TCONS_00064951 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00064951
Unique Name	TCONS_00064951
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2185

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_427:58279..64754-
coding sequence from alignment at scaffold_427:58279..64754-

transcript sequence

>TCONS_00064951 ID=TCONS_00064951|Name=TCONS_00064951|organism=Clytia hemisphaerica|type=transcript|length=2185bp
AACATAAAAAAAGTTGCAGAAAGACAGAGACATTAGAGAAGCTATGAAGA
AATATGATGGAAAGCAAAGttaTGCTGGTGGAGTTCCTGGAAGtATCATG
GATGACGATGATACACGAGCCATCAGCCCTTCCAATAACCTCTTTCAACA
GAAACTGGAACAACAGAGACAACGTACTGCAGCAAAGCAAAGGCAAAAAA
GGATGGGTTCagGTATGATGCAGGCTAACGACAATTTGAGACCACGAACA
GCGGGAAGTACGAGACCTCGATCCGCAAACAAACAATGGCAAAGTAGTGG
AGTTAACGATGGAACAGGAATGGTGAATAGTGGATTCGTTTCGGATAATC
CCAATTCCAATCACGTTAACAATGAAAATACGGACGAAGATGGAATCCCC
ACTGAAATTGTAGATGGAGGTATCCGTCAATCGCGCAACTCACCCATCAA
CAACACTTCCACAACTCAAATCGTCGACTCGTCGGACGACAATGGTGATG
ATGACGACGACATCGAATCTGCTGAACTTCCTGTCGTTCAACCTAACGTC
CGTGCTGAACGCTCGGCCTCCCCTTACCGCGATGCCGCTCCCGTAGATAT
TAAACAAGGGTCTGACTCCAACGAAAAACTACAAATGAAAAATACGTCCA
ACGATATTGAGGTTGGAGACGTCAACGAATTCATATTAAGACCAGCACCA
CAAGGCCAAACGATCAAATGTCGAATAACACGAGATAAAAAAGGTGTAGA
TAGACagatgtttccgacgtacttctTACATCTCGAAAAGGATGATGGGA
AAAAGGTATTTTTGTTAGCTGGTCGAAAACGTAAGAAAAGCAAGACCTCC
AACTATCTGATTGCGGTTGATCCGATTGATTTATCCAGAGCTGGTGAAAA
TTTCGTCGGCAAATTGAGGTCAAATCTAGTGGGCACCAAATTCACATGTT
TTGATGGCGGTAGAAGCcctaaaaagggtggtgttcTCACAGACGGTTCA
AATCTTCGAGAAGAACTATGTGCTATTATTTACGATACAAATGTGTTAGG
TTTCAAAGGACCACGAAAAATGACAGTTGTTATTCCTGGAATGGGTTTGG
ATCATCAACGTGTACCTATTCAACCACAAAACGAAAACGAATGCTTACTA
GAGAGACATAGAACGAAACACATGGAAAATCTGATTGCTTTACAAAACAA
AACTCCTGTTTGGAATGATGATACACAGTCGTACGTTTTGAATTTTCATG
GTCGCGTCACTCAAGCATCAGTGAAGAATTTTCAAGTGGTGCACGAAAAT
GACCAGGATTATATCGTGATGCAGTTTGGACGAGTTGCCGATGACGTGTT
CACCATGGATTTCAACTACCCGCTATGCGCTCTTCAAGCCTTCTCCATTG
CATTAAGTAGTTTCGATGGAAAGTTAGCATGTGAATAACGAACAAGATAG
GAAAGAAACTTTTGACTTCTTGAAATCAAATCAATCGATAGGTATAGTGT
TAGATGTCCATCGGGGCACGACATCTTTGGAGATATGAGGGAGGCTTCTG
ATTCAAGGACATGATCCATTTACCAAACAGGATTTTTCAGTTCACTAACA
GACTAACGCTTTACTGGTAAGGCTTAAGTTCGAGTTTAATGATCGTCAAA
ATTCATGGAGGAACGTTTTTTTCCAAGTGAAATCTTATCatagaacattt
ttttatttattttagataattTCTGCTTGACCTTTCTTTCATTCTTTTGC
GTGAAAAGTGCAGCATTTCAAAAGAACAGTCTATAAAAAGGTGTTCCTTT
TTAATGAAACCCTAACTATTCAGTTTCTATAATCGATTTGAAGGGTTTAC
AAAACAATGCGCACGAACTATTATTTCAAGAACTCGTGTTTAGCTTTATT
CTCTAGATATCTGATGGGGTAAGAtgaattttaccaatttttttagaaat
ttgatgttattttgtatatgtaattgtgtatttttaaagtttagATTAGT
CTGTCATTGTCAGAACGCGTGTTTCCCACAAGAAATAGGTCACGACGACA
ATCGGCTGTGCTAAAAagttttgcaaaatattttacgTTTTTATCCTTTA
GCATCGAAATTGTTATTGTATTTACCAAacaattgtaaaattttaaatga
atgaTTTTAAAGATATATTACTATtatatgaagat

