TCONS_00060673 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060673
Unique NameTCONS_00060673
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1584

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060673 ID=TCONS_00060673|Name=TCONS_00060673|organism=Clytia hemisphaerica|type=transcript|length=1584bp
ATCTCGCTCACCCCATCTCCAAACTTGGAGCCAATGCCTTAGAAAACGGA
TGGCCTACTGATGTCAAAGTCGGTTTGATTGGCAGCTGTACTAACAGCAG
TTATGAAGATATGGGTCGATCTGCCAACTTGGCAAAACAAGCTCTTGCAC
ACGGTGTCAAAGCTAAGTCTATCTTCACCATTACACCAGGATCTGAACAG
ATCCGTGCCACCATCGAACGAGATGGTATTGCTGATACCCTCCGTGAATT
CGGAGGTGTTGTTTTGGCCAACGCTTGTGGACCTTGTATCGGACAATGGG
ACAGACAAGATGTCCCAAAAGGCGAGAAGAACACTATCGTTTCCTCATAC
AACCGTAACTTTACTGGACGTAACGACGCTAACCCGATGACCCACGCTTT
CGTAACCTCCCCTGAAATGGTCACCGCCCTCTCCATCGCAGGTGACTTGC
GATTCAACCCATCTACCGATGACTTAGTGGGTGCCGATGGACAAAAATTC
AAGCTGGAAAGCCCATTCGCTGACGAACTCCCCGTCAATGGATTCGACCC
GGGCATGAACACATACCAAGCTCCCCCATCTGATGGAGGCTCCCTTAAAG
TTGACGTCGACCCTCAATCACAACGTCTACAATTGTTGACACCTTTCAAT
ACTTTTGACGGACAAGATTTGGTTGATATGCCCATCCTTATTAAGGCTAA
AGGTAAATGCACGACGGATCACATCAGTATGGCTGGACCATGGTTGAAAT
ACAGAGGTCACTTGGACAACATCTCTAACAATATGTTAATCGGAGCTATC
AACGAAGAGAATGGCGAAGCTAACACCGTCAAGAATCAATTTACCGGTGA
ATATGGAGCCGTGCCAGACACCGCTCGTCAATATAAGGCTCAAGGTATTG
GATGGGTGGTCGTTGGAGACGAGAACTATGGAGAAGGAAGCAGTCGTGAA
CACGCTGCTCTCGAACCAAGACATTTAGGAGGAAAAGCCATTATTGTTAA
ATCCTTCGCCCGTATCCATGAAACGAACTTAAAGAAACAAGGAATGCTTC
CATTGACCTTCGAAACCGCTTCCGATTATGATAAAATCACACCCACAGAT
CGCATCTCACTCCTCGGACTAAAGGATATCGCCCCCggaaaaccaattaC
ATGTGAGATCACGCACGCTGACGGCGGCAAAGAACAAATCACATTATTGC
ACACAATGAACGAAGGCCAAATCGGGTGGTTCAAGTCCGGTTCTGCTCTC
AACAAAATGGCTGGCAAATAAgttcaaccaaaaaaaaaatcgcaaaaaat
taaagattttgatATATTGCGCACACGTCCGAATTTTTTATTAAATGTTT
ATCTCACTGCTGCTGGCTGCGTTTTTATGTAATTTTATTTGGAGCCATTT
TCTTCCACGCCACCTTATAGTTTTCTTTGTAAATGTCAGTTGTCAAAAAT
TAAATGTCAGATAATatacaatattattatttttaactatctcaaattat
ttcaaattatttttctgtttCTACTAAGTTTATATTATTATAGAATTTAG
CTCTACCCACActtggtatagagcactttgtTTC
Run BLAST on NCBI

transcript from alignment at scaffold_348:123504..132286-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060673 ID=TCONS_00060673|Name=TCONS_00060673|organism=Clytia hemisphaerica|type=transcript|length=8783bp|location=Sequence derived from alignment at scaffold_348:123504..132286- (Clytia hemisphaerica)
ATCTCGCTCACCCCATCTCCAAACTTGGAGCCAATGCCTTAGAAAACGGA
TGGCCTACTGATGTCAAAGTCGGTATGTTATAAAAAAAATCTCTCTCGAT
ATTATTTGAAGAATTTGATTTGCTACATAATTTGTCTTGTTGGCACGTAG
CTTGCTAAAGATAAGCAATAAAGGAGTTCTTTTGATTGTTTTCTTTAAAG
