TCONS_00065190 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065190
Unique NameTCONS_00065190
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2098

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065190 ID=TCONS_00065190|Name=TCONS_00065190|organism=Clytia hemisphaerica|type=transcript|length=2098bp
CTAAAATGTCGTATGAAAAACGCGCGAAAATTTGTTGATAATCCTTTTCC
CTTTCGATAGTTTTCGAGATAAGTCACGCATTCGTTTTCACCAACAAAAA
GATAAAACATGTACTCCGTTCTTGTTTGGACATTAAAAGGTAATGAAGAG
CTAAAGCCTGCCTTGGTGGAGGTAATGAAGTCCAATGATATTGTATCCAT
CAACGGCAAAGTTTTTTACAAACATCAGGGGTGTCAGTATGAAGGAAGAG
AAGAATCTTACTTTGAAACTCGACAGCAAGCGTTAAAGCGAGCTGAAGTT
GTTAAGGGTATTGAAAGCTTAAAATGTGATAGCCGGCCGAAACGTCGATT
AATACCAAAACGATTTctagaagaaggagaagaagaagaagcagaaGAAC
AACAAGAAGAAGAGCTGCAAAATGCTGTTGTTTTATGTGAAATTGATGTG
ACCAcccctcaaaagaaaaaaaagaaacgaaTTGCAAACACTCAGAAAGC
taaaaaacaaacacagaaaGCATCAAAACCCTCAAAGAAGGTTGATCAAA
ATCAGGATGGTTTGTCTCGTTTGGTTAAAACAATACATCCAGAAAAAGTA
GTAGAAGAATGTACATTCTCAGATATCCTGAAAACTATCAATCCAAGCAT
taatgatTTGTCCACTTCGACAGGGGTAACAAACCGTAATACATCCACTT
TGACAGGGGCAACGAACCATGCTACATCCCCTTCGACAGGGGGAACGAAC
CATGCTACATCCCCTTCGACAGGGGCAACGAACCGTGATACATCCACTCC
GACAGGGGCAATGAACCGTGATACATCCACTTCGACAGGGGCTATGAACT
ATAATACTTCCACTTTAACAGGGGCAATGAGTCGTAATGAAAAACATaat
gatTTGTCCACCTCGATAGGGGCAACGAACCGTGATTCATCCACTTCAAC
AGGGGCAACGAACCATGATTCATCCACTTCGACAGGGGCAACGAACCATG
ATTCATCCACTTCGACAGGGGCGATGAACCGTGATACATCCACTTCGACA
GGGGCAATGAACTATAATACTTCCACTTTGACAGGGGCAATGCGTCGTAA
TGAAAAACAGagagATACATCCACCTTGACAGGGGCAATGAGCCATGATA
CGTCCACCTGGACAGGGGCAATGAGCCATAATGAAAAACAgGATACTAGC
TTCACATTTTCAAGTGACGAAGACGAGAACGATGAAAATGTGCCGGACGT
TCAAAGAACACCACagGTTGCGTCAGCAGCTATGAACAAATTACCTGGTG
GATCACCTGACATAATCAATAAATTCAAAAGCCGGCTTCAATCAAaggag
ctatttcaaaagaagaCGTCTGCTTCTTCGTGTGatgaatgtgaaaaaaa
aacgcaagaaataaataaattgagaGGCTTACTTGCTCAAATCCATGGAC
TGGCTGGCAACCACGACAGACCATCCCAAAACAGCCCTACAGCGAGCCCT
ATTCCATTTAATAATAGCTTGGTATCAACTTCAAATATTACTCCACAGCG
AGCCATCAGCTTGATCCCGCTCGTTAAAGAGGAAACTTTGTTAGTGCCAA
AGCTGGAATTCTTCAACATGAAGAGTGATGCACTGACGAAGCATAATCCA
GGCAAATACCTCCTGAATGAGTTGATCAAGCTTGTTTTTACGGTCGATGA
ACTAGCCAGCCACAAAGCTACTCACAGTCGCTCAGTAAAAAGCCAGCGTC
CTGGTTTAGATGAAACTAAATGCAATACTATACGAGCCTTTATCAATAAG
TTCACTGGAGAGAATTGTCCAACAAAGCCACTGTCGTCGGAAGAAATGAG
AAAAGTTTTTGAGTCTCAAATCGGTGCGgcaaggaagaagaaaaaaaatt
cgctTGTCCCATATGTTCCTAGTTCCgaataaattgtaaatttgtttaat
tTGTAATTAACAATAATTTCGCAAGATTTCCTCTTGCATTAATCTCGGCT
GTATCATGGTTATTTCTTGGTTATTTCCCTTGTTTTGAACGGCATTTTCA
GGTCTTTTGCGCATTAGCGTTAGTGGGTAAAATTCTCGTTAACGACCG
Run BLAST on NCBI

protein sequence of TCONS_00065190-protein

>TCONS_00065190-protein ID=TCONS_00065190-protein|Name=TCONS_00065190-protein|organism=Clytia hemisphaerica|type=polypeptide|length=607bp
MYSVLVWTLKGNEELKPALVEVMKSNDIVSINGKVFYKHQGCQYEGREES
YFETRQQALKRAEVVKGIESLKCDSRPKRRLIPKRFLEEGEEEEAEEQQE
