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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061291 ID=TCONS_00061291|Name=TCONS_00061291|organism=Clytia hemisphaerica|type=transcript|length=788bp
GTCAGTTGTTGTCCGTCCAGCTGTCAGTTACCGTCCGTCAAACATCAATA
ATAATCATATCCAGATATCATAACATGTAAACTTATCAAGCATATGATGA
ATGTACGCTATGCATATACAGCACACTCACACCTGCACACACGTATTACG
TGATTAATATATATATTAATACGATATAGTACCAATTACGGATTATCGAT
TAGTACGATATATCGTACTTGATCATCAAGCCGTTGTTCCCTTGTTTCTT
CCATCCACTTGAGTAAGCTGATATTTCTAGTCTTTACCAGCTGTGACTGT
TCCCATGCCATTTCCAGAAGAATCGTGAATTTAGGAAAATCAAATCTTCC
AGTTCTTCGCTCAAACAAAGCAATCAGTGAACAGGTAGCTACAGTTTCAA
AACTTGAAGAATGAGGTACCAAACTGAACCATCATAGTTCCTAGATATAT
CTGTTCTGTTTAACTGTTTTTGACAGCTGTAATACAAGCAGGCAAGTCAC
AACCAATTCTCTAATCAACAAAAAAGTTATGCTGGAgctatagtaggggg
aaatttgttcgtttttttgaggtcgctcgacttttttagtcaaagcactt
gttatatatttttggaaagctaaggggtaggggaatcaaaataacttggg
tgccaattttttttcggacactttggtgcgattttcggacaaatacgacg
gtctcaggcaaaaatcatagggtgaaaaattaatgaaaattttagcttga
gaaaacggagacctgttgtatatttttggaaagctctc Run BLAST on NCBI transcript from alignment at scaffold_355:60501..61383- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061291 ID=TCONS_00061291|Name=TCONS_00061291|organism=Clytia hemisphaerica|type=transcript|length=883bp|location=Sequence derived from alignment at scaffold_355:60501..61383- (Clytia hemisphaerica)
GTCAGTTGTTGTCCGTCCAGCTGTCAGTTACCGTCCGTCAAACATCAATA
ATAATCATATCCAGATATCATAACATGTAAACTTATCAAGCATATGATGA
ATGTACGCTATGCATATACAGCACACTCACACCTGCACACACGTATTACG
TGATTAATATATATATTAATACGATATAGTACCAATTACGGATTATCGAT
TAGTACGATATATCGTACTTGATCATCAAGCCGTTGTTCCCTTGTTTCTT
CCATCCACTTGAGTAAGCTGATATTTCTAGTCTTTACCAGCTGTGACTGT
TCCCATGCCATTTCCAGAAGAATCGTGAATTTAGGAAAATCAAATCTTCC
AGTTCTTCGCTCAAACAAAGCAATCAGTGAACAGGTAGCTACAGTTTCAA
AACTTGAAGAATGAGGTACCAAACTGAACCATCATAGTTCCTAGATATAT
CTGTTCTGTTTAACTGTTTTTGACAGCTGTAATACAAGCAGGCAAGTCAC
AACCAATTCTCTAATCAACAAAAAANTCATAGTTCCTAGATATATCTGTT
CTGTTTAACTTTTTTTAACAGCTGTAATACAAGCAGGCAAGTCACAACCA
ATTCTCTAATCAACAAAAAAGTTATGCTGGAGCTATAGTAGGGGGAAATT
TGTTCGTTTTTTTGAGGTCGCTCGACTTTTTTAGTCAAAGCACTTGTTAT
ATATTTTTGGAAAGCTAAGGGGTAGGGGAATCAAAATAACTTGGGTGCCA
ATTTTTTTTCGGACACTTTGGTGCGATTTTCGGACAAATACGACGGTCTC
AGGCAAAAATCATAGGGTGAAAAATTAATGAAAATTTTAGCTTGAGAAAA
CGGAGACCTGTTGTATATTTTTGGAAAGCTCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061291-exon-scaffold_355-1575043694:60893..61383 | TCONS_00061291-exon-scaffold_355-1575043694:60893..61383 | Clytia hemisphaerica | exon |
| TCONS_00061291-exon-scaffold_355-1575043694:60501..60797 | TCONS_00061291-exon-scaffold_355-1575043694:60501..60797 | Clytia hemisphaerica | exon |
| TCONS_00061291-exon-scaffold_355-1510915933:60893..61383 | TCONS_00061291-exon-scaffold_355-1510915933:60893..61383 | Clytia hemisphaerica | exon |
| TCONS_00061291-exon-scaffold_355-1510915933:60501..60797 | TCONS_00061291-exon-scaffold_355-1510915933:60501..60797 | Clytia hemisphaerica | exon |
| TCONS_00061291-exon-scaffold_355-1491911889:60893..61383 | TCONS_00061291-exon-scaffold_355-1491911889:60893..61383 | Clytia hemisphaerica | exon |
| TCONS_00061291-exon-scaffold_355-1491911889:60501..60797 | TCONS_00061291-exon-scaffold_355-1491911889:60501..60797 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_355 | supercontig | scaffold_355:60501..61383 - |
Blast
The following BLAST results are available for this feature:
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