CCTTTATTAAGTTTTTCAGAAGAAATAAAAATATATGGGACATAAGACGT
TGGAGTTTAAAGACCAATACTACAATCATGGACGAAAATTGTGAGACAAC
CCTCCTTCCCTCCCTTCCCCCCCTTCCCCCCAGTGGCAATGTTGAAGGGC
ATTGGAAAAGTCGGTGGGAAGGTCGTTCGCACTAAACANCTTTTTATCTA
TCGAAAGGCAATTACTCACGATTTATCTCGTGTTTGATTGCCTACCAGGA
GGTGTGTTTAGGGGTTACTTCTATGTGATGCTATCATGTTTCAAACAAAC
GTAAAAAAATGTTATCAAAAATAACTTCGTTGTTCCTTCCGTTTGTGTGG
ACTTTGTCCCCTTTTGTCCTAGAGGATTTACCTAAAATAGTGTTTATTCT
AGTAAATAGATCTCTTACTGTAAAAAAAGAATGATTACATTTTACAGTAT
ATTTAAAGTGTTATTGATAACAAGCTTTTATAGTGAATTTACTAGGGATG
TTTTTCTTTCACTTCTATTGGATGATATATTCAACGATCTCCCAATTAAG
TGACAGTGTTTACATTCTACATTTCGTTCTGCATTTTATCAAACATCTGT
AACTCGAGTAGAATAACATTTCAAGAGGTCATATAGTACATTACCAACAT
GCTAAAGCACGAGCACTTACACGTGGCTCATACAGCTTTCATGATATTAG
CTCCCACAGGCTCCCTCAGACCACCAAAAGGGAAAGAACCTGATCTTTTT
ATCATGATTCAAAGTATAACTATGCGAACTAAATCGCATTGTTTTCCGCA
TACTTACTGCTATCATCCTAGATCATTTCGAAACACCTATATGTACTATA
TGTGTATTCACTGTAAAAAGTCTATACTTTTAATAAAAATTGTAAAACTT
ACTACATTTCAAGAGGGTACATGTCTCGTAAATTTAAATTCTAGCTAGGT
GATTTTGTTTCCTAATCTTCAGCCTCATTCTGCATATATCATCTCTCGCT
GTATTTACGATTTTCTTTAATGATTATCAATTAATACTTTTTAAAAAGGA
TTGAATTATTTTCATGCCATTTCCTACCATTTATTTTAGTTGGAACCACA
CGTCAACGGACCTTTCACACCAGATCTCGCTCACCCCATCTCCAAACTTG
GAGCCAATGCCTTAGAAAACGGATGGCCTACTGATGTCAAAGTCGGTATG
TTATAAAAAAAATCTCTCTCGATATTATTTGAAGAATTTGATTTGCTACA
TAATTTGTCTTGTTGGCACGTAGCTTGCTAAAGATAAGCAATAANATCTC
CCGTTATTATTGAAGAATTTGATTTGCTACATAATTTGTCTTGTTGGCAC
TTAGCTAGCTAAAGATAAGCAATAAAGGAGTTCTTTTGATCGTTTGCTTT
AAAGCCTTTTTTAAGTTTTTCAGAAGAAATAAAAATATATGGGACAGAAG
ACGTTGGAGTTTAGAGACCAATACTGATATGTTTAAACTCTTTTTTTTCG
TGTATGTTGTATATGAATTCTTCCGATTCTAGGTTTGATTGGCAGCTGTA
CTAACAGCAGTTATGAAGATATGGGTCGATCTGCCAACTTGGCAAAACAA
GCTCTTGCACACGGTGTCAAAGCTAAGTAAGCAGGGGGGAACTTTTGCAA
ACTAGTGACTTTAATTGTCAAACATCCTCAGTGTGTGTGGATCCATAGCT
TCTCCTTTCCCACTTAAAAAGTGGTATTTCTTTTGTATGCGGAGTGATTC
AAAATCGATCTACGCTGCGCAGGTCGAAAAAACCTTCAATGTTTGATATT
TGATAAGGATTCAGATGTTTAAAAGGTGCATATGACCCCCGTCACGAGTG
ATACAAAAATACATTTTCAATTAATACGCTTTATTTGATCCATCAGGTCT
ATCTTCACCATTACACCAGGATCTGAACAGATCCGTGCCACCATCGAACG
AGATGGTATTGCTGATACCCTCCGTGAATTCGGAGGTGTTGTTTTGGCCA
ACGCTTGTGGACCTTGTATCGGACAATGGGACAGGTACGGTGTCATAATT
AGTGACTTCCTCATTGTAGTTAGTACACACTAACAGAAGGTCATTTTTAA
AGTTGGAAAATCAGCCATTCTTTTATCAGAAGGAACACAAAAATCGGAAG
TTGAGCACAAACGCCCCTGGAAATCTCACAATCTATCGCGAAATATTTAA
GCTTCTATACTTAAATGAATATTATGACTTTTCTCAGAAATATTTGAGAA
GGCAATTATCAACTAGCCCCCCTTTATTTAATTTTTTCCAATATCTTTCT
TTACTTGTAGACAAGATGTCCCAAAAGGCGAGAAGAACACTATCGTTTCC
TCATACAACCGTAACTTTACTGGACGTAACGACGCTAACCCGATGACCCA
CGCTTTCGTAACCTCCCCTGAAATGGTCACCGCCCTCTCCATCGCAGGTA
