TCONS_00064139 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064139
Unique NameTCONS_00064139
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3525

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064139 ID=TCONS_00064139|Name=TCONS_00064139|organism=Clytia hemisphaerica|type=transcript|length=3525bp
tagaaatgttacGCATTATAAAATGTTTACCCATATTCATAAAATATTAT
AACATTTTTAGAATCAGTTATTTTTATGGATATCGCTAAAAATTATCATT
GAGTCTTGAATTGCAATGATTTTTCATTACAGTAAAAATGCAAATGTTTA
TTATTTGTCGTTATTCGTCATCCTTGTCAATTATAATGTCCAATCTCAAC
AATTGCAGAATAAGTATACAGACAAAAGTTGCTCCACAAAAGACAAATCA
AAGAATCGCGTACATAGTCTTATgattgtcaaaaatattcattcaaaacA
TGGAGAgatctcaacatttaacgaatGTGCAAGTTTATGTTATAATGCAG
GCTCAAGTACATGCCCTTATTTCGGATATCAACTGGGGAGTAAATCTTGT
CTCTTCTTCAAAGAGAatcttcaaaatgaaacaatatcACGTTTGCTATC
AGAGAGCTGGAGATATGGGCGAGTGTTGGCGAATAAAGCGaCGAGAGAGT
ATTTTCCATGGGACTCTTGTACAGAACCATTTTGTCAGAATACTTGTTTG
AAAGCTGTTCAAGAGCTTTGTTCTAGCAGCGGTGAATGGGATGGTGCCAA
TTGTGACTTATACACAGGTATCGTTTCAAGTTGCGAAGAAGTGTTAACAA
AAACTTACACCTTGATTACTGGAGAAACCATTAACGCTACACATGGGCCA
ACGTTTAAATATAATCTCCTATTTCCTAGTGAAACAGCACCTGTCAAGCT
GACTTGCCCCTTACCTAAAGGTGTTCTTACACGAATTGAAGCTGCGAGCT
CatacaatttatgtttggagCCCAGAACGAAAGATTGTTCTGGAGTCGAA
TGGACTGAACTTAGATATTATTCGAAAGATACTCATTGCCAAGATGCTAG
TTCATTGTTTATCTTCAATCCAGATAAAGGAATCTTATGGCATGCATGCT
CaggaaaacagGTATGCTATTCATCTATCAAAACATATGAAAGGTTGAGG
CTGAGAAATGAAGGCGATTGCAATATAAATCCACGTTACGTTGACAGTGC
AAGTGGCTTCTTATTTCGAACTTATTtTAACGGTATACAAAGTGGAAAAA
ATATCATGCGCTCTTCACACAATAGTCCTCGAAATGATCGTGAAGTGTTT
TTgggtaaagaaaatgaaaatcattgGAGCTGGGAATACATGGTCAATAC
ACAGTATTTTTTTACAGGGATGCaGCGTGGCCCAGTAAAAACCTTATGGT
GGGAATCGTATTTTGGACATACCAATGATGAAGATTCGGCAGATTACGTG
GGCTATATGGATATGCTTGCTGGTATGCAAGATATCAAGGATTGGTATTC
TCTCAAACAAAAAGCTATTTTTGTTGCTCCACAAACAGGCGTTTACAgCT
TCTTTTCATGCCCGGAcgattttgttaaattttacaTTTCAACTGATGCA
ACTCCTGATAATAAAGAAAATGTTCTGGACGCAAACTTATGTTTCCTTCC
TGATCATCGCACCTCCACACCAGTCACGCTTCAAGCCAATAACAAATATT
ACGTCGAAGTACTTTTCGTAGAAGGAATTGGGAGTGACTTTTTTTATATT
GGTATGACTTTGCCAGATTTGACAGAAGTTGAAGTGATCACATCAAAATA
TTTGGAGCCTTACGAATAATTGACAATTATAGACAATTATCGTATCCGTA
AAATGTAAAATGGCTTCCTGAGCGGATAATTCACCGACTGGACTTTTTTC
CGACCTATTGGTCATTTCCGAAACAGTCGTTTCCCCGACAGACATAACCC
CACCAGACATGACATTTCCTCGATTGTTTCACCATGTAAAAACCAATAAT
CCTTAAAAATGCAAAATCGATAGACTTAGATTTTAATTCCGGGAAAAGTC
GGGTAAAATTCTGGTCGGGTAGTTGTTCATTCAGAGAAGCGTCTAGTCGG
Gggtacccagctgacacacgacattgtttcaacgttcatctaacgttata
tggacgttatgaacgttagatagaCATTGAAAACAatgttatgtgccagc
tgggtaatgACAGTCTGCGAAACGTCTTTCAATTATCGGTCGGAAAAGGT
CCGTCTTAGAAAAATTCGTCAGGGAAAAGTCTGGTAACCTAAGAGTTAGC
GTATGGAGAAAAAAGGTTACAATAAATTGTTTTACACAATCGCGTAGTAA
GAATCGGATAATTTAACCCACATGGATATGACAAATTCGAAAGACGTTGA
AATTATCACATCAAAATATTGGGAGCCTTACAAATGAGTTGTAACAAATT
CAAAAAGCGTTTGAATGTCCCTAACATTTGAAGCTATACAAATGATTGAA
AACATTAGATTTTTTAACGGCAGCGAACTCTTCCAAGTTGTGTTAAAGCC
ATAACATTGGTCACCACTACACTACTTATATAGAATAACTATGCTTATAC
ACTGAATGCACACCTGGAGAGCTACCCACAGCAGTGAACAACCAAACAGA
GTGGAATAGATGAGTAAAGATTCTCTGAACTCCGATTTCATTGAAGATTG