EELQNAVVLCEIDVTTPQKKKKKRIANTQKAKKQTQKASKPSKKVDQNQD
GLSRLVKTIHPEKVVEECTFSDILKTINPSINDLSTSTGVTNRNTSTLTG
ATNHATSPSTGGTNHATSPSTGATNRDTSTPTGAMNRDTSTSTGAMNYNT
STLTGAMSRNEKHNDLSTSIGATNRDSSTSTGATNHDSSTSTGATNHDSS
TSTGAMNRDTSTSTGAMNYNTSTLTGAMRRNEKQRDTSTLTGAMSHDTST
WTGAMSHNEKQDTSFTFSSDEDENDENVPDVQRTPQVASAAMNKLPGGSP
DIINKFKSRLQSKELFQKKTSASSCDECEKKTQEINKLRGLLAQIHGLAG
NHDRPSQNSPTASPIPFNNSLVSTSNITPQRAISLIPLVKEETLLVPKLE
FFNMKSDALTKHNPGKYLLNELIKLVFTVDELASHKATHSRSVKSQRPGL
DETKCNTIRAFINKFTGENCPTKPLSSEEMRKVFESQIGAARKKKKNSLV
PYVPSSE
Run BLAST on NCBI

transcript from alignment at scaffold_433:8394..17469-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065190 ID=TCONS_00065190|Name=TCONS_00065190|organism=Clytia hemisphaerica|type=transcript|length=9076bp|location=Sequence derived from alignment at scaffold_433:8394..17469- (Clytia hemisphaerica)
CTAAAATGTCGTATGAAAAACGCGCGAAAATTTGTTGATAATCCTTTTCC
CTTTCGATAGTTTTCGAGATAAGTCACGCATTCGTTTTCACCAACAAAAA
GATAAAAGTAAGTTGAAAATGCATTGAATATATATAGAATAAAGGCTCAT
TGAAACAAGGAAAATCACATAGTCTATTTTATAAAAAGTGGTACAAAATA
GATTATTTCCATTTGTATTCGATCATTCCGATTTTTCATCTTGCAGTCAG
GCAAATCCTAATAATCCTTGCATTTATGCACGGGAGCGAGATCCAATACT
ACGTTGCAAATAATGGTTCTAAAGCTCTAAATTTACATGAAAGGAATGTT
AGTCTCACACACTTATTTATTACCACACTACTTTCACGCATTTTCGACCA
TGGAGGTAGAAAGAAAGCAGGAGATGAATGTATTTTTCCCTCTCTGATTG
CTGTTCAAAATCTATTGCATTGTAAGCGTTGTCCTTTGATTTTCCAGGCT
TGCCCGATAGCTCACTCCATTTCACTGGATGTGTCAACATTTATAAAGAA
AATTGTTCAAATTATTTGGGAGAAATTATGATATAAATTGGCTCTTAATT
AGCTTTAAATCCCTTTAAAGTTATATTAAGTATGAAATGATCAAGTCTGC
TTGCTTGTAAATTATAATTTAACTTAAAAAAGTGAATTTTTACTTGCATA
AGACAGCCATAAACATTTTGAAAGACAACAAACTTTACATGCTACTTTCA
TAAACTATTAGCTTGGAGGATTTTGGAGGAAACTAAAATTTATTTGTCTT
TTAGCTTGATCATTTTCTGAAAAAATAAATATAAAATATCCAGGATTGCG
AATAAGTTTATAGAGTTAAAACTAAAGGGTCTTGACATCAAGCGATTTCA
TTTCACAATGGAAATTCTTTCATAGTTGCGCCAAGTGTCCCGCATTAAGC
GGGACATGTATGCAAATCGACCATTTTTCCCACTGTACGTTCGCATTGCC
TGTATCCCGCATTTCAAAAACCTATAAAAATGCGCTAAAAGTCAGGCAAA
AATTACAAAAATCAACCCAATAATCGAAAAAGTACCTAATAAATTTTAAT
CAAAACTAATTGAAAAAGAATATTGAAAAATTTGATTAGGTTGAAGAGTA
TTTGATTATTTTTGATGGATTCATTCGATTAAGAATCAAATTTATTGCAT
TTATTTACTTTGTTTTCAGCATGTACTCCGTTCTTGTTTGGACATTAAAA
GGTAATGAAGAGCTAAAGCCTGCCTTGGTGGAGGTAATGAAGTCCAATGA
TATTGTATCCATCAACGGCAAAGTTTTTTACAAACATCAGGGGTGTCAGT
ATGAAGGAAGAGAAGAATCTTACTTTGGTATGTAAATTTTGCACCTATCT
GAGGTGTTCTAAGATAATAACGGTTTCCAATTACCTGAAAAGAAATATTC
CAGTTTTGAGAAAAGGAAGTTAAAGATGGAGGGAAAATTCCCTGATTTTG
AATTTTGAGAAATCAGATTGTCATAATAGTTAAGATTCAAAACTAGTGTA
CGATCAGGGGCTATTTCGTAATGAAAACTACTCTTTATGTGCTTTAATTC
ACGTTTTTATATTATGTTTGTGTTTAAATTTGTTTTCAGAAACTCGACAG
CAAGCGTTAAAGCGAGCTGAAGTTGTTAAGGGTATTGAAAGCTTAAAATG
TGATAGCCGGCCGAAACGTCGATTAATACCAAAACGATTTCTAGAAGAAG
GAGAAGAAGAAGAAGCAGAAGAACAACAAGAAGAAGAGCTGCAAAATGCT
GTTGTTTTATGTGAAATTGATGTGGTAATTGTTCAGAAAATATTTTATTA
