TCONS_00060715 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060715
Unique NameTCONS_00060715
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1945

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060715 ID=TCONS_00060715|Name=TCONS_00060715|organism=Clytia hemisphaerica|type=transcript|length=1945bp
aatcttccgCTTGTCTTTCCGTTGAAGTCCAAGGAGCAGTCAACGAAACG
AAGTGCACCAACTTTTGCAGTGGCGAAGCTAAAAAGTTTGTACACGCCGC
TCCAAAAACATTCTTCCATCCACACCTGTACAACAATTGCTCAGCTACAC
GATTAAAGTAATCAATAAAAATGTCACTTCTACGAGCAGGAAAACACAAG
cttGCAATTAAACAGATTTGCCAAAATGTCAGATTCTTGTCAAGTGGATC
AAAGGTTCCCATCagtcattttgacaatgatACATATATGCCCTATGATA
AAATGAGTGACAATCTCAAAATTGTAAAAGACAGACTTGGACGACCACTC
ACTATGTCAGAAAAAGTTGTTTACAGTCACTTGGATGACCCAAAAAATCA
AGACATTGAACGAGGTAGCTCCTACTTGAAACTTCGTCCAGACCGTGTGG
CTATGCAAGATGCTACAGCACAGATGGCCATGCTTCAATTCATCTCCAGT
GGTCTTCCACGAGTTGCTGTTCCATCTACTATTCACTGTGATCACTTGAT
CGAAGCTCAACTTGGCGGAGACAAGGATTTGAACAGAGCCATTGATATCA
ACAAGGAAGTTTACGACTTTTTATCATCAGCAAGTGCCAAGTATGGTGTT
GGTTTCTGGAAGCCTGGATCCGGTATCATCCATCAAattATTCTAGAAAA
CTATGCTTTCCCTGGTTGCCTGTTGATTGGAACTGACAGTCACACCGTAA
ATGGTGGTGGTCTTGGTGGAGCTTGTATTGGTGTTGGTGGAGCTGATGCC
GTGGATGTCATGGCTGGTATCCCATGGGAACTGAAATGTCCAAATGTCAT
TGGTGTCAAACTCACTGGTGAACTTAGTGGATGGACTTCCCCCAAAGATG
TGATCTTGAAGGTTGCTGACATCTTGACCGTCAAAGGAGGGACTGGAGCT
ATTGTTGAATATTATGGCCCAGGTGTCAAATCAATCTCCTGTACTGGAAT
GGGTACAATTTGCAACATGGGTGCTGAAATCGGGGCAACTACATCCATTT
TCCCGTTCAACGAGAGAATGTCTAAATACTTGAACTCTACTGGACGTGCA
GATATCGCTGCCACAGCTGAACAATACCAACACATTTTACAATCTGACGA
GGGAGCTGAATATGATCAAATCATCGAAATTAATCTATCTGAGTTGGAAC
CACACGTCAACGGACCTTTCACACCAGATCTCGCTCACCCCATCTCCAAA
CTTGGAGCCAATGCCTTAGAAAACGGATGGCCTACTGATGTCAAAGTCGG
TTTGATTGGCAGCTGTACTAACAGCAGTTATGAAGATATGGGTCGATCTG
CCAACTTGGCAAAACAAGCTCTTGCACACGGTGTCAAAGCTAAGTCTATC
TTCACCATTACACCAGGATCTGAACAGATCCGTGCCACCATCGAACGAGA
TGGTATTGCTGATACCCTCCGTGAATTCGGAGGTGTTGTTTTGGCCAACG
CTTGTGGACCTTGTATCGGACAATGGGACAGACAAGATGTCCCAAAAGGC
GAGAAGAACACTATCGTTTCCTCATACAACCGTAACTTTACTGGACGTAA
CGACGCTAACCCGATGACCCACGCTTTCGTAACCTCCCCTGAAATGGTCA
CCGCCCTCTCCATCGCAGGTGACTTGCGATTCAACCCATCTACCGATGAC
TTAGTGGGTGCCGATGGACAAAAATTCAAGCTGGAAAGCCCATTCGCTGA
CGAACTCCCCGTCAATGGATTCGACCCGGGCATGAACACATACCAAGCTC
CCCCATCTGATGGAGGCTCCCTTAAAGTTGACGTCGACCCTCAATCACAA
CGTCTACAATTGTTGACACCTTTCAATACTTTTGACGGACAAGATTTGGT
TGATATGCCCATCCTTATTAAGGCTAAAGGTAAATGCACAACGGA
Run BLAST on NCBI

transcript from alignment at scaffold_348:126143..140809-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060715 ID=TCONS_00060715|Name=TCONS_00060715|organism=Clytia hemisphaerica|type=transcript|length=14667bp|location=Sequence derived from alignment at scaffold_348:126143..140809- (Clytia hemisphaerica)
AATCTTCCGCTTGTCTTTCCGTTGAAGTCCAAGGAGCAGTCAACGAAACG AAGTGCACCAACTTTTGCAGTGGCGAAGCTAAAAAGTTTGTACACGCCGC TCCAAAAACATTCTTCCATCCACACCTGTACAACAATTGCTCAGCTACAC GATTAAAGTAATCAATAAAAATGTCACTTCTACGAGCAGGAAAACACAAG GTATTTTTTACTTATTTCTTTGACCCAGCCAATAACAATTCATTTATTGC TATGCGTGTAAAAATGATACATGTCTGCCGAAAATTTACATACGTTGAGA TAATTTTGTATGATATTAACAACACATCCATCTTATGATGACCAATTTAT ATTATTATCCAAATATTTTGATTACGATCTTTGTTGGAGAAATTTTCAGG GTGGTGAAGTATGACACCACGGTGTCAATCGAACTTGTAAGTTTGAACGA AAATCGTGGTCGAACCATGAGCAAGATCGAATAATTGCGATTGGATTGTT GAACCCAATCAAATATCGACCATATTGGCCAATTCCTGGGTATTATTCGA TTGTGTTCGATTGTGCTCGAATGAAGTTTGATCGAGATTCAATTATTTAT GTTTGATAAGATTTGGCTATTCCATTTTTAAACCATACAGGGGTATTGGC