|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065301 ID=TCONS_00065301|Name=TCONS_00065301|organism=Clytia hemisphaerica|type=transcript|length=2862bp tcgttttgacACACCGCCATTATGGTTTATTCCATGTGCATGTGCTTAAC TAAGTGTAAACAACCACTGACTCcaggaaataaaaaataaaaagctgaAC TGAAAGTAAATATCATGGATCTCTTTAGGATCGAAAGATTTGGGGCTGAG TGTTTGGATGAGGAAGATGTGAAAGCAAAGGAGATGCATCTTCATAAGTT GATTGAGCAGCgaagaaaaaaacgaaagtCAAATATCTCTGAAGAAGATG AaacaaaaacactcaaaaagaaaaagaaaaagaaacttgCTGACGATACT GAAGAATGCAAACAAGAGATTgttgtgaaagaaaaaaagttgaaaaagaa gaagaaaaaacaaagtGATGACGAAGAGGATGAATCAGAGGTCGAAAAAC AAAagctggaaaagaaaaagaaaagcaaaaccaAAGTTGACAAGAGTATT GAAAATGCACTTGAGAATAGTGAAGATGAATCTAGTATTTTGAGAGAAGA TTCGACTGATAAGAGATCAAAAAAGAAAGAGAACAGCCTTGAAGGAGTTG AAATAGAAGAAATTAATGAACAAATTGAagaggaaaatgaagaaaaacat aACAATGATGACTTACAACAAGAACCAGAAAAAGAACACTCATTTCCCAT ACTTGGGAAACAAGTACACAGATCTAAAGGACCGGTTAAAAGGAATTTAC CACGTTGGCTTGCAGAACCTAAAATCATAAGTTCACGAACTGATACACAT AATGAACACAAAATTGAAGAACTTGACTTTCTGTCATGTAACACTATTAA AAATCTTGAGAGAATGGGCGTAAAACATCTTTTCCCCGTGCAATCACATG TGGTACCTACTGTCATGGACATGTTTAAAAATAAGAAACCATGTTTCCCA TGCAGAGATATTTGCGTTCAAAGTCCAACGGGAAGTGGGAAAACGCTTAG TTATGTTATGCCAGTTATTGAAGCAATGTCTAAAAACATTATTCGAGATT TACAATGTTTGGTTGTTCTCCCTACAAAAGATTTGGCAGCCCAAGTGAAG GTGACTTTTGATCAATGTGTTGTTGGGACTAATTTGAAAGTTGGCCTTGT TGCTGGTGTGAAATCATTTGCTAAAGAACAAGAAAGTATCATTACTGCAA GACCAACAGGTTTTCACACTTTGATCGACATCCTGGTATGTTCTCCAGGT CGGCTTGTGGATCATTTGAAGTTGACACCTGGTTTCAGCTTGGCTCACCT AAAGTATATGGTCATTGATGAGGCTGATCGACTGCTTTCTGATAGTTATG CAAACTGGCTGGCTCTTTCAATGAAATCTGTACAAGCTGAttcCAGCCAC AAGATATTTCCATTGACACCAGCCAAATTCAGTAAACCATTTCAACACGT TCAAAAATTCTTGTTTTCTGCTACATTGACGGAAAATCCTGAAAAGATTG CAACATTGGAATTATTTAACCCTATACTGTTCCTTTCGCAATCTTCTCGA AAGAAAAAGGATGATGACCAGGATGTAGAAGGGGAAGAACAACCACCCGA GGACCAAGAAGTGAATTTGAAGACGTATGTGGTACCTGATCAACTGAAGG AACGAATGATGGTCGTTGAAGCTCACCAGAAACCGTTAGCGTTACTTTAC CTCATGAAGAACGAAGATCATCAATGTGCACTGTGCTTCACTAACTCCAT TGAATCTACTCATAGGTTGTTTTTATTGCTTCAACGTTTCAAGGATATCA AAGTTGCGGAATTTTCATCGAAGCTGAATGAAACTCAACGCAAAGGCATC TTACGAGATTTTCGTCAACAAAAAGTGAATTTGTTGATCGCTACCGATTC CATGTCACGTGGTATGGACATTCGAAATGTCGACCTAGTTGTCAACTACG ACGCACCAAACAATGCCAAAACATATGTACACCGAGTTGGCCGGACAGCC AGAGGAGGAGAAGAAGGTGAGGCAGTAACGATATTACAAGGAAAGGAGGT GTttcatttcaagaaaatgcatcaATCGTTAGACACTGCGCGTCCCATAA AGAAAATTCGAATCAACGAACAGGCTTTCGAGGAATTTGAAGACGATTAC GAACTAGCGTTACGAGATTTGAAAACCAAAGTACAAAgcgagaaaaagaa aatctaatatgaaatgatgattttgttgACGTTATGTGCCGGCTGAGTGG TCTAATTTGTCTTCGTTTCTTTGTTGTTTCGTGAAgatttgcttttattt ttatatatttttgacaAATAAGAGCTTAAAggggaactaaacattttttg aggTCATGCTTTTTTTGTATCTAAGTACTAGACGATATAGTATAACTTCA AAAAATATGACTTCCATTCTCAATCTCTTTCGTTGCtttataaaaagatt