CGTCAACTACCTTATCGGCCCTTTTTACGCCGGCCCTTATTGGCGTTATT
TTTAGGCTCTTTGCATAAAAAGGGCCGATATGGTACTTAAGTTTTGAAGA
AAGCGATCAAGGGTTCTTAGTCCTCCTTTCTTCTTTAAAATTGTGCTGTT
AGCAAATGGGGGTACTATAACTTATGATAATTTTATAAATGTTTCTGAAG
AGTTCACAACTGAATAACAAAAAGTAGAGGAATGATGGTTTTTTTCCATT
TTGTTTTCAATTCTTTTCCACAGGTGACTTGCGATTCAACCCATCTACCG
ATGACTTAGTGGGTGCCGATGGACAAAAATTCAAGCTGGAAAGCCCATTC
GCTGACGAACTCCCCGTCAATGGATTCGACCCGGGCATGAACACATACCA
AGCTCCCCCATCTGATGGAGGCTCCCTTAAAGTTGACGTCGACCCTCAAT
CACAACGTCTACAATTGTTGACACCTTTCAATACTTTTGACGGACAAGAT
TTGGTTGATATGCCCATCCTTATTAAGGTGCCTTCTGTGATTCTTTTAAT
ATCGAAACCCTTATGAACTTGCGGTTAGACCAGAAAGATGAAGAGCAACA
ACAACAACTGCAAAATCACTTCCCTCACAACTACATCAGTAGATAAAGTG
CATTCCCCTTGGTTTGCTTCAAGACGAACCACCTCTTTATTTTTCCACTT
TTGGGTCGGAACAGTCATTGGATTAGATCACATTTCCCTCGAAGTATCAA
CGTTGGAAATCAACGTGACATGATCTTTTCTTCTTTCAGGCTAAAGGTAA
ATGCACAACGGATCACATCAGTATGGCTGGACCATGGTTGAAATACAGAG
GTCACTTGGACAACATCTCTAACAATATGTTAATCGGGTGAGATGGTTAT
TATCTCTTGTCTTATGAAAATATCTCAGGCAAAATGATTAAAATAGCAAG
TCTAACTAGGCATNTCACAAACGCCCCTGGAAATCTCACAATCTATCGCG
AAATATTTAAGCTTCTATACAGTATGTGGCCCCCAAAACGGCGATCAAAT
TTGAAATTTCTCTCGAATCTAGAGGAAAAGATATTTTACAAAAATTTTTG
CTGCATGAAAACCTTTAACATCTCTACTTTATTTCCTGGAAGTTCTTTTT
CAAAATTTCCAATTTCAACAATATTTTTCAATCGCTTAAAGATAGGTAGC
TTTTTTCTAATGGCCCCCAAAACGGAGGTTTGAAATTTTAGCGATTTCTC
GAGCTTTAAGATATGAATACAAAATTTTGACCATAGTTTTGAAATATGAT
TTAGAGGGTTTTAGGCATAAATTTATTTGATAAAATTTTTACAGTATACC
CCTGGTTGTCAAAATGCAGGTTTGGGGCCCCCAGAACGGAGGTGTAGTTA
AAATCAAATTATTAGGCCCAGTGGTAATAGGGGGAAAAACTATGAACATA
TTTGTGTTTCCCCTTAAATTTACGACCTGATGGATGTAAAATTTATGATT
TTTATGAAATATTTCAAGATTTTCGATATTGCCAAGTCCAAACTGAAAAT
TTAGAAATTTTCAAAATGACAATTTTGATTTAACAACGTCTTAATCAAGT
TTTTGAAAACAAATCTCTTTTGAAAATAGTTCCATTCATGTATGGAATAA
GCTGTGAAAATTTTAGAAAAAAAGCTTAATTGAAACTGAAACTACTAAGC
TTTAAAGATATTTTGCTCCTATATTTTGCAAAAAAAATGACAGAATTTGC
CGTTTTTGCTGATTCAGCGAAATTTTTGATATATAATGTTATTTTTTTGT
TATAAACTATTAGCTCAAGGTGATAGGAATAGGATTCCAAGATTTTTTGC
TTTTTCTCATATTTAGAATTTTCAGTTTTGTCAATGCTGATTCTAGGGCT
CCAAAATACTGGTTGACCTTCAAAATGCTATATCTTTTACCCAGCCTCTA
AAGTCACAGATGTATCTGCATTTTCTGAACGGCATTAGGTGTAGAAAGTT
TCCTATACCCCGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAATCATTCTTTCAAAATAAACAAAAATCGTTTAATTCTGATAAATCTAC
AAGTCAGAATCTTCATTTTAATGAAAACCTCCGTTTTGGGGGCCGTCTCC
GTTTTGGGGGCCGTCTCCGTTTTGGGGGCCATATACTGTAATTAAATGAA
TATTATGACGTTTCCTCAGAAATATTTGAGAAGGCAATTATCAACTAGCC
CCCCTTTATTTAATTTTTTCCAATATCTTTCTTTACTTGTAGACAAGATG
TCCCAAAAGGCGAGAAGAACACTATCGTTTCCTCATACAACCGTAACTTT
ACTGGACGTAACGACGCTAACCCGATGACCCACGCTTTCGTAACCTCCCC
TGAAATGGTCACCGCCCTCTCCATCGCAGGTACGTCAACTACCTTATCGG
