TCONS_00060804 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060804
Unique NameTCONS_00060804
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1588

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060804 ID=TCONS_00060804|Name=TCONS_00060804|organism=Clytia hemisphaerica|type=transcript|length=1588bp
CAAATGATAAAACTTCAATAGTTttgtaaaagaagaaaatcaaggtATTT
CTACAAAAACTTTCTACAGAAAATATACTACGCTACGTTTATATGACAGA
TACGTTCATGACGAATACTTTACAGTGCAGAGTAGCAGCATATTTCTGTA
AACTTGAAACGAATTTTTAGTATAGAAGAAGATATAGTATAGACTGAAGA
TCGTAACGAAAAGTTgcgtgaaactttgagtatcaaACAATTATAATCTC
AACTTCAAGTTATTGCGTAAACTCTGGTTCAAAAATATTTCCGTTAATCT
CACCATGAAATCATCGCGTTTGCAGTTGTTGGTCTTTATATTATGGACTT
TATTATGGCAAGCATCAGCAGCAAGAGATATGTGGGATCCAGTTTTCCAA
AATCATACATCGCGCGTCCAATCAAAACATACAGCGTTAATCACTACGAA
GACGATGcgttttaaaaacataaaagcaGgCTGTATGATGGGGTCTGGCA
CCATTCGAGATGTTTTCGAAACAGAGAGAGGGTGTGCTGAAGTATGCATG
GATGAACCAAGATGTATCACATGGAATCAACCTGACCAGAGCTGTATGAT
TTATGATAAAGTATTTCGAGCCAATCCAAGAAAGGTTTTGTATTACTATG
GTGGCGATTGTATTACCTATGAGGTTTGGAACCCATGTACGGAGAATATG
AATCTTTGTGAGCATGGCAGTATCTGTTCACCCAACCGTTTGACCAAAAC
TTACGAATGCATCAATTGTTCTCTGCCATATACTGGTCAACATTGCAATG
AGACATTTTCTGGTCCTGGAGAAGCCCCACCACCAGCCCCACCACAAGTT
ATCCACGAAGacATTTTACTTGGCCGGAATAAGTCATGCCGATCGTTATT
TCATCACTTTCAAATCGAACATCTGTGGAAAGTATACTATATTCATCCAT
GGAATGACcacagaaaaatcaaagtaCTCTGTAAAAgTCAAGATACAAGA
CTTACAAGTTTAAACTCTGCAAACCTTCTCCCCATTCGAGAAATCAAAGG
CGAGGACCTACAAGATGGCCTTGATATTTCTCAAGTTAGCACTGGCAGTA
TTAGAGTTCATACCTCTTTTATGAAAGCTTTggaaagtctgatacagttc
gACTATATTCTCCTGCATTGCCGACAGAAAAATAGCTCTTTGGCTTATGA
TTTGAATTCGGCACCGTATTTTAAgccttttgattattttttgggACTCA
CTGATGACCGACCCCCAATATACTCTATGGCTTTCCGTGCTCATTATGGT
GACATGGTCCTGGACCCTATTGACGGCTTTCTTTCTGACGCCAATGTAAG
CGTCGATGAAAGAGCCTTTAAGAACATTGTTGTGAATTCAGATGGGAAGA
AATTTACAATGTCTGATGAATCAATGCAATGTTTTGGAGACGATGGCGAC
TGGAAATGGTTTACAATGGATGTTAGGTGAatgctggcacacaacgttgt
ttcgacgttcatctaacgttatatggacgttgtggatgttaaataaacgt
tgaaacaacgttaggTGAATGCTGACCTCtccaagctg
Run BLAST on NCBI

protein sequence of TCONS_00060804-protein

>TCONS_00060804-protein ID=TCONS_00060804-protein|Name=TCONS_00060804-protein|organism=Clytia hemisphaerica|type=polypeptide|length=391bp
MKSSRLQLLVFILWTLLWQASAARDMWDPVFQNHTSRVQSKHTALITTKT
MRFKNIKAGCMMGSGTIRDVFETERGCAEVCMDEPRCITWNQPDQSCMIY
DKVFRANPRKVLYYYGGDCITYEVWNPCTENMNLCEHGSICSPNRLTKTY
ECINCSLPYTGQHCNETFSGPGEAPPPAPPQVIHEDILLGRNKSCRSLFH
HFQIEHLWKVYYIHPWNDHRKIKVLCKSQDTRLTSLNSANLLPIREIKGE
DLQDGLDISQVSTGSIRVHTSFMKALESLIQFDYILLHCRQKNSSLAYDL
