TCONS_00064842 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064842
Unique NameTCONS_00064842
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2495

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064842 ID=TCONS_00064842|Name=TCONS_00064842|organism=Clytia hemisphaerica|type=transcript|length=2495bp
CTTTGTATAGAGAAATTATTGACTCAATAATACAAAAAATTGAGATATAT
AGTGATTGATTCAGAGAGAAAATGGCGTCTTTGGGACAACTGATTTGTTT
GACCACAATCACGTTACTGGTGTTTATAAAGCTTGCTGAGAGCTCTGGAA
CGATGGAAATTAAACTTCTGAGTTACGCTAATCCAGAACATCGAATGTCG
AACGGTCGTTGCTGTGAAGAAGGTTTAGAGAAAGATTGCAAGAGAAACGA
TAAAAACAGATGTATTGAATGCACAATGGAGTGTGACCCACAATTCAAGT
TCGAAATGAGACGAAACAATGAACGAGTGATGTTTTATAACACAAGCACT
TTGGAGCATAAagataattttgatttcaaagatGTCTTGGAACCTAATAT
TCACAACCCATTTATGTTGAATCTCTCGTCGTTCAAGGGCAATTTCACGT
TTTCGATCAAATCGTTCGATCACGATGATCAAGGAATCGATCCCATCGAT
GAATCGATCTTTCAGTTCAACACAAAAAGCCTGGATACAAAGATACAACC
GAACAATGAAACCGTTTATCTCTGCTCAAGTGGGAAAGTCACCAAAACTA
ATTTCACTATAAGATATACGTGTGATGCAGATTTCTATGGGCCAGCTTGC
GATCGATTCTGCTTGGCACAAAATGACGTGAAGGGGCATTATACATGTGA
TCGTGCATCCGGTGAAATGATATGTTTGGATGGTTGGACGGATGCGAAAA
CTAACTGCACCACTATTACACCAAGTTCAATGATAATTGCCCCATCAACA
TCTACACCCACATTGATGATGAGTTCAACCGTAAACACTGATGCATCTTC
TTCAATGATGGTGTATGGAAGCATCCGTCCAACGAGGTCCGCTAttcaaa
tgatgacgtcatcagttgtTTGTAATAGCACAATAACGAAAGTCAATTTG
GACCTCAAACTTCAAGGAGAGTTAAAATTGAACGAATTCAATGACACGAT
GCAACACATAATCTGTATTGAAGTTAACAAAGCATGCTACAATCTGATTG
GTCAATGCACAAAGACCTCATCACGTGACCAACTCAATTTGAAggatatt
gaaattttggaggAGCGATTTGTTAATCAAACGTTGAGTGATTTCAAGCT
AAGAATTTCTTCAGCTACAGGAAAATGTAACGAGAACTTTGCAAAGTGTG
CCCGAGAATCAATTTACAATTCAAAACAACTACGACACCAGCTTGGTGCT
GAGAAGGTAGAGATATGTACGAACTCAAAAGGTTGTGAACAAAGAGCCAC
TTTATTGAATAATGATCGTAATAAAAAGGAAGAAGGAAAAGATGAAGTGA
TCATTATAGCAGTTTTATGCACCATGTTTGGCGTGGTAGTACTGGCCCTT
GGTTTGCTCTATCTCAGGAAGAAGAGGATGATGAAGATCGGGAATCTGGA
AGATCAGAAATCTTCCAATAACAACAATGATGATGAAAAGACGAACATCG
TTGATGACAAAGAAACATCCTCATGTTGAGCCCGTCAATGTAACATACTT
CAAAAGTACACttgctaaaaatgaaaatgagttaTATTATATTGTGCCTC
TAAGAGGACGAACCAGGGAAACATTATGAAGGCTGTTCGGGGTGATGCAA
GTATGTTTACTTGGCTTACATGAATCAGACCAAGGCTGTCGAGGAGAAAT
GAGAACGCTCTCCTTGTCATGGACTAAAAAATTCTACTAAGTGTCATATA
CAAAGCACTCAAAGAAAGTCTTTGCCCGGAAGTCTGGAAACGAAAAACAG
TTTGCTGTGAATCTTTATATAAATCCGATTAGCGACGGCTTagacaaaaa
tgataaattccTTGTATGAAATGGGGAAGAAATATAATTGAATTTGGTTT
AAAACGAACAATGTTGGAAAATCTATTTGCAGTGCGAGTGGGCCAAGCAA
GCTTCTGTCACAATCAATATAACACATCAACAAGGAAACAAGTAAATCAA
GCGATACTTTGTGTAACAAAGTTATACAATAAAGTAGAAAAAACTGTACA
AAATTGTTTGAACTTGACTTAACTGTTCAAACATTGGGTCTCACAAGTGA
AATAAACGCCGACCGCAAATTTCTTTTCAGTGTTCAGAAATTAGTACTCT
TCTACCAGAGTGTATCGTagctctacggcaatgaatttttgagatttcCT
TAGATGTCAGGTCTGTTTACAGACAAACAAATTAggcttttgtttattta
tttacccattaaaagaaaagattttgCCGAGACTTGTTAGTACGTTTTAG