Run BLAST on NCBI

protein sequence of TCONS_00064951-protein

>TCONS_00064951-protein ID=TCONS_00064951-protein|Name=TCONS_00064951-protein|organism=Clytia hemisphaerica|type=polypeptide|length=464bp
MKKYDGKQSYAGGVPGSIMDDDDTRAISPSNNLFQQKLEQQRQRTAAKQR
QKRMGSGMMQANDNLRPRTAGSTRPRSANKQWQSSGVNDGTGMVNSGFVS
DNPNSNHVNNENTDEDGIPTEIVDGGIRQSRNSPINNTSTTQIVDSSDDN
GDDDDDIESAELPVVQPNVRAERSASPYRDAAPVDIKQGSDSNEKLQMKN
TSNDIEVGDVNEFILRPAPQGQTIKCRITRDKKGVDRQMFPTYFLHLEKD
DGKKVFLLAGRKRKKSKTSNYLIAVDPIDLSRAGENFVGKLRSNLVGTKF
TCFDGGRSPKKGGVLTDGSNLREELCAIIYDTNVLGFKGPRKMTVVIPGM
GLDHQRVPIQPQNENECLLERHRTKHMENLIALQNKTPVWNDDTQSYVLN
FHGRVTQASVKNFQVVHENDQDYIVMQFGRVADDVFTMDFNYPLCALQAF
SIALSSFDGKLACE

