACAGTAGGAATTG
TCCTTTAGAAATTGAAAAACTAAAAGTGTTAGTTATCCCTTACTCTTGAT
CTTTCCCTGATCAAATTGATGGTTCTGGAATACTGGCATAGTCAAACATT
TGCTTTGGTACGTTTATATTTTTACCTCTTTTAACTTTTCTTTCAGGTTC
TTACTTGCTTTGGCAGCACATTAAAACTATGTTTTATGAAGACATGGACA
ATGGATTGAAGTTAATGCCAAAACTTACCACAGACCACATTCTTCTCAAC
TCCTACTCTAAAATGAGAGTTTACTTAGCTGCTGAAATTCTCAGTAATAC
AGTTGGAAACATGTTGTTGAAATTCGGTCCAGAAGAGGCTAAAGGAACTG
CTGGATTCTGCTTACAAATGGATCAGTTTTTTGATTGTTTTAACGTGCGA
AATACCAAAGAACACAAAAAGACTGGAAAACCTTTTTTAGCTCCATATAC
CACAGTTGATCCTAAAAAGGATGAACGGTTTAGCTTTCTTGACAAATTTT
TGAAATATCTAGATGATTGGAAAAAGAGTACAATGGAACGCCCTGGGGAA
TTTTCCCAAACCAACCGAAACAATATGTTTTTATCTTTACCAACATATAA
TGGTATCAAAATTAGCATCAGTTCCCTCAAAGAAATCATACCATTTTTAC
TTGACCAATGTGGATTTGACTATGTTCTAACAGAAAAGTTTTGCCAGGAT
GACATTGAAAATTACTTTGGGAAACAGAGGGCAATTGGTCGTTTTAAGGA
CAATCCAACTGCAAAAGATTCTATCTACAATGACAATATAATAAAATCAC
AGTTTGACACACGACCGATTGCTGGTAATGTTAGAAAGGCTGAGTTTGAT
CCCAAAGATATACCAGACACTCCAATCAAAAAACGTAAATGTTAAAAATG
CTGTATGTAGTACAGTATCGAAGATAAGAGATATTTAATTAAGACTTTGG
TTATAGAGGATCTTAATAGATAAAATCTACTACTCTTTTGTGCTTAATTG
TAGGGGTAGGTGGGACAAGTGGGGAGGGGGTTAGTGGGTACTCCAGGTGA
AAATCAACAAAATGGGGGGATAATAAATCATATAAATTTTTTCCATATTT
TCATCCCCAAAATCACTTTATATTGCAATGA

Coding sequence (CDS) from alignment at scaffold_246:54837..60517-

>TCONS_00054905 ID=TCONS_00054905|Name=TCONS_00054905|organism=Clytia hemisphaerica|type=CDS|length=3744bp|location=Sequence derived from alignment at scaffold_246:54837..60517- (Clytia hemisphaerica)
GTTCTTACTTGCTTTGGCAGCACATTAAAACTATGTTTTATGAAGACATG
GACAATGGATTGAAGTTAATGCCAAAACTTACCACAGACCACATTCTTCT
CAACTCCTACTCTAAAATGAGAGTTTACTTAGCTGCTGAAATTCTCAGTA
ATACAGTTGGAAACATGTTGTTGAAATTCGGTCCAGAAGAGGCTAAAGGA
ACTGCTGGATTCTGCTTACAAATGGATCAGTTTTTTGATTGTTTTAACGT
GCGAAATACCAAAGAACACAAAAAGACTGGAAAACCTTTTTTAGCTCCAT
ATACCACAGTTGATCCTAAAAAGGATGAACGGTTTAGCTTTCTTGACAAA
TTTTTGAAATATCTAGATGATTGGAAAAAGAGTACAATGGAACGCCCTGG
GGAATTTTCCCAAACCAACCGAAACAATATGTTTTTATCTTTACCAACAT
ATAATGGTATCAAAATTAGCATCAGTTCCCTCAAAGAAATCATACCATTT
TTACTTGACCAATGTGGATTTGACTATGTTCTAACAGAAAAGTTTTGCCA
GGATGACATTGAAAATTACTTTGGGAAACAGAGGGCAATTGGTCGTTTTA
AGGACAATCCAACTGCAAAAGATTCTATCTACAATGACAATATAATAAAA
TCACAGTTTGACACACGACCGATTGCTGGTAATGTTAGAAAGGCTGAGTT
TGATCCCAAAGATATACCAGACACTCCAATCAAAAAACGTAAATGTTAAG
ATTCAGACGGTAAAAATGGTTCAGAGTTGATTTACAAGGTCAAGAACATG
TATTCAGAAGAAGAACGTTACATATTCTTTTTTGCCGATGTACCTCATCT
CATCAAGACAGCACGAAACTGCCTTTGGTCATCAGGCTCTGATTTTTCTC
CAAGATTCATGTGGAACAATGATGAAAATACAAGAGGATTTGGTCTGGAA
CAAACATACTGGAGAGTTGATTGGCTTTATTGATCTTGGTGATGATGAGC
TCAATGAGGGTCTGCTTGAAGACAAAACTAAACTAGCAACACACATCATG
GTATTCATGGCCAAGAGCCTTATGAACCCCCTTTCGTTTGCCTTTGCTAA
CTTTGCTACTGATGGAGCATCCAGTGAACAAATTTTCTCTTTATTTTGGA
AGGCAGTGAGTATCTTGGAGATCACATGTAACCTAAAAGTTGTTTCCACT
GTTGCTGATGGGGCTTCAATTAACAGAAAATTCATGCAGATGAATAGGGT
TCTTACTTGCTTTGGCAGCACATTAAAACTATGTTTTATGAAGACATGGA
CAATGGATTGAAGTTAATGCCAAAACTTACCACAGACCACATTCTTCTCA