CTGACCGTTAGACCAATTAACATTAAGGCTTGCAGAGGcggattttttgt
ccaaatatTGACTGAGCAagcaaaataaattaaaaaatgaagatttcaaa
aaacttttaattgtAAATAGTCATGTACATTTTTATTATTGTCATATATT
TAGTTTGAGAGAGATTTAAACCTATGAAGAATATATATTCGTGTG
Run BLAST on NCBI

protein sequence of TCONS_00064842-protein

>TCONS_00064842-protein ID=TCONS_00064842-protein|Name=TCONS_00064842-protein|organism=Clytia hemisphaerica|type=polypeptide|length=485bp
MASLGQLICLTTITLLVFIKLAESSGTMEIKLLSYANPEHRMSNGRCCEE
GLEKDCKRNDKNRCIECTMECDPQFKFEMRRNNERVMFYNTSTLEHKDNF
DFKDVLEPNIHNPFMLNLSSFKGNFTFSIKSFDHDDQGIDPIDESIFQFN
TKSLDTKIQPNNETVYLCSSGKVTKTNFTIRYTCDADFYGPACDRFCLAQ
NDVKGHYTCDRASGEMICLDGWTDAKTNCTTITPSSMIIAPSTSTPTLMM
SSTVNTDASSSMMVYGSIRPTRSAIQMMTSSVVCNSTITKVNLDLKLQGE
LKLNEFNDTMQHIICIEVNKACYNLIGQCTKTSSRDQLNLKDIEILEERF
VNQTLSDFKLRISSATGKCNENFAKCARESIYNSKQLRHQLGAEKVEICT
NSKGCEQRATLLNNDRNKKEEGKDEVIIIAVLCTMFGVVVLALGLLYLRK
KRMMKIGNLEDQKSSNNNNDDEKTNIVDDKETSSC
Run BLAST on NCBI

transcript from alignment at scaffold_425:196740..210735+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064842 ID=TCONS_00064842|Name=TCONS_00064842|organism=Clytia hemisphaerica|type=transcript|length=13996bp|location=Sequence derived from alignment at scaffold_425:196740..210735+ (Clytia hemisphaerica)
CTTTGTATAGAGAAATTATTGACTCAATAATACAAAAAATTGAGATATAT
AGTGATTGATTCAGAGAGAAAATGGCGTCTTTGGGACAACTGATTTGTTT
GACCACAATCACGTTACTGGTGTTTATAAAGGTACGGttcaaatgaagat
tttttttagTCAACATTAACATCAGATCTATATTTCTTCCGAATTTTATT
ACCGAAACTTGCGTATTAGTTTGTATCTTGAGACGTGCGTTCAGCTTGCA
AAAAATTATAAAGCCATCATCGTACAATTTATGTTAATGTATAAAAGTCG
ATCCATTTTATCACAAAATGTAGTTGCGAGTTTACGCGAATTCTAAATTT
TGTCTTACAATTTTGAGAATATGACAATGATGTATTAAGGTTTGAAAATA
ACTGCATAAGTTCACGATTCTTAATTACGATGAAACCAAAAGATTATGGT
ctaattatctgaaaaatattatGTATATCCAATTAACTTAACTTTTTAGT
GAGAATTGCTTTCCCCTCAAAATGATTTTCAGTGGCGAAAAATAAATGAC
TAGATTTgagatttcaaaaagatttcaacatttttatttaGCTTGCTGAG
AGCTCTGGAACGATGGAAATTAAACTTCTGAGTTACGCTAATCCAGAACA
TCGAATGTCGAACGGTCGTTGCTGTGAAGAAGGTTTAGAGAAAGATTGCA
AGAGAAACGATAAAAACAGATGTATTGAATGCACAATGGAGTGTGACCCA
CAATTCAAGTTCGAAATGAGACGAAACAATGAACGAGTGATGTTTTATAA
CACAAGCACTTTGGAGCATAAagataattttgatttcaaagatGTCTTGG
AACCTAATATTCACAACCCATTTATGTTGAATCTCTCGTCGTTCAAGGTA
AATCATTTTGGTGTTGCGTATTTTATGATTACTTTGATGTGGGTTTATTT
CAGTATAATAAGCCTTTTTACACTTAGCGCAGTGAGATCTCTCTAACTGT
ATAAATCCGTTAGCGTTAACGTTAATAGTTCTCTCTCTAACATAGAAATC
CTATCCTTTCAACGTTGTTTTACGACCAAGGcaatataacgttaaatgaa
cgttgaaataacgatGAGAACAATGTCTTCGTCTATTTCTGTCTAGTTTT
GCGAAACACAATCATTGTTAATGCCACACAGGAACTGACATTAGGGATTG
TACTCGTCAATAAACATATATTGTACGGCTAAAACAAAATAGCACAAAAA
CTAAGTTACAACTTTATCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNTGGACTCTCTACATCACTGAGGCATTCA
ACAGTTAATGGTCTTGAATTCAAGACAGCCTCTATTTCAACTAATAATGT