Run BLAST on NCBI

transcript from alignment at scaffold_427:58279..64754-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00064951 ID=TCONS_00064951|Name=TCONS_00064951|organism=Clytia hemisphaerica|type=transcript|length=6476bp|location=Sequence derived from alignment at scaffold_427:58279..64754- (Clytia hemisphaerica)
AACATAAAAAAAGTTGCAGAAAGACAGAGACATTAGAGAAGCTATGAAGA
AATATGATGGAAAGCAAAGGTACAACAAGTTCTATAGTATGTGAGACAAA
ATCTAATTCATTTATGAAATTGGCATATTGTCTCAAAAGTTTAGGATCGT
GACTCAAGATGCAAAAAATACCTTTTTTGTAAAGATTGTATTTCAAGCTC
ACATAGGTATGTTAAGGGAGGTGGATTTTAAATTGCTCTCTAGAAACTTT
TTGGAAAAACGGTAATCTTTCTCACTTTGATATTGGTTTTGTGTACGAGA
TCAGGGTCAACTAGGATTCACAGAACAAAAGCAAATTAGAAACTTCACAT
TATGGTCTAGCTAGAAGCAATAACAGCTGAGAGAATAGCAAGTAGCTTTT
ATTTACTGAGAGATATTAGTATACATTAAATTTTCAATCAGCAAGAAATG
TCTACCATCTGATTTTCTGAATTAATGTATCTGTCTTTCATTTGATTCAT
GTTAAACTTAAATTTTTATATTTTTAGTTATGCTGGTGGAGTTCCTGGAA
GGTATGTCGGATTAATTTATGTGATAAGTTTCTATAAAAATAATCGTTTT
TCAGATTGTGTTTTATTTCTAGAATTGCATCCTGATAACAATAATTTGAT
GCTTAGAAATATATTTTATCATTTTGATTTCTGGTGTTTGTTGGAATTGC
ATATGCCTGCTAACAATTATTTCATCATTTTTTATATCATCACTATATAT
TACTGTCTTCTTTCACCTCACTTGACCTAATCTGACTTGGAAATAAATTT
TTTTTCTAAACAGTATCATGGATGACGATGATACACGAGCCATCAGCCCT
TCCAATAACCTCTTTCAACAGAAACTGGAACAACAGGTAAGACTTGACCA
TGACCAATGTTAATTTAGATAATAGTGTCAATACATGTCTCTACTCCTGC
AAACAAAATCATTTTGACCTTGTTAAGAATCAATTAAAAAATCAATGGTT
GTAAAGGCCGGTCTCCACCTTTGCGTGAAATAGGCGACAGTTTTTTCTTA
ACCTTTTCTGTCTGAAGAAAAGATTACGTCATAAAAAAGTTTCGCGCGAA
CAAAAAAAAGTTGAAGGAAGTTCTACTTTTTTCATCCGTTACGTCGATTT
TGACCAATGGAATTGCTTTATTTTTTGAACCGTCCATATGACCTTATAAA
AACGTCGAAAAGCTTTTGCTCATGTTGGATTCTTCTGTTATGTCAATANA
CCAAATGACCTTATAAAAACGTCGAAAAGCTTTTGCTCATGTTGCGCGAA
AGCGGAGACCGGCTTTAAATAGCAATAAATATTAGTATGCACTTTAATCG
GATGGACTTGAATACGAACCTGATACATTTACAAGAAAAAGTGAACTAAA
CAAACGTTTCTTCCATTTCTCATGTCATTCCTCGTTGAACTTAAAGGCAA
CTTGCAACTTTCAAATATCGGCTAGGCACGCTCTCTTCTTGCAGAGAATT
TTCGAAATTTCGAAATTCGATCAAGTCCTTCATCTGATAGATGATTTTAT
AAGATTTTGAAAATGGATTCTTCTGTTATGTCAATACCACGTCACCAGAA
GTTATTGATAGAAAATGAAGAGCTATAAAAAGGAAGAGCAGGCGATGAAA
AGTCTTTTGGAACACTATACTTGATACTGCAACTTCTGAGGTAAGTGCGC
TATGATCAGTATACCTAAACTCTAGCTTTTTTTTAGAGACAACGTACTGC
AGCAAAGCAAAGGCAAAAAAGGATGGGTTCAGGTAAAAATCTTTTTCAAT
TCATTAAAGAATTCAAAAGGGGCTAGCATTATTCAAGGCTGAATCTTGGG
GGTCACCCAGGTAAACGAAGGTGACAGTTATGCTTTCACCTCTTTTGGAG
CTTCTAATTTTGCTAATAGTCACAAAAATCATAAAAGTACTAAAAACCTC