CCATCCTGGATGCCATGAAACTTTAAGTATGAAATTAACTTgaatcgttt
tctttactcaaactagaaTAAAACATCTTATGCACGCACAACATGGTGGA
GGCTCTATCAGAGTGTTTGGTAAAAACTGATCGGAGATTctccagccggc
acacaacgttatttcaacgttcatttaacgttatatggacgttgtgaacg
ttagataaacgttgaatcaacgttgtgtgtcagctgatTTAATGTCATAT
ATACATTTTCCTGAGTGTCAGAATATTTGTAAAGAACGTTAACTTTATTA
TGTATGCGATTTATGACttttaatttagaaattttttatacCAGCTCGGA
GTAGGGGCAGACACGGTTCCCCGGAGGGGgtgggtactaggtttgcaagg
tggagattatgtcaaaaatcgacccttagccCATTCTGCCTAGGCTAAGT
ACCCCCGACCCCCGGGATATAGTCAGATATACTTaaaagttggctagttt
ttgCTCCAATCAGCTTAACAAAAAattcttaaacttttttttctataaat
gcCACAGTGGTCAGCGACCCCTTGTTGAAACGAGTAAAGAAAAAGCTTTC
CAAACAACCAAGTTTGATAGggggtttgaaagtttgaaaattttcctaaa
GTGCCTAGATGTAGATCTGGAAAGGGAGCCAAAATTATATCGTATATCAA
CATCATCCCCTTtaaaaggtatttttttttaattttgaaaatttggattt
catgcCAATAACACGTAACGGTTCCGTTTCGATCCGAAAAGAAATGAAGT
CATTCTATTGGCTAGAAGTGATGTAAAACGTAAAACGTAAAATTGTACCA
AtaaaatggcttcattttgtttcggagcgaaacggaaccgtagtGTGTGA
ATGTGGTCTTGATATTATATTTCCATTTGTTTTTGGGAATAAAAGAGATa
ccagtttttctttgaaatgtaCAGC
Run BLAST on NCBI

protein sequence of TCONS_00064139-protein

>TCONS_00064139-protein ID=TCONS_00064139-protein|Name=TCONS_00064139-protein|organism=Clytia hemisphaerica|type=polypeptide|length=517bp
MIFHYSKNANVYYLSLFVILVNYNVQSQQLQNKYTDKSCSTKDKSKNRVH
SLMIVKNIHSKHGEISTFNECASLCYNAGSSTCPYFGYQLGSKSCLFFKE
NLQNETISRLLSESWRYGRVLANKATREYFPWDSCTEPFCQNTCLKAVQE
LCSSSGEWDGANCDLYTGIVSSCEEVLTKTYTLITGETINATHGPTFKYN
LLFPSETAPVKLTCPLPKGVLTRIEAASSYNLCLEPRTKDCSGVEWTELR
YYSKDTHCQDASSLFIFNPDKGILWHACSGKQVCYSSIKTYERLRLRNEG
DCNINPRYVDSASGFLFRTYFNGIQSGKNIMRSSHNSPRNDREVFLGKEN
ENHWSWEYMVNTQYFFTGMQRGPVKTLWWESYFGHTNDEDSADYVGYMDM
LAGMQDIKDWYSLKQKAIFVAPQTGVYSFFSCPDDFVKFYISTDATPDNK
ENVLDANLCFLPDHRTSTPVTLQANNKYYVEVLFVEGIGSDFFYIGMTLP
DLTEVEVITSKYLEPYE
Run BLAST on NCBI

transcript from alignment at scaffold_409:60827..72255-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064139 ID=TCONS_00064139|Name=TCONS_00064139|organism=Clytia hemisphaerica|type=transcript|length=11429bp|location=Sequence derived from alignment at scaffold_409:60827..72255- (Clytia hemisphaerica)
TAGAAATGTTACGCATTATAAAATGTTTACCCATATTCATAAAATATTAT
AACATTTTTAGAATCAGTTATTTTTATGGATATCGCTAAAAATTATCATT
GAGTCTTGAATTGCAATGATTTTTCATTACAGTAAAAATGCAAATGTTTA
TTATTTGTAAGTATATATTATTTTATAACCTTCTTTGAAACTTCATACCA
TTCTTCATGACATGTAAATTTGAACGTGGATAATCCAGACCAGCAAAACC
CACCGGGTTGTCAAAATCAACTTGTTTTTTCATCTTCACTGCGTTATGAA
TTTAGTAATATAGCTTCCATAACTCGAACACGCACGATTAATGCAAATTT
GTTCGAATTAAGGAAATTTTGTTTTATGGAGAATGTTTTATAAGGCATTG
GGACTAAAAAACTTGTTCGAATTAAGGAGATATTTAAGTTGGGGAGGTTC
GAGTTAAAGAGACTCTAGTGTATTCAAAGTTTTATACCAATGGGCACCAT
TTTTGTCAGTCCGGAAGCAAGATCAATACAAAATGTTTAGAAAAATTAAA
AAATGCATTCGATTTGTCATCACAAACCTGCAGCCTGTAACCTTTGACCT
GTTCTAGAGTTTTTTTGCTTATCTTATCACTTTTAGGTCGTTATTCGTCA
TCCTTGTCAATTATAATGTCCAATCTCAACAATTGCAGAATAAGTATACA
GACAAAAGTTGCTCCACAAAAGACAAATCAAAGAATCGCGTACATAGTCT
TATGATTGTCAAAAATATTCATTCAAAACATGGAGAGATCTCAACATTTA
ACGAATGTGCAAGTTTATGTTATAATGCAGGCTCAAGTACATGCCCTTAT
