Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063784 ID=TCONS_00063784|Name=TCONS_00063784|organism=Clytia hemisphaerica|type=transcript|length=1057bpRun BLAST on NCBI transcript from alignment at scaffold_400:69475..70531+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00063784 ID=TCONS_00063784|Name=TCONS_00063784|organism=Clytia hemisphaerica|type=transcript|length=1057bp|location=Sequence derived from alignment at scaffold_400:69475..70531+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2 Blast
BLAST of TCONS_00063784 vs. Swiss-Prot (Human)
Match: ZN700 (Zinc finger protein 700 OS=Homo sapiens GN=ZNF700 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 5.597e-55 Identity = 97/174 (55.75%), Postives = 120/174 (68.97%), Query Frame = 3 Query: 507 RKFSCVYCEKGFRTSSDLKSHTRTHTGEKPYECNVCGKKFSQSNSLRKHQFTHTGERRLKSDLSDNRTFGCAYCEKGFRTSSDLKIHTRTHTGEKPYECSDCEKAFSCSSNLKKHQLTHTGEKPYECSDCEKAFSCSSNLKKHQLTHTGEKPYKCDICDKGFRVSSTLKVHFRK 1028 R + C CEKGF ++ ++H +THTGEKPYECN CGK F NSLR H+ THTGE+ + C C K FR++S L++H RTHTGEKPYEC C KAFSC+SNL+KH THTGEKPYEC C KAF +SNL+ H+ THTGEKPY+C C+K F S+ ++H RK Sbjct: 506 RPYKCSICEKGFYSAKSFQTHEKTHTGEKPYECNQCGKAFRCCNSLRYHERTHTGEK----------PYECKQCGKAFRSASHLRMHERTHTGEKPYECKQCGKAFSCASNLRKHGRTHTGEKPYECKQCGKAFRSASNLQMHERTHTGEKPYECKECEKAFCKFSSFQIHERK 669 HSP 2 Score: 174.096 bits (440), Expect = 2.906e-48 Identity = 93/202 (46.04%), Postives = 119/202 (58.91%), Query Frame = 3 Query: 492 IHLESRKFSCVYCEKGFRTSSDLKSHTRTHTGEKPYECNVCGKKFSQSNSLRKHQFTHTGER-----------RLKSDL-------------SDNRTFGCAYCEKGFRTSSDLKIHTRTHTGEKPYECSDCEKAFSCSSNLKKHQLTHTGEKPYECSDCEKAFSCSSNLKKHQLTHTGEKPYKCDICDKGFRVSSTLKVHFR 1025 IH + + C C K FR++S L+ H THTGEKPYEC CGK F ++ LR H THTGE+ R L S R + C+ CEKGF ++ + H +THTGEKPYEC+ C KAF C ++L+ H+ THTGEKPYEC C KAF +S+L+ H+ THTGEKPY+C C K F +S L+ H R Sbjct: 411 IHTGEKPYECKQCGKAFRSASQLRVHGGTHTGEKPYECKECGKAFRSTSHLRVHGRTHTGEKPYECKECGKAFRYVKHLQIHERTEKHIRMPSGERPYKCSICEKGFYSAKSFQTHEKTHTGEKPYECNQCGKAFRCCNSLRYHERTHTGEKPYECKQCGKAFRSASHLRMHERTHTGEKPYECKQCGKAFSCASNLRKHGR 612 HSP 3 Score: 165.236 bits (417), Expect = 3.547e-45 Identity = 86/178 (48.31%), Postives = 111/178 (62.36%), Query Frame = 3 Query: 492 IHLESRKFSCVYCEKGFRTSSDLKSHTRTHTGEKPYECNVCGKKFSQSNSLRKHQFTHTGERRLKSDLSDNRTFGCAYCEKGFRTSSDLKIHTRTHTGEKPYECSDCEKAFSCSSNLKKHQLTHTGEKPYECSDCEKAFSCSSNLKKHQLTHTGEKPYKCDICDKGFRVSSTLKVHFR 1025 H + + C C K FR++S L+ H RTHTGEKPYEC CGK FS +++LRKH THTGE+ + C C K FR++S+L++H RTHTGEKPYEC +CEKAF S+ + H+ H GEKPYEC C F+ + L+ H TH GEK Y+C C K F S+L +H R