AAATAAATGTTGAAGATTAAAATGTTGGCTCTATTTCCCTGATTTCCAAT
TTTCTTCCATGTAGGAGCCAAGCCAATTAAAATAACTCACTGTTCATCCT
CTTACAGGTATGATGCAGGCTAACGACAATTTGAGACCACGAACAGCGGG
AAGTACGAGACCTCGATCCGCAAACAAACAATGGCAAAGTAGTGGAGTTA
ACGGTAAAAATGTTTTCTAGTGAATCACCTGTTCTCCTTCTAGTTTCACA
ATTTTCACGTGGTCTAATGAGTTTATGCTATCTTTGAAGTTTACTTAGAC
AACTGGAGTGTTTGAAAAGCTCTACTAAAGTAAAATTGTACTTTTCCGTG
TCGATTGAAAAGTTTTTCTGTCGTTTGATTGCAGATGGAACAGGAATGGT
GAATAGTGGATTCGTTTCGGATAATCCCAATTCCAATCACGTTAACAATG
AAAATACGGACGAAGATGGAATCCCCACTGAAGTAAGAATACATTTTCAT
TCTAACACCCTTCCCTATTATTTCGTTCCCCTAACAAACAAAGGGGAGAG
ATTTATTTTTAATGCCGGCTAATTGACAAGCTCCTTTTTTATTCGTTTTG
CCTCTTCATCTTATGTTATTGTAACGCTTTTGTGTAAAGCTTTATCACAC
AAAGAGTACCATCAATAATTAATGAAGTTAAGTAGGTGAAATAACAAAGC
TTTTGGCACATTTTCACGACCACTTCTTAGGTTTTTTTCTACTAAAGATA
TCCCAAAGTACAATTTTTTAAAGTTTGACTTTCTCAACAAGAGAGAGATA
AAGAAGGGAAGATGGCATATTACAAACGTCTGCGTTACATGGGCACACCC
GATTCTTCTCCTGTAAGCCTCACTTCTCTTATATACAATCTTTTCCCTTC
CATTTTTTTCATCAAGTGAATATTCTTCTTCTTTCCCGTTTACAGATTGT
AGATGGAGGTATCCGTCAATCGCGCAACTCACCCATCAACAACACTTCCA
CAACTCAAATCGTCGACTCGTCGGACGACAATGGTGATGATGACGACGAC
ATCGAATCTGCTGAACTTCCTGTCGTTCAACCTAACGTCCGTGCTGAACG
CTCGGCCTCCCCTTACCGCGATGCCGCTCCCGTAGATATTAAACAAGGGT
CTGACTCCAACGAAAAAGTAATTGACTTTCCTTTCCTTTTTCCCTCTCTT
ATTTAAGAATTTCATCAATCTCAAATCAGAGTTGGCTTATTATTTTCTTG
ATCGAACAAAAAAGTGAAATATTTTACTTTTGTATTGCAGCTACAAATGA
AAAATACGTCCAACGATATTGAGGTTGGAGACGTCAACGAATTCATATTA
AGGTAAACTGATAAAATCAGTTTTGTGTTCTTTAGATTTTAAGTGTTTTC
GCCTACTTTGAGGTTTTAATAATTTGAAGTATACAGGTGTCATCAAAGGT
TTCTCTAACTTGTATCAAACCCACACAGGGGGGGGGGGCTTTTTTTTATT
ATGGAAATAAATGTTTCTATATGGTGGTCGATTTCTCAAGTTTACAGTTT
CCAAGTTTCCATGAAACCAAACTGAGTAAGAGTTTTATCTACAATAAATT
CATCAAACTAGAAATATAAAGTTTCCAGTGTTTTCTAGATTGATCTTTGA
TAACACAATTAGGAGAATATGAACTTGTTTTACTTTCTGATAATTAAAAC
ATGCACCTCATCTTGTCTGTCCACCCTGTACAAGAAGGTTACTCTGAGCT
TACAAACCCTTTTCTCATTATCTAAAATGAAATAGTAGAGTTAGGTGCAT
GCTAAGAATATTTCTCCTGCTCTGCAATGTGAAGCCTTTCCGTGGAAAGG
AAAATTAATTCGCAAAATTATGCACGTGCAATTTAATCTGAAGTTCAAGT
AGAAGCTTTCTGCTGACTTTCTCTTAAATAATCAACTTGTTTTTGTTTAC
AGACCAGCACCACAAGGCCAAACGATCAAATGTCGAATAACACGAGATAA
AAAAGGTGTAGATAGACAGATGTTTCCGACGTACTTCTTACATCTCGAAA
AGGATGATGGGAAAAAGGTACTTTATTTTACAATCAAATGTGTATGTGCT
GTAGTAGTGTCTACCATGGATGGTATTTTGTTGGTATTTTCATCAAAATA
TTTACAGAAGTGAGAAGAGACCTTTTAATAATTTATGCATCTTTAGGTAT
TTTTGTTAGCTGGTCGAAAACGTAAGAAAAGCAAGACCTCCAACTATCTG