NSAPYFKPFDYFLGLTDDRPPIYSMAFRAHYGDMVLDPIDGFLSDANVSV
DERAFKNIVVNSDGKKFTMSDESMQCFGDDGDWKWFTMDVR
Run BLAST on NCBI

transcript from alignment at scaffold_349:793052..798776+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060804 ID=TCONS_00060804|Name=TCONS_00060804|organism=Clytia hemisphaerica|type=transcript|length=5725bp|location=Sequence derived from alignment at scaffold_349:793052..798776+ (Clytia hemisphaerica)
CAAATGATAAAACTTCAATAGTTttgtaaaagaagaaaatcaaggtATTT
CTACAAAAACTTTCTACAGAAAATATACTACGCTACGTTTATATGACAGA
TACGTTCATGACGAATACTTTACAGTGCAGAGTAGCAGCATATTTCTGTA
AACTTGAAACGAATTTTTAGTATAGAAGAAGATATAGTATAGACTGAAGA
TCGTAACGAAAAGTTgcgtgaaactttgagtatcaaACAATTATAATCTC
AACTTCAAGTTATTGCGTAAACTCTGGTTCAAAAATATTTCCGTTAATCT
CACCATGAAATCATCGCGTTTGCAGTTGTTGGTCTTTATATTATGGACTT
TATTATGGCAAGCATCAGCAGCAAGAGATATGTGGGATCCAGTTTTCCAA
AATCATACATCGCGCGTCCAATCAAAACATACAGCGTTAATCACTACGAA
GACGATGcgttttaaaaacataaaagcaGGTAAGGATCTATAGTCTAAGT
ACACCTTTTCGGCTtctggggatcatgtaaaagatttctttcgaaagaaa
ctcacttcaattacaccAAGAAATTACACTTGAAGGTTtttggggaattc
gtaaatagtaaactgcatactgatacagtctgctagacattaatatggta
atatttgctcttcatctttgattctttctacagtgattagactgacacat
gcgcgataaaatctatattattggtcttcagaggttaatatattctttga
aaacttaacctctgatactcagggtagcaaTTGACAgctatggtcgaaaa
ggtgtattagaagCAGTTCAATGCATAATCTACACAATATATTGCCTACC
TGTCATATACCTCGTACATAACGGTCTGCAAACTACAATGTTCAATGTTT
TTGAATTGATTTAATCGCGCatgctttaggcgtacaaactttcgcgagca
gaaactttcgcgaggacgaaaaatcgcgaaattcacgacatttactttcg
cgaatttaacgaaaaaatctttttcgcaagcataaactttcgcgaatcaa
gatgtaaaattgagaattttcacatgaaaaaatggcttagaggggcagat
acttcttggattggcttgaaacatttgtcctttgacttattagtctttta
gcaggctaaaaagtgccataacagttacattttattcaaagtttgagGTT
TTACAGATTTTCtattttgtcaagaatttttcgcgagcataaactttcgc
gaatggtccttcctagaattttttaagacatttactttcgcgaaaagggc
caaaattcgcgataCGCCTAAACGGTTAGGGTTAAggatttttgtttact
ttctgaAAAAGGTTGTATGATATCATGATAGTCAAAGCTTTAGGCTGTGA
ATGAATTAGATAAGATGTAATCCTTATAAGAACCATAGTTgcattgacac
ggatgtggagcaagattggtcagaaagaggaaaagaaaaacacttttttg
cttatatcagcataatataatcgatataacaataggcagacactgtcctg
atatgaaacggacaTTTATGTAAAAATGCCCTCTTTTGACTTCAATGCAa
ttacttttttcaattttttcaagcaTAGATCTTAACAGCCAACTTTGTGT
CCACTTTCTGCGCCTACTCTNTAAGCATAGATTTTAACAGCCAACTTTGT
GTccactttctgcctactctaacaattagaataggcagggtaGAAAGTCG
GccatctaaactagagcttacagtatatgtaaaaataaaatctcaaGGTA
TCTtctgttttgtatttttcaaaggCTGTATGATGGGGTCTGGCACCATT
CGAGATGTTTTCGAAACAGAGAGAGGGTGTGCTGAAGTATGCATGGATGA
ACCAAGATGTATCACATGGAATCAACCTGACCAGAGCTGTATGATTTATG