CATTAAAGCATGGTTTCCACCAGTGCGATAAGGGATCTTAAATTGGTGAG
AACTTATTTTGGCCAAAATAAAAGAAATTGCCCATTCGACAAGATAAGTT
TTAGGATTTTTGCTGCTCCCTAAAATTAGTTCTCTCCAAAATAAAACTCC
CTTAAATGTAATTATTGATGGCGGTCATTTGTTTTTTGCAAACTTGAGTT
AAAATGAAACATTCAACATGATAAGCGTAATCTGAAAAGAATCCAAAATT
TTGAGTGAAGACCGGCTGTGACATCAATTTTTGTAATGGAATGTTTGTGT
CAATCTTTTCAAGTGAAAACAAAAAGTTGTTGTGAGTTGAAAAGGGTTTC
ATAATATACAAAATAGGCAAACTTTGGTAATCTATATACTAACTGTTTGT
TTTGGAATACTGTAAATATTGACATCTTTCAAACATATTGCCCTCACAAG
CTTGCGTTCATACTTTATGACATCTGTCAATATTTTACAGTTTTGCCCTT
ATTATTACAATTTTTTTAGTTTATTTTTTAAGTCAGGACCAATAGTAATA
TCAGTTATTTGTAACTGTCTGCATTATCCTGTAAAAATATTCAATAAAAA
AAACAAAATCAAAACAGTTAGTATAGGGTTAAGCAGGGTTAGGACATTAA
TTCTGTTTTTTTTTTTGAAAGATGACCCGTAATGCAAAAAAGGATCTAAA
ATGGATGTAGTAAATGAAGTTTATATTCTATTAACATACCCTTGCTTTTT
ATAATTATAGACCACCCCTCAAAAGAAAAAAAAGAAACGAATTGCAAACA
CTCAGAAAGCTAAAAAACAAACACAGAAAGTAAGTAAAAGTACACTACAG
TTGCTGCTCTCTAATTTGATTTTCAAGAGGATTGAATTTTCATCCCTAAT
CTAATAAACACAAATTAAATAAATGAATTATAGAGCAAGGGAAGAAGAAT
ACTACAAAAAAAGATTGGTAACATAAAATACAACAAATAATGTGTTATTT
ACAATAGTTTCTTAAAAAAAATGACTGAGAGCTTGAATTTAATCAAATAC
TGGAGCTTATCAAATGATAGGATGTTGAATTAGAGTCTCAACTAAAAATT
TAGATAATTTAATTTTTAATTTAATTCAGGCATCAAAACCCTCAAAGAAG
GTTGATCAAAATCAGGATGGTTTGTCTCGTTTGGTTAAAACAATACATCC
AGAAAAAGTAAGCTTTACATTTCATCACTGGTGGCCTGGTAAGGGTGCAC
TGTTAGGTGGATCAATTTTTGGAATGGATTTAAGAGGCTCCTAACAGACC
TAAAAATCTAAAATTAGCGAGTTGGGGGCGTTTATTTGGCACCAAGAGTA
TTGTCCTTGGCCTTATGGGGTAGGTTTCAATTTTTAAAGATCAACCAGTG
TTTATACAGATCTTATCACTCATTTTAGTTAATTTTGTTTATCAGGTAGT
AGAAGAATGTACATTCTCAGATATCCTGAAAACTATCAATCCAAGCATTG
TAAGAATTTCTTTTGTACACAAGTATTACTCTTGGATACCTAATAGATGG
GGATAGGAATAAGCAGGGGGTTAAAAAATCTCAAAACTTAGTAAACAGAG
AGGTTGGGATTAAAATTTGCAGGGTGGAAAATATGGAAAAGGCAGCTAAT
CTATATTATAATACCCAAAAATCAAAACTATCCAATTCTTGCATCATGCT
TTTTCGCTTTTTAAAGCACACAGCATTTTTTCCCGAATTTTAGTATGTAG
GGGCAATGAGCCATAATACATATCTTCAGTAAAATGTGGGTTATTGACAC
TTTCTACTACAGGCAAGGTTAATTTCTTGGGAAACCGCTCGTGCAATTTG
ATTGCACTTTGGTCGTGAAATTAATTCTAACTTGCCCTCCTTCCTACGAT
TATTAGAACCAATTATTTTCTTTTTTAGAATGATTTGTCCACTTCGACAG
GGGTAACAAACCGTAATACATCCACTTTGACAGGGGCAACGAACCGTGAT
ACATCCACTTTGACAGGGGCAACGAACCATGCTACATCCCCTTCGACAGG
GGGAACGAACCATGCTACATCCCCTTCGACAGGGGCAACGAACCGTGATA
CATCCACTCCGACAGGGGCAATGAACCGTGATACATCCACTTCGACAGGG
GCTATGAACTATAATACTTCCACTTTAACAGGGGCAATGAGTCGTAATGA
AAAACATGTGAATATCATTATTTTTTTCCTACAATTGATAGAACATTTGA
ATATGTACTAGTAATAACATGGTTTAGAGGGTGATTTGGGATTAATAACC
CCGAGGTTCATTGAAAATATTTAAAAATAGCTCGAACGTAGTGAAAACTA
TAAAAAACATTCGACTGACACGCTTATTTTGATTGGCTTAAAAATTTTAT
ACAATATTTTGTTAACCAATCAAAATATCGTACGATACTTTTCTTTCAAC
CAATAGAAATTTTTGTTTACATCAGGGTGATTACAAAAAAGCGGGCTATT
ACGGATTTATCGCCCTGCTCGTCCTTTACAAATCTAAGCTAAATGTAATC
AACCATATAATTAGGGTCAGTAAAATGCTTGAGTTATTGACACTTTATAC
TAGAAGCAAGGTTAATTTCTTGGGAAAGGGATTTGTAAAATTTAAGACAT
GAAAAGGGTGGTAAGAAAATGTTTTTTTTCCAAAAATGAATAACCTGCTG