TTCGGATATCAACTGGGGAGTAAATCTTGTCTCTTCTTCAAAGAGAATCT
TCAAAATGAAACAATATCACGTTTGCTATCAGAGAGCTGGAGATATGGGC
GAGTGTTGGCGAATAAAGCGGTAAGCCGAGGTTCCTTCAATTTATTAGTA
GAATAAATCCCTTGAAAGCTTTATAAACCCGATTTTTGGGAAAAGATATA
AGTGAGTTATGTACTGTTCCCTTTTTCCCCTGATAAAATAAAGTCCCTTG
GTGAAAAGACCCGCTCTCATTATGCCATTGAGTTTCACAACTTGCTTCTA
GNCAGTAGAATAAATCTCGTGAAAGCTTTATAAACCCGATTTTCGGGAAA
ATATATTAAAGAGTTACGTACTCTTCCCTTTTTTCCCCCGATAAAATAAA
GTCCCTTGGTGAAAAGACCCGCTCTCATTGAGTTTCACAACTTACTTCTA
GCATTTAAAGGTTTTGTTTTAAGTAAGAGTAATATCGTTTACTTACTCAT
CATCAATTTTAATTCGCTTTTTTACGTTGAATTGACACGGGTGTGGAGCA
AGATTGGTCAGAAAGATGAAAAGAAAAACAATTTTTGCTTATATCAGCAT
AATAGGCAGACACTGTCCTAACATGAAATATGTGTCTGATATGAAACGGG
AATAACCCCTTTAAGGTCAAAAATGTGAATAAGCGTACTAATTTATGCTT
AGCTTTGTAGTTTATATATATGTGAAGAAATAAGAATTTCTGTCCAACTA
TATTCACTTAGGAGATTTGGGTGGCAGAGCAGCATATGCATTTCGTCCTT
ATTAGGACGATTATCTATTTAACATATTTCATTATTTTTAGACGAGAGAG
TATTTTCCATGGGACTCTTGTACAGAACCATTTTGTCAGAATACTTGTTT
GAAAGCTGTTCAAGAGCTTTGTTCTAGCAGCGGTGAATGGGATGGTGCCA
ATTGTGACTTATACACAGGTAAAATTTAACTGAACATACCAGCACAACGC
GAAAGTGACTAGATTCTAATCGTTATATTTCTGTGTGCTCAAAAGCTCAT
TTAATATTAATCCAAATATTTTGATCAACCTGCTGCAAGCAAATTTTCTT
ACCTTTAGAATGCATACGTGCCATGCGCGGGGTATCAGAATCTGCCTTTT
GTCCTTTTAGCCCTCAGTGTCTTCTTATTTTATACACGTTTTTTATAAGA
GCAAACTATATATGAGCGTATTTGGCTTCGATTGCCAAAATATTAAGAAC
AAGTTAAGAACATTCTAAGGCTTTATGAAATGTTAAAAAAATAGCCTGGT
GGTAGGTGCCAGTGTCTCCAGCGGCAAATTTTTTTTTGGAGGGCGTCGAA
ACACAAAGAGCACAAAAAGACGCCTCTGAATGCTAATTTCGGCGCTCCCT
TTCCTTTTTACCTTATTATTGTTAATTTTCGGAAAGAATAGAGAGATAGA
CCCGAAAAGTTTCGTGCTATATATGAAATTTATTTTTAATAGGAAGAGCC
AAAATCAAAATCCTCTAAAATTGCCTCCCCAGTTTCCCCGAATTTTAGTC
GACCCACCACCGCTACTGATATGTTTGTGGACCCAAGTTAGCAACTAAAA
CTTTATCTTCAATAGTCTTTTCAGGAAAATGTCAATTGTCTTGTTATTCA
TTTCTTCAGGTATCGTTTCAAGTTGCGAAGAAGTGTTAACAAAAACTTAC
ACCTTGATTACTGGAGAAACCATTAACGCTACACATGGGCCAACGTTTAA
ATATAATCTCCTATTTCCTAGTGAAACAGCACCTGTCAAGCTGACTTGCC
CCTTACCTAAAGGTAGATTCTAGAGTACATGCTGGTGTTTTATCGAGAAA
CACTTCAAAGAAATAGCTCAGAAAAAAGCTTAACTAAGTATCCAGTAAAG
TCTAGGTCGCTCTGGAGGCCTAAAAACAAGTTTTCTGGTAAAACTACAGA
TCCCAGCCACTTTACGTGACACTTTTAGCTCTTCTCCATTAATCAGGCAA
CTAAAAGCATATATGTAATTTTTGTTTTTCTAAACTCTAGCAATTAGAAT
ACGCAGGGCAGAAAGTCGGCCGTCTAAAGTAGGCCTAAGTAAAACCCTTG
TTACATTTTCATTTCTAGGTGTTCTTACACGAATTGAAGCTGCGAGCTCA
TACAATTTATGTTTGGAGCCCAGAACGAAAGATTGTTCTGGAGTCGAATG
GACTGAACTTAGATATTATTCGAAAGATACTCATTGCCAAGATGCTAGTT
CATTGTTTATCTTCAATCCAGATAAAGGAATCTTATGGCATGCATGCTCA
GGAAAACAGGTTTTTTTTCATTCAATTGGATTGTTTGGACAGTAAATCTT
TATCCCCTTGTGGGAAGAAGTTCTACCACCCGGGGCAGTAAGCCAGGGGT
GCTAAAGGCCGGTGCAAATGCATCCAACATTGAATCCAACATTATTGTTG
CATGAAATGTTGGGTTCATTTGCTCAAGTCATAAAATTGCAACTTTTTAA
TAATAAAAATGTGGAAAATCAAGTTGGATGAAGTTTGATCGCCATCAAAC
ATTTTATCCAACTTTTTTACGAGATTGCCGTCACTTTCATTTTGGTTTCG
ATGTCGGATGCATTTTTTCGAATTTTTCCACGTGACTTTCATCCAACAAT
TCGATCAACAAAGAACTCAAAATGTTGGATCAAATGTTGGATACAATTGA
GCCGGCCTAAGAAGAGACTTTACAGGAACAAAGTTTCGATGGCCAAAAAT
CTTAAGAACATTTTAAGGCTTAGGATAATAAACAAGAAAATCTTAAGAAG
ATCTAAAGGCTTCAAAAATTTTGAATGCTCTAATAAAAAAAATACGTTTC