ATAAAGTATTTCGAGCCAATCCAAGAAAGGTTTTGTATTACTATGGTGGC
GATTGTATTACCTATGAGGTTTGGGTGAGTGATCAAAAACTTCGAAATCA
GTAAAGCATCAAAAGTTTTGTGAACTTTTTTGAACGACTCTCATTTTGAT
TCTGTATAGTAATTTTGAATAAGTTTGAGTGGTTGCTCCACAAAATACTG
ACCATCGTGTTAGCGATTGGCAACGGTTTTTTTGGCACTCTGCATAAGTT
GAGAATTCAAATTcctttctaaatattttttaaaaatcttttcagAAAAA
CATCGGGTGAGCCACCGGGGGGAGGGGGGATTCGATTTTTTAAACGACGG
TATGTTCCGCAAAAGAATTGGGGCTTTCAAAATCAGACCCTTATAGTGTA
GctcttgagcagtgaaaagatACCCTTACAGAGCAATTTACCGAACGTCT
TTACCCTTACAATGGAGTTTGAATGCATTTCTTAGTTTGCTGAAGCTAGC
CAGAAAGAGCCTGAGATGTTgacacaatgtgcaaaacaaatcaaaatggg
tacACCTATAAAGAGGAATAGCTCATCAAATTTTTACTGTCGGCCTTGCA
ATTCAGCAGTCcgaaaacacacccttacagtgtatccagctaaaagaaga
cccttgtagtAAACCCTTACAGTGTTTCGAgagtctcgaaaaacctaccc
ttaaagGTGGCACATATTGtaggtcggaccatatgagtgccccccccccc
ggaatgATGTCTTATTCTCTTATCTGAAAGACATTGCCCGCACATATTTT
GTCACCGATTGCCAGATGTAAACACGCGGATATAACCTCCAAAATCATTT
ATCATCTTATTCAGAACCCATGTACGGAGAATATGAATCTTTGTGAGCAT
GGCAGTATCTGTTCACCCAACCGTTTGACCAAAACTTACGAATGCATCAA
TTGTTCTCTGCCATATACTGGTCAACATTGCAATGAGACATTTTCTGGTC
CTGGTAatacatgatatgcaccactggagagtattctgaaaaaaattttc
catccaatacgtcacttaagcaatagaaaaagtgacgtattgggtggaac
aaaaacagttGCATAATTTCCTGAAGTCAtggcagtggtgcatatcatga
atacactgttgaatctctctaattcgatccctTCTTATTGCAAAAAACGG
AAGACATTGTTTTATGTGAAAACTTAGTCCGTATAAAAACTCTGGTCTGG
AGGCTTAATCATATGATCAAAAAGCGAGCaaaacaaattaattttttaag
cGCAAGTTCAAGTaggaaacaatgaaaataaacaaaaggcttccagaccg
ggttaaaaacaccgagaaaaaaaaaagttaaccaatctctctaatttgat
tttgACTACTATTCTTTCAACACTAAACATAGGAGTAATCTTGCCTCGAa
gtgaaaaagtaaaataaaaggaACAGGAAGTTAGAATAGTGAACAAATTT
CTcgtttttagcgattttgaggTTTTGCAAAAATAGTAGGCCCAGCTTCA
GTGTATAAATCACACTTTGAAAAAAGATGGTGTTTTTTCCTCAGTAGGTA
TGCTACTTATTTAAGACATTTATACGACGTTATATGAGGCCCCAAGCGGT
AACTCTGaacacgatatcacgcaattttttgtcttcaattgCAATCACGc
aaattagcaaaaaaaaaatggctaagtctaaaccaggcttcacggctcaa
aaaataaatttgcaaaCCACGTAATCACGCGACAAAAAAGTCTctatcac
gtcatcacgcaaaccgcttaGGGCCTCTTATATAGATGTATGTTATAAAT
GTTAGATAGACGTTTTATGGAGGCTTTAATATCTTTCATCTATTTTATAG
GAGAAGCCCCACCACCAGCCCCACCACAAGTTATCCACGAAGGTAAAATA
TTCTTGACAGTACTTGTGCGAATTTTCTCTGttacatttttttctgaaat
aatttcagttaacaatgccttataaaccttactcgaaatttccttaactc
ggacAAATTTTCATTCCTCGTGCAGGTTCAAGttacccagccggcacaca
atgtcaaaacaacgtccatgtgacattcataacgtccaaataacgttatt
tgaacgttaaaaataacgttgtgtgccagctggttaTGAAGACTCAACTG
TATGAATACCAAAAGGCTTCGAgaacaaaaattgataaatttttatttta
aattttagtgtattcttttattttttctgatgaaaaatatcttttaatat
tCTACTTGGCTCTGGTTTTCATTGAGCACTCTGCaacatcaatcacaaac