TCGCTCGTGCAATTTGACTACACTTTGGTCGTGAAATTAATTCTAGCTTC
TACCCTCCTTCCTATATACGATTATTAGAAGCAATTATTTTCTTTTTTAG
AATGATTTGTCCACCTCGATAGGGGCAACGAACCGTGATTCATCCACTTC
AACAGGGGCAACGAACCATGATTCATCCACTTCGACAGGGGCAACGAACC
ATGATTCATCCACTTCGACAGGGGCGATGAACCGTGATACATCCACTTCG
ACAGGGGCAATGAACTATAATACTTCCACTTTGACAGGGGCAATGCGTCG
TAATGAAAAACAGGTGAATTTTCATTATCTTTTTCCTACAATTGATAGAA
CATTTGAATATGGGTCAGTAAAATGCTTGAGTTATCGACACTTTATACTG
AAAGCACGGTTAATTTCTTGGGAAAGGGATTTGTAAAATTTAAGACATGA
GAAGGGTGGTAAGAAAATGTTGTTTTTTTTCAAAAAAATTAATAACCTGC
TGTCGCTCGTGCAATTTGATTACACTTTGGTCGTGAAATTAATTCTAACT
TGCCCTCCTTCCTATACGATTATCAGTACCAATTATTTTCTTTTTTAGAA
TGATTTGTCCTTTATATGATTCACCTTTATAGCCCTAGCTTTTAAGGTAC
TACCTTAAAAGAAGAAATTTTGGCAGAAAGAAAATTTGAAGGATTTGGAT
TTACTCAAAATCTGCCAAATTAGGCCAAAAAGCCAAAATTAATATTCTCC
ATCATCCGCTAAATTAAATTCCCGCCAAATTTAAATTTTTTTATTGACAT
CCTAAATTTGTGCTATTTCAAGCCTCAAAACTGGTTTTTCGCTTACTTAA
TAACGCTTAATTCGCTAAATTAAATTCTGCCAAATTTTATTTTCTCAGCC
ATCCGTCAAATTAAATTCCCTCCAAAATTTCTTCCTTTAAGGTATTATCA
ATCCAATTATTTTCATTTTTAGAGAGATACATCCACCTTGACAGGGGCAA
TGAGCCATGATACGTCCACCTGGACAGGGGCAATGAGCCATAATGAAAAA
CAGGTGAAATTTTGTTGTTTTTCTCCTACAATTGGTGTCTTGAAGGTAGA
AATTTTGACGGAAAATTTGGTGGATTTGGCGGAGTTAGCACGCACTGTAT
ACTTCAAGTAAGGTGAATTCCTTGAGAGAGGGTTCTGTAAGTTTTAAGAC
ATAGAAAGAATATTTTATCACCATATCAGAATTGGTTTACATTGGCTTTT
TCAGTGTAAGTTTTGATATTACTTTTGCAATCAAGTTTCAATTAAAGGGA
ACGACCGCTTATAAATATAGGGCATTGAGGAAACTGCCAGTTTCTAGGTA
TACTCTGAAATAAGTGCTAACGTCAGCAGGCAATCTAATTGGTTTATCTG
AAATTCGAAAGTTGTTTTGAAACATGTTTATTAAAAAGAAGACATTGCAA
TGCAACGGTAAACAAAAAATCGTTAAAAGGGAAACCCCAAAAAAGCAAGG
ACAAAACTCGAATAAAACAAAACCGAGTATTTTCAGATAAAAAGAGTTAT
ACTTATATTTTTCAATATGATTCATCTCACAAGGGTTTATTTTAAAGCTG
TGGTAATTCTTGTCTCATAAAATGATGAATCCGTTCACTTTCTAAAATGT
ATTTTTCTGATAAGCTCGATTTTGTTTTTTGGGTTTTCCAAAGAGAAGAA
CTGACATTTGTAGTTATTCCCTTTAATCCAATAATTTTTTTAAGTTTTGA
TATTACTTTTGCAATCAAGTTTCAATTAATCCAATAATTTTTTATGGTTT
TCACTAGGATACTAGCTTCACATTTTCAAGTGACGAAGACGAGAACGATG
AAAATGTGCCGGTAAATTCTTGTTATTTTCTTTGTATGGTATAATTTGAC
ACAGAGTTGAACACTTAGCTGCACGAATTTTGTCATCTACTTGACAAAAA
CGCAATGTTTGGCAATAAAAAATGTTATTTCTCATAAACGGGCTTAAATT
GGATAGGGTTTGTTAACGAATTATTTATACCAGCTATCTCTGGCATTACC
TAGCATTAAAAAGCATAGACAAATCCTTGAGCATATTCGAGACTGAAATT
CAAAAGATTCTTAACAATTTTAGGCCAAGGTTGTCGGCCCCTAATTTTTC
TCACAAGTTAAAAGCTTCTCCTTCCCCTTACAGGACGTTCAAAGAACACC
ACAGGTATTTTTTAATTATTTTGCCTGACTACAGTAAGCCAATTCTCTCA
GAAATATGTGAAAACTTTGATGATTTAAAGAATAATTAAAATTAATAGTT
TTTACAGTTTTATTTCAAAAGTACGTAAATGGCCTTGAATACCTCCTTCT
GTTTTTTTCTACATTCAGGGTTAAAGTTTTATGGAAGTAAATTTGTTTTT
GTACATTTAGGTTGCGTCAGCAGCTATGAACAAATTACCTGGTGGATCAC
CTGACATAATCAATAAATTCAAAAGCCGGCTTCAATCAAAGGAGCTATTT
CAAAAGAAGACGTCTGCTTCTTCGTGTGATGAATGTGAAAAAAAAACGCA
AGAAATAAATAAATTGAGAGGTATCTTATACCACTATGACTTTATTTTAA
ACCATTGTATTTTGCTTGTATTTCTCATTTGCATAATACTACATTTTGAT
ATAATTTGGTCTGAGTAAGTTAAAATTACAGTTGTTGGGGATAAAAATAC