AAACCTTTCCAGGGCTGCCAGGAGTAACCTGATAACAGCTGTGGAGTTTT CTTAACGCGACATGCTGAAGCCCTAAAGATGGCTAAAAACTAACATCTGA GGAAAATGGCCGTATCTCTATGGAAAATTTGAGTCAACTTTTTGCCTCGT GCCAAAAACTTAAAAATTAAAATGGCGCTCCATGAAAAGTGCNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCACAA GACAAGGGAGATTAATGTGAGTGAATGTAATCGAAGCAATCGAACAGCAA ATCCTGGGTAATATTCAATTACAATTCAATTGCAATTATTTGATTGTGTT CAGTTGATTTGACGTTCGATTCGTTCGATTGACACCGTCTGGGTATGATA GCGTACTACTAAGATTTTAGAATATTATATTCTATACAATAGATGAAGCT CTCATTTTTAAATTCAGTCCTGGAAAATGCTGTTGTAAAGGCTGAGGTTT TAAAAATAAAGGTTACTGTAGACTGGTATCAGGGTCATTAAACATCTTCC CATTCATGTTGCTTAAGACGTGATCAGGACTATCGGATAATCACTGAAGC AATATTGATTTTCTTTTTGTCTTTCAATATAGTGGCAATTTTTTTGCACA TATTTTTGAGGTATCTCTCCATCAGGCCAAGTTGGATAACGTATTTAGAA AAAATAGAAAACCATGCTGACCAGAAATCTAGGAGGCATGCCTCTTATAA AAATCTCAAAACCTGAATAAAAAGGCAATTTTCCATTATATAAGTAGATC CAAAAATGAAACAATAAAGGTCAATATAAAAATCTTTAAAATATATTTTT TTAATAGTATTACTATTATATTCTAGAGAGATTGAACTCTAATAACCTGT TAGCATGAATCATGTGACCACACTTTTGTACCCTTTCTTTTCTGTGCTGC TCTGTGTAATCTGCAAAACTTAAATTTGTTCCAGGATCGTGCTTGCTACC AAACCATAGTGCAGAAAGGGGTCTGACCCCCCCCTTCTTAAATGATCCCC CCTTCTTGGATTCCCCCTTACCTTTAAAAATGCCTATCCCCCAAGGGTTT TGGGCTAAATGTTTTATGGAAGAAAGGGAAGGGAAACAGTAAAGAAAAAT TAAGTCTGGAAAATATAACACCACTTTTTAGTGAAAATAAAGAACTTCCT TTCAGTTTCATGCAGACCAAATTTCATAACAGTGCTCCCCCTCCTTGCTA TCCCCCCTTCTTGCTACCCCCCCTTTTTAATGAAAATTTCTGATCCCTCC CCTTCTTCACTTTTTTGGAAGGTGTCATCCCCCCCCTTAAGAAAGGGGGG TCCGAAATATGCAAACAATCCAATATCTGAATGAAGATGATTTTATCCTT CATGTTTCTTGAAACCAACAGCACCAATTTGTGTCCAGCCTAGCTATTTA ATGTTAAAATTGTTATCTTCACAAACTTTTAAGGCTCTTTTATCGCCTAC TTTCACAACCATCCCAGCAGTATCATCAATTTGGTCTTTTTTTTTTAAGA TCTCCTGGGCTGTTTTCTTCCCACAATACAGAAATCAAATTGTGGTTATG AGAAACACACTGTGGGTCCGGTAAAGGTGCTATCCATCTGATTCTTTCTC AAGACTATGCTATCTTTGACAATCTATCAAAAGCTATCAAAGCTTTCCCT TCACCGTAGAATGCTCAGGAATATGCGAGACAAAACCTAAAGTAAAACAT TGCTTTCAGAAAGGATTTCAGCATTCTGAACTCAAAGTGCAAGGCTATCT TTGATATCCTCTGCTATGATATCTTTGGGCTGTGAATCATGAATGTGTTT TAATTATTTCATTGTCTCTACTTCTTTCATATAAGACTTATCTAAACTGA GAGGTAGAGGTGTCGGGTTTGCCCCAGATAACAATGTCAGTAATTTGAAC AGCTTAGATCCCTCCAGATGAACTTAGATTTTCTGACATTAGAAGAATAC ACTTTGGTCTACAATACTGTTACTGAAAAGAAATCTTATCTTACAAGCCA GCTGCAGAATCAGCACTGGTGGGAGTGTTTCAGAGAGATCATAATTAAAA TATATGCCCTAGAATATGCCCTAAATGATTTAAAACCAGTCCATTTTCAC AAATGCATTTGATCTTTTTGGATGATTTCTCTGGCTAGTTTGGTTTAAAC ACTAAAAAAAGAAGAAGGAAACAGTATGATTTATTATTGATATTATATTA TTAAAAGGATATACAGTCCAGACACACTAGGGCCTCTAAACTGGTCCATC TACATAATAATTACAAAAGTGATCTTGAATCGTAACTTAATGGGTGCTTT ATCCATGCCTGAGTCGGTTCTTTTTAAAATGCTTTGATTGACTCAGCATT AACAAATTGTTTGCTGGTTCCACGCCGGTATGCATCTGTAATAAAATCAC TTTGTTTGCAAACCCCTTAATAATCCATCATCTGAGAAATTAGGGATCAA TTTGTAATCATGTTTAAGATGGGGACAAGTTTGGTGAGAAAACTTTTTGT CATAAAAGTGAAGGCGTTTGTATATCTGAACCATGTCGCCATAATTGAAA TGAATATATAAATATAGATTTTTTATTTTAGCTTGCAATTAAACAGATTT GCCAAAATGTCAGATTCTTGTCAAGTGGATCAAAGGTTTGCAATTAATTT TTCTTCTGCTTCAATCTATGAAAAGGTTTCTGTTTCTACTGCCATTTTTG ACTTTACCATTCTAAAATGCTTCAATAATTTATGGATTATATTATGTCTA ATTGTTTTTGTTTCTGTTTTATTTCCAGGTTCCCATCAGTCATTTTGACA ATGATACATATATGCCCTATGATAAAATGAGTGACAATCTCAAAATTGTA AAAGACAGGTAGGTAACCTAGTTTCAGTGTTGACTCTCACCCAGCACCTG TTGTCACTCAAAACTTGCAATGAAAACAGTTTTTTTGATTTGTTGAGATT TTGATTTGCTTGACGCTGTAGTATGAGGATATCATGTTCACTGCTATAAT ACCCTGATTTTTTGAAGATGAAAACTGATTATTTACCCTACTTCAGACTT GGACGACCACTCACTATGTCAGAAAAAGTTGTTTACAGTCACTTGGATGA CCCAAAAAATCAAGTAAGTTGTGGAAGGATAAGGTTTTATAGTATTATTA