TCGAAAGGATTCATCATTTAACGAAAGACCATGAGTGGTCAATAATGAAT
CTAAGATTGCACGTGTAGAGCGTATTAGTCTTTCCCATACGCCTCCAAAG
TTGCTTGCGTATGGTTGATTGAACTTCCAGCAAACAAAGTCTGCATTTTG
TTCCATCAGATAAATCTTGATTGCTTGATCGTCCACTTCATTGATTGCTT
TGACGAGTTCGTTTCGAGCTCCAACAAAATTTGAGCCGTTGTCACATCTG
ACCAGTCGTACTGGTCCTCTTCTTGCAATGAAACGTCGTAGACACATGAT
GAACGAATCAGTGTCCATAGAATTAACACTCTCTAGATGGCAAGCTCGTG
AATTTAGGCACGTGTAGATAATACCATAACGTTTGAGCTCGCTTCGTCTN
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GACACACAAAAGACACTGCAAACAAAAAGAGACTGGaaacaagggaaaac
actgaccaaacagaaaaacacagaaaaaactgaaaaacctAAAAATGGGA
AAAACCCCAAACATCCTGAGGAGAACCATAAACAGACACTGTGCCTCAGC
CGCTACAATCATTATATCTATAATTATGCTTCTACGGGAGTTTAAAAAGC
AGAAAGTTCTTGATTAATTATTCGCTCAAATAATTAAAACATACATTTTT
AGGGCAATTTCACGTTTTCGATCAAATCGTTCGATCACGATGATCAAGGA
ATCGATCCCATCGATGAATCGATCTTTCAGTTCAACACAAAAAGCCTGGA
TACAAAGATACAACCGAACAATGAAACCGTTTATCTCTGCTCAAGTGGGA
AAGTCACCAAAACTAATTTCACTATAAGGTAAACCCTACGCCTGTATGAC
TACTCTAATTTGACTCGATCATGCGTCAGTTCTTCAGGTCCCCGGAGGGC
AGGAGGTTCATACTAGGATTTGGAAGGATTACAACCCAACCCTCACCATC
CGCACATAACCAGCACGTTTTTCAAACTACAGGGGTTTTTCTGCcatgaa
atctttaaaaaactatatttacttttatttcataAAACTACTTGTCGGTT
CCAGTCTCTTTATTTTACAGTTTACACCAAAAAAATTCTGAATCCTCTTG
TTTTCAGATATACGTGTGATGCAGATTTCTATGGGCCAGCTTGCGATCGA
TTCTGCTTGGCACAAAATGACGTGAAGGGGCATTATACATGTGATCGTGC
ATCCGGTGAAATGATATGTTTGGATGGTTGGACGGATGCGAAAACTAACT
GCACCACTATTAGTGAGTTCAAAGTCCAAATGGATAATTTTCTAAGTGTG
CAACATATATATGCTATAAGTGGATTTAAGGTTTTAGGTCTCTCTTAGca
ttattttaaagaaatgtTTCTTTCATATCTGCAGGATAACTCTCATATTC
GACGTGACATGAAAAAATTATAGTGACTTCTTTTGCCTGAATAACAAGAA
ATCGTAACACGTCAGCCCTTTGGCAGACATTTAAATAAGTATGAATTTGT
TTTCTTATCTCAGCACCAAGTTCAATGATAATTGCCCCATCAACATCTAC
ACCCACATTGATGATGAGTTCAACCGTAAACACTGATGCATCTTCTTCAA
TGATGGTGTATGGAAGCATCCGTCCAACGAGGTCCGCTAttcaaatgatg
acgtcatcagttgtTTGTAATAGCACAATAACGAAAGTCAATTTGGACCT
CAAACTTCAAGGAGAGTTAAAATTGGTAAGTGAAACTAATCATTGATTGA
TATTCATATATTGACCTGCACAGTCAAAACTTCCCAAAAACTTCCCAATA
AACTTGCAAGGACGGCGCACACCCATATCAACCATTTACTTGGGGGAACC
CCAGGGATCTGTACCGATTAGTCCGTTAAGCTATAGATCTTTACCGTAAC
TTTTGGTGCAAATTTTCCATTAAGGAATGTTTATTTATTCTGCAGAACGA
ATTCAATGACACGATGCAACACATAATCTGTATTGAAGTTAACAAAGCAT
GCTACAATCTGATTGGTCAATGCACAAAGACCTCATCACGTGACCAACTC
AATTTGAAggatattgaaattttggaggAGCGATTTGTTAATCAAACGTT
GAGTGATTTCAAGCTAAGAATTTCTTCAGGTAAATACCTAAAATGTAAAG
TATAGATGAAGCCTAGAGTCGAATCTCTTATGTGTAGGATTTTAAGTCTC
NACCTAAAATGTAAAGGATATCCGAAGCCTAGACTCGAATTTCTTGTGTC
GGATTTGAAGCAATTTATTCCCAACATAACTTGCACAACCCACATGGTTT
TTGCACAAACGATGGATTGGAAGTAGCATTTGAtgtcagaatttgaaaat
tggAAAGAGAGAACAAAGAAAGTGCTGGATTCAATCCGCAtacattaaag
gttttatttttacttgcCTGGGAAAGGCCTTTAGCTCTTCCTTTCCTTTA
TTTCGTGAGTAGGTctagattttaattatattagATCAGGAACTCTAAAA
TGTTGACCAATCCTTTTTCAGCTACAGGAAAATGTAACGAGAACTTTGCA
AAGTGTGCCCGAGAATCAATTTACAATTCAAAACAACTACGACACCAGCT