Sbjct: 557 THTGEKPYECKQCGKAFRSASHLRMHERTHTGEKPYECKQCGKAFSCASNLRKHGRTHTGEK----------PYECKQCGKAFRSASNLQMHERTHTGEKPYECKECEKAFCKFSSFQIHERKHRGEKPYECKHCGNGFTSAKILQIHARTHIGEKHYECKECGKAFNYFSSLHIHAR 724 HSP 4 Score: 157.918 bits (398), Expect = 1.908e-42 Identity = 81/184 (44.02%), Postives = 114/184 (61.96%), Query Frame = 3 Query: 486 VEIHLESRKFSCVYCEKGFRTSSDLKSHTRTHTGEKPYECNVCGKKFSQSNSLRKHQFTHTGERRLKSDLSDNRTFGCAYCEKGFRTSSDLKIHTRTHTGEKPYECSDCEKAFSCSSNLKKHQLTHTGEKPYECSDCEKAFSCSSNLKKHQLTH------TGEKPYKCDICDKGFRVSSTLKVH 1019 + ++ R + C C KGF ++ ++H +THTGEK Y+C CGK F+ S+S R H+ HTGE+ + C C K FR++S L++H THTGEKPYEC +C KAF +S+L+ H THTGEKPYEC +C KAF +L+ H+ T +GE+PYKC IC+KGF + + + H Sbjct: 353 IRMNSGERPYKCKICGKGFYSAKSFQTHEKTHTGEKRYKCKQCGKAFNLSSSFRYHERIHTGEK----------PYECKQCGKAFRSASQLRVHGGTHTGEKPYECKECGKAFRSTSHLRVHGRTHTGEKPYECKECGKAFRYVKHLQIHERTEKHIRMPSGERPYKCSICEKGFYSAKSFQTH 526 HSP 5 Score: 155.606 bits (392), Expect = 9.646e-42 Identity = 87/205 (42.44%), Postives = 109/205 (53.17%), Query Frame = 3 Query: 495 HLESRKFSCVYCEKGFRTSSDLKSHTRTHTGEKPYECN----------------------------VCGKKFSQSNSLRKHQFTHTGERRLKSDLSDNRTFGCAYCEKGFRTSSDLKIHTRTHTGEKPYECSDCEKAFSCSSNLKKHQLTHTGEKPYECSDCEKAFSCSSNLKKHQLTHTGEKPYKCDICDKGFRVSSTLKVHFR 1025 H+ + + C C K F +S L+ H RTH+G+KPYEC +CGK F + S + H+ THTGE+R K C C K F SS + H R HTGEKPYEC C KAF +S L+ H THTGEKPYEC +C KAF +S+L+ H THTGEKPY+C C K FR L++H R Sbjct: 300 HMGEKPYQCKECGKAFAYTSSLRRHERTHSGKKPYECKQYGEGLSYLISFQTHIRMNSGERPYKCKICGKGFYSAKSFQTHEKTHTGEKRYK----------CKQCGKAFNLSSSFRYHERIHTGEKPYECKQCGKAFRSASQLRVHGGTHTGEKPYECKECGKAFRSTSHLRVHGRTHTGEKPYECKECGKAFRYVKHLQIHER 494 HSP 6 Score: 155.221 bits (391), Expect = 1.694e-41 Identity = 79/164 (48.17%), Postives = 104/164 (63.41%), Query Frame = 3 Query: 534 KGFRTSSDLKSHTRTHTGEKPYECNVCGKKFSQSNSLRKHQFTHTGERRLKSDLSDNRTFGCAYCEKGFRTSSDLKIHTRTHTGEKPYECSDCEKAFSCSSNLKKHQLTHTGEKPYECSDCEKAFSCSSNLKKHQLTHTGEKPYKCDICDKGFRVSSTLKVHFR 1025 K FR +++ R HTGEKPY C VCGK F +S+R+H H+G + T+ C +C K F + S IH RTHTGEKPYEC C K+F+ S+ L+ H+ THTGEKPYECS C+KAF SS+ +H+ +H GEKPY+C C K F +S+L+ H R Sbjct: 173 KAFRYRPSIRTQERDHTGEKPYACKVCGKTFIFHSSIRRHMVMHSG----------DGTYKCKFCGKAFHSFSLYLIHERTHTGEKPYECKQCGKSFTYSATLQIHERTHTGEKPYECSKCDKAFHSSSSYHRHERSHMGEKPYQCKECGKAFAYTSSLRRHER 326 HSP 7 Score: 144.821 bits (364), Expect = 6.308e-38 Identity = 74/176 (42.05%), Postives = 107/176 (60.80%), Query Frame = 3 Query: 492 IHLESRKFSCVYCEKGFRTSSDLKSHTRTHTGEKPYECNVCGKKFSQSNSLRKHQFTHTGERRLKSDLSDNRTFGCAYCEKGFRTSSDLKIHTRTHTGEKPYECSDCEKAFSCSSNLKKHQLTHTGEKPYECSDCEKAFSCSSNLKKHQLTHTGEKPYKCDICDKGFRVSSTLKVH 