TAGTAATCTGTAAAATTGCAGGTTCTAAAGAAATTCTCACCAGAGGGTGG TACTGAATCAAAAAAATAATCACATGAAATTTTATATCTTATATTATTTT ATGTCTTCAATTTATCGTTTTTTTTTGCATCCCAACAATTGAGGCAAGAT CTTTTTTATTAACATCCCTAATGCTCAATTTTTATAGGACATTGAACGAG GTAGCTCCTACTTGAAACTTCGTCCAGACCGTGTGGCTATGCAAGATGCT ACAGCACAGATGGCCATGCTTCAATTCATCTCCAGTGGTCTTCCACGAGT TGCTGTTCCATCTACTATTCACTGTGATCACTTGATCGAAGCTCAACTTG GCGGAGACAAGGATTTGAACAGAGCCATTGTAAGTCTATTATGTTTCACT TAATTGCAACTTTTCTAACTGTGGAAGGAGACTATAAGTAGCATTTTTAA AACCATGTCTGGATTTGGACATTTCCAGATTCTGCAAAATGGCAGCTAAA GCCTTATCTCATCCTGTGACTGTGAGATTTTGAATATGTATAAATTAACA CATTTTATTGACAGTGCAAACCTTATTAAAGAATGGTCACATGTAAAATT AACTTCTCTTTCTCTGGGAATCTCTTTTGTCTATTTTTACAGCAGCCTTT GATTCTTTGATATTTTTTGTCCCTTTTCTCAGGATATCAACAAGGAAGTT TACGACTTTTTATCATCAGCAAGTGCCAAGTATGGTGTTGGTTTCTGGAA GCCTGGATCCGGTATCATCCATCAAGTATGTATACATATATAAGAGTTGA TTGTTTATTATATTCTTCTCCAAATTAAGATTTAACAGTCCCAGTCCCAG ATCTACAATACATTAGGCAGTTCTCAAGTTATAGCCAACGTAAACTTAGC AAAGCTGACCAAAACAGTTTTCATTTTTGTCAATTTGCTTCAGATCAATT TTTATNTCAAAACTTGCAATGAAAACAGTTTATTTGATTTGTTGAGATTT TGATTTGCTTGACGCTGTAGTATGAGGATATCATGTTCACTGCTATAATA CCCTGATTTTTTGAAGATGAAAACTGATTATTTACCCTACTTCAGACTTG GACGACCACTCACTATGTCAGAAAAAGTTGTTTACAGTCACTTGGATGAC CCAAAAAATCAAGTAAGTTGTGGAAGGATAAGTTTTTATAGTATTATTAT AGTAATCTGTAAAATTGCAGGTTCTAAAGAAATTCTCACCAGAGGGTGGT ACTGCATCAAAAAAATAATCACATGAAATTTTATATCTTATATTATTTTA TGTCTTCAATTTATCGTTTTTTTTGCATCCCAACAATTGAGGCAAGATCT TTTTTATTAACATCCCTAATGCTCAATTTTTATAGGACATTGAACGAGGT AGCTCCTACTTGAAACTTCGTCCAGACCGTGTGGCTATGCAAGATGCTAC AGCACAGATGGCCATGCTTCAATTCATCTCCAGTGGTCTTCCACGAGTTG CTGTTCCATCTACTATTCACTGTGATCACTTGATCGAAGCTCAACTTGGC GGAGACAAGGATTTGAACAGAGCCATTGTAAGTCTATTATGTTTCACTTA ATTGCAACTTTTCTAACTGTGGAAGGAGACTATAAGTAGCATTTTTAAAA CCATGTCTGGATTTGGACATTTCCAGATTCTGCAAAATGGCAGCTAAAGC CTTATCTCATCCTGTGACTGTGAGATTTTGAATATGTATAAATTAACACA TTTTATTGACAGTGCAAACCTTATTAAAGAATGGTCACATGTAAAATTAA CTTCTCTTTCTCTGGGAATCTCTTTTGTCTATTTTTACAGCAGCCTTTGA TTCTTTGATATTTTTTGTCCCTTTTCTCAGGATATCAACAAGGAAGTTTA CGACTTTTTATCATCAGCAAGTGCCAAGTATGGTGTTGGTTTCTGGAAGC CTGGATCCGGTATCATCCATCAAGTATGTATACATATATAAGAGTTGATT GTTTATTATATTCTTCTCCAAATTAAGATTTAACAGTCCCAGTCCCAGAT CTACAATACATTAGGCAGTTCTCAAGTTATAGCCAACGTAAACTTAGCAA AGCTGACCAAAACAGTTTTCATTTTTGTCAATTTGCTTCAGATCAATTTT TATTCACAAGTCTACCTGAAAGATGTACTATACCTGTAATAATACATATT TTATGTGGTCATTGTTTTTTCATTTTTTCAGATTATTCTAGAAAACTATG CTTTCCCTGGTTGCCTGTTGATTGGAACTGACAGTCACACCGTAAATGGT GGTGGTCTTGGTGGAGCTTGTATTGGTGTTGGTGGAGCTGATGCCGTGGA TGTCATGGCTGGTATCCCATGGGAACTGAAATGTCCAAATGTATACAAGA ATTCGATTTTGTTAATATTTTCTTTCTTGGAACATCACATAGGGCCTAGC GAGGAAGGGACAAAAAATCTAAACTTTTAATTGTTTCTCAGTGTTTGTAT CATGCTTCTTTCATGCTTTTCTTTTTTGCTTGTTTCTCATTTTGGAAGGT CAAAATGCGGAGTAATGTCCTTTTCTGCTTTCTTTCTCTTTTCTGGTTTG TATCTTTTCCATGCATTATTGAGAAAAAGATTTGTGTTACTTCTACAATC AGGTCATTGGTGTCAAACTCACTGGTGAACTTAGTGGATGGACTTCCCCC AAAGATGTGATCTTGAAGGTTGCTGACATCTTGACCGTCAAAGGAGGGAC TGGAGCTATTGTTGAATATTATGGCCCAGGTGTCAAATCAATCTCCTGTA CTGGTGAGTAATATTTGTAGAATGGTTGAAAAGAGTACTCTGATCAGGAA ATTGTCGGTTTAGATTTGATAGAAGTTATGTATGTATGTATGTGTAATGA CCCTACTAATTTGGTATATATGTGACCCACTAAACCTAACCTACCTCTAA ATGCCTTTTGTGGATCTGGAGTTGCTCAAAACCTAGACTTCTTTAGACTG AAGACTACTTCAACAGTATTGATACAGATAGGAATCCGTTGATCTGGTTT TTAGTAGAGCACTAACCAGGATATTGCATTAATATTATTTCTAAAAGAAA TGAAATAATATTTGAAATTATGTAGGATTATTCTTTCTCATTAAGACTAG AATGAAGAACTTGAAATTAGAAGTTGAATTGTCAAATTTTATTACAGGAA