TCONS_00060426 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060426
Unique NameTCONS_00060426
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1224

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060426 ID=TCONS_00060426|Name=TCONS_00060426|organism=Clytia hemisphaerica|type=transcript|length=1224bp
gttttagaaatttgaaatttgaaaaatatatggtaaaatcttgaaaagta
aagaaaatacaAGATGGGAGTACCAAAGTTTTACAGATGGTTGTCAGAGA
GATATCCATGTCTCAGCCAAGTCATCAAGGAACATCAGATTCCAGAATTT
GACAATCTATACCTGGACATGAATGGAATCATTCATCCTTGCTCACATCC
AAACGATGACGACCCACATTTTCGGATTACAGAGGAACAGATCtttcgaa
atattttcaattatatTGAGGTTTTGTTCAGAATCATCAAACCAAAGAAG
AACTTCTTCATGGCTGTTGATGGGTGTGCACCAAGAGCTAAAATGAATCA
ACAGAGAAGTAGAAGATTCAGGACTGCAAAAGAAGCAGAAAATAATATTC
GAAAAGCTCAAATGAAAGGACAAACTCTACCAAAGGAGGAACGATTTGAT
TCAAACTGTATCACACCAGGTACTGAATTCATGGCAAGGTTGAACAATCA
ATTGAAATACTTTGTCAACATGAAGATCTCAACAGATCCAATGTGGCAAG
AATGTACCATTTACTTGTCTGGGCATGATgTACCAGGAGAGGGAGAACAC
AAAGTAATGGATTTCATTCGGTATTGCAAAGCACAACCTGGTTATGATCC
TAACACAAGACATTGCTTGTATGGTCTTGATGCTGATTTGATTATGCTGG
GCTTGACCTCCCACGAGCCTCACTTTGCTTTACTTCGAGAAGAAGTTCGA
TTTGGTAAACAAGCTAAAAGGATAACGAAACCTGAACAACAGACCTTTCA
CTTGCTCCATTTATCACTTCTACGagaatatctcgagtttgaattTGGTG
CTTTAAAGAGCAAGCTCCATTTTCAGTATGACATTGAGAATATCATTGAT
GATTGGATTCTCCTTGGCTTTCTTGTCGGAAACGATTTCGTACCTCATTT
ACCCAACTTTCATATTAACCATGATGCATTGCCATATCTGTACggtgttt
acaaagattttctCCTCACCACGGATGGCTATTTGCATAACGGTGGATAT
ATCAATTTGCATCGAATGAAAAAGTTCTTCGAGTTTCTAAGCAAGTTCGA
TTTGAAcaattttgaggaaaagtatGAGGACTTTAAATGGTTACAAAGCA
AGAAAACGGGGGACATGCTGGAAGATTCGCACCAAAACAATCCCAGAGGG
ACACCAAATAAGAGAAGGGTGAGC
Run BLAST on NCBI

transcript from alignment at scaffold_341:393258..401409-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060426 ID=TCONS_00060426|Name=TCONS_00060426|organism=Clytia hemisphaerica|type=transcript|length=8152bp|location=Sequence derived from alignment at scaffold_341:393258..401409- (Clytia hemisphaerica)
GTTTTAGAAATTTGAAATTTGAAAAATATATGGTAAAATCTTGAAAAGTA
AAGAAAATACAAGATGGGAGTACCAAAGTTTTACAGATGGTTGTCAGAGA
GATATCCATGTCTCAGCCAAGTCATCAAGGAACATCAGGTTTTAAATCTT
TCCATAATTCATTTTTTTCACATCACTTATATCACTATTTTTAAATTAAA
TCTTTTAGAACAATTAATACCCTAAGTTTGTCAATTTTTAACTACCCTGA
CCCCCCTAATGAGTTTCTTGCCCTCCTTTGAAGAAAGGAAAGATACAAAG
ATATCATATGGGGCTGAAGTGAAAAAATTTCTTGTTTATCGTCACCTAAT
CCTAGGTTTTGGAGGTGGGATTTGGGTTGGAAAATTTTTTATCTGATTAG
TTCAATTTACATTTGGGTAATTTTGAAATGAAAAGCGAAGAGCTTGAAGG
GAATTTACGATAAGTAGGTAGGTAGTCTTTCTTACAGAAATCTAATTGTA
AATATTTTGAATTACCATTTTGATGACTTATTTAAAACTATCACACAATA
TCTTACTTCCAGAAAGCCATACGAGCATGAATCTGGTAATATCACCCAAA