CCCTTTTTACGCCGGCCCTTATTGGCGTTATTTTTAGGCTCTTTGCATAA
AAAGGGCCGATATGGTACTTAAGTTTTGAAGAAAGCGATCAAGGGTTCTT
AGTCCTCCTTTCTTCTTTAAAATTGTGCTGTTAGCAAATGGGGGTACTAT
AACTTATGATAATTTTATAAATGTTTCTGAAGAGTTCACAACTGAATAAC
AAAAAGTAGAGGAATGATGGTTTTTTTCCATTTTGTTTTCAATTCTTTTC
CACAGGTGACTTGCGATTCAACCCATCTACCGATGACTTAGTGGGTGCCG
ATGGACAAAAATTCAAGCTGGAAAGCCCATTCGCTGACGAACTCCCCGTC
AATGGATTCGACCCGGGCATGAACACATACCAAGCTCCCCCATCTGATGG
AGGCTCCCTTAAAGTTGACGTCGACCCTCAATCACAACGTCTACAATTGT
TGACACCTTTCAATACTTTTGACGGACAAGATTTGGTTGATATGCCCATC
CTTATTAAGGTGCCTTCTGTGATTCTTTTAATATCGAAACCCTTATGAAC
TTGCGGTTAGACCAGAAAGATGAAGAGCAACAACAACAACTGCAAAATCA
CTTCCCTCACAACTACATCAGTAGATAAAGTGCATTCCCCTTGGTTTGCT
TCAAGACGAACCACCTCTTTATTTTTCCACTTTTGGGTCGGAACAGTCAT
TGGATTAGATCACATTTCCCTCGAAGTATCAACGTTGGAAATCAACGTGA
CATGATCTTTTCTTCTTTCAGGCTAAAGGTAAATGCACAACGGATCACAT
CAGTATGGCTGGACCATGGTTGAAATACAGAGGTCACTTGGACAACATCT
CTAACAATATGTTAATCGGGTGAGATGGTTATTATCTCTTGTCTTATGAA
AATATCTCAGGCAAAATGATTAAAATAGCAAGTCTAACTAGGCATATCTT
CACATGTTCAAAACTTTCAACTTCTTGATGATTTCATACCTCAGCTGGTT
CAAGATCGTCATTCATTTGAAAATAAACATACTTCTTTTCTTACAGAGCT
ATCAACGAAGAGAATGGCGAAGCTAACACCGTCAAGAATCAATTTACTGG
TGAATATGGAGCCGTGCCAGACACCGCTCGTCAATATAAGGTGAAAGATA
ACAGCGTTATAGTGATTGATGATTTAATATCTTACGAATTCATATTCTTT
GTTTGAAATCGGAATTTGTGTTGTTTTAGATGACAGTGCTTTTGGATTTC
CGATGCAATTTTGACCTATCCCCCTGCGCAAAAAAACAGTTTTCAATTTT
CACAAATTCAATTTCAATTTAATGCAATATTTTCTCTTTGACACAGGCTC
AAGGTATTGGATGGGTGGTCGTTGGAGACGAGAACTATGGAGAAGGAAGC
AGTCGTGAACANGGAAATCAACGTGACATGATCTTTTCTTCTTTCAGGCT
AAAGGTAAATGCACGACGGATCACATCAGTATGGCTGGACCATGGTTGAA
ATACAGAGGTCACTTGGACAACATCTCTAACAATATGTTAATCGGGTGAG
ATGGTTATTATCTCTTGTCTTATGAAAATATCTCAGGCAAAATGATTAAA
ATAGCAAGTCTAACTAGGCATATCTTCACATGTTCAAAACTTTCAACTTC
TTGATGATTTCATACCTCAGCTGGTTCAAGATCGTCATTCATTTGAAAAT
AAACATACTTCTTTTCTTACAGAGCTATCAACGAAGAGAATGGCGAAGCT
AACACCGTCAAGAATCAATTTACCGGTGAATATGGAGCCGTGCCAGACAC
CGCTCGTCAATATAAGGTGAAAGATAACAGCGTTATAGTGATTGATGATT
TAATATCTTACGAATTCATATTCTTTGTTTGAAATCGGAATTTGTGTTGT
TTTAGATGACCGTGTTTTTGAATTTCCGACTTAATTTTGACCTATCCCCC
TGCGCAAAAAACAATGTTTTAACAGCCTATAAGGTTTCTGCGAGGCTTCT
TTCAATTTTCACAAATTCAATTATAATGCAGTTTAATGCAATATTTTCTC
TTTGACACAGGCTCAAGGTATTGGATGGGTGGTCGTTGGAGACGAGAACT
ATGGAGAAGGAAGCAGTCGTGAACACGCTGCTCTCGAACCAAGACATTTA
GGAGGAAAAGCCATTATTGTTAAATCCTTCGCCCGTATCCATGGTGAGTA
AAGGATCGTACTTGCCCAAGGTCTCGCTTCATCTGATTAAATCATTATAC
CCTTTAAGTTTCTTTTTCTTGTCTAAGAACCCAAACTTTCAAAATGATCG
TTGACTGAATTTGCCCATTAACTCAAATTAGAAATGTTAAAAAGCCTCCA
ATAAAATCGTATTTTCTCTAATTTTCATCCAACTTCTTTCAGAGACGGTC