TTTACTTTATTATAATTCGTTCTAGGCTTACTTGCTCAAATCCATGGACT
GGCTGGCAACCACGACAGACCATCCCAAAACAGCCCTACAGCGAGCCCTA
TTCCATTTAATAATAGCTTGGTATCAACTTCAAATATTACTCCACAGGTA
CTATTTTACTAACTCTTTTGTCCCTAATTGTAGGGGGTGAGTTTTTTGGA
AGAAATTACTTAAAATGACCCCCCGTCATAATAAATTGATATTGGAGTGA
TTTTAGTGATTTTCCCTAGGAAAATGAAGGTTTTGACACTTTTTGGGCAA
AAAGTCATAAAATGGGGGGTCATAATTAAATGCTATTGGGGGTGAAAAAT
TTCGAAAATTGCAAAATGACCCCCCTCCTACAATTAGGGACAAAAGAATA
ATGATAGGATGAGAATCCCATTCACGTTTGTTCATTTTATGCATTGTTGA
TGTGTTGATGTTTTGTTGTTTTTCTTCAACGTTCATTATTGTTAAACGCT
TTGGTGAAACATACACTGAACATCTTCATTCCATTTTTATTAATACATAT
TATATTTTAGTATGATTGAACTTTTTCTGCCTTATTTACAGAAGCGACAC
ATTTTTCTCTGGAAGAAAATAGCGGAGTGACTTTAAAAAAGCAGTCATGT
TTATTAAGTGGCGACTATTTTTTTTTCTGGGGTGCGCAGTCTCAAACAAA
CTGTTCGTATTTTTTATTTCAGCGAGCCATCAGCTTGATCCCGCTCGTTA
AAGAGGAAACTTTGTTAGTGCCAAAGCTGGAATTCTTCAACATGAAGAGT
GATGCACTGACGAAGCATAATCCAGGCAAATACCTCCTGAATGAGTTGAT
CAAGCTTGTTTTTACGGTCGATGAACTAGCCAGCCACAAAGCTACTCACA
GTCGCTCAGTAAAAAGCCAGCGTCCTGGTTTAGATGAAACTAAATGCAAT
ACTATACGAGGTTTGGAACGTTTTGTATTCATTTTCTCTTTTCCTGAGAT
TAGAAAATCTGTATGGGGCCGTCCATATAGTACGTACGCAAAGATTTTCC
AAAAATTGGATACCCCTCCCCCCCTTGTACGCAGAGAACAATAGAGAGGA
TGTCATTTAAACAATAGATGTACGCTTTTGCTAACCCCCCCTCTCCCCCC
TTCACTGCGTACGTACTATATGGATGGCCCCTATTCAACACTATATTATT
AACAATGAAATAAAACAATATAATTATTTCAGGTACTCTTTTTTTGTGGC
CATGTTAAAAAGGAAACTTAATTTCACCCCCTACAATTATGCACACAAAA
GTAGGAAATTTAAGCCGTTACAAAATACGGTTGACGTACGCAAGCTAGGA
AGGAAAACATCAGGCGAATCAAGCACGCTCCGCTATGATTTTTAGCCCGC
GCGGGTGAATATATTTGTCCGCCCGTAGACCTCATACGTCAAGTACAAGA
TCGCAGTGTAGCTCACACAACCCTTTCTCTACGTGTATATACTTAATTTT
TTTTATTTCTACAGCCTTTATCAATAAGTTCACTGGAGAGAATTGTCCAA
CAAAGCCACTGTCGTCGGAAGAAATGAGAAAAGTTTTTGAGTCTCAAATC
GGTGCGGCAAGGAAGAAGAAAAAAAATTCGCTTGTCCCATATGTTCCTAG
TTCCGAATAAATTGTAAATTTGTTTAATTTGTAATTAACAATAATTTCGC
AAGATTTCCTCTTGCATTAATCTCGGCTGTATCATGGTTATTTCTTGGTT
ATTTCCCTTGTTTTGAACGGCATTTTCAGGTCTTTTGCGCATTAGCGTTA
GTGGGTAAAATTCTCGTTAACGACCG

Coding sequence (CDS) from alignment at scaffold_433:8394..17469-

>TCONS_00065190 ID=TCONS_00065190|Name=TCONS_00065190|organism=Clytia hemisphaerica|type=CDS|length=1824bp|location=Sequence derived from alignment at scaffold_433:8394..17469- (Clytia hemisphaerica)
ATGTACTCCGTTCTTGTTTGGACATTAAAAGGTAATGAAGAGCTAAAGCC
TGCCTTGGTGGAGGTAATGAAGTCCAATGATATTGTATCCATCAACGGCA
AAGTTTTTTACAAACATCAGGGGTGTCAGTATGAAGGAAGAGAAGAATCT
TACTTTGAAACTCGACAGCAAGCGTTAAAGCGAGCTGAAGTTGTTAAGGG
TATTGAAAGCTTAAAATGTGATAGCCGGCCGAAACGTCGATTAATACCAA
AACGATTTCTAGAAGAAGGAGAAGAAGAAGAAGCAGAAGAACAACAAGAA
GAAGAGCTGCAAAATGCTGTTGTTTTATGTGAAATTGATGTGACCACCCC
TCAAAAGAAAAAAAAGAAACGAATTGCAAACACTCAGAAAGCTAAAAAAC
AAACACAGAAAGCATCAAAACCCTCAAAGAAGGTTGATCAAAATCAGGAT
GGTTTGTCTCGTTTGGTTAAAACAATACATCCAGAAAAAGTAGTAGAAGA
ATGTACATTCTCAGATATCCTGAAAACTATCAATCCAAGCATTAATGATT
TGTCCACTTCGACAGGGGTAACAAACCGTAATACATCCACTTTGACAGGG