GATCTTATTATTTCCTATTGTTTAGGTATGCTATTCATCTATCAAAACAT
ATGAAAGGTTGAGGCTGAGAAATGAAGGCGATTGCAATATAAATCCACGT
TACGTTGACAGTGCAAGTGGCTTCTTATTTCGAACTTATTGTAAGTATTC
AAAAAGTAAAATTCCCTTGAGTCTGGAATGACCGCGCGAAGTTGCGGCAG
ATTAATTTTAAATCCGTTTGTTTTGAGTGTGCACAAATTCTTGTTTTACT
TGCCTTTCTTCGACCAATGCTTGAATTTTAACCAATTTATCATATACCGT
TGAAAGAAAATTTAGATTCTTTGAGGAAAATGATTTGAAAATTTTTTGAA
AGATTTCTGTCTCAATAGTGTATTTCCCCCTTAGCCCGTGGTCCACTTTA
AAGTTTCCTTATAGACTGGGTGGTACGATTTTAGATGGTGCAATTGAGTG
GTCCGGTAGTGTACACTTTTTTTTGTGAGAACTATTTTAAGAAAATTTTT
TCTGAGGCCTGAGGCTCGGCTGTTCTTATTTTTTGGCGATTTTGAGCCTC
ATTGTTCTTATAAAAAAAGTATATTGCAATTCTTAATTTTGAGACTACTT
AAGTGGACTATAAAACAGTCTGCCAGGTTTTAGTTGGTTTTGCAAGTTAA
AAATAAGATGAAGATTCTTAAGAAAAATATAAGGTAGTAGATGGATAGAA
ATTCATATAAACTAAAGAACTAAAGAATAAGATATCAGAAATTATTGCCA
AATGTAGACACAAACGAAAATTTCAGTTTGATATCTTTGAACCACCTGAT
GACGTTTGAATATGACGTCAAAAACATTTTTTGAAGACAATATGTTGTAT
TTTGTTTTCTAACGTATCTCATTTCACTGATGATTGGTGCCTGAGCATCA
TGAAACTCTGAGTTTGAGTTAGTGTAAACGCAGTATTCTTTTTCATTTGA
AAAAACTGACGTCACAATGAATTTTCCTAACGACAGGCAACTTTGTGCAG
TGTAGGCCCGTCGTCATGCGAAAAGCACCAATTGCATTACGCAAAAAGCC
GTGTACCCTACCCTGAGCATCAGAGGTTAAGTTTTCAAAGAATATATCAA
CCTCTGAAGACTAATAATAGAAATTTTATCGCACATGTGTCAATCTAATC
ACTGTAGAAAGAATCAAAGATGAAGAGCAAATATTACCTTATTAATGTCT
AGCAGACTGTATCAGTATGCAGTTTACTATTTACAAATTCCCCAGAAACC
TCCAAGTGTAATCGAAGTGAGTTTCTTTCAAAAGAAATCTTTTACATGAT
CCCCAAATGTATAACAGTACTAATTACTAAACTATTAATTATGGAAATAT
CACTTTTAATTGAATCGAAATAATAGACGGACTTTATGTTATGATTCTCT
ATCACTGACTCTTTTTAAAAAGCATTGATGATATTTTTTGTTGTGTTTTC
AACGACGGGAATAAAAATATCGACTTTGAACTTCATCCAAGATCTTAGAT
GGTCGTCATGGTTACTTTTGTCTTCGTTAATATATTATTTTGACCTGTGC
TTTTCACGGTACGTGTAACCCACTTCGAAAAAGTAAACGGTTAACAATTT
ATCCAATAGACTAAAGAACTATTTTTTTCTTCTCTTTAGTTAACGGTATA
CAAAGTGGAAAAAATATCATGCGCTCTTCACACAATAGTCCTCGAAATGA
TCGTGAAGTGTTTTTGGGTAAAGAAAATGAAAATCATTGGAGCTGGGAAT
ACATGGTCAATACACAGTATTTTTTTACAGGGATGCGTAAGTATATACCG
ATTCTGTGTGACGTCATTTTCACCCACCATCAGCCATCTATTTAGAAATG
GAAGATAAAATATGTCCATGATGATTTAGAAACACCTTACTTAGCTTTGA
GGCTTTTAGTGTTCCCATTTGGACCTGCGCATAGTTTCCTATTTTCTTTT
TAATTCGTGAGTAAAAATTAGTTGGGAACAGACAGCTTGCTTCAGATTAG
TTTTGACGATAGTGACTAACTGAATTATGCCGAATCAGTCTAAATACGTG
TATAATTGCGTGTATAATTTTATGAAATAGGAAGATCTTTGAGAGTTAAA
TCACTTGTTAAAAAAAGTGTGCGAGATGAACTCGTTTGTCAATTTACTCA
CTCTGATGAAAGTTACCATCAAGGATTAAAAAGTTGATACATAATACAGG
AATATGGTTGTTATTTTCCTGTTGATTTCCTTTGTCTCTTCATAATTTTC
ATGGCAATCTTTTCTATCTCCGTGATTTTATTGTATTGTGATAGACTTCT
ACCGGGTGTCCCAGAAAAAGTCCCCCTCTTTGAAGTGAATTTTCTCCAGT
TCTATCAATTATTAAAGCATCAATCATTTTGCATGGGAAATAAAAAGGAT
AAACTTGAATTTTGAGGAATTATTTGACAAATTTGGTCTACTACATCAAA
AGTTACGATCTAAATGCTAAATCCACTGAAGGATTAATGTAACTTTTTCA
TGAAAGGATGAATAATAGCTCTAACTATTAATATAATTTTTGGATGAAAA
GAAATGGTTGCTTGTTAATTTTTTTCTTTTCAGATAAATATTGTATTTCC
CAAAGCAACACAGGAGAAAAATCGTTGAATCTTTTTGTATTTCTCACGCA
TTTTCTAATCCACTAATACATGGTCGAAGGCATGTATGAGAGAACAAAAG
AACGAGGATAGGTGGATCAGGAAATACAAAAGATTTGCTGTGGGAGATGA
AATTATTTTTTACAAAAGAAAACATAAATGTGTAACCATCTTTTTTTTCC
ACAACTTATATGAATAGTTTTGGGCTATTCAGCGTTTTATTATACGTTCT
GTTAGTCCTGTTAGCTTAAGCCGCCAGTGGAAAAACACCCTTGAGGGTTG