ATTGCGGTTGATCCGATTGATTTATCCAGAGCTGGTGAAAATTTCGTCGG
CAAATTGAGGTAAATCAATTGTTTCTTTTTCAAACTGCTGTTTACACTTT
CCTGTCGCGTGACATTAGTACTAATAGAGAGTATTTTTTATTCCGCTTAT
ACAACTACTCAAGTTATCAACGCGAACCCTCGCTTTAATAACAACCCAAT
AACAAAATTTGACATGAGGTAATTTTCAAAAACCCTGCTTTTCGCGTTGA
TAAATTGTCTCAATCATTTTCCCGCCTAAGTGTAAGCATAGTCATTATAA
AAAAATTTTTATAATGACTATGGTGTAAGTGAAATAAGGTTTTTTCCGCT
TTATCACAGGTCAAATCTAGTGGGCACCAAATTCACATGTTTTGATGGCG
GTAGAAGCCCTAAAAAGGGTGGTGTTCTCACAGACGGTTCAAATCTTCGA
GAAGAACTATGTGCTATTATTTACGTAAGCTTTTTATTTTTTATTTTTAA
TGCTTGTAATTGATCTTATTTTACTTTTGGACTATTTTCTTTTGTTTGAG
GACATTTATCCTGGCCATAACTCGATGTAACCTTTCCATATCTTTTTTCA
GGATACAAATGTGTTAGGTTTCAAAGGACCACGAAAAATGACAGTTGTTA
TTCCTGGAATGGGTTTGGATCATCAACGTGTACCTATTCAACCACAAAAC
GTAAGTCTATCTTTGTGAGGTGGATAACTTTGCCTAATATTATCCATTGA
GGTATAACAACGAGTTTCTTTACATTTGCGCTTCTTTTTAGGAAAACGAA
TGCTTACTAGAGAGACATAGAACGAAACACATGGAAAATCTGATTGCTTT
ACAAAACAAAACTCCTGTTTGGAATGATGGTACGTACCTTCTTTTGTTTT
TATTTAAGGTGTGACTGGAGTATTATTCTCAACTTTGATAATGCCCTCCC
GCATGATGTTTTTCTGTTTGTCTTTGACTAAAAAATATACCTTTCAAAAG
GTCCAAATCTATCACCTATTTATCGCCCATTTTTGACTTCTATCGGTAAC
ATTTTGATACTTTAAGCATCACTTCGTCTCTTTTAGATACACAGTCGTAC
GTTTTGAATTTTCATGGTCGCGTCACTCAAGCATCAGTGAAGAATTTTCA
AGTGGTGCACGAAAATGACCGTAAGTCTTTCTTTTTGTTGGCCATACCTG
ATGAAACAGCAGTGCTTAACATAGGGAAGGTCTGCATATCAAGCCAAGTC
TAATTATGTGTTGACTAATTTTATGTGTTGACTATATGTATTCTTTCTAA
TGTATGCCAGTGTATGCAATAAGAAAAGTGCCAATCTCGTGTTGCCTAGG
TAGCCTATTGATTGTTTCATCGATTTAATTTTTTGTCACTTGTAGAGGAT
TATATCGTGATGCAGTTTGGACGAGTTGCCGATGACGTGTTCACCATGGA
TTTCAACTACCCGCTATGCGCTCTTCAAGCCTTCTCCATTGCATTAAGTA
GTTTCGATGGAAAGTTAGCATGTGAATAACGAACAAGATAGGAAAGAAAC
TTTTGACTTCTTGAAATCAAATCAATCGATAGGTATAGTGTTAGATGTCC
ATCGGGGCACGACATCTTTGGAGATATGAGGGAGGCTTCTGATTCAAGGA
CATGATCCATTTACCAAACAGGATTTTTCAGTTCACTAACAGACTAACGC
TTTACTGGTAAGGCTTAAGTTCGAGTTTAATGATCGTCAAAATTCATGGA
GGAACGTTTTTTTCCAAGTGAAATCTTATCATAGAACATTTTTTTATTTA
TTTTAGATAATTTCTGCTTGACCTTTCTTTCATTCTTTTGCGTGAAAAGT
GCAGCATTTCAAAAGAACAGTCTATAAAAAGGTGTTCCTTTTTAATGAAA
CCCTAACTATTCAGTTTCTATAATCGATTTGAAGGGTTTACAAAACAATG
CGCACGAACTATTATTTCAAGAACTCGTGTTTAGCTTTATTCTCTAGATA
TCTGATGGGGTAAGATGAATTTTACCAATTTTTTTAGAAATTTGATGTTA
TTTTGTATATGTAATTGTGTATTTTTAAAGTTTAGATTAGTCTGTCATTG
TCAGAACGCGTGTTTCCCACAAGAAATAGGTCACGACGACAATCGGCTGT
GCTAAAAAGTTTTGCAAAATATTTTACGTTTTTATCCTTTAGCATCGAAA
TTGTTATTGTATTTACCAAACAATTGTAAAATTTTAAATGAATGATTTTA
AAGATATATTACTATTATATGAAGAT

