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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059945 ID=TCONS_00059945|Name=TCONS_00059945|organism=Clytia hemisphaerica|type=transcript|length=962bp
GAATTCCTCAAACGCGATCATGATGAATGGAAAAGCAAAACGAACTACAA
CACAAAACGGTCCCGAGGGACTTACTAactaaaagcattttttgattGCG
ATCCCTTGAAACTTTAGCAATGAATTCAACACATTTTAAAGCTTCTCTCA
AAAGACACAACCTCATCGTGTGTGAATAAAGATTTTTTACTCCCTCGaga
tatctgaaaatgaataagcTCTCGAGAGAGTATTCAAAGCAATTCCATAG
CTTAATAACTTTAATATAAATATCAGTAGAAATCCTTCATCAAAATACAC
ACCATTCCACATCAGTCAACATGAGGGAAAAGTGGAAGAAGAAGCGTATG
AGACGTCTGAAGAGAAAACGCCGAAAGATGCGAGCCAGATCTAAGTAAAT
TCTTATAATCAATCTATATATTCTTTACAAACTATGGGAGAAGCTATTTC
AAACGCAATTAACGGATTATCACACAATTAGCATGGCATCGATATATGAG
TAGAATTATTTTATCGAATCCACAAACCTATCAACACACACTCGAACCGC
TGCAAGCaaaattcaaacattcaacTCAAACATTCATCATCAAAAATTAT
ACGAACTTTTCATCGAGGTATTATAAGAATAATTCGTCATCTAATCTTTC
GTTGTGATGTATCTTAATCATTTCAACCGAGACGAGAATTTTCAATACAA
ACGATTTACCTAATTTAATTTGGACTGGACATTCTACCAATATCCATATA
TAAACTACACCACGAAGAGTATAACGCATTGATCAAGAGATGTTTTATAA
GGATGACAAAACTGCATTATCAGTCTATATAAGATTCACCATTTTTAATC
TACACTGCAAACTGACATCAAACAGACACAAACGGCCCAGCATTATCTAT
CGATGACTAATGATACATGACTTTTTTGATTAGTACTTTAGAATATTAAT
CACTGCAGTATT Run BLAST on NCBI transcript from alignment at scaffold_331:383620..384581 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059945 ID=TCONS_00059945|Name=TCONS_00059945|organism=Clytia hemisphaerica|type=transcript|length=962bp|location=Sequence derived from alignment at scaffold_331:383620..384581 (Clytia hemisphaerica)
AATACTGCAGTGATTAATATTCTAAAGTACTAATCAAAAAAGTCATGTAT
CATTAGTCATCGATAGATAATGCTGGGCCGTTTGTGTCTGTTTGATGTCA
GTTTGCAGTGTAGATTAAAAATGGTGAATCTTATATAGACTGATAATGCA
GTTTTGTCATCCTTATAAAACATCTCTTGATCAATGCGTTATACTCTTCG
TGGTGTAGTTTATATATGGATATTGGTAGAATGTCCAGTCCAAATTAAAT
TAGGTAAATCGTTTGTATTGAAAATTCTCGTCTCGGTTGAAATGATTAAG
ATACATCACAACGAAAGATTAGATGACGAATTATTCTTATAATACCTCGA
TGAAAAGTTCGTATAATTTTTGATGATGAATGTTTGAgttgaatgtttga
attttGCTTGCAGCGGTTCGAGTGTGTGTTGATAGGTTTGTGGATTCGAT
AAAATAATTCTACTCATATATCGATGCCATGCTAATTGTGTGATAATCCG
TTAATTGCGTTTGAAATAGCTTCTCCCATAGTTTGTAAAGAATATATAGA
TTGATTATAAGAATTTACTTAGATCTGGCTCGCATCTTTCGGCGTTTTCT
CTTCAGACGTCTCATACGCTTCTTCTTCCACTTTTCCCTCATGTTGACTG
ATGTGGAATGGTGTGTATTTTGATGAAGGATTTCTACTGATATTTATATT
AAAGTTATTAAGCTATGGAATTGCTTTGAATACTCTCTCGAGAgcttatt
cattttcagatatctCGAGGGAGTAAAAAATCTTTATTCACACACGATGA
GGTTGTGTCTTTTGAGAGAAGCTTTAAAATGTGTTGAATTCATTGCTAAA
GTTTCAAGGGATCGCaatcaaaaaatgcttttagtTAGTAAGTCCCTCGG
GACCGTTTTGTGTTGTAGTTCGTTTTGCTTTTCCATTCATCATGATCGCG
TTTGAGGAATTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059945-exon-scaffold_331-1491911889:383620..384581 | TCONS_00059945-exon-scaffold_331-1491911889:383620..384581 | Clytia hemisphaerica | exon |
| TCONS_00059945-exon-scaffold_331-1510915933:383620..384581 | TCONS_00059945-exon-scaffold_331-1510915933:383620..384581 | Clytia hemisphaerica | exon |
| TCONS_00059945-exon-scaffold_331-1575043694:383620..384581 | TCONS_00059945-exon-scaffold_331-1575043694:383620..384581 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_331 | supercontig | scaffold_331:383620..384581 . |
Blast
The following BLAST results are available for this feature:
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