TAGGTGAAAATTTTTGGAAAAAATAAAGTTTTGAATTTCACTTTTATTCC
TGGATAATCTTTTTATTAATGACTTCAATTTTCAGAAAACATANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATTTAATCATTGAAATTT
GTTGTCTTGAAAGGTCTTTGTAACTATGATTTCCTGAAAATTGAAGATTT
ATCTGTAAAAGAGAATCCAATCATATATATCATTTTTTGTCATAATCTAA
TTTTAAAAGTGAAATTTTGAGCTTGACATTAACTGTTGTACATCTTCATA
ATCAGTAAATATGATATTTCCTTGAAAAGCCACTCATCCTTTTCAATAGA
AAGGGTTAAATGGGTAATAATGCTATGTTGCGGACATAACTTTTTTACTT
CCAGGGTAGAACCATAGAACATTTTACATCATTTTATTTAAAATTTTGGA
GTGTCTTTTTCTGTTACCAAAATTTAAGGAATATTTGAGACTAAATCAAT
ATAAAACCAAAAGATTTGGTTTGGNTCAGGTTCAGAACCATCATTTTCAA
AGAAACAAAAAGTTTATTTTTCTGTTAAAATTTTCATTTTGGACCTTAAC
TTGGCATCAGAGTATTTGTTTTCTATTTCTAATAGCCTAAGCATTACTTC
CATATAATAAAACATCATGCCAGCTTGCAAATACACTTGATCAGCAACAT
TTTAGACAAAATAGTTATGTCCGCAACATGAAATACATATGAAAGAGGTA
AATAAACTGGAAATCTTGCCAATAGAAAATTATGAAACTTTTTTCTAGTT
GTAACCAACTTAAAATGACCTTAGATGCAATAATTTGTCAAAGAAACCTA
AAATTGGTGTTTGGAGNTAACGACCCTAGAGGACACAAAAAATTGAAAAG
CAAGGAAATGCACGGTACTCACAAATGTAACTCTTTAGTATTGTCAAAGT
GTTAGCATAACTGCTTAAGAGGGTTAAAAATCTGATAAATACTTTAATAG
TTATGTCCGCAANATTGAGAAAACTTCATGCTTTGTTGCGGACATAACTT
TTTGTTGCGGACATAACTGATTTTTGGAGAAACTGTTTTGTTTCACTGTC
TCCCAATAAATAGCCTTTTAGACTTCAAATTTGTATAAAATGACCCCAAA
TGTAACCCTTGACATAGAAAAATGATTCAGCTGAGTAAGGATAACTCCTT
GAAAAATTTAAAGGATTAAATAGTGTGCGGACATAACTCAAAAATGTGAA
CGGAAACAAGACACTGTTCACTTCAAAATAATTTTAAGCGTTGACCAAGA
TAACTGCCGTTTTTTTGCAACTTGCTCTAGTTTCCCATTATCTGGGAAGA
ATTTAAAATGTAAAAACCAGTGAGCTAAAGCTTTTCAATTTTTTTCTGTG
TCAAATCTGTGCGGACATAACTTTGTGAACGGAAAAAGTTATGTCCGCAA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTTTAAGCTTGCCCATATCAA
GATTGACCAGAAACAATAAGATTTGATATGACTATATACCTATAGAGATT
TCACCAAAGCCTCAAAGTAGGAAAACTAATAAATCGAAAAGTGGGCCACA
TTACCAGATTCATGCTCATACTTACAATAGTTTTCAATCTTTATGTTAAT
TTTTACAATTCACAACTCTTGCATTGCTTGGGTATCTCTTTATGAATTGA
TGGGAAACACATTTTATTGTATTTACTTTTCTATTGTTGTAGATTCCAGA
ATTTGACAATCTATACCTGGACATGAATGGAATCATTCATCCTTGCTCAC
ATCCAAACGATGACGACCCACATTTTCGGATTACAGAGGAACAGATCTTT
CGAAATATTTTCAATTATATTGAGGTGAGCTAAACTGTTGCAAATTCGAC
TCGTTATCAAATAAACTGCTTGATACTTGATAGAGCGAGCAGTTTATATA
AAAAATGAATAGACAATTTTTTTTAATCCTTCTGAGCTTTTTGCAGTTTC
AGACAGTTTCTAGTCAGATTTCTTTGAGGTATCTTGAATAAGTATCCATT
TTTCATATTTGGACCTTAGCCTCACAATATGATATGGGTTCTCTGGACCC
ATATGGACTTTAAAAAATGTCTTTTATGCGTTGATGAGTTGAGAATGTTT
CCTTGTTTGGTTCACTGTAGGTTTTGTTCAGAATCATCAAACCAAAGAAG
AACTTCTTCATGGCTGTTGATGGGTGTGCACCAAGAGCTAAAATGAATCA
ACAGAGAAGTAGAAGATTCAGGTAGGCTTCACTTACTTACTTATGAAGGG
CCTAGTTTTGTTTATACAAACCTTTGAAGACCGTTTGAAGTTTTTGTCTC
CAAACATGTCAGATCTGAATTCATAGGGAGTTTTTGGTTTATCTCACTAA
GAATAATGGTGAATAAAAAACCTTTTGGTCAGTTTAAGTGCTCAAATGCA