Coding sequence (CDS) from alignment at scaffold_427:58279..64754-

>TCONS_00064951 ID=TCONS_00064951|Name=TCONS_00064951|organism=Clytia hemisphaerica|type=CDS|length=1395bp|location=Sequence derived from alignment at scaffold_427:58279..64754- (Clytia hemisphaerica)
ATGAAGAAATATGATGGAAAGCAAAGTTATGCTGGTGGAGTTCCTGGAAG
TATCATGGATGACGATGATACACGAGCCATCAGCCCTTCCAATAACCTCT
TTCAACAGAAACTGGAACAACAGAGACAACGTACTGCAGCAAAGCAAAGG
CAAAAAAGGATGGGTTCAGGTATGATGCAGGCTAACGACAATTTGAGACC
ACGAACAGCGGGAAGTACGAGACCTCGATCCGCAAACAAACAATGGCAAA
GTAGTGGAGTTAACGATGGAACAGGAATGGTGAATAGTGGATTCGTTTCG
GATAATCCCAATTCCAATCACGTTAACAATGAAAATACGGACGAAGATGG
AATCCCCACTGAAATTGTAGATGGAGGTATCCGTCAATCGCGCAACTCAC
CCATCAACAACACTTCCACAACTCAAATCGTCGACTCGTCGGACGACAAT
GGTGATGATGACGACGACATCGAATCTGCTGAACTTCCTGTCGTTCAACC
TAACGTCCGTGCTGAACGCTCGGCCTCCCCTTACCGCGATGCCGCTCCCG
TAGATATTAAACAAGGGTCTGACTCCAACGAAAAACTACAAATGAAAAAT
ACGTCCAACGATATTGAGGTTGGAGACGTCAACGAATTCATATTAAGACC
AGCACCACAAGGCCAAACGATCAAATGTCGAATAACACGAGATAAAAAAG
GTGTAGATAGACAGATGTTTCCGACGTACTTCTTACATCTCGAAAAGGAT
GATGGGAAAAAGGTATTTTTGTTAGCTGGTCGAAAACGTAAGAAAAGCAA
GACCTCCAACTATCTGATTGCGGTTGATCCGATTGATTTATCCAGAGCTG
GTGAAAATTTCGTCGGCAAATTGAGGTCAAATCTAGTGGGCACCAAATTC
ACATGTTTTGATGGCGGTAGAAGCCCTAAAAAGGGTGGTGTTCTCACAGA
CGGTTCAAATCTTCGAGAAGAACTATGTGCTATTATTTACGATACAAATG
TGTTAGGTTTCAAAGGACCACGAAAAATGACAGTTGTTATTCCTGGAATG
GGTTTGGATCATCAACGTGTACCTATTCAACCACAAAACGAAAACGAATG
CTTACTAGAGAGACATAGAACGAAACACATGGAAAATCTGATTGCTTTAC
AAAACAAAACTCCTGTTTGGAATGATGATACACAGTCGTACGTTTTGAAT
TTTCATGGTCGCGTCACTCAAGCATCAGTGAAGAATTTTCAAGTGGTGCA
CGAAAATGACCAGGATTATATCGTGATGCAGTTTGGACGAGTTGCCGATG
ACGTGTTCACCATGGATTTCAACTACCCGCTATGCGCTCTTCAAGCCTTC
TCCATTGCATTAAGTAGTTTCGATGGAAAGTTAGCATGTGAATAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_040729	XLOC_040729	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00064951-protein	TCONS_00064951-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_427	supercontig	scaffold_427:58279..64754 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.88752	8.11936	53.7774	64.8217	89.2574	62.9296	79.3192	72.7306	41.7181	42.8535	38.9704	25.3834	15.156	15.3796	16.4252	15.6981	18.5171	17.1442	12.1957	18.2033	18.722	17.8064	15.9836	16.5193	40.9369	48.0161	29.7824	27.7895	21.7335	17.8108

