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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065180 ID=TCONS_00065180|Name=TCONS_00065180|organism=Clytia hemisphaerica|type=transcript|length=895bp
aattttcgtgtttttcatGCCCTTAGTGCCATTCATAATttcaaataatt
caattttttgatctcATTTTAGGCTCGtaaatttcttgattttattttag
tttttggccaaaatttagCATCAATTTCTTATTCAGAAAGCATATATTTA
ctgggtggtccaaaaaaagtttctatttgTGTTGTGgacttcaaattaat
tttacatggtgaatttttaacattttatctGTGTCACTCCTTAAAATTTC
TGAACTTATGGAAACTTTTTCGGACCACCCGGTAGTAGAACATAAAGAAT
ACACgcatttcctattagcagattcatataaaaaagtcacgaaaaaacgt
cgagtaaagctctgaCNTTAGCAGATTCatataaaaaagtcacgaaaaaa
cgtcgagaaaAGCTCTGATTGGCTTAGAAATGCTTacataaacatatttt
tatcaACATGACCaaagtatgaggtaatctttgcatgttTCAGCCAATCA
AAGCTTTACTTGACGTTTTGTCATGCGACTTTtatatgaatctgctaata
ggaaatttgTGTATTCATTCTCTCATAATTTTGACATTAAATTCACGACT
AGAATCGATCAAAGTCTTTATCTATCCAAGAAAACTTTTCTTCCGATTCT
TCTACGACCGTGCCTCGATTTGTCATCATGAAACTTCTCCACCAATATAA
ATCGCTTGTTCTGTacatttttatcacgtgaccaATAATCATCCAATAAG
GATCGTTCATTAGCTTCATTTCTCTCATGTGACCATTTTTGATCCAATAG
CAATCGTCTATTTGCCATTATTTTCTCACGTGTTACACCACCAAACAATG
AATCACAATAGTCTTTGTTGTGTTTACAGAATGCCAAAATTTTCG Run BLAST on NCBI transcript from alignment at scaffold_433:301569..302539+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065180 ID=TCONS_00065180|Name=TCONS_00065180|organism=Clytia hemisphaerica|type=transcript|length=971bp|location=Sequence derived from alignment at scaffold_433:301569..302539+ (Clytia hemisphaerica)
aattttcgtgtttttcatGCCCTTAGTGCCATTCATAATttcaaataatt
caattttttgatctcATTTTAGGCTCGtaaatttcttgattttattttag
tttttggccaaaatttagCATCAATTTCTTATTCAGAAAGCATATATTTA
ctgggtggtccaaaaaaagtttctatttgTGTTGTGgacttcaaattaat
tttacatggtgaatttttaacattttatctGTGTCACTCCTTAAAATTTC
TGAACTTATGGAAACTTTTTCGGACCACCCGGTAGTAGAACATAAAGAAT
ACACgcatttcctattagcagattcatataaaaaagtcacgaaaaaacgt
cgagtaaagctctgaCNTTAGCAGATTCatataaaaaagtcacgaaaaaa
cgtcgagaaaAGCTCTGATTGGCTTAGAAATGCTTacataaacatatttt
tatcaACATGACCaaagtatgaggtaatctttgcatgttTCAGCCAATCA
AAGCTTTACTTGACGTTTTGTCATGCGACTTTtatatgaatctgctaata
ggaaatttgTGTATTCATTCTCTCATAATTTTGACATTAAATTCACGACT
AGAATCGATCAAAGTCTTTATCTATCCAAGAAAACTTTTCTTCCGATTCT
TCTACGACCGTGCCTCGATTTGTCATCATGAAACTTCTCCACCAATATAA
ATCGCTTGTTCTGTacatttttatcacgtgaccaATAATCATCCAATAAG
GATCGTTTATTAGCTTCATTTCTTTCATGTGACANTCTGTacatttttat
cacgtgaccaATAATCATCCAATAAGGATCGTTCATTAGCTTCATTTCTC
TCATGTGACCATTTTTGATCCAATAGCAATCGTCTATTTGCCATTATTTT
CTCACGTGTTACACCACCAAACAATGAATCACAATAGTCTTTGTTGTGTT
TACAGAATGCCAAAATTTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065180-exon-scaffold_433-1491911889:301569..302284 | TCONS_00065180-exon-scaffold_433-1491911889:301569..302284 | Clytia hemisphaerica | exon |
| TCONS_00065180-exon-scaffold_433-1510915933:301569..302284 | TCONS_00065180-exon-scaffold_433-1510915933:301569..302284 | Clytia hemisphaerica | exon |
| TCONS_00065180-exon-scaffold_433-1575043694:301569..302284 | TCONS_00065180-exon-scaffold_433-1575043694:301569..302284 | Clytia hemisphaerica | exon |
| TCONS_00065180-exon-scaffold_433-1491911889:302361..302539 | TCONS_00065180-exon-scaffold_433-1491911889:302361..302539 | Clytia hemisphaerica | exon |
| TCONS_00065180-exon-scaffold_433-1510915933:302361..302539 | TCONS_00065180-exon-scaffold_433-1510915933:302361..302539 | Clytia hemisphaerica | exon |
| TCONS_00065180-exon-scaffold_433-1575043694:302361..302539 | TCONS_00065180-exon-scaffold_433-1575043694:302361..302539 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_433 | supercontig | scaffold_433:301569..302539 + |
Blast
The following BLAST results are available for this feature:
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