TCACATAAGAAATCGTAAAGGGATGATGTAAAACTTTAAAATTCAAGATC
TAAACCTTTCTGTATAAAAAGAATGAATTGACTCTTTCAGGACTGCAAAA
GAAGCAGAAAATAATATTCGAAAAGCTCAAATGAAAGGACAAACTCTACC
AAAGGAGGAACGATTTGATTCAAACTGTATCACACCAGGTATTATTTCAA
ACTACATCCAAATGAGCTAAGTCCATGGACTGGAATTTTTCCCTTTCCAC
CAGTAGAAAAACCTTTTTTTAAGGTTCTGATCTGATAAATCAAAACACCC
AAACTCAGTCCGCTCAAAATAAGGTACAATTGGACGATAACAATTCTGAT
TAAAAGCAATTCTTTTTACATTGTTAAGAGCAGACGGCATAATACAACCT
TCTAAAAATTGTAAATGTTCATTAGTCAATAGTTCAACATCATAATGCTT
ACTATTTCTGATGCACTTCTCCTTCAGGAGTTCCAAGATTTGGCGTCGGA
CGGTTTTTTTTCGATTGTACGGCTCCCTCTGATCCCTCTGATATTGTCTC
CTTTGAAATCCATTCGTCATAACCTCGTTTACGTTTCGTCTCAATGGGCT
TGAAGAAATCAAGCTTAACTCGGTCAGGGAAGCCCACTCTCTCACGGATG
ACATTCTGGCGGTTGACGGACATGACGGCGAGACGCTCGAATTGCTCCTT
ACCATGTACTCTTCTTCAGAGGACGTAATTGAAACAATTCGTAATCGCGG
ACGTGCCAGTCTTGAGGAAGAGGGATAGGTTGAAAGGGGGTGGACAGCAG
GGACGTTTTCTTGTAACTCTCCGGAGACGTCAGGTTTTCCGTTGCAGCAG
AATCCCTTAGCCTGTTGCTGTGTGGAATAGGTGACACATCCTCTATCAAC
AGCTTTGGAGAACATGTCCTGGAGGTGCTGCCAGACGTATTGACGAATTG
TTCTCCTATCCGTCTTCTCACGCCAAGTCCCCTTGTGACGGGTTGCGCTG
ATAAGAAGGACGTCGTGTGTATGCAACTGGTTTTTAAGGGCATTTTCGCA
GGCGTATGCCGAGGTGTCGGATTCGGTTGACCAATGTTCGGCAACGAGTA
ACCTTTCTGCGTTGATAGCGTCGAGTTTCTTCTTCGAAAGATGGAGTCCG
GGGTAAATTGCGTGAATGATAACTGTAGGTGGTGTTGATACTTCGGGGTT
GTAGACATCGTCTAAATAAACAAGTCCCTTTTCTTGTATTGCAGTGAAAT
GTAAAGCTAGCATCTTGGGGTTTGTGTGACCGGCTTTTAAGGCATCGTAT
AGATCGCTTTTCGACATGGCCTTTACCTCGTTAAAGACTCGCTTGACCTG
TTGAAAAATAATCACATCGTCAAGTTCCATACAGGGTACAATTTCAAATT
CGTATTGATAGCGTCTATTATCAGTATTATAGACTCCTTTCATATTAAAT
AGTTCTTTCGGGTTACTCATTTTAAAATTCCAAAAAAATGAATACATAAT
GTTCAAATAAGCGAAGTAGAAGGCTGCATCAAAAGTAACATTTCGGCCTT
CGTCTAAGATATTTTTACATTCTTCTGACCCATCGTCTACTGTATCAATT
AAATAGTCAATGTTTCGCATAGATACGTTACTTTCTAATAAGACATCATC
AATTGCAGGAATATAACTAACCTCTTCGTCTGCAACAAGTTTGTCCATTT
CAGCGTCCATGTTAGGAAAATCATCGTCCATAAGGTTTTCAGGGTCTTGG
TAGCATTCATCATCAACGATGTCTTGTGTCTGCTTTAATTCTGCCATGTC
TGCTTCGTTATGAGGTTGAGCGTTTGGATAAGCGTCTTCCCAAATTGTTG
GTATCCAGTAGTCGTCGAGTGATATCTTTACGGTTTCCCACTGATAATTC
ATTTGATTGAAAATTAAAAAGTCTAATAATAATTCTATGAGATCTCATAG
TATAATTATGTAATACCGTATGGGTTCCGGTAACGATTCGGGTACGGGCC
GGGGTCGGTAATAATGTCTTATTTTAGGTACTTGCGTCACCTATTGTTCC
CTCGAGATTAATACCCCCGGATATGTCTAGAATCATCACCCCCGATTTTG
TCTGTTATTTATGATTGATTCAAACTGTATCACACCAGGTATTTTTTCAA
ACTACATCCAAATGAGCTAAGTCCATGGACTGGACTCTCCACCAGTAGAA
AAACCTTTTTTTAAGGTTCTGATCTGATAAATCGGTCTCAGTATGCTTTA
TAACGATCTCCATCTCTTCATATTTTTCTCTCTACTTTTTTGAAAGGTAC
TGAATTCATGGCAAGGTTGAACAATCAATTGAAATACTTTGTCAACATGA
AGATCTCAACAGATCCAATGTGGCAAGAATGTACCATTTACTTGTCTGGG
CATGATGTAAGTTGTTCCAGAAAAAATTAGCATATCCCGTTGTCAAAAAC
ATTGTTATATTGGAAGGTTAATCCAATAGATTTTTGACCTGTTTCTGGAA