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000007	Tubby_C
IPR018066	Tubby_C_CS
IPR025659	Tubby_C-like

Blast

[Close]

BLAST of TCONS_00064951 vs. Swiss-Prot (Human)
Match: TUB (Tubby protein homolog OS=Homo sapiens GN=TUB PE=1 SV=1)

HSP 1 Score: 427.557 bits (1098), Expect = 6.291e-141
Identity = 193/262 (73.66%), Postives = 230/262 (87.79%), Query Frame = 2

Query:  653 DIEVGDVNEFILRPAPQGQTIKCRITRDKKGVDRQMFPTYFLHLEKDDGKKVFLLAGRKRKKSKTSNYLIAVDPIDLSRAGENFVGKLRSNLVGTKFTCFDGGRSPKKGGVLT-DGSNLREELCAIIYDTNVLGFKGPRKMTVVIPGMGLDHQRVPIQPQNENECLLERHRTKHMENLIALQNKTPVWNDDTQSYVLNFHGRVTQASVKNFQVVHENDQDYIVMQFGRVADDVFTMDFNYPLCALQAFSIALSSFDGKLACE 1435
            D+EV D+ EF LRPAPQG TIKCRITRDKKG+DR M+PTYFLHL+++DGKKVFLLAGRKRKKSKTSNYLI+VDP DLSR G++++GKLRSNL+GTKFT +D G +P+K    T +   LR+EL A+ Y+TNVLGFKGPRKM+V++PGM + H+RV I+P+NE+E LL R + K+ E++I LQNKTPVWNDDTQSYVLNFHGRVTQASVKNFQ++H ND DYIVMQFGRVA+DVFTMD+NYPLCALQAF+IALSSFD KLACE
Sbjct:  245 DVEVQDLEEFALRPAPQGITIKCRITRDKKGMDRGMYPTYFLHLDREDGKKVFLLAGRKRKKSKTSNYLISVDPTDLSRGGDSYIGKLRSNLMGTKFTVYDNGVNPQKASSSTLESGTLRQELAAVCYETNVLGFKGPRKMSVIVPGMNMVHERVSIRPRNEHETLLARWQNKNTESIIELQNKTPVWNDDTQSYVLNFHGRVTQASVKNFQIIHGNDPDYIVMQFGRVAEDVFTMDYNYPLCALQAFAIALSSFDSKLACE 506

The following BLAST results are available for this feature:

BLAST of TCONS_00064951 vs. Swiss-Prot (Human)

BLAST of TCONS_00064951 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TUB	6.291e-141	73.66	Tubby protein homolog OS=Homo sapiens GN=TUB PE=1 ...	[more]

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TCONS_00064951 (transcript) - C. hemisphaerica