1019 +H + C +C K F + S H RTHTGEKPYEC CGK F+ S +L+ H+ THTGE+ + C+ C+K F +SS H R+H GEKPY+C +C KAF+ +S+L++H+ TH+G+KPYEC + S + + H ++GE+PYKC IC KGF + + + H Sbjct: 215 MHSGDGTYKCKFCGKAFHSFSLYLIHERTHTGEKPYECKQCGKSFTYSATLQIHERTHTGEK----------PYECSKCDKAFHSSSSYHRHERSHMGEKPYQCKECGKAFAYTSSLRRHERTHSGKKPYECKQYGEGLSYLISFQTHIRMNSGERPYKCKICGKGFYSAKSFQTH 380 HSP 8 Score: 141.354 bits (355), Expect = 1.124e-36 Identity = 71/176 (40.34%), Postives = 104/176 (59.09%), Query Frame = 3 Query: 492 IHLESRKFSCVYCEKGFRTSSDLKSHTRTHTGEKPYECNVCGKKFSQSNSLRKHQFTHTGERRLKSDLSDNRTFGCAYCEKGFRTSSDLKIHTRTHTGEKPYECSDCEKAFSCSSNLKKHQLTHTGEKPYECSDCEKAFSCSSNLKKHQLTHTGEKPYKCDICDKGFRVSSTLKVH 1019 H + + C C+K F +SS H R+H GEKPY+C CGK F+ ++SLR+H+ TH+G++ + C +G + H R ++GE+PY+C C K F + + + H+ THTGEK Y+C C KAF+ SS+ + H+ HTGEKPY+C C K FR +S L+VH Sbjct: 271 THTGEKPYECSKCDKAFHSSSSYHRHERSHMGEKPYQCKECGKAFAYTSSLRRHERTHSGKK----------PYECKQYGEGLSYLISFQTHIRMNSGERPYKCKICGKGFYSAKSFQTHEKTHTGEKRYKCKQCGKAFNLSSSFRYHERIHTGEKPYECKQCGKAFRSASQLRVH 436 HSP 9 Score: 140.198 bits (352), Expect = 2.977e-36 Identity = 76/186 (40.86%), Postives = 109/186 (58.60%), Query Frame = 3 Query: 468 QEADHKVEIHLESRKFSCVYCEKGFRTSSDLKSHTRTHTGEKPYECNVCGKKFSQSNSLRKHQFTHTGERRLKSDLSDNRTFGCAYCEKGFRTSSDLKIHTRTHTGEKPYECSDCEKAFSCSSNLKKHQLTHTGEKPYECSDCEKAFSCSSNLKKHQLTHTGEKPYKCDICDKGFRVSSTLKVHFR 1025 QE DH E + ++C C K F S ++ H H+G+ Y+C CGK F + H+ THTGE + + C C K F S+ L+IH RTHTGEKPYECS C+KAF SS+ +H+ +H GEKPY+C +C KAF+ +S+L++H+ TH+G+KPY+C +G + + H R Sbjct: 184 QERDHTGE-----KPYACKVCGKTFIFHSSIRRHMVMHSGDGTYKCKFCGKAFHSFSLYLIHERTHTGE----------KPYECKQCGKSFTYSATLQIHERTHTGEKPYECSKCDKAFHSSSSYHRHERSHMGEKPYQCKECGKAFAYTSSLRRHERTHSGKKPYECKQYGEGLSYLISFQTHIR 354 HSP 10 Score: 126.331 bits (316), Expect = 1.614e-31 Identity = 68/158 (43.04%), Postives = 90/158 (56.96%), Query Frame = 3 Query: 492 IHLESRKFSCVYCEKGFRTSSDLKSHTRTHTGEKPYECNVCGKKFSQSNSLRKHQFTHTGERRLKSDLSD------------------NRTFGCAYCEKGFRTSSDLKIHTRTHTGEKPYECSDCEKAFSCSSNLKKHQLTHTGEKPYECSDCEKAFS 911 H + + C C K F +S+L+ H RTHTGEKPYEC CGK F +++L+ H+ THTGE+ + + + + C +C GF ++ L+IH RTH GEK YEC +C KAF+ S+L H TH GEKPYEC DC KAFS Sbjct: 585 THTGEKPYECKQCGKAFSCASNLRKHGRTHTGEKPYECKQCGKAFRSASNLQMHERTHTGEKPYECKECEKAFCKFSSFQIHERKHRGEKPYECKHCGNGFTSAKILQIHARTHIGEKHYECKECGKAFNYFSSLHIHARTHMGEKPYECKDCGKAFS 742 The following BLAST results are available for this feature:
BLAST of TCONS_00063784 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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