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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065061 ID=TCONS_00065061|Name=TCONS_00065061|organism=Clytia hemisphaerica|type=transcript|length=899bp
CCCGGGTTTATATTCATCTAAATGTTGATTTGTTTGTTTCTTTAGATCTG
TAACTAAAACAAAAATACCATGGCTGTCATCAGTATTGTCCTTTATAATT
CAACCATCATGAGTCTTTTGACACAGGACGATCGGGAGAGTCGAAAGAGT
GGAATCTAGTGAGGTTATTTGTGAAAATTGGTCAGCTTTGGTCCATCGAA
CCGGATACAATAGGGCTGGCCTACTTTGAAGTTGGTAGACCAGTGCTAAT
AAGGATGACAGAGGACGAAATAGACATTCCGGACAATGAGGAATGGACCA
AGTTTGATGTATGTAGTCTTATAGTCTTGTAGGCTTCATCTTGAAGGAGC
AAAATAAACCGGAGGAGATAATGGTGGAGGATAACATCAATTGAATGAAA
GATCGGATAGTGACCCTAGAGAAGGAAGTGGAAAAATTGAATAAGCTGAA
TGATGAGGTGACTGAGCTAAAGTCTAAAATCATGAAACCCGAGAATCTAT
CCAAGCACAAGTTTCGACAACTTTGTCCGGCAAATACAGCACAACGCTGT
TGCAATCAACCTGAGACTTTTGAAAAGTGTAAAGCTCCTTGTTGAACGGA
ATGTGAATGTGTgtcaatttgttgttttttctattttgttctGCCCTATA
TTTCAGCTATCCTGTGGCACTGTTTTGGCCAATCTAACTTGCCCAGCTTT
GAGAATAGACCAGTATTTAGCTTCCTTGGCTTGCCTTTCTAAATCATATA
CTTTGCTTCTgctgttcttaatttgtatTTTCATATTCTAAGCGTATATa
gattttaatatattttcatGGATACTACTTCATATTTTAAACTGTATAAT
AACTTAAAAAAGAAACTCTTCAGTTTTTCCTGCTCTTTTGTATTTGATG Run BLAST on NCBI transcript from alignment at scaffold_428:92956..93854 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065061 ID=TCONS_00065061|Name=TCONS_00065061|organism=Clytia hemisphaerica|type=transcript|length=899bp|location=Sequence derived from alignment at scaffold_428:92956..93854 (Clytia hemisphaerica)
CATCAAATACAAAAGAGCAGGAAAAACTGAAGAGTTTCTTTTTTAAGTTA
TTATACAGTTTAAAATATGAAGTAGTATCCatgaaaatatattaaaatct
ATATACGCTTAGAATATGAAAatacaaattaagaacagcAGAAGCAAAGT
ATATGATTTAGAAAGGCAAGCCAAGGAAGCTAAATACTGGTCTATTCTCA
AAGCTGGGCAAGTTAGATTGGCCAAAACAGTGCCACAGGATAGCTGAAAT
ATAGGGCagaacaaaatagaaaaaacaacaaattgacACACATTCACATT
CCGTTCAACAAGGAGCTTTACACTTTTCAAAAGTCTCAGGTTGATTGCAA
CAGCGTTGTGCTGTATTTGCCGGACAAAGTTGTCGAAACTTGTGCTTGGA
TAGATTCTCGGGTTTCATGATTTTAGACTTTAGCTCAGTCACCTCATCAT
TCAGCTTATTCAATTTTTCCACTTCCTTCTCTAGGGTCACTATCCGATCT
TTCATTCAATTGATGTTATCCTCCACCATTATCTCCTCCGGTTTATTTTG
CTCCTTCAAGATGAAGCCTACAAGACTATAAGACTACATACATCAAACTT
GGTCCATTCCTCATTGTCCGGAATGTCTATTTCGTCCTCTGTCATCCTTA
TTAGCACTGGTCTACCAACTTCAAAGTAGGCCAGCCCTATTGTATCCGGT
TCGATGGACCAAAGCTGACCAATTTTCACAAATAACCTCACTAGATTCCA
CTCTTTCGACTCTCCCGATCGTCCTGTGTCAAAAGACTCATGATGGTTGA
ATTATAAAGGACAATACTGATGACAGCCATGGTATTTTTGTTTTAGTTAC
AGATCTAAAGAAACAAACAAATCAACATTTAGATGAATATAAACCCGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065061-exon-scaffold_428-1491911889:92956..93854 | TCONS_00065061-exon-scaffold_428-1491911889:92956..93854 | Clytia hemisphaerica | exon |
| TCONS_00065061-exon-scaffold_428-1510915933:92956..93854 | TCONS_00065061-exon-scaffold_428-1510915933:92956..93854 | Clytia hemisphaerica | exon |
| TCONS_00065061-exon-scaffold_428-1575043694:92956..93854 | TCONS_00065061-exon-scaffold_428-1575043694:92956..93854 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_428 | supercontig | scaffold_428:92956..93854 . |
Blast
The following BLAST results are available for this feature:
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