aaTACACTacactattttaaattttagacATTTTACTTGGCCGGAATAAG
TCATGCCGATCGTTATTTCATCACTTTCAAATCGAACATCTGTGGAAAGT
ATACTATATTCATCCATGGAATGACcacagaaaaatcaaagtaCTCTGTA
AAAGTAAGTATTCCGTAGTTTTGACAAgattaaaacacccctgtctcaaa
gccccggtggaactttcttcctcagtggggataaaaactcctattgaaat
cccaatggggatagaaattctattgttccaaagttaaaaaatccagtggg
gatgggtttggagtgcaatttttgaaaattgaatttcgaatggggatgaa
atcaaagtcaatttcccagtggggctgaaatttcagggtattttttccac
cggagatgaaatttttgcaaaattttccagtggggcaggggtcccagcgg
gtctgtgacacaggggtgtctcaaGGCACCGAAGTGGCTAAACTGAAACT
CTTGGAtgagaaatgaagccacttatttcccattcaaaacgcttttctct
gcgttgtttttacaataacaccagattgaaataaaagtcCATTGATATAT
TTCGTAAATAGTCAGTTCTTTAAATgtctggaaatttgaaaaaattcaag
gaaaaaaacATAACCACTTCCTGTTTCAGTGACTTGAAGTTACAATAGTG
AACAAATATCTcgttttttacgatttttacgGTTTTGCAAAATAGTAGGT
CCAGCTTCAGTGTAAAAATCAAACTTAGAAAAGATGGTGTTTTGATCGGT
ATGGacgtattttgattttataggTCAAGATACAAGACTTACAAGTTTAA
ACTCTGCAAACCTTCTCCCCATTCGAGAAATCAAAGGCGAGGACCTACAA
GATGGCCTTGATATTTCTCAAGTTAGCACTGGCAGTATTAGAGTTCATAC
CTCTTTTATGAAAGCTTTggaaagtctgatacagttcgACTATATTCTCC
TGCATTGCCGACAGAAAAATAGCTCTTTGGCTTATGATTTGAATTCGGCA
CCGTATTTTAAgccttttgattattttttgggACTCACTGATGACCGACC
CCCAATATACTCTATGGCTTTCCGTGCTCATTATGGTGACATGGTCCTGG
ACCCTATTGACGGCTTTCTTTCTGACGCCAATGTAAGCGTCGATGAAAGA
GCCTTTAAGAACATTGTTGTGAATTCAGATGGGAAGAAATTTACAATGTC
TGATGAATCAATGCAATGTTTTGGAGACGATGGCGACTGGAAATGGTTTA
CAATGGATGTTAGGTGAatgctggcacacaacgttgtttcgacgttcatc
taacgttatatggacgttgtggatgttaaataaacgttgaaacaacgtta
ggTGAATGCTGACCTCtccaagctg

Coding sequence (CDS) from alignment at scaffold_349:793052..798776+

>TCONS_00060804 ID=TCONS_00060804|Name=TCONS_00060804|organism=Clytia hemisphaerica|type=CDS|length=7056bp|location=Sequence derived from alignment at scaffold_349:793052..798776+ (Clytia hemisphaerica)
ATGAAATCATCGCGTTTGCAGTTGTTGGTCTTTATATTATGGACTTTATT
ATGGCAAGCATCAGCAGCAAGAGATATGTGGGATCCAGTTTTCCAAAATC
ATACATCGCGCGTCCAATCAAAACATACAGCGTTAATCACTACGAAGACG
ATGcgttttaaaaacataaaagcaGgCTGTATGATGGGGTCTGGCACCAT
TCGAGATGTTTTCGAAACAGAGAGAGGGTGTGCTGAAGTATGCATGGATG
AACCAAGATGTATCACATGGAATCAACCTGACCAGAGCTGTATGATTTAT
GATAAAGTATTTCGAGCCAATCCAAGAAAGGTTTTGTATTACTATGGTGG
CGATTGTATTACCTATGAGGTTTGGAACCCATGTACGGAGAATATGAATC
TTTGTGAGCATGGCAGTATCTGTTCACCCAACCGTTTGACCAAAACTTAC
GAATGCATCAATTGTTCTCTGCCATATACTGGTCAACATTGCAATGAGAC
ATTTTCTGGTCCTGGAGAAGCCCCACCACCAGCCCCACCACAAGTTATCC
ACGAAGacATTTTACTTGGCCGGAATAAGTCATGCCGATCGTTATTTCAT
CACTTTCAAATCGAACATCTGTGGAAAGTATACTATATTCATCCATGGAA
TGACcacagaaaaatcaaagtaCTCTGTAAAAgTCAAGATACAAGACTTA