TGGGTACAATTTGCAACATGGGTGCTGAAATCGGGGCAACTACATCCATT TTCCCGTTCAACGAGAGAATGTCTAAATACTTGAACTCTACTGGACGTGC AGATATCGCTGCCACAGCTGAACAATACCAACACATTTTACAATCTGACG AGGGAGCTGAATATGATCAAATCATCGAAATTAATCTATCTGAGGTATGG CGACATTGATATTTTCTGAGCTGTGAACTTCGATCTAAAGAAGGGAGAAC CCACATGGTTCAATTTAATAGAAAATGCTCTTTGATACAGGCGATACAGG TGCAGCCTTCTGTGAGACTGTCTTCGAAATTTTAACTATCTTATTATTTA GAAGATCTCTTGGTTCAAGCGGATTCCAAGCAATTAAAATTAAGGTTTTT TGGGGTCTGGTGTATTTTCAGTTTTCTGTTTTCTGTTGAGCAGTAGTTTG CATTTTGTAAAGGATGATATTTTCATACAACTTTTTATCTATCGAAAGGC AATTACTCACGATTTATCTCGTGTTTGATTGCCTACCAGGAGGTGTGTTT AGGGGTTACTTCTATGTGATGCTATCATGTTTCAAACAAACGTAAAAAAA TGTTATCAAAAATAACTTCGTTGTTCCTTCCGTTTGTGTGGACTTTGTCC CCTTTTGTCCTAGAGGATTTACCTAAAATAGTGATTCTAGTAAATAGATC TCTTACTGTAAAAAAAGAATGATTACATTTTACAGTATATTTAAAGTGTT ATTGATAACAAGCTTTTATAGTGAATTTACTAGGGATGTTTTTCTTTCAC TTCTATTGGATGATATATTCAACGATCTCCCAATTAAGTGACAGTGTTTA CATTCTACATTTCGTTCTGCATTTTATCAAACATCTGTAACTCGAGTAGA ATAACATTTCAAGAGGTCATATAGTACATTACCAACATGCTAAAGCACGA GCACTTACACGTGGCTCATACAGCTTTCATGATATTAGCTCCCACAGGCT CCCTCAGACCACCAAAAGGGAAAGAACCTGATCTTTTTATCATGATTCAA AGTATAACTATGCGAACTAAATCGCATTGTTTTCCGCATACTTACTGCTA TCATCCTAGATCATTTCGAAACACCTATATATGTACTATATGTGTATTCA CTGTAAAAATATATAGAAGTCTATACTTTTAATAAAAATTGTAAAACTTA CTACATTTCAAGAGGGTACATGTCTCGTAAATTTAAATTCTAGCTAGGTG ATTTTGTTTCCTAATCTTCAGCCTCATTCTGCATATATCATCTCTCGCTG TATTTGCGATTTTCTTCAATGATTATCAATTAATACTTTTTAAAAAGGTA TTGAATTATTTTCATGCCATTTCCTACCATTTATTTTAGTTGGAACCACA TGTCAACGGACCTTTCACACCAGATCTCGCTCACCCCATCTCCAAACTTG GAGCCAATGCCTTAGAAAACGGATGGCCTACTGATGTCAAAGTCGGTATG TTATAAAAAAAATCTCTCTCGATATTATTTGAAGAATTTGATTTGCTACA TAATTTGTCTTGTTGGCACGTAGCTTGCTAAAGATAAGCAATAAAGGAGT TCTTTTGATTGTTTTCTTTAAAGCCTTTATTAAGTTTTTCAGAAGAAATA AAAATATATGGGACATAAGACGTTGGAGTTTAAAGACCAATACTACAATC ATGGACGAAAATTGTGAGACAACCCTCCTTCCCTCCCTTCCCCCCCTTCC CCCCAGTGGCAATGTTGAAGGGCATTGGAAAAGTCGGTGGGAAGGTCGTT CGCACTAAACANCTTTTTATCTATCGAAAGGCAATTACTCACGATTTATC TCGTGTTTGATTGCCTACCAGGAGGTGTGTTTAGGGGTTACTTCTATGTG ATGCTATCATGTTTCAAACAAACGTAAAAAAATGTTATCAAAAATAACTT CGTTGTTCCTTCCGTTTGTGTGGACTTTGTCCCCTTTTGTCCTAGAGGAT TTACCTAAAATAGTGTTTATTCTAGTAAATAGATCTCTTACTGTAAAAAA AGAATGATTACATTTTACAGTATATTTAAAGTGTTATTGATAACAAGCTT TTATAGTGAATTTACTAGGGATGTTTTTCTTTCACTTCTATTGGATGATA TATTCAACGATCTCCCAATTAAGTGACAGTGTTTACATTCTACATTTCGT TCTGCATTTTATCAAACATCTGTAACTCGAGTAGAATAACATTTCAAGAG GTCATATAGTACATTACCAACATGCTAAAGCACGAGCACTTACACGTGGC TCATACAGCTTTCATGATATTAGCTCCCACAGGCTCCCTCAGACCACCAA AAGGGAAAGAACCTGATCTTTTTATCATGATTCAAAGTATAACTATGCGA ACTAAATCGCATTGTTTTCCGCATACTTACTGCTATCATCCTAGATCATT TCGAAACACCTATATGTACTATATGTGTATTCACTGTAAAAAGTCTATAC TTTTAATAAAAATTGTAAAACTTACTACATTTCAAGAGGGTACATGTCTC GTAAATTTAAATTCTAGCTAGGTGATTTTGTTTCCTAATCTTCAGCCTCA TTCTGCATATATCATCTCTCGCTGTATTTACGATTTTCTTTAATGATTAT CAATTAATACTTTTTAAAAAGGATTGAATTATTTTCATGCCATTTCCTAC CATTTATTTTAGTTGGAACCACACGTCAACGGACCTTTCACACCAGATCT CGCTCACCCCATCTCCAAACTTGGAGCCAATGCCTTAGAAAACGGATGGC CTACTGATGTCAAAGTCGGTATGTTATAAAAAAAATCTCTCTCGATATTA TTTGAAGAATTTGATTTGCTACATAATTTGTCTTGTTGGCACGTAGCTTG CTAAAGATAAGCAATAANATCTCCCGTTATTATTGAAGAATTTGATTTGC TACATAATTTGTCTTGTTGGCACTTAGCTAGCTAAAGATAAGCAATAAAG GAGTTCTTTTGATCGTTTGCTTTAAAGCCTTTTTTAAGTTTTTCAGAAGA AATAAAAATATATGGGACAGAAGACGTTGGAGTTTAGAGACCAATACTGA TATGTTTAAACTCTTTTTTTTCGTGTATGTTGTATATGAATTCTTCCGAT TCTAGGTTTGATTGGCAGCTGTACTAACAGCAGTTATGAAGATATGGGTC GATCTGCCAACTTGGCAAAACAAGCTCTTGCACACGGTGTCAAAGCTAAG