AGATTAGCTGCAAGATTTCTAATTGAAGCATTCAATTGATCAAAAGTCTG
GGGTTGCAAAATTTTGGGGTTCCTCCAGCTTCTGCTGTTTCATGTAACCC
CACAAAAAGAAATCACATCCAGTGAGATCAGGGGGTCACTCAACATCTCC
TCATAGGCTATGTTATGTTATATGTTAACCACTTTGTCACCCCCGGAATT
TTACATTGTGTAAGAAATTTCCTTTCAGAACAATCTACTTTACATTCTGT
TGAATATTTTAATCATTATTTCTTAGTCGAAGTATATATTTTTGAAATCG
TCAAGTTTTAAGCTTTCCAAGATGTAAATGTAACGTTTATACGACCTATT
TATAAAAAGTTGAATTGTTTCTTCTTCATTTTTCTTCCTATTCTTTTCAA
ATTTCACGAAAAAAACTGACAGTAAATTACTAAGCTCCTTCCTACTTTTC
CAACGATACCAAATTTTTTAAGATTTCTCAGGTGAGTTAAGGCAAGTTCT
AAACATATTTTGCGTCACGCGCACCGCTTTCCGTTGTTCATTAACTTTCA
TATATAGCTCAAAAGAAACGTATCAGGGAGAGGATTTCGGAAAGTGTTGG
GCCGAAAATTTAAATCAAGCCAATCTCAAGATATCGGCCAAAAACTGATT
TTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTTTTTTTGATGACGTCATCATTATTTGACGTATTTTAATTTTT
ACCGACAGTAAATGACGTCATCTAAAAATTTTGAAAATTTCTCAACAAAT
ATTTTAGAATCATTAATCTAAAGTCCCACTAAGGGTCGGAAAAATCAGAA
AATCAAATTTGAGTCACACTAAGGGTCAGAGAAATAAAAAAACTTTTTAC
CCCCGGAAAGAACGAAATTTAGTCAAAATTGGTCGTAAAATTCACAAATG
TTTCCTTTTTTTCCCCCTTTTTAGTCCCGGTAAGGGTTTGGACCCTTATT
TAAAGTCGGGTGGCACTCCCCCCCCCCGTCAGCTCGCAACCCTAGTACAG
GGGGTACTCCAAGCCAGGGAGAACTAAGAGCTCGGAGCCTTATAAAAAAA
CGTGTAACCACTTAAGTTTCAATTACTTTTTGGCTTAACAAACACTTTTC
TATTTGTAGTCGTGTTCTGACAAATGCCTTTTCTCAGGACACCCTGTACA
TAAAGCAAAGCATGTATTTAAGTCTTACCCTAATAAAGACACTGAGAAAA
AAAATGCCATTTTTTTACAATTTTCAGAGCGTGGCCCAGTAAAAACCTTA
TGGTGGGAATCGTATTTTGGACATACCAATGATGAAGATTCGGCAGATTA
CGTGGGCTATATGGATATGCTTGCTGGTATGCAAGATATCAAGGATTGGT
ATTCTCTCAAACAAAAAGCTATTTTTGTTGCTCCACAAACAGGCGTTTAC
AGGTATCCCAGCTGGCACAAAACGTTGTTTCAACGTTCATTTAACGTTAT
ATGGACGTTATGAACATTAGATAAACGTTGGAACAACGTTGTGTGCCAGC
TGGGGTTAAAAACTATTCACTTTAACACTATTCATTTTTACACATTAGGT
TTTTTTTAGGAGTGGTTAAGAACTAGGGGGCGGCTTCCTGTACTACCCTT
ACTCTTATCTGTGAGGGGGTGACTAGCCAAGTGCACTTGTCCAGCTCTAA
GTTTCAGAAGTTTTATTTGTACCATTAGTAGCGGAATACAAAAAAGATTT
ACACAAGATTCTTTTTCAATATCTATTGATCCCTTTTTCTCAATATTTTG
CTTTTAGCTTCTTTTCATGCCCGGACGATTTTGTTAAATTTTACATTTCA
ACTGATGCAACTCCTGATAATAAAGAAAATGTTCTGGACGCAAACTTATG
TTTCCTTCCGTAAGTTATACATCAAGCGATCTTTGGATGACTTGGATAAA
AGTTAGTTAGTTAAAAGTTAGTTGATGATTTAGCAGACTACTCGAATTTT
TGATTCAACCTTCTCTTAAATAATTAAATCTTTCAAAATATTTTGAAAAA
AAAGATGAAAAAATGTAGAAGAAAAAGAGGAAATAAAAGAAAAATTTCAA
ATGGCTAAAAATCTTAGAATTTACATTTTCACGAGTTCCGAGTATCTATT
CAAGTTGCTCGTACAATTCTTTGCTTAATTGTTACGTCTCAAACTTTTAC
CCGTTTTCGGCCAGTAGCCTTTTGAAGATAAGATAAAGCCTTAAAATTAG
TAAGCTCAAAATTATCTATCTTTCAACGAATTATCACTTTTTGGTCGAGG
TGTAATGACGTTCAGAGGTTTAGCTCAAAAAATTCGTTGGCAAGATAATT
TAGAGCTTACAAATTTTAGGGCTTTATCTTTTCTTTAAAGTGGGTAAAAC
TTTAGGCTGTAGCATTTAAACAAAGAATTTTAAAAAGCTTAAAAAATAGC
CAATCTTTATTCAAATTCTACCATATCTACTTTTTAGTGATCATCGCACC
TCCACACCAGTCACGCTTCAAGCCAATAACAAATATTACGTCGAAGTACT
TTTCGTAGAAGGAATTGGGAGTGACTTTTTTTATATTGGTATGACTTTGC
CAGATTTGACAGAAGTTGAAGTGATCACATCAAAATATTTGGAGCCTTAC
GAATAATTGACAATTATAGACAATTATCGTATCCGTAAAATGTAAAATGG
CTTCCTGAGCGGATAATTCACCGACTGGACTTTTTTCCGACCTATTGGTC
ATTTCCGAAACAGTCGTTTCCCCGACAGACATAACCCCACCAGACATGAC
ATTTCCTCGATTGTTTCACCATGTAAAAACCAATAATCCTTAAAAATGCA