CAAGTTTAAACTCTGCAAACCTTCTCCCCATTCGAGAAATCAAAGGCGAG
GACCTACAAGATGGCCTTGATATTTCTCAAGTTAGCACTGGCAGTATTAG
AGTTCATACCTCTTTTATGAAAGCTTTggaaagtctgatacagttcgACT
ATATTCTCCTGCATTGCCGACAGAAAAATAGCTCTTTGGCTTATGATTTG
AATTCGGCACCGTATTTTAAgccttttgattattttttgggACTCACTGA
TGACCGACCCCCAATATACTCTATGGCTTTCCGTGCTCATTATGGTGACA
TGGTCCTGGACCCTATTGACGGCTTTCTTTCTGACGCCAATGTAAGCGTC
GATGAAAGAGCCTTTAAGAACATTGTTGTGAATTCAGATGGGAAGAAATT
TACAATGTCTGATGAATCAATGCAATGTTTTGGAGACGATGGCGACTGGA
AATGGTTTACAATGGATGTTAGGTGAATGAAATCATCGCGTTTGCAGTTG
TTGGTCTTTATATTATGGACTTTATTATGGCAAGCATCAGCAGCAAGAGA
TATGTGGGATCCAGTTTTCCAAAATCATACATCGCGCGTCCAATCAAAAC
ATACAGCGTTAATCACTACGAAGACGATGcgttttaaaaacataaaagca
GgCTGTATGATGGGGTCTGGCACCATTCGAGATGTTTTCGAAACAGAGAG
AGGGTGTGCTGAAGTATGCATGGATGAACCAAGATGTATCACATGGAATC
AACCTGACCAGAGCTGTATGATTTATGATAAAGTATTTCGAGCCAATCCA
AGAAAGGTTTTGTATTACTATGGTGGCGATTGTATTACCTATGAGGTTTG
GAACCCATGTACGGAGAATATGAATCTTTGTGAGCATGGCAGTATCTGTT
CACCCAACCGTTTGACCAAAACTTACGAATGCATCAATTGTTCTCTGCCA
TATACTGGTCAACATTGCAATGAGACATTTTCTGGTCCTGGAGAAGCCCC
ACCACCAGCCCCACCACAAGTTATCCACGAAGacATTTTACTTGGCCGGA
ATAAGTCATGCCGATCGTTATTTCATCACTTTCAAATCGAACATCTGTGG
AAAGTATACTATATTCATCCATGGAATGACcacagaaaaatcaaagtaCT
CTGTAAAAgTCAAGATACAAGACTTACAAGTTTAAACTCTGCAAACCTTC
TCCCCATTCGAGAAATCAAAGGCGAGGACCTACAAGATGGCCTTGATATT
TCTCAAGTTAGCACTGGCAGTATTAGAGTTCATACCTCTTTTATGAAAGC
TTTggaaagtctgatacagttcgACTATATTCTCCTGCATTGCCGACAGA
AAAATAGCTCTTTGGCTTATGATTTGAATTCGGCACCGTATTTTAAgcct
tttgattattttttgggACTCACTGATGACCGACCCCCAATATACTCTAT
GGCTTTCCGTGCTCATTATGGTGACATGGTCCTGGACCCTATTGACGGCT
TTCTTTCTGACGCCAATGTAAGCGTCGATGAAAGAGCCTTTAAGAACATT
GTTGTGAATTCAGATGGGAAGAAATTTACAATGTCTGATGAATCAATGCA
ATGTTTTGGAGACGATGGCGACTGGAAATGGTTTACAATGGATGTTAGGT
GAATGAAATCATCGCGTTTGCAGTTGTTGGTCTTTATATTATGGACTTTA
TTATGGCAAGCATCAGCAGCAAGAGATATGTGGGATCCAGTTTTCCAAAA
TCATACATCGCGCGTCCAATCAAAACATACAGCGTTAATCACTACGAAGA
CGATGcgttttaaaaacataaaagcaGgCTGTATGATGGGGTCTGGCACC
ATTCGAGATGTTTTCGAAACAGAGAGAGGGTGTGCTGAAGTATGCATGGA
TGAACCAAGATGTATCACATGGAATCAACCTGACCAGAGCTGTATGATTT
ATGATAAAGTATTTCGAGCCAATCCAAGAAAGGTTTTGTATTACTATGGT
GGCGATTGTATTACCTATGAGGTTTGGAACCCATGTACGGAGAATATGAA
TCTTTGTGAGCATGGCAGTATCTGTTCACCCAACCGTTTGACCAAAACTT
ACGAATGCATCAATTGTTCTCTGCCATATACTGGTCAACATTGCAATGAG
ACATTTTCTGGTCCTGGAGAAGCCCCACCACCAGCCCCACCACAAGTTAT
CCACGAAGacATTTTACTTGGCCGGAATAAGTCATGCCGATCGTTATTTC
ATCACTTTCAAATCGAACATCTGTGGAAAGTATACTATATTCATCCATGG
AATGACcacagaaaaatcaaagtaCTCTGTAAAAgTCAAGATACAAGACT
TACAAGTTTAAACTCTGCAAACCTTCTCCCCATTCGAGAAATCAAAGGCG