TAAGCAGGGGGGAACTTTTGCAAACTAGTGACTTTAATTGTCAAACATCC TCAGTGTGTGTGGATCCATAGCTTCTCCTTTCCCACTTAAAAAGTGGTAT TTCTTTTGTATGCGGAGTGATTCAAAATCGATCTACGCTGCGCAGGTCGA AAAAACCTTCAATGTTTGATATTTGATAAGGATTCAGATGTTTAAAAGGT GCATATGACCCCCGTCACGAGTGATACAAAAATACATTTTCAATTAATAC GCTTTATTTGATCCATCAGGTCTATCTTCACCATTACACCAGGATCTGAA CAGATCCGTGCCACCATCGAACGAGATGGTATTGCTGATACCCTCCGTGA ATTCGGAGGTGTTGTTTTGGCCAACGCTTGTGGACCTTGTATCGGACAAT GGGACAGGTACGGTGTCATAATTAGTGACTTCCTCATTGTAGTTAGTACA CACTAACAGAAGGTCATTTTTAAAGTTGGAAAATCAGCCATTCTTTTATC AGAAGGAACACAAAAATCGGAAGTTGAGCACAAACGCCCCTGGAAATCTC ACAATCTATCGCGAAATATTTAAGCTTCTATACTTAAATGAATATTATGA CTTTTCTCAGAAATATTTGAGAAGGCAATTATCAACTAGCCCCCCTTTAT TTAATTTTTTCCAATATCTTTCTTTACTTGTAGACAAGATGTCCCAAAAG GCGAGAAGAACACTATCGTTTCCTCATACAACCGTAACTTTACTGGACGT AACGACGCTAACCCGATGACCCACGCTTTCGTAACCTCCCCTGAAATGGT CACCGCCCTCTCCATCGCAGGTACGTCAACTACCTTATCGGCCCTTTTTA CGCCGGCCCTTATTGGCGTTATTTTTAGGCTCTTTGCATAAAAAGGGCCG ATATGGTACTTAAGTTTTGAAGAAAGCGATCAAGGGTTCTTAGTCCTCCT TTCTTCTTTAAAATTGTGCTGTTAGCAAATGGGGGTACTATAACTTATGA TAATTTTATAAATGTTTCTGAAGAGTTCACAACTGAATAACAAAAAGTAG AGGAATGATGGTTTTTTTCCATTTTGTTTTCAATTCTTTTCCACAGGTGA CTTGCGATTCAACCCATCTACCGATGACTTAGTGGGTGCCGATGGACAAA AATTCAAGCTGGAAAGCCCATTCGCTGACGAACTCCCCGTCAATGGATTC GACCCGGGCATGAACACATACCAAGCTCCCCCATCTGATGGAGGCTCCCT TAAAGTTGACGTCGACCCTCAATCACAACGTCTACAATTGTTGACACCTT TCAATACTTTTGACGGACAAGATTTGGTTGATATGCCCATCCTTATTAAG GTGCCTTCTGTGATTCTTTTAATATCGAAACCCTTATGAACTTGCGGTTA GACCAGAAAGATGAAGAGCAACAACAACAACTGCAAAATCACTTCCCTCA CAACTACATCAGTAGATAAAGTGCATTCCCCTTGGTTTGCTTCAAGACGA ACCACCTCTTTATTTTTCCACTTTTGGGTCGGAACAGTCATTGGATTAGA TCACATTTCCCTCGAAGTATCAACGTTGGAAATCAACGTGACATGATCTT TTCTTCTTTCAGGCTAAAGGTAAATGCACAACGGATCACATCAGTATGGC TGGACCATGGTTGAAATACAGAGGTCACTTGGACAACATCTCTAACAATA TGTTAATCGGGTGAGATGGTTATTATCTCTTGTCTTATGAAAATATCTCA GGCAAAATGATTAAAATAGCAAGTCTAACTAGGCATNTCACAAACGCCCC TGGAAATCTCACAATCTATCGCGAAATATTTAAGCTTCTATACAGTATGT GGCCCCCAAAACGGCGATCAAATTTGAAATTTCTCTCGAATCTAGAGGAA AAGATATTTTACAAAAATTTTTGCTGCATGAAAACCTTTAACATCTCTAC TTTATTTCCTGGAAGTTCTTTTTCAAAATTTCCAATTTCAACAATATTTT TCAATCGCTTAAAGATAGGTAGCTTTTTTCTAATGGCCCCCAAAACGGAG GTTTGAAATTTTAGCGATTTCTCGAGCTTTAAGATATGAATACAAAATTT TGACCATAGTTTTGAAATATGATTTAGAGGGTTTTAGGCATAAATTTATT TGATAAAATTTTTACAGTATACCCCTGGTTGTCAAAATGCAGGTTTGGGG CCCCCAGAACGGAGGTGTAGTTAAAATCAAATTATTAGGCCCAGTGGTAA TAGGGGGAAAAACTATGAACATATTTGTGTTTCCCCTTAAATTTACGACC TGATGGATGTAAAATTTATGATTTTTATGAAATATTTCAAGATTTTCGAT ATTGCCAAGTCCAAACTGAAAATTTAGAAATTTTCAAAATGACAATTTTG ATTTAACAACGTCTTAATCAAGTTTTTGAAAACAAATCTCTTTTGAAAAT AGTTCCATTCATGTATGGAATAAGCTGTGAAAATTTTAGAAAAAAAGCTT AATTGAAACTGAAACTACTAAGCTTTAAAGATATTTTGCTCCTATATTTT GCAAAAAAAATGACAGAATTTGCCGTTTTTGCTGATTCAGCGAAATTTTT GATATATAATGTTATTTTTTTGTTATAAACTATTAGCTCAAGGTGATAGG AATAGGATTCCAAGATTTTTTGCTTTTTCTCATATTTAGAATTTTCAGTT TTGTCAATGCTGATTCTAGGGCTCCAAAATACTGGTTGACCTTCAAAATG CTATATCTTTTACCCAGCCTCTAAAGTCACAGATGTATCTGCATTTTCTG AACGGCATTAGGTGTAGAAAGTTTCCTATACCCCGTTTNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNAATCATTCTTTCAAAATAAACAAAAA TCGTTTAATTCTGATAAATCTACAAGTCAGAATCTTCATTTTAATGAAAA CCTCCGTTTTGGGGGCCGTCTCCGTTTTGGGGGCCGTCTCCGTTTTGGGG GCCATATACTGTAATTAAATGAATATTATGACGTTTCCTCAGAAATATTT GAGAAGGCAATTATCAACTAGCCCCCCTTTATTTAATTTTTTCCAATATC TTTCTTTACTTGTAGACAAGATGTCCCAAAAGGCGAGAAGAACACTATCG