GCAACGAACCATGCTACATCCCCTTCGACAGGGGGAACGAACCATGCTAC
ATCCCCTTCGACAGGGGCAACGAACCGTGATACATCCACTCCGACAGGGG
CAATGAACCGTGATACATCCACTTCGACAGGGGCTATGAACTATAATACT
TCCACTTTAACAGGGGCAATGAGTCGTAATGAAAAACATAATGATTTGTC
CACCTCGATAGGGGCAACGAACCGTGATTCATCCACTTCAACAGGGGCAA
CGAACCATGATTCATCCACTTCGACAGGGGCAACGAACCATGATTCATCC
ACTTCGACAGGGGCGATGAACCGTGATACATCCACTTCGACAGGGGCAAT
GAACTATAATACTTCCACTTTGACAGGGGCAATGCGTCGTAATGAAAAAC
AGAGAGATACATCCACCTTGACAGGGGCAATGAGCCATGATACGTCCACC
TGGACAGGGGCAATGAGCCATAATGAAAAACAGGATACTAGCTTCACATT
TTCAAGTGACGAAGACGAGAACGATGAAAATGTGCCGGACGTTCAAAGAA
CACCACAGGTTGCGTCAGCAGCTATGAACAAATTACCTGGTGGATCACCT
GACATAATCAATAAATTCAAAAGCCGGCTTCAATCAAAGGAGCTATTTCA
AAAGAAGACGTCTGCTTCTTCGTGTGATGAATGTGAAAAAAAAACGCAAG
AAATAAATAAATTGAGAGGCTTACTTGCTCAAATCCATGGACTGGCTGGC
AACCACGACAGACCATCCCAAAACAGCCCTACAGCGAGCCCTATTCCATT
TAATAATAGCTTGGTATCAACTTCAAATATTACTCCACAGCGAGCCATCA
GCTTGATCCCGCTCGTTAAAGAGGAAACTTTGTTAGTGCCAAAGCTGGAA
TTCTTCAACATGAAGAGTGATGCACTGACGAAGCATAATCCAGGCAAATA
CCTCCTGAATGAGTTGATCAAGCTTGTTTTTACGGTCGATGAACTAGCCA
GCCACAAAGCTACTCACAGTCGCTCAGTAAAAAGCCAGCGTCCTGGTTTA
GATGAAACTAAATGCAATACTATACGAGCCTTTATCAATAAGTTCACTGG
AGAGAATTGTCCAACAAAGCCACTGTCGTCGGAAGAAATGAGAAAAGTTT
TTGAGTCTCAAATCGGTGCGGCAAGGAAGAAGAAAAAAAATTCGCTTGTC
CCATATGTTCCTAGTTCCGAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040869XLOC_040869Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065190-exon-scaffold_433-1575043694:17363..17469TCONS_00065190-exon-scaffold_433-1575043694:17363..17469Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1575043694:16093..16250TCONS_00065190-exon-scaffold_433-1575043694:16093..16250Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1575043694:15646..15830TCONS_00065190-exon-scaffold_433-1575043694:15646..15830Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1575043694:14791..14859TCONS_00065190-exon-scaffold_433-1575043694:14791..14859Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1575043694:14413..14490TCONS_00065190-exon-scaffold_433-1575043694:14413..14490Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1575043694:14121..14174TCONS_00065190-exon-scaffold_433-1575043694:14121..14174Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1575043694:13651..13691TCONS_00065190-exon-scaffold_433-1575043694:13651..13691Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1575043694:13413..13617TCONS_00065190-exon-scaffold_433-1575043694:13413..13617Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1575043694:12607..12819TCONS_00065190-exon-scaffold_433-1575043694:12607..12819Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1575043694:11867..11947TCONS_00065190-exon-scaffold_433-1575043694:11867..11947Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1575043694:11059..11112TCONS_00065190-exon-scaffold