AGGACCTACAAGATGGCCTTGATATTTCTCAAGTTAGCACTGGCAGTATT
AGAGTTCATACCTCTTTTATGAAAGCTTTggaaagtctgatacagttcgA
CTATATTCTCCTGCATTGCCGACAGAAAAATAGCTCTTTGGCTTATGATT
TGAATTCGGCACCGTATTTTAAgccttttgattattttttgggACTCACT
GATGACCGACCCCCAATATACTCTATGGCTTTCCGTGCTCATTATGGTGA
CATGGTCCTGGACCCTATTGACGGCTTTCTTTCTGACGCCAATGTAAGCG
TCGATGAAAGAGCCTTTAAGAACATTGTTGTGAATTCAGATGGGAAGAAA
TTTACAATGTCTGATGAATCAATGCAATGTTTTGGAGACGATGGCGACTG
GAAATGGTTTACAATGGATGTTAGGTGAATGAAATCATCGCGTTTGCAGT
TGTTGGTCTTTATATTATGGACTTTATTATGGCAAGCATCAGCAGCAAGA
GATATGTGGGATCCAGTTTTCCAAAATCATACATCGCGCGTCCAATCAAA
ACATACAGCGTTAATCACTACGAAGACGATGcgttttaaaaacataaaag
caGgCTGTATGATGGGGTCTGGCACCATTCGAGATGTTTTCGAAACAGAG
AGAGGGTGTGCTGAAGTATGCATGGATGAACCAAGATGTATCACATGGAA
TCAACCTGACCAGAGCTGTATGATTTATGATAAAGTATTTCGAGCCAATC
CAAGAAAGGTTTTGTATTACTATGGTGGCGATTGTATTACCTATGAGGTT
TGGAACCCATGTACGGAGAATATGAATCTTTGTGAGCATGGCAGTATCTG
TTCACCCAACCGTTTGACCAAAACTTACGAATGCATCAATTGTTCTCTGC
CATATACTGGTCAACATTGCAATGAGACATTTTCTGGTCCTGGAGAAGCC
CCACCACCAGCCCCACCACAAGTTATCCACGAAGacATTTTACTTGGCCG
GAATAAGTCATGCCGATCGTTATTTCATCACTTTCAAATCGAACATCTGT
GGAAAGTATACTATATTCATCCATGGAATGACcacagaaaaatcaaagta
CTCTGTAAAAgTCAAGATACAAGACTTACAAGTTTAAACTCTGCAAACCT
TCTCCCCATTCGAGAAATCAAAGGCGAGGACCTACAAGATGGCCTTGATA
TTTCTCAAGTTAGCACTGGCAGTATTAGAGTTCATACCTCTTTTATGAAA
GCTTTggaaagtctgatacagttcgACTATATTCTCCTGCATTGCCGACA
GAAAAATAGCTCTTTGGCTTATGATTTGAATTCGGCACCGTATTTTAAgc
cttttgattattttttgggACTCACTGATGACCGACCCCCAATATACTCT
ATGGCTTTCCGTGCTCATTATGGTGACATGGTCCTGGACCCTATTGACGG
CTTTCTTTCTGACGCCAATGTAAGCGTCGATGAAAGAGCCTTTAAGAACA
TTGTTGTGAATTCAGATGGGAAGAAATTTACAATGTCTGATGAATCAATG
CAATGTTTTGGAGACGATGGCGACTGGAAATGGTTTACAATGGATGTTAG
GTGAATGAAATCATCGCGTTTGCAGTTGTTGGTCTTTATATTATGGACTT
TATTATGGCAAGCATCAGCAGCAAGAGATATGTGGGATCCAGTTTTCCAA
AATCATACATCGCGCGTCCAATCAAAACATACAGCGTTAATCACTACGAA
GACGATGcgttttaaaaacataaaagcaGgCTGTATGATGGGGTCTGGCA
CCATTCGAGATGTTTTCGAAACAGAGAGAGGGTGTGCTGAAGTATGCATG
GATGAACCAAGATGTATCACATGGAATCAACCTGACCAGAGCTGTATGAT
TTATGATAAAGTATTTCGAGCCAATCCAAGAAAGGTTTTGTATTACTATG
GTGGCGATTGTATTACCTATGAGGTTTGGAACCCATGTACGGAGAATATG
AATCTTTGTGAGCATGGCAGTATCTGTTCACCCAACCGTTTGACCAAAAC
TTACGAATGCATCAATTGTTCTCTGCCATATACTGGTCAACATTGCAATG
AGACATTTTCTGGTCCTGGAGAAGCCCCACCACCAGCCCCACCACAAGTT
ATCCACGAAGacATTTTACTTGGCCGGAATAAGTCATGCCGATCGTTATT
TCATCACTTTCAAATCGAACATCTGTGGAAAGTATACTATATTCATCCAT
GGAATGACcacagaaaaatcaaagtaCTCTGTAAAAgTCAAGATACAAGA
CTTACAAGTTTAAACTCTGCAAACCTTCTCCCCATTCGAGAAATCAAAGG