TTTCCTCATACAACCGTAACTTTACTGGACGTAACGACGCTAACCCGATG ACCCACGCTTTCGTAACCTCCCCTGAAATGGTCACCGCCCTCTCCATCGC AGGTACGTCAACTACCTTATCGGCCCTTTTTACGCCGGCCCTTATTGGCG TTATTTTTAGGCTCTTTGCATAAAAAGGGCCGATATGGTACTTAAGTTTT GAAGAAAGCGATCAAGGGTTCTTAGTCCTCCTTTCTTCTTTAAAATTGTG CTGTTAGCAAATGGGGGTACTATAACTTATGATAATTTTATAAATGTTTC TGAAGAGTTCACAACTGAATAACAAAAAGTAGAGGAATGATGGTTTTTTT CCATTTTGTTTTCAATTCTTTTCCACAGGTGACTTGCGATTCAACCCATC TACCGATGACTTAGTGGGTGCCGATGGACAAAAATTCAAGCTGGAAAGCC CATTCGCTGACGAACTCCCCGTCAATGGATTCGACCCGGGCATGAACACA TACCAAGCTCCCCCATCTGATGGAGGCTCCCTTAAAGTTGACGTCGACCC TCAATCACAACGTCTACAATTGTTGACACCTTTCAATACTTTTGACGGAC AAGATTTGGTTGATATGCCCATCCTTATTAAGGTGCCTTCTGTGATTCTT TTAATATCGAAACCCTTATGAACTTGCGGTTAGACCAGAAAGATGAAGAG CAACAACAACAACTGCAAAATCACTTCCCTCACAACTACATCAGTAGATA AAGTGCATTCCCCTTGGTTTGCTTCAAGACGAACCACCTCTTTATTTTTC CACTTTTGGGTCGGAACAGTCATTGGATTAGATCACATTTCCCTCGAAGT ATCAACGTTGGAAATCAACGTGACATGATCTTTTCTTCTTTCAGGCTAAA GGTAAATGCACAACGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038152XLOC_038152Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060715-exon-scaffold_348-1575043694:140610..140809TCONS_00060715-exon-scaffold_348-1575043694:140610..140809Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1575043694:137425..137478TCONS_00060715-exon-scaffold_348-1575043694:137425..137478Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1575043694:137202..137281TCONS_00060715-exon-scaffold_348-1575043694:137202..137281Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1575043694:136947..137013TCONS_00060715-exon-scaffold_348-1575043694:136947..137013Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1575043694:136531..136722TCONS_00060715-exon-scaffold_348-1575043694:136531..136722Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1575043694:134937..135029TCONS_00060715-exon-scaffold_348-1575043694:134937..135029Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1575043694:134520..134678TCONS_00060715-exon-scaffold_348-1575043694:134520..134678Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1575043694:134107..134257TCONS_00060715-exon-scaffold_348-1575043694:134107..134257Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1575043694:133516..133712TCONS_00060715-exon-scaffold_348-1575043694:133516..133712Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1575043694:130892..130997TCONS_00060715-exon-scaffold_348-1575043694:130892..130997Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1575043694:130461..130554TCONS_00060715-exon-scaffold_348-1575043694:130461..130554Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1575043694:130053..130190TCONS_00060715-exon-scaffold_348-1575043694:130053..130190Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1575043694:129640..129776TCONS_00060715-exon-scaffold_348-1575043694:129640..129776Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1575043694:129110..129363TCONS_00060715-exon-scaffold_348-1575043694:129110..129363Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1575043694:126143..126165TCONS_00060715-exon-scaffold_348-1575043694:126143..126165Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1510915933:140610..140809TCONS_00060715-exon-scaffold_348-1510915933:140610..140809Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1510915933:137425..137478TCONS_00060715-exon-scaffold_348-1510915933:137425..137478Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1510915933:137202..137281TCONS_00060715-exon-scaffold_348-1510915933:137202..137281Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1510915933:136947..137013TCONS_00060715-exon-scaffold_348-1510915933:136947..137013Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1510915933:136531..136722TCONS_00060715-exon-scaffold_348-1510915933:136531..136722Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1510915933:134937..135029TCONS_00060715-exon-scaffold_348-1510915933:134937..135029Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1510915933:134520..134678TCONS_00060715-exon-scaffold_348-1510915933:134520..134678Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1510915933:134107..134257TCONS_00060715-exon-scaffold_348-1510915933:134107..134257Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1510915933:133516..133712TCONS_00060715-exon-scaffold_348-1510915933:133516..133712Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1510915933:130892..130997TCONS_00060715-exon-scaffold_348-1510915933:130892..130997Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1510915933:130461..130554TCONS_00060715-exon-scaffold_348-1510915933:130461..130554Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1510915933:130053..130190TCONS_00060715-exon-scaffold_348-1510915933:130053..130190Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1510915933:129640..129776TCONS_00060715-exon-scaffold_348-1510915933:129640..129776Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1510915933:129110..129363TCONS_00060715-exon-scaffold_348-1510915933:129110..129363Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1510915933:126143..126165TCONS_00060715-exon-scaffold_348-1510915933:126143..126165Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1491911889:140610..140809TCONS_00060715-exon-scaffold_348-1491911889:140610..140809Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1491911889:137425..137478TCONS_00060715-exon-scaffold_348-1491911889:137425..137478Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1491911889:137202..137281TCONS_00060715-exon-scaffold_348-1491911889:137202..137281Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1491911889:136947..137013TCONS_00060715-exon-scaffold_348-1491911889:136947..137013Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1491911889:136531..136722TCONS_00060715-exon-scaffold_348-1491911889:136531..136722Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1491911889:134937..135029TCONS_00060715-exon-scaffold_348-1491911889:134937..135029Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1491911889:134520..134678TCONS_00060715-exon-scaffold_348-1491911889:134520..134678Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1491911889:134107..134257TCONS_00060715-exon-scaffold_348-1491911889:134107..134257Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1491911889:133516..133712TCONS_00060715-exon-scaffold_348-1491911889:133516..133712Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1491911889:130892..130997TCONS_00060715-exon-scaffold_348-1491911889:130892..130997Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1491911889:130461..130554TCONS_00060715-exon-scaffold_348-1491911889:130461..130554Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1491911889:130053..130190TCONS_00060715-exon-scaffold_348-1491911889:130053..130190Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1491911889:129640..129776TCONS_00060715-exon-scaffold_348-1491911889:129640..129776Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1491911889:129110..129363TCONS_00060715-exon-scaffold_348-1491911889:129110..129363Clytia hemisphaericaexon