AAATCGATAGACTTAGATTTTAATTCCGGGAAAAGTCGGGTAAAATTCTG
GTCGGGTAGTTGTTCATTCAGAGAAGCGTCTAGTCGGGGGTACCCAGCTG
ACACACGACATTGTTTCAACGTTCATCTAACGTTATATGGACGTTATGAA
CGTTAGATAGACATTGAAAACAATGTTATGTGCCAGCTGGGTAATGACAG
TCTGCGAAACGTCTTTCAATTATCGGTCGGAAAAGGTCCGTCTTAGAAAA
ATTCGTCAGGGAAAAGTCTGGTAACCTAAGAGTTAGCGTATGGAGAAAAA
AGGTTACAATAAATTGTTTTACACAATCGCGTAGTAAGAATCGGATAATT
TAACCCACATGGATATGACAAATTCGAAAGACGTTGAAATTATCACATCA
AAATATTGGGAGCCTTACAAATGAGTTGTAACAAATTCAAAAAGCGTTTG
AATGTCCCTAACATTTGAAGCTATACAAATGATTGAAAACATTAGATTTT
TTAACGGCAGCGAACTCTTCCAAGTTGTGTTAAAGCCATAACATTGGTCA
TCACTACACTACTTACATAGAATAACTATGCCTATACACTGAATGCNTAA
AGCCATAACATTGGTCACCACTACACTACTTATATAGAATAACTATGCTT
ATACACTGAATGCACACCTGGAGAGCTACCCACAGCAGTGAACAACCAAA
CAGAGTGGAATAGATGAGTAAAGATTCTCTGAACTCCGATTTCATTGAAG
ATTGCCATCCTGGATGCCATGAAACTTTAAGTATGAAATTAACTTGAATC
GTTTTCTTTACTCAAACTAGAATAAAACATCTTATGCACGCACAACATGG
TGGAGGCTCTATCAGAGTGTTTGGTAAAAACTGATCGGAGATTCTCCAGC
CGGCACACAACGTTATTTCAACGTTCATTTAACGTTATATGGACGTTGTG
AACGTTAGATAAACGTTGAATCAACGTTGTGTGTCAGCTGATTTAATGTC
ATATATACATTTTCCTGAGTGTCAGAATATTTGTAAAGAACGTTAACTTT
ATTATGTATGCGATTTATGACTTTTAATTTAGAAATTTTTTATACCAGCT
CGGAGTAGGGGCAGACACGGTTCCCCGGAGGGGGTGGGTACTAGGTTTGC
AAGGTGGAGATTATGTCAAAAATCGACCCTTAGCCCATTCTGCCTAGGCT
AAGTACCCCCGACCCCCGGGATATAGTCAGATATACTTAAAAGTTGGCTA
GTTTTTGCTCCAATCAGCTTAACAAAAAATTCTTAAACTTTTTTTTCTAT
AAATGCCACAGTGGTCAGCGACCCCTTGTTGAAACGAGTAAAGAAAAAGC
TTTCCAAACAACCAAGTTTGATAGGGGGTTTGAAAGTTTGAAAATTTTCC
TAAAGTGCCTAGATGTAGATCTGGAAAGGGAGCCAAAATTATATCGTATA
TCAACATCATCCCCTTTAAAAGGTATTTTTTTTTAATTTTGAAAATTTGG
ATTTCATGCCAATAACACGTAACGGTTCCGTTTCGATCCGAAAAGAAATG
AAGTCATTCTATTGGCTAGAAGTGATGTAAAACGTAAAACGTAAAATTGT
ACCAATAAAATGGCTTCATTTTGTTTCGGAGCGAAACGGAACCGTAGTGT
GTGAATGTGGTCTTGATATTATATTTCCATTTGTTTTTGGGAATAAAAGA
GATACCAGTTTTTCTTTGAAATGTACAGC

Coding sequence (CDS) from alignment at scaffold_409:60827..72255-

>TCONS_00064139 ID=TCONS_00064139|Name=TCONS_00064139|organism=Clytia hemisphaerica|type=CDS|length=1554bp|location=Sequence derived from alignment at scaffold_409:60827..72255- (Clytia hemisphaerica)
ATGATTTTTCATTACAGTAAAAATGCAAATGTTTATTATTTGTCGTTATT
CGTCATCCTTGTCAATTATAATGTCCAATCTCAACAATTGCAGAATAAGT
ATACAGACAAAAGTTGCTCCACAAAAGACAAATCAAAGAATCGCGTACAT
AGTCTTATGATTGTCAAAAATATTCATTCAAAACATGGAGAGATCTCAAC
ATTTAACGAATGTGCAAGTTTATGTTATAATGCAGGCTCAAGTACATGCC
CTTATTTCGGATATCAACTGGGGAGTAAATCTTGTCTCTTCTTCAAAGAG
AATCTTCAAAATGAAACAATATCACGTTTGCTATCAGAGAGCTGGAGATA
TGGGCGAGTGTTGGCGAATAAAGCGACGAGAGAGTATTTTCCATGGGACT
CTTGTACAGAACCATTTTGTCAGAATACTTGTTTGAAAGCTGTTCAAGAG
CTTTGTTCTAGCAGCGGTGAATGGGATGGTGCCAATTGTGACTTATACAC
AGGTATCGTTTCAAGTTGCGAAGAAGTGTTAACAAAAACTTACACCTTGA
TTACTGGAGAAACCATTAACGCTACACATGGGCCAACGTTTAAATATAAT
CTCCTATTTCCTAGTGAAACAGCACCTGTCAAGCTGACTTGCCCCTTACC
TAAAGGTGTTCTTACACGAATTGAAGCTGCGAGCTCATACAATTTATGTT
TGGAGCCCAGAACGAAAGATTGTTCTGGAGTCGAATGGACTGAACTTAGA
TATTATTCGAAAGATACTCATTGCCAAGATGCTAGTTCATTGTTTATCTT
CAATCCAGATAAAGGAATCTTATGGCATGCATGCTCAGGAAAACAGGTAT
GCTATTCATCTATCAAAACATATGAAAGGTTGAGGCTGAGAAATGAAGGC