TGCTTGTTGATTCGACAATCTCTTTCCTCCCTTTCAGAAACGAACTTAAA
GAAACAAGGAATGCTTCCATTGACCTTCGAAACCGCTTCCGATTATGATA
AAATCACACCCACAGATCGCATCTCACTCCTCGGACTAAAGGATATCGCC
CCCGGAAAAGTAATTATTTTTAATTATTGTTAATTTATTTTTGAAATTTC
GTAAACCGAGGCTCAACATATGCTTAACCAACGCCTAAGTTTTTTGAGAA
TTGAGCCTGGATATGCTTGTAAGCGTTATGCTTATAAAATGACATGAATG
GAGAAATGATTGCCGAATTCAAGTGACGAGCGAGCTTTCGTTCTTTGATG
ATACGGTGAGACTCCATAACTCGAACCCGCATGAGGAACAGAAATTTGTT
CGAGTTAAGGAAATTTTGAGTTAGAGTAAGGTTTGTAACTGAAGGGGCCA
TAAAACTAGACATTCAAGTTATAGAGGTTCGAGTTAAAGAGACTCCGCTG
TAACAAAATAGATTCCGTCGCATAACTTCTTATTTAATTGAATGAGATAA
GACATGAAAGACTCTGGACAATAATTCAATTTTTTTTTCAGCCAATTACA
TGTGAGATCACGCACGCTGACGGCGGCAAAGAACAAATCACATTATTGCA
CACAATGAACGAAGGCCAAATCGGGTGGTTCAAGTCCGGTTCTGCTCTCA
ACAAAATGGCTGGCAAATAAGTTCAACCAAAAAAAAAATCGCAAAAAATT
AAAGATTTTGATATATTGCGCACACGTCCGAATTTTTTATTAAATGTTTA
TCTCACTGCTGCTGGCTGCGTTTTTATGTAATTTTATTTGGAGCCATTTT
CTTCCACGCCACCTTATAGTTTTCTTTGTAAATGTCAGTTGTCAAAAATT
AAATGTCAGATAATATACAATATTATTATTTTTAACTATCTCAAATTATT
TCAAATTATTTTTCTGTTTCTACTAAGTTTATATTATTATAGAATTTAGC
TCTACCCACACTTGGTATAGAGCACTTTGTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038152XLOC_038152Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060673-exon-scaffold_348-1575043694:132215..132286TCONS_00060673-exon-scaffold_348-1575043694:132215..132286Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1575043694:130461..130554TCONS_00060673-exon-scaffold_348-1575043694:130461..130554Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1575043694:130053..130190TCONS_00060673-exon-scaffold_348-1575043694:130053..130190Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1575043694:126958..127094TCONS_00060673-exon-scaffold_348-1575043694:126958..127094Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1575043694:126428..126681TCONS_00060673-exon-scaffold_348-1575043694:126428..126681Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1575043694:125392..125489TCONS_00060673-exon-scaffold_348-1575043694:125392..125489Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1575043694:125121..125214TCONS_00060673-exon-scaffold_348-1575043694:125121..125214Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1575043694:124744..124876TCONS_00060673-exon-scaffold_348-1575043694:124744..124876Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1575043694:124378..124499TCONS_00060673-exon-scaffold_348-1575043694:124378..124499Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1575043694:123504..123945TCONS_00060673-exon-scaffold_348-1575043694:123504..