TCONS_00060715-exon-scaffold_348-1491911889:126143..126165TCONS_00060715-exon-scaffold_348-1491911889:126143..126165Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_348supercontigscaffold_348:126143..140809 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
46.4602 43.2626 40.7806 18.6441 7.9856e-05 8.34732e-05 0.0704229 2.71735 152.177 146.301 186.548 161.027 148.15 131.884 104.075 137.318 206.076 172.734 79.8748 94.2797 81.0781 83.863 25.8906 56.132 92.2181 55.716 40.4134 52.8249 35.5323 43.9335
Blast
BLAST of TCONS_00060715 vs. Swiss-Prot (Human)
Match: ACON (Aconitate hydratase, mitochondrial OS=Homo sapiens GN=ACO2 PE=1 SV=2)

HSP 1 Score: 864.374 bits (2232), Expect = 0.000e+0
Identity = 432/569 (75.92%), Postives = 490/569 (86.12%), Query Frame = 3
Query:  237 LSSGSKVPISHFDNDTYMPYDKMSDNLKIVKDRLGRPLTMSEKVVYSHLDDPKNQDIERGSSYLKLRPDRVAMQDATAQMAMLQFISSGLPRVAVPSTIHCDHLIEAQLGGDKDLNRAIDINKEVYDFLSSASAKYGVGFWKPGSGIIHQIILENYAFPGCLLIGTDSHTXXXXXXXXXXXXXXXXXXXXXXXXIPWELKCPNVIGVKLTGELSGWTSPKDVILKVADILTVKGGTGAIVEYYGPGVKSISCTGMGTICNMGAEIGATTSIFPFNERMSKYLNSTGRADIAATAEQYQHILQSDEGAEYDQIIEINLSELEPHVNGPFTPDLAHPISKLGANALENGWPTDVKVGLIGSCTNSSYEDMGRSANLAKQALAHGVKAKSIFTITPGSEQIRATIERDGIADTLREFGGVVLANACGPCIGQWDRQDVPKGEKNTIVSSYNRNFTGRNDANPMTHAFVTSPEMVTALSIAGDLRFNPSTDDLVGADGQKFKLESPFADELPVNGFDPGMNTYQAPPSDGGSLKVDVDPQSQRLQLLTPFNTFDGQDLVDMPILIKAKGKCTT 1943
            L   +KV +SHF+ + Y+ YD +  N+ IV+ RL RPLT+SEK+VY HLDDP +Q+IERG SYL+LRPDRVAMQDATAQMAMLQFISSGL +VAVPSTIHCDHLIEAQ+GG+KDL RA DIN+EVY+FL++A AKYGVGFWKPGSGIIHQIILENYA+PG LLIGTDSHT NGGGLGG CIGVGGADAVDVMAGIPWELKCP VIGVKLTG LSGW+SPKDVILKVA ILTVKGGTGAIVEY+GPGV SISCTGM TICNMGAEIGATTS+FP+N RM KYL+ TGR DIA  A++++  L  D G  YDQ+IEINLSEL+PH+NGPFTPDLAHP++++G  A + GWP D++VGLIGSCTNSSYEDMGRSA +AKQALAHG+K KS FTITPGSEQIRATIERDG A  LR+ GG+VLANACGPCIGQWDR+D+ KGEKNTIV+SYNRNFTGRNDANP THAFVTSPE+VTAL+IAG L+FNP TD L G DG+KF+LE+P ADELP   FDPG +TYQ PP D     VDV P SQRLQLL PF+ +DG+DL D+ ILIK KGKCTT
Sbjct:   26 LCQRAKVAMSHFEPNEYIHYDLLEKNINIVRKRLNRPLTLSEKIVYGHLDDPASQEIERGKSYLRLRPDRVAMQDATAQMAMLQFISSGLSKVAVPSTIHCDHLIEAQVGGEKDLRRAKDINQEVYNFLATAGAKYGVGFWKPGSGIIHQIILENYAYPGVLLIGTDSHTPNGGGLGGICIGVGGADAVDVMAGIPWELKCPKVIGVKLTGSLSGWSSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMATICNMGAEIGATTSVFPYNHRMKKYLSKTGREDIANLADEFKDHLVPDPGCHYDQLIEINLSELKPHINGPFTPDLAHPVAEVGKVAEKEGWPLDIRVGLIGSCTNSSYEDMGRSAAVAKQALAHGLKCKSQFTITPGSEQIRATIERDGYAQILRDLGGIVLANACGPCIGQWDRKDIKKGEKNTIVTSYNRNFTGRNDANPETHAFVTSPEIVTALAIAGTLKFNPETDYLTGTDGKKFRLEAPDADELPKGEFDPGQDTYQHPPKDSSGQHVDVSPTSQRLQLLEPFDKWDGKDLEDLQILIKVKGKCTT 594          
The following BLAST results are available for this feature:
BLAST of TCONS_00060715 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACON0.000e+075.92Aconitate hydratase, mitochondrial OS=Homo sapiens... [more]
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