GATTGCAATATAAATCCACGTTACGTTGACAGTGCAAGTGGCTTCTTATT
TCGAACTTATTTTAACGGTATACAAAGTGGAAAAAATATCATGCGCTCTT
CACACAATAGTCCTCGAAATGATCGTGAAGTGTTTTTGGGTAAAGAAAAT
GAAAATCATTGGAGCTGGGAATACATGGTCAATACACAGTATTTTTTTAC
AGGGATGCAGCGTGGCCCAGTAAAAACCTTATGGTGGGAATCGTATTTTG
GACATACCAATGATGAAGATTCGGCAGATTACGTGGGCTATATGGATATG
CTTGCTGGTATGCAAGATATCAAGGATTGGTATTCTCTCAAACAAAAAGC
TATTTTTGTTGCTCCACAAACAGGCGTTTACAGCTTCTTTTCATGCCCGG
ACGATTTTGTTAAATTTTACATTTCAACTGATGCAACTCCTGATAATAAA
GAAAATGTTCTGGACGCAAACTTATGTTTCCTTCCTGATCATCGCACCTC
CACACCAGTCACGCTTCAAGCCAATAACAAATATTACGTCGAAGTACTTT
TCGTAGAAGGAATTGGGAGTGACTTTTTTTATATTGGTATGACTTTGCCA
GATTTGACAGAAGTTGAAGTGATCACATCAAAATATTTGGAGCCTTACGA
ATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040213XLOC_040213Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064139-proteinTCONS_00064139-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064139-exon-scaffold_409-1575043694:72100..72255TCONS_00064139-exon-scaffold_409-1575043694:72100..72255Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1575043694:71286..71619TCONS_00064139-exon-scaffold_409-1575043694:71286..71619Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1575043694:70438..70564TCONS_00064139-exon-scaffold_409-1575043694:70438..70564Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1575043694:69594..69746TCONS_00064139-exon-scaffold_409-1575043694:69594..69746Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1575043694:69097..69287TCONS_00064139-exon-scaffold_409-1575043694:69097..69287Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1575043694:68416..68530TCONS_00064139-exon-scaffold_409-1575043694:68416..68530Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1575043694:66770..66916TCONS_00064139-exon-scaffold_409-1575043694:66770..66916Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1575043694:63954..64128TCONS_00064139-exon-scaffold_409-1575043694:63954..64128Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1575043694:63497..63598TCONS_00064139-exon-scaffold_409-1575043694:63497..63598Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1575043694:62014..62918TCONS_00064139-exon-scaffold_409-1575043694:62014..62918Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1575043694:60827..61946TCONS_00064139-exon-scaffold_409-1575043694:60827..61946Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1510915933:72100..72255TCONS_00064139-exon-scaffold_409-1510915933:72100..72255Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1510915933:71286..71619TCONS_00064139-exon-scaffold_409-1510915933:71286..71619Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1510915933:70438..70564TCONS_00064139-exon-scaffold_409-1510915933:70438..70564Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1510915933:69594..69746TCONS_00064139-exon-scaffold_409-1510915933:69594..69746Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1510915933:69097..69287