CGAGGACCTACAAGATGGCCTTGATATTTCTCAAGTTAGCACTGGCAGTA
TTAGAGTTCATACCTCTTTTATGAAAGCTTTggaaagtctgatacagttc
gACTATATTCTCCTGCATTGCCGACAGAAAAATAGCTCTTTGGCTTATGA
TTTGAATTCGGCACCGTATTTTAAgccttttgattattttttgggACTCA
CTGATGACCGACCCCCAATATACTCTATGGCTTTCCGTGCTCATTATGGT
GACATGGTCCTGGACCCTATTGACGGCTTTCTTTCTGACGCCAATGTAAG
CGTCGATGAAAGAGCCTTTAAGAACATTGTTGTGAATTCAGATGGGAAGA
AATTTACAATGTCTGATGAATCAATGCAATGTTTTGGAGACGATGGCGAC
TGGAAATGGTTTACAATGGATGTTAGGTGAATGAAATCATCGCGTTTGCA
GTTGTTGGTCTTTATATTATGGACTTTATTATGGCAAGCATCAGCAGCAA
GAGATATGTGGGATCCAGTTTTCCAAAATCATACATCGCGCGTCCAATCA
AAACATACAGCGTTAATCACTACGAAGACGATGcgttttaaaaacataaa
agcaGgCTGTATGATGGGGTCTGGCACCATTCGAGATGTTTTCGAAACAG
AGAGAGGGTGTGCTGAAGTATGCATGGATGAACCAAGATGTATCACATGG
AATCAACCTGACCAGAGCTGTATGATTTATGATAAAGTATTTCGAGCCAA
TCCAAGAAAGGTTTTGTATTACTATGGTGGCGATTGTATTACCTATGAGG
TTTGGAACCCATGTACGGAGAATATGAATCTTTGTGAGCATGGCAGTATC
TGTTCACCCAACCGTTTGACCAAAACTTACGAATGCATCAATTGTTCTCT
GCCATATACTGGTCAACATTGCAATGAGACATTTTCTGGTCCTGGAGAAG
CCCCACCACCAGCCCCACCACAAGTTATCCACGAAGacATTTTACTTGGC
CGGAATAAGTCATGCCGATCGTTATTTCATCACTTTCAAATCGAACATCT
GTGGAAAGTATACTATATTCATCCATGGAATGACcacagaaaaatcaaag
taCTCTGTAAAAgTCAAGATACAAGACTTACAAGTTTAAACTCTGCAAAC
CTTCTCCCCATTCGAGAAATCAAAGGCGAGGACCTACAAGATGGCCTTGA
TATTTCTCAAGTTAGCACTGGCAGTATTAGAGTTCATACCTCTTTTATGA
AAGCTTTggaaagtctgatacagttcgACTATATTCTCCTGCATTGCCGA
CAGAAAAATAGCTCTTTGGCTTATGATTTGAATTCGGCACCGTATTTTAA
gccttttgattattttttgggACTCACTGATGACCGACCCCCAATATACT
CTATGGCTTTCCGTGCTCATTATGGTGACATGGTCCTGGACCCTATTGAC
GGCTTTCTTTCTGACGCCAATGTAAGCGTCGATGAAAGAGCCTTTAAGAA
CATTGTTGTGAATTCAGATGGGAAGAAATTTACAATGTCTGATGAATCAA
TGCAATGTTTTGGAGACGATGGCGACTGGAAATGGTTTACAATGGATGTT
AGGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038196XLOC_038196Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060804-proteinTCONS_00060804-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060804-exon-scaffold_349-1491911889:793052..793530TCONS_00060804-exon-scaffold_349-1491911889:793052..793530Clytia hemisphaericaexon
TCONS_00060804-exon-scaffold_349-1510915933:793052..793530TCONS_00060804-exon-scaffold_349-1510915933:793052..793530Clytia hemisphaericaexon
TCONS_00060804-exon-scaffold_349-1575043694:793052..793530TCONS_00060804-exon-scaffold_349-1575043694:793052..793530Clytia hemisphaericaexon
TCONS_00060804-exon-scaffold_349-1491911889:794876..795075TCONS_00060804-exon-scaffold_349-1491911889:794876..795075Clytia hemisphaericaexon