ACTCCCCAGAAGATCACTTTAAGTACACAGATAGGCTAGATGTGACAGTT
TTAGCAAATTGTGCCTCAGAGAGTATGATGGAGTGCACAGTAAGAAGAGA
GAGATTACCAATTGAAAAGATACCCCATCAAGATGAGAATGTTTGAAAAT
GTTTTTCAGGTACCAGGAGAGGGAGAACACAAAGTAATGGATTTCATTCG
GTATTGCAAAGCACAACCTGGTTATGATCCTAACACAAGACATTGCTTGT
ATGGTCTTGATGCTGATTTGGTAAGCCCATCAGACCAGATGTCCGTTTTT
ACCCTAATTTTGAAAAAAGATGGAAAAATCGTCTGAAGCCTTTTGCTTTC
TTCCTTGTTCTCATAATAACTATCAAATATCGACTTTAACACTTTAACTT
ACTCTTTAATTTATTCTCAAGCAATAGGAGTAGAATGCTTTATTTTGATA
CATGTTCTTTACTTATCCAAACTCTAAATTATTACCAAGTATCATGAAAT
TCCATTTCCTCTTCAGATTATGCTGGGCTTGACCTCCCACGAGCCTCACT
TTGCTTTACTTCGAGAAGAAGTTCGATTTGGTAAACAAGCTAAAAGGATA
ACGAAACCTGAACAACAGACCTTTCACTTGCTCCATTTATCACTTCTACG
AGAATATCTCGAGTTTGAATTTGGTGCTTTAAAGGTAAGGCTTGTTTTCG
ATGACTCACACAATTTTAGCTAGTAAGTAAGTCTGCGACCGCAGTCGGAG
GCGACCCGAAGGCTCCTCTTTCGATAGCTATCTACCCGAAGGTAGGGGAG
GGCGCCACTCTTTCTCCCTGGATTTNTCACTAATGACAACGTGTTTACTT
CATTCCTGAAAGTTCACAGAAGGAGAGTTAAAAACTTTTTCTTTTCTTCT
TAGAGCAAGCTCCATTTTCAGTATGACATTGAGAATATCATTGATGATTG
GATTCTCCTTGGCTTTCTTGTCGGAAACGATTTCGTACCTCATTTACCCA
ACTTTCATATTAACCATGATGCATTGCCATATCTGTACGGTGTTTACAAA
GATTTTCTCCTCACCACGGATGGTAAGTAGTTTTTCAGGTTTACTAATCC
TGATCGGTTTGAACATTTTGGGGTAAAAAATATTAATTTTTTTGAAGCCG
TATTTTCAAATTGCATTCAATTTATTTCAAATCATGAGAAATCTGACATT
TGATTTTCTTCTTTTAAACCAGGCTATTTGCATAACGGTGGATATATCAA
TTTGCATCGAATGAAAAAGTTCTTCGAGTTTCTAAGCAAGGTAACATGGT
CCATCTTTATAATGTTTCGAAATGCGAGATCGAATTTGATATAAGATTTT
GATAACGAAAATCATAACGTAAAAAGGAAAAATTAGAACTGTTCGAAAAG
AAAAAAATTATATTCTAGTACCCTAGTAGTCAGAAATGGTTCAGGTTGAA
CTGGAATATTCAATCCATGGTTAACGATGAAAATAACAAAAAAACTGAAT
TTGATAAAAACAAGTAAAGTTTTCAAGTTTGCATATAGTCACTTTACCCT
CTTTTTGTTTGTGTAATTTTCAGTTCGATTTGAACAATTTTGAGGAAAAG
TATGAGGACTTTAAATGGTTACAAAGCAAGAAAACGGGGGACATGCTGGA
AGATTCGCACCAAAACAATCCCAGAGGGACACCAAATAAGAGAAGGGTGA
GC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038001XLOC_038001Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060426-exon-scaffold_341-1575043694:401272..401409TCONS_00060426-exon-scaffold_341-1575043694:401272..401409Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1575043694:398036..398167TCONS_00060426-exon-scaffold_341-1575043694:398036..398167Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1575043694:397639..397739TCONS_00060426-exon-scaffold_341-1575043694:397639..397739Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1575043694:397272..397369TCONS_00060426-exon-scaffold_341-1575043694:397272..397369Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1575043694:395054..395163TCONS_00060426-exon-scaffold_341-1575043694:395054..395163Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1575043694:394690..394800TCONS_00060426-exon-scaffold_341-1575043694:394690..394800Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1575043694:394276..394443TCONS_00060426-exon-scaffold_341-1575043694:394276..394443Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1575043694:393888..394056TCONS_00060426-exon-scaffold_341-1575043694:393888..394056Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1575043694:393670..393737TCONS_00060426-exon-scaffold_341-1575043694:393670..393737Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1575043694:393258..393386TCONS_00060426-exon-scaffold_341-1575043694:393258..393386Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1510915933:401272..401409TCONS_00060426-exon-scaffold_341-1510915933:401272..401409Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1510915933:398036..398167TCONS_00060426-exon-scaffold_341-1510915933:398036..398167Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1510915933:397639..397739TCONS_00060426-exon-scaffold_341-1510915933:397639..397739Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1510915933:397272..397369TCONS_00060426-exon-scaffold_341-1510915933:397272..397369Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1510915933:395054..395163TCONS_00060426-exon-scaffold_341-1510915933:395054..395163Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1510915933:394690..394800TCONS_00060426-exon-scaffold_341-1510915933:394690..394800Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1510915933:394276..394443TCONS_00060426-exon-scaffold_341-1510915933:394276..394443Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1510915933:393888..394056TCONS_00060426-exon-scaffold_341-1510915933:393888..394056Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1510915933:393670..393737TCONS_00060426-exon-scaffold_341-1510915933:393670..393737Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1510915933:393258..393386TCONS_00060426-exon-scaffold_341-1510915933:393258..393386Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1491911889:401272..401409TCONS_00060426-exon-scaffold_341-1491911889:401272..401409Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1491911889:398036..398167TCONS_00060426-exon-scaffold_341-1491911889:398036..398167Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1491911889:397639..397739TCONS_00060426-exon-scaffold_341-1491911889:397639..397739Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1491911889:397272..397369TCONS_00060426-exon-scaffold_341-1491911889:397272..397369Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1491911889:395054..395163TCONS_00060426-exon-scaffold_341-1491911889:395054..395163Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1491911889:394690..394800TCONS_00060426-exon-scaffold_341-1491911889:394690..394800Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1491911889:394276..394443TCONS_00060426-exon-scaffold_341-1491911889:394276..394443Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1491911889:393888..394056TCONS_00060426-exon-scaffold_341-1491911889:393888..394056Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1491911889:393670..393737TCONS_00060426-exon-scaffold_341-1491911889:393670..393737Clytia hemisphaericaexon
TCONS_00060426-exon-scaffold_341-1491911889:393258..393386TCONS_00060426-exon-scaffold_341-1491911889:393258..393386Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_341supercontigscaffold_341:393258..401409 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	76.9192	69.3485	42.5203	31.1734	11.1675	13.9686	0	6.58985	3.11258	0	2.03621	2.65545	0	4.82963	0	0	0	3.80059	0	0	0	0	0	3.73245	0	0	0	0
Blast
[Close]
BLAST of TCONS_00060426 vs. Swiss-Prot (Human)
Match: XRN1 (5'-3' exoribonuclease 1 OS=Homo sapiens GN=XRN1 PE=1 SV=1)

HSP 1 Score: 547.74 bits (1410), Expect = 1.456e-179
Identity = 262/364 (71.98%), Postives = 306/364 (84.07%), Query Frame = 1 
Query:   64 MGVPKFYRWLSERYPCLSQVIKEHQIPEFDNLYLDMNGIIHPCSHPNDDDPHFRITEEQIFRNIFNYIEVLFRIIKPKKNFFMAVDGCAPRAKMNQQRSRRFRTAKEAENNIRKAQMKGQTLPKEERFDSNCITPGTEFMARLNNQLKYFVNMKISTDPMWQECTIYLSGHDVPGEGEHKVMDFIRYCKAQPGYDPNTRHCLYGLDADLIMLGLTSHEPHFALLREEVRF-GKQAKRITKPEQQTFXXXXXXXXREYLEFEFGALKSKLHFQYDIENIIDDWILLGFLVGNDFVPHLPNFHINHDALPYLYGVYKDFLLTTDGYLHNGGYINLHRMKKFFEFLSKFDLNNFEEKYEDFKWLQSK 1152
            MGVPKFYRW+SERYPCLS+V+KEHQIPEFDNLYLDMNGIIH CSHPNDDD HFRI++++IF +IF+Y+EVLFRIIKP+K FFMAVDG APRAKMNQQR RRFR+AKEAE+ I+KA  KG+TLP E RFDSNCITPGTEFMARL+  LKYFVNMKISTD  WQ  TIY SGH+ PGEGEHK+M+FIR  KA+P +DPNTRHCLYGLDADLIMLGLTSHE HF+LLREEVRF GK+ +R+  PE+ TFHLLHLSL+REY+++EF  LK K+ F+YDIE IIDDWIL+GFLVGNDF+PHLP+ HINHDALP LYG Y   L    GY++  G++NL R +K+   LS FD  +F E + D KW +SK
Sbjct:    1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFESK 364
The following BLAST results are available for this feature:
BLAST of TCONS_00060426 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
XRN11.456e-17971.985'-3' exoribonuclease 1 OS=Homo sapiens GN=XRN1 PE... [more]
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