123945Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1510915933:132215..132286TCONS_00060673-exon-scaffold_348-1510915933:132215..132286Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1510915933:130461..130554TCONS_00060673-exon-scaffold_348-1510915933:130461..130554Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1510915933:130053..130190TCONS_00060673-exon-scaffold_348-1510915933:130053..130190Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1510915933:126958..127094TCONS_00060673-exon-scaffold_348-1510915933:126958..127094Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1510915933:126428..126681TCONS_00060673-exon-scaffold_348-1510915933:126428..126681Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1510915933:125392..125489TCONS_00060673-exon-scaffold_348-1510915933:125392..125489Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1510915933:125121..125214TCONS_00060673-exon-scaffold_348-1510915933:125121..125214Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1510915933:124744..124876TCONS_00060673-exon-scaffold_348-1510915933:124744..124876Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1510915933:124378..124499TCONS_00060673-exon-scaffold_348-1510915933:124378..124499Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1510915933:123504..123945TCONS_00060673-exon-scaffold_348-1510915933:123504..123945Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1491911889:132215..132286TCONS_00060673-exon-scaffold_348-1491911889:132215..132286Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1491911889:130461..130554TCONS_00060673-exon-scaffold_348-1491911889:130461..130554Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1491911889:130053..130190TCONS_00060673-exon-scaffold_348-1491911889:130053..130190Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1491911889:126958..127094TCONS_00060673-exon-scaffold_348-1491911889:126958..127094Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1491911889:126428..126681TCONS_00060673-exon-scaffold_348-1491911889:126428..126681Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1491911889:125392..125489TCONS_00060673-exon-scaffold_348-1491911889:125392..125489Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1491911889:125121..125214TCONS_00060673-exon-scaffold_348-1491911889:125121..125214Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1491911889:124744..124876TCONS_00060673-exon-scaffold_348-1491911889:124744..124876Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1491911889:124378..124499TCONS_00060673-exon-scaffold_348-1491911889:124378..124499Clytia hemisphaericaexon