ACTCCTACTCTAAAATGAGAGTTTACTTAGCTGCTGAAATTCTCAGTAAT
ACAGTTGGAAACATGTTGTTGAAATTCGGTCCAGAAGAGGCTAAAGGAAC
TGCTGGATTCTGCTTACAAATGGATCAGTTTTTTGATTGTTTTAACGTGC
GAAATACCAAAGAACACAAAAAGACTGGAAAACCTTTTTTAGCTCCATAT
ACCACAGTTGATCCTAAAAAGGATGAACGGTTTAGCTTTCTTGACAAATT
TTTGAAATATCTAGATGATTGGAAAAAGAGTACAATGGAACGCCCTGGGG
AATTTTCCCAAACCAACCGAAACAATATGTTTTTATCTTTACCAACATAT
AATGGTATCAAAATTAGCATCAGTTCCCTCAAAGAAATCATACCATTTTT
ACTTGACCAATGTGGATTTGACTATGTTCTAACAGAAAAGTTTTGCCAGG
ATGACATTGAAAATTACTTTGGGAAACAGAGGGCAATTGGTCGTTTTAAG
GACAATCCAACTGCAAAAGATTCTATCTACAATGACAATATAATAAAATC
ACAGTTTGACACACGACCGATTGCTGGTAATGTTAGAAAGGCTGAGTTTG
ATCCCAAAGATATACCAGACACTCCAATCAAAAAACGTAAATGTTAAGAT
TCAGACGGTAAAAATGGTTCAGAGTTGATTTACAAGGTCAAGAACATGTA
TTCAGAAGAAGAACGTTACATATTCTTTTTTGCCGATGTACCTCATCTCA
TCAAGACAGCACGAAACTGCCTTTGGTCATCAGGCTCTGATTTTTCTCCA
AGATTCATGTGGAACAATGATGAAAATACAAGAGGATTTGGTCTGGAACA
AACATACTGGAGAGTTGATTGGCTTTATTGATCTTGGTGATGATGAGCTC
AATGAGGGTCTGCTTGAAGACAAAACTAAACTAGCAACACACATCATGGT
ATTCATGGCCAAGAGCCTTATGAACCCCCTTTCGTTTGCCTTTGCTAACT
TTGCTACTGATGGAGCATCCAGTGAACAAATTTTCTCTTTATTTTGGAAG
GCAGTGAGTATCTTGGAGATCACATGTAACCTAAAAGTTGTTTCCACTGT
TGCTGATGGGGCTTCAATTAACAGAAAATTCATGCAGATGAATAGGGTTC
TTACTTGCTTTGGCAGCACATTAAAACTATGTTTTATGAAGACATGGACA
ATGGATTGAAGTTAATGCCAAAACTTACCACAGACCACATTCTTCTCAAC
TCCTACTCTAAAATGAGAGTTTACTTAGCTGCTGAAATTCTCAGTAATAC
AGTTGGAAACATGTTGTTGAAATTCGGTCCAGAAGAGGCTAAAGGAACTG
CTGGATTCTGCTTACAAATGGATCAGTTTTTTGATTGTTTTAACGTGCGA
AATACCAAAGAACACAAAAAGACTGGAAAACCTTTTTTAGCTCCATATAC
CACAGTTGATCCTAAAAAGGATGAACGGTTTAGCTTTCTTGACAAATTTT
TGAAATATCTAGATGATTGGAAAAAGAGTACAATGGAACGCCCTGGGGAA
TTTTCCCAAACCAACCGAAACAATATGTTTTTATCTTTACCAACATATAA
TGGTATCAAAATTAGCATCAGTTCCCTCAAAGAAATCATACCATTTTTAC
TTGACCAATGTGGATTTGACTATGTTCTAACAGAAAAGTTTTGCCAGGAT
GACATTGAAAATTACTTTGGGAAACAGAGGGCAATTGGTCGTTTTAAGGA
CAATCCAACTGCAAAAGATTCTATCTACAATGACAATATAATAAAATCAC
AGTTTGACACACGACCGATTGCTGGTAATGTTAGAAAGGCTGAGTTTGAT
CCCAAAGATATACCAGACACTCCAATCAAAAAACGTAAATGTTAAGATTC
AGACGGTAAAAATGGTTCAGAGTTGATTTACAAGGTCAAGAACATGTATT
CAGAAGAAGAACGTTACATATTCTTTTTTGCCGATGTACCTCATCTCATC
AAGACAGCACGAAACTGCCTTTGGTCATCAGGCTCTGATTTTTCTCCAAG
ATTCATGTGGAACAATGATGAAAATACAAGAGGATTTGGTCTGGAACAAA
CATACTGGAGAGTTGATTGGCTTTATTGATCTTGGTGATGATGAGCTCAA
TGAGGGTCTGCTTGAAGACAAAACTAAACTAGCAACACACATCATGGTAT
TCATGGCCAAGAGCCTTATGAACCCCCTTTCGTTTGCCTTTGCTAACTTT
GCTACTGATGGAGCATCCAGTGAACAAATTTTCTCTTTATTTTGGAAGGC
AGTGAGTATCTTGGAGATCACATGTAACCTAAAAGTTGTTTCCACTGTTG
CTGATGGGGCTTCAATTAACAGAAAATTCATGCAGATGAATAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034598XLOC_034598Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054905-proteinTCONS_00054905-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054905-exon-scaffold_246-1575043694:60051..60517TCONS_00054905-exon-scaffold_246-1575043694:60051..60517Clytia hemisphaericaexon