TCONS_00060804-exon-scaffold_349-1510915933:794876..795075TCONS_00060804-exon-scaffold_349-1510915933:794876..795075Clytia hemisphaericaexon
TCONS_00060804-exon-scaffold_349-1575043694:794876..795075TCONS_00060804-exon-scaffold_349-1575043694:794876..795075Clytia hemisphaericaexon
TCONS_00060804-exon-scaffold_349-1491911889:795866..796004TCONS_00060804-exon-scaffold_349-1491911889:795866..796004Clytia hemisphaericaexon
TCONS_00060804-exon-scaffold_349-1510915933:795866..796004TCONS_00060804-exon-scaffold_349-1510915933:795866..796004Clytia hemisphaericaexon
TCONS_00060804-exon-scaffold_349-1575043694:795866..796004TCONS_00060804-exon-scaffold_349-1575043694:795866..796004Clytia hemisphaericaexon
TCONS_00060804-exon-scaffold_349-1491911889:796902..796943TCONS_00060804-exon-scaffold_349-1491911889:796902..796943Clytia hemisphaericaexon
TCONS_00060804-exon-scaffold_349-1510915933:796902..796943TCONS_00060804-exon-scaffold_349-1510915933:796902..796943Clytia hemisphaericaexon
TCONS_00060804-exon-scaffold_349-1575043694:796902..796943TCONS_00060804-exon-scaffold_349-1575043694:796902..796943Clytia hemisphaericaexon
TCONS_00060804-exon-scaffold_349-1491911889:797379..797504TCONS_00060804-exon-scaffold_349-1491911889:797379..797504Clytia hemisphaericaexon
TCONS_00060804-exon-scaffold_349-1510915933:797379..797504TCONS_00060804-exon-scaffold_349-1510915933:797379..797504Clytia hemisphaericaexon
TCONS_00060804-exon-scaffold_349-1575043694:797379..797504TCONS_00060804-exon-scaffold_349-1575043694:797379..797504Clytia hemisphaericaexon
TCONS_00060804-exon-scaffold_349-1491911889:798175..798776TCONS_00060804-exon-scaffold_349-1491911889:798175..798776Clytia hemisphaericaexon
TCONS_00060804-exon-scaffold_349-1510915933:798175..798776TCONS_00060804-exon-scaffold_349-1510915933:798175..798776Clytia hemisphaericaexon
TCONS_00060804-exon-scaffold_349-1575043694:798175..798776TCONS_00060804-exon-scaffold_349-1575043694:798175..798776Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_349supercontigscaffold_349:793052..798776 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.0592253	0.173473	0.13708	0.0992289	0.0928969	0.0433596	0	0	0.0380332	2.27322	1.73384	0.160696	0.109742	0.445942	0.456773	4.59455	2.59139	0.472474	0.598807	0.167624	0.429091	0.110488	0	0	0.0376486	0	0.0290932
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060804 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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