TGGTGCTGAGAAGGTAGAGATATGTACGAACTCAAAAGGTTGTGAACAAA
GAGCCACTTTATTGAATAATGATCGTAATAAAAAGGAAGAAGGAAAAGAT
GAAGTGATCATTATAGCAGTTTTATGCACCATGTTTGGCGTGGTAGTACT
GGCCCTTGGTTTGCTCTATCTCAGGAAGAAGAGGTAAAtttaatttcttc
aaaaaagttATATGGGGGTTTGGATtgcatgaaaattaaaaatattgagA
CATGGGTTTAATGCCAAGAGAGAAAGTTTCATTGGAAATACAGGTTGAAA
GTTTAGCCATTTTAAAAGGAGTACAAGTCTCTATTTAAAAGAGATTTGTC
ACTTCCTTACTCCAAAAAAATCGCATTTCCGATGCCGATTAAAGATTTTA
AGGAAATGAATAATTTCTCTGAATTAGGCTATTCCAGAAGAAACGTgaac
cccctatgttgaggaggtttttttgggaaaagtgATCCCcctgaaatttc
taaaaattttcaggacattttaatgaccagaccccttgattttctatttt
ccagaccaccctgggcCCAACACCTCTTCACCATAGGGgttacagactat
ttctggaatagcccatttgcTGGTTAAGACGGGATTGATGACAAAAGTaa
taatttttccattttcataTTTCCCAGGATGATGAAGATCGGGAATCTGG
AAGATCAGAAATCTTCCAATAACAACAATGATGATGAAAAGACGAACATC
GTTGATGACAAAGAAACATCCTCATGTTGAGCCCGTCAATGTAACATACT
TCAAAAGTACACttgctaaaaatgaaaatgagttaTATTATATTGTGCCT
CTAAGAGGACGAACCAGGGAAACATTATGAAGGCTGTTCGGGGTGATGCA
AGTATGTTTACTTGGCTTACATGAATCAGACCAAGGCTGTCGAGGAGAAA
TGAGAACGCTCTCCTTGTCATGGACTAAAAAATTCTACTAAGTGTCATAT
ACAAAGCACTCAAAGAAAGTCTTTGCCCGGAAGTCTGGAAACGAAAAACA
GTTTGCTGTGAATCTTTATATAAATCCGATTAGCGACGGCTTagacaaaa
atgataaattccTTGTATGAAATGGGGAAGAAATATAATTGAATTTGGTT
TAAAACGAACAATGTTGGAAAATCTATTTGCAGTGCGAGTGGGCCAAGCA
AGCTTCTGTCACAATCAATATAACACATCAACAAGGAAACAAGTAAATCA
AGCGATACTTTGTGTAACAAAGTTATACAATAAAGTAGAAAAAACTGTAC
AAAATTGTTTGAACTTGACTTAACTGTTCAAACATTGGGTCTCACAAGTG
AAATAAACGCCGACCGCAAATTTCTTTTCAGTGTTCAGAAATTAGTACTC
TTCTACCAGAGTGTATCGTagctctacggcaatgaatttttgagatttcC
TTAGATGTCAGGTCTGTTTACAGACAAACAAATTAggcttttgtttattt
atttacccattaaaagaaaagattttgCCGAGACTTGTTAGTACGTTTTA
GCTGACCGTTAGACCAATTAACATTAAGGCTTGCAGAGGcggattttttg
tccaaatatTGACTGAGCAagcaaaataaattaaaaaatgaagatttcaa
aaaacttttaattgtAAATAGTCATGTACATTTTTATTATTGTCATATAT
TTAGTTTGAGAGAGATTTAAACCTATGAAGAATATATATTCGTGTG

Coding sequence (CDS) from alignment at scaffold_425:196740..210735+

>TCONS_00064842 ID=TCONS_00064842|Name=TCONS_00064842|organism=Clytia hemisphaerica|type=CDS|length=1458bp|location=Sequence derived from alignment at scaffold_425:196740..210735+ (Clytia hemisphaerica)
ATGGCGTCTTTGGGACAACTGATTTGTTTGACCACAATCACGTTACTGGT
GTTTATAAAGCTTGCTGAGAGCTCTGGAACGATGGAAATTAAACTTCTGA
GTTACGCTAATCCAGAACATCGAATGTCGAACGGTCGTTGCTGTGAAGAA
GGTTTAGAGAAAGATTGCAAGAGAAACGATAAAAACAGATGTATTGAATG
CACAATGGAGTGTGACCCACAATTCAAGTTCGAAATGAGACGAAACAATG
AACGAGTGATGTTTTATAACACAAGCACTTTGGAGCATAAagataatttt
gatttcaaagatGTCTTGGAACCTAATATTCACAACCCATTTATGTTGAA
TCTCTCGTCGTTCAAGGGCAATTTCACGTTTTCGATCAAATCGTTCGATC
ACGATGATCAAGGAATCGATCCCATCGATGAATCGATCTTTCAGTTCAAC
ACAAAAAGCCTGGATACAAAGATACAACCGAACAATGAAACCGTTTATCT
CTGCTCAAGTGGGAAAGTCACCAAAACTAATTTCACTATAAGATATACGT
GTGATGCAGATTTCTATGGGCCAGCTTGCGATCGATTCTGCTTGGCACAA