_433-1575043694:11059..11112Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1575043694:10716..10736TCONS_00065190-exon-scaffold_433-1575043694:10716..10736Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1575043694:10350..10509TCONS_00065190-exon-scaffold_433-1575043694:10350..10509Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1575043694:10073..10194TCONS_00065190-exon-scaffold_433-1575043694:10073..10194Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1575043694:9260..9497TCONS_00065190-exon-scaffold_433-1575043694:9260..9497Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1575043694:8394..8705TCONS_00065190-exon-scaffold_433-1575043694:8394..8705Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1510915933:17363..17469TCONS_00065190-exon-scaffold_433-1510915933:17363..17469Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1510915933:16093..16250TCONS_00065190-exon-scaffold_433-1510915933:16093..16250Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1510915933:15646..15830TCONS_00065190-exon-scaffold_433-1510915933:15646..15830Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1510915933:14791..14859TCONS_00065190-exon-scaffold_433-1510915933:14791..14859Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1510915933:14413..14490TCONS_00065190-exon-scaffold_433-1510915933:14413..14490Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1510915933:14121..14174TCONS_00065190-exon-scaffold_433-1510915933:14121..14174Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1510915933:13651..13691TCONS_00065190-exon-scaffold_433-1510915933:13651..13691Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1510915933:13413..13617TCONS_00065190-exon-scaffold_433-1510915933:13413..13617Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1510915933:12607..12819TCONS_00065190-exon-scaffold_433-1510915933:12607..12819Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1510915933:11867..11947TCONS_00065190-exon-scaffold_433-1510915933:11867..11947Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1510915933:11059..11112TCONS_00065190-exon-scaffold_433-1510915933:11059..11112Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1510915933:10716..10736TCONS_00065190-exon-scaffold_433-1510915933:10716..10736Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1510915933:10350..10509TCONS_00065190-exon-scaffold_433-1510915933:10350..10509Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1510915933:10073..10194TCONS_00065190-exon-scaffold_433-1510915933:10073..10194Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1510915933:9260..9497TCONS_00065190-exon-scaffold_433-1510915933:9260..9497Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1510915933:8394..8705TCONS_00065190-exon