TCONS_00060673-exon-scaffold_348-1491911889:123504..123945TCONS_00060673-exon-scaffold_348-1491911889:123504..123945Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_348supercontigscaffold_348:123504..132286 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.9304	9.70481	1.42847	28.4007	54.0531	39.3327	67.0031	71.8566	105.532	82.3364	119.963	86.2006	96.2134	95.7701	59.2352	77.7688	159.216	111.881	88.3312	62.1942	0.019697	0.00681386	29.7519	3.13524	124.78	77.5214	11.8838	38.0726	7.77086	5.11232
Blast
[Close]
BLAST of TCONS_00060673 vs. Swiss-Prot (Human)
Match: ACON (Aconitate hydratase, mitochondrial OS=Homo sapiens GN=ACO2 PE=1 SV=2)

HSP 1 Score: 651.744 bits (1680), Expect = 0.000e+0
Identity = 305/419 (72.79%), Postives = 351/419 (83.77%), Query Frame = 3 
Query:    3 LAHPISKLGANALENGWPTDVKVGLIGSCTNSSYEDMGRSANLAKQALAHGVKAKSIFTITPGSEQIRATIERDGIADTLREFGGVVLANACGPCIGQWDRQDVPKGEKNTIVSSYNRNFTGRNDANPMTHAFVTSPEMVTALSIAGDLRFNPSTDDLVGADGQKFKLESPFADELPVNGFDPGMNTYQAPPSDGGSLKVDVDPQSQRLQLLTPFNTFDGQDLVDMPILIKAKGKCTTDHISMAGPWLKYRGHLDNISNNMLIGAINEENGEANTVKNQFTGEYGAVPDTARQYKAQGIGWVVVGDENYGEGSSREHAALEPRHLGGKAIIVKSFARIHETNLKKQGMLPLTFETASDYDKITPTDRISLLGLKDIAPGKPITCEITHADGGKEQITLLHTMNEGQIGWFKSGSALNKM 1259
            LAHP++++G  A + GWP D++VGLIGSCTNSSYEDMGRSA +AKQALAHG+K KS FTITPGSEQIRATIERDG A  LR+ GG+VLANACGPCIGQWDR+D+ KGEKNTIV+SYNRNFTGRNDANP THAFVTSPE+VTAL+IAG L+FNP TD L G DG+KF+LE+P ADELP   FDPG +TYQ PP D     VDV P SQRLQLL PF+ +DG+DL D+ ILIK KGKCTTDHIS AGPWLK+RGHLDNISNN+LIGAIN ENG+AN+V+N  T E+G VPDTAR YK  GI WVV+GDENYGEGSSREHAALEPRHLGG+AII KSFARIHETNLKKQG+LPLTF   +DY+KI P D++++ GLKD  PGKP+ C I H +G +E I L HT NE QI WF++GSALN+M
Sbjct:  357 LAHPVAEVGKVAEKEGWPLDIRVGLIGSCTNSSYEDMGRSAAVAKQALAHGLKCKSQFTITPGSEQIRATIERDGYAQILRDLGGIVLANACGPCIGQWDRKDIKKGEKNTIVTSYNRNFTGRNDANPETHAFVTSPEIVTALAIAGTLKFNPETDYLTGTDGKKFRLEAPDADELPKGEFDPGQDTYQHPPKDSSGQHVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLDNISNNLLIGAINIENGKANSVRNAVTQEFGPVPDTARYYKKHGIRWVVIGDENYGEGSSREHAALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIQGLKDFTPGKPLKCIIKHPNGTQETILLNHTFNETQIEWFRAGSALNRM 775
The following BLAST results are available for this feature:
BLAST of TCONS_00060673 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACON0.000e+072.79Aconitate hydratase, mitochondrial OS=Homo sapiens... [more]
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