AATGACGTGAAGGGGCATTATACATGTGATCGTGCATCCGGTGAAATGAT
ATGTTTGGATGGTTGGACGGATGCGAAAACTAACTGCACCACTATTACAC
CAAGTTCAATGATAATTGCCCCATCAACATCTACACCCACATTGATGATG
AGTTCAACCGTAAACACTGATGCATCTTCTTCAATGATGGTGTATGGAAG
CATCCGTCCAACGAGGTCCGCTAttcaaatgatgacgtcatcagttgtTT
GTAATAGCACAATAACGAAAGTCAATTTGGACCTCAAACTTCAAGGAGAG
TTAAAATTGAACGAATTCAATGACACGATGCAACACATAATCTGTATTGA
AGTTAACAAAGCATGCTACAATCTGATTGGTCAATGCACAAAGACCTCAT
CACGTGACCAACTCAATTTGAAggatattgaaattttggaggAGCGATTT
GTTAATCAAACGTTGAGTGATTTCAAGCTAAGAATTTCTTCAGCTACAGG
AAAATGTAACGAGAACTTTGCAAAGTGTGCCCGAGAATCAATTTACAATT
CAAAACAACTACGACACCAGCTTGGTGCTGAGAAGGTAGAGATATGTACG
AACTCAAAAGGTTGTGAACAAAGAGCCACTTTATTGAATAATGATCGTAA
TAAAAAGGAAGAAGGAAAAGATGAAGTGATCATTATAGCAGTTTTATGCA
CCATGTTTGGCGTGGTAGTACTGGCCCTTGGTTTGCTCTATCTCAGGAAG
AAGAGGATGATGAAGATCGGGAATCTGGAAGATCAGAAATCTTCCAATAA
CAACAATGATGATGAAAAGACGAACATCGTTGATGACAAAGAAACATCCT
CATGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040669XLOC_040669Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064842-exon-scaffold_425-1491911889:196740..196870TCONS_00064842-exon-scaffold_425-1491911889:196740..196870Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1510915933:196740..196870TCONS_00064842-exon-scaffold_425-1510915933:196740..196870Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1575043694:196740..196870TCONS_00064842-exon-scaffold_425-1575043694:196740..196870Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1491911889:197331..197636TCONS_00064842-exon-scaffold_425-1491911889:197331..197636Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1510915933:197331..197636TCONS_00064842-exon-scaffold_425-1510915933:197331..197636Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1575043694:197331..197636TCONS_00064842-exon-scaffold_425-1575043694:197331..197636Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1491911889:207042..207217TCONS_00064842-exon-scaffold_425-1491911889:207042..207217Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1510915933:207042..207217TCONS_00064842-exon-scaffold_425-1510915933:207042..207217Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1575043694:207042..207217TCONS_00064842-exon-scaffold_425-1575043694:207042..207217Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1491911889:207497..207651TCONS_00064842-exon-scaffold_425-1491911889:207497..207651Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1510915933:207497..207651TCONS_00064842-exon-scaffold_425-1510915933:207497..207651Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1575043694:207497..207651TCONS_00064842-exon-scaffold_425-1575043694:207497..207651Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