-scaffold_433-1510915933:8394..8705Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1491911889:17363..17469TCONS_00065190-exon-scaffold_433-1491911889:17363..17469Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1491911889:16093..16250TCONS_00065190-exon-scaffold_433-1491911889:16093..16250Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1491911889:15646..15830TCONS_00065190-exon-scaffold_433-1491911889:15646..15830Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1491911889:14791..14859TCONS_00065190-exon-scaffold_433-1491911889:14791..14859Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1491911889:14413..14490TCONS_00065190-exon-scaffold_433-1491911889:14413..14490Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1491911889:14121..14174TCONS_00065190-exon-scaffold_433-1491911889:14121..14174Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1491911889:13651..13691TCONS_00065190-exon-scaffold_433-1491911889:13651..13691Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1491911889:13413..13617TCONS_00065190-exon-scaffold_433-1491911889:13413..13617Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1491911889:12607..12819TCONS_00065190-exon-scaffold_433-1491911889:12607..12819Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1491911889:11867..11947TCONS_00065190-exon-scaffold_433-1491911889:11867..11947Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1491911889:11059..11112TCONS_00065190-exon-scaffold_433-1491911889:11059..11112Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1491911889:10716..10736TCONS_00065190-exon-scaffold_433-1491911889:10716..10736Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1491911889:10350..10509TCONS_00065190-exon-scaffold_433-1491911889:10350..10509Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1491911889:10073..10194TCONS_00065190-exon-scaffold_433-1491911889:10073..10194Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1491911889:9260..9497TCONS_00065190-exon-scaffold_433-1491911889:9260..9497Clytia hemisphaericaexon
TCONS_00065190-exon-scaffold_433-1491911889:8394..8705TCONS_00065190-exon-scaffold_433-1491911889:8394..8705Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065190-proteinTCONS_00065190-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_433supercontigscaffold_433:8394..17469 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	6.16014e-09	0	0.229812	0.250077	1.05966	0	6.03384e-05	0.47865	9.27144e-07	1.19673	6.68749e-08	0.102925	0.51734	0.187798	0	1.21121	0	0	0.0288903	0.23016	0	0.658079	1.0202	1.61462	1.79649	1.20663e-07	0	0	0.422386
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065190 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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