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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056420 ID=TCONS_00056420|Name=TCONS_00056420|organism=Clytia hemisphaerica|type=transcript|length=495bp
AATTTGTCTCTAAAGTCGAAGAAGAAATTTCAGAAGAAAGCAAGCCAACA
GAAGAAATTTCACAAACAGTCGAAGAACTTATGTCCAAAGTCGAAGAGGA
AACTTCAGAAGAAAGCAAGCCAACTGAAGAAGTTTCAGAAACAGTGGAAG
AACTTGTGTCCAAAATCGAAGAGGAAACTTCAGAAGAAATCAAACCAACA
GAAGAAGTTTCTCAAACAGTCGAAGAACTTGTCTCTAAAGTCGAAGAGGA
AACTTTTGAAGAAAGCAAACCAACAAAAGAAGTTTCCCAAACAGTCGAAG
AACTTGTCTTTAAAGTCGAAGAGGAAACTTCTGAAGAAAGTAAGCCAACG
GAAGAAGTTTCACAAACAGTCGAAGAACTTGTCTCTAAAGTCGAAGAGGA
AACTTCAGAAGAAAGCAAGCCAACAGAAGATGTTTCACAAACAGTCGAAG
AACTTGTCGCTAAAGTCGAAGAGGAAACTTCTGAAGAAAGCAAGC Run BLAST on NCBI transcript from alignment at scaffold_276:154572..155504+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056420 ID=TCONS_00056420|Name=TCONS_00056420|organism=Clytia hemisphaerica|type=transcript|length=933bp|location=Sequence derived from alignment at scaffold_276:154572..155504+ (Clytia hemisphaerica)
AATTTGTCTCTAAAGTCGAAGAAGAAATATCTGAGGAAAGCAAACCAACT
GAAGAGGTTTCAGAAGCAGTCGAAGAACTTGTGTCCAAAGTCGAAGAAGA
AACTTCTGAAGAAAGCAAACCAAATGAGGATGTTCCTCAAGCAGATGAAG
TGGTTTCACAAACAGTTGAAGAACTTCTCTTTAAAGTTGAAGAGGAAACT
TTAGAAGAAAGCAAGCCAACAGAAGAAATTTCACAAACAGTTGAAAAAGT
TTCAGAAACAGTCGAAGAACTCGTGTCCAAAGTCGACTTAGAAACTTCTG
AAGAAAGCAAACcaagagaaaaagtttttcaaacagATGAAGAAGTTTCA
CAAACAGTCGATGAACTTGTGTCTAATGTTGAAGAGGAAACTTCAGAAGA
AAGCAAGTCAACGGAAGAAGTTTCACAAACAGTCGAAGAACTTGTCTCTA
ATGTTGAACAGGAAACTTCAGAAGAAAGCAAGCCAACAGAAGAAATTTCA
CAAACAGTCGAAGAACTTATGTCCAAAGTCGAAGAGGAAACTTCAGAAGA
AAGCAAGCCAACTGAAGAAGTTTCAGAAACAGTGGAAGAACTTGTGTCCA
AAATCGAAGAGGAAACTTCAGAAGAAATCAAACCAACAGAAGAAGTTTCT
CAAACAGTCGAAGAACTTGTCTCTAAAGTCGAAGAGGAAACTTTTGAAGA
AAGCAAACCAACAAAAGAAGTTTCCCAAACAGTCGAAGAACTTGTCTTTA
AAGTCGAAGAGGAAACTTCTGAAGAAAGTAAGCCAACGGAAGAAGTTTCA
CAAACAGTCGAAGAACTTGTCTCTAAAGTCGAAGAGGAAACTTCAGAAGA
AAGCAAGCCAACAGAAGATGTTTCACAAACAGTCGAAGAACTTGTCGCTA
AAGTCGAAGAGGAAACTTCTGAAGAAAGCAAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056420-exon-scaffold_276-1491911889:154572..154599 | TCONS_00056420-exon-scaffold_276-1491911889:154572..154599 | Clytia hemisphaerica | exon |
| TCONS_00056420-exon-scaffold_276-1510915933:154572..154599 | TCONS_00056420-exon-scaffold_276-1510915933:154572..154599 | Clytia hemisphaerica | exon |
| TCONS_00056420-exon-scaffold_276-1575043694:154572..154599 | TCONS_00056420-exon-scaffold_276-1575043694:154572..154599 | Clytia hemisphaerica | exon |
| TCONS_00056420-exon-scaffold_276-1491911889:155038..155504 | TCONS_00056420-exon-scaffold_276-1491911889:155038..155504 | Clytia hemisphaerica | exon |
| TCONS_00056420-exon-scaffold_276-1510915933:155038..155504 | TCONS_00056420-exon-scaffold_276-1510915933:155038..155504 | Clytia hemisphaerica | exon |
| TCONS_00056420-exon-scaffold_276-1575043694:155038..155504 | TCONS_00056420-exon-scaffold_276-1575043694:155038..155504 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_276 | supercontig | scaffold_276:154572..155504 + |
Blast
The following BLAST results are available for this feature:
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