1491911889:207903..208114TCONS_00064842-exon-scaffold_425-1491911889:207903..208114Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1510915933:207903..208114TCONS_00064842-exon-scaffold_425-1510915933:207903..208114Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1575043694:207903..208114TCONS_00064842-exon-scaffold_425-1575043694:207903..208114Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1491911889:208335..208518TCONS_00064842-exon-scaffold_425-1491911889:208335..208518Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1510915933:208335..208518TCONS_00064842-exon-scaffold_425-1510915933:208335..208518Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1575043694:208335..208518TCONS_00064842-exon-scaffold_425-1575043694:208335..208518Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1491911889:208911..209172TCONS_00064842-exon-scaffold_425-1491911889:208911..209172Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1510915933:208911..209172TCONS_00064842-exon-scaffold_425-1510915933:208911..209172Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1575043694:208911..209172TCONS_00064842-exon-scaffold_425-1575043694:208911..209172Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1491911889:209667..210735TCONS_00064842-exon-scaffold_425-1491911889:209667..210735Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1510915933:209667..210735TCONS_00064842-exon-scaffold_425-1510915933:209667..210735Clytia hemisphaericaexon
TCONS_00064842-exon-scaffold_425-1575043694:209667..210735TCONS_00064842-exon-scaffold_425-1575043694:209667..210735Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064842-proteinTCONS_00064842-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_425supercontigscaffold_425:196740..210735 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.015134	0.0351441	0.068766	0.062787	0.132307	3.35208	4.66991	4.21113	16.9768	26.2424	2.49096	4.61375	2.84055	5.92202	6.39306	3.12233	3.04505	9.63463	12.9477	12.4393	14.4258	3.8258	4.7239	11.5306	10.9153	31.495	17.3739	43.615	38.8208
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001774DSL
IPR011651Notch_ligand_N
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0007154cell communication
GO:0007275multicellular organism development
GO:0007219Notch signaling pathway
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007154 cell communication
biological_process GO:0007275 multicellular organism development
biological_process GO:0007219 Notch signaling pathway
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064842 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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