TCONS_00054905-exon-scaffold_246-1575043694:59284..59727TCONS_00054905-exon-scaffold_246-1575043694:59284..59727Clytia hemisphaericaexon
TCONS_00054905-exon-scaffold_246-1575043694:57992..58766TCONS_00054905-exon-scaffold_246-1575043694:57992..58766Clytia hemisphaericaexon
TCONS_00054905-exon-scaffold_246-1575043694:57138..57553TCONS_00054905-exon-scaffold_246-1575043694:57138..57553Clytia hemisphaericaexon
TCONS_00054905-exon-scaffold_246-1575043694:56225..56396TCONS_00054905-exon-scaffold_246-1575043694:56225..56396Clytia hemisphaericaexon
TCONS_00054905-exon-scaffold_246-1575043694:54837..55821TCONS_00054905-exon-scaffold_246-1575043694:54837..55821Clytia hemisphaericaexon
TCONS_00054905-exon-scaffold_246-1510915933:60051..60517TCONS_00054905-exon-scaffold_246-1510915933:60051..60517Clytia hemisphaericaexon
TCONS_00054905-exon-scaffold_246-1510915933:59284..59727TCONS_00054905-exon-scaffold_246-1510915933:59284..59727Clytia hemisphaericaexon
TCONS_00054905-exon-scaffold_246-1510915933:57992..58766TCONS_00054905-exon-scaffold_246-1510915933:57992..58766Clytia hemisphaericaexon
TCONS_00054905-exon-scaffold_246-1510915933:57138..57553TCONS_00054905-exon-scaffold_246-1510915933:57138..57553Clytia hemisphaericaexon
TCONS_00054905-exon-scaffold_246-1510915933:56225..56396TCONS_00054905-exon-scaffold_246-1510915933:56225..56396Clytia hemisphaericaexon
TCONS_00054905-exon-scaffold_246-1510915933:54837..55821TCONS_00054905-exon-scaffold_246-1510915933:54837..55821Clytia hemisphaericaexon
TCONS_00054905-exon-scaffold_246-1491911889:60051..60517TCONS_00054905-exon-scaffold_246-1491911889:60051..60517Clytia hemisphaericaexon
TCONS_00054905-exon-scaffold_246-1491911889:59284..59727TCONS_00054905-exon-scaffold_246-1491911889:59284..59727Clytia hemisphaericaexon
TCONS_00054905-exon-scaffold_246-1491911889:57992..58766TCONS_00054905-exon-scaffold_246-1491911889:57992..58766Clytia hemisphaericaexon
TCONS_00054905-exon-scaffold_246-1491911889:57138..57553TCONS_00054905-exon-scaffold_246-1491911889:57138..57553Clytia hemisphaericaexon
TCONS_00054905-exon-scaffold_246-1491911889:56225..56396TCONS_00054905-exon-scaffold_246-1491911889:56225..56396Clytia hemisphaericaexon
TCONS_00054905-exon-scaffold_246-1491911889:54837..55821TCONS_00054905-exon-scaffold_246-1491911889:54837..55821Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_246supercontigscaffold_246:54837..60517 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.747774	1.08837	0.487305	0.460185	2.85718	1.94789	1.86935	1.70006	1.08523	0.716348	1.52024	1.07903	0.939385	1.2338	0.401022	0.405042	1.37216	0.799121	0.618256	0.739383	2.20914	2.29222	0.571589	1.03931	1.16146	0.915562	0.740529	0.790312	0.361498	0.751653
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054905 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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