TCONS_00064139-exon-scaffold_409-1510915933:69097..69287Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1510915933:68416..68530TCONS_00064139-exon-scaffold_409-1510915933:68416..68530Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1510915933:66770..66916TCONS_00064139-exon-scaffold_409-1510915933:66770..66916Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1510915933:63954..64128TCONS_00064139-exon-scaffold_409-1510915933:63954..64128Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1510915933:63497..63598TCONS_00064139-exon-scaffold_409-1510915933:63497..63598Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1510915933:62014..62918TCONS_00064139-exon-scaffold_409-1510915933:62014..62918Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1510915933:60827..61946TCONS_00064139-exon-scaffold_409-1510915933:60827..61946Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1491911889:72100..72255TCONS_00064139-exon-scaffold_409-1491911889:72100..72255Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1491911889:71286..71619TCONS_00064139-exon-scaffold_409-1491911889:71286..71619Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1491911889:70438..70564TCONS_00064139-exon-scaffold_409-1491911889:70438..70564Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1491911889:69594..69746TCONS_00064139-exon-scaffold_409-1491911889:69594..69746Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1491911889:69097..69287TCONS_00064139-exon-scaffold_409-1491911889:69097..69287Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1491911889:68416..68530TCONS_00064139-exon-scaffold_409-1491911889:68416..68530Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1491911889:66770..66916TCONS_00064139-exon-scaffold_409-1491911889:66770..66916Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1491911889:63954..64128TCONS_00064139-exon-scaffold_409-1491911889:63954..64128Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1491911889:63497..63598TCONS_00064139-exon-scaffold_409-1491911889:63497..63598Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1491911889:62014..62918TCONS_00064139-exon-scaffold_409-1491911889:62014..62918Clytia hemisphaericaexon
TCONS_00064139-exon-scaffold_409-1491911889:60827..61946TCONS_00064139-exon-scaffold_409-1491911889:60827..61946Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_409supercontigscaffold_409:60827..72255 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0986589	0	0.0373572	0.978244	0.862511	0.64775	1.41597	1.5264	1.92897	5.17894	0.954884	5.3572	5.51699	1.08888	0.97558	1.00167	1.05096	9.88935	7.21125	2.80331	2.73014	0.666645	1.05264	1.06859	1.64754	0.138727	0.0987023	0.0374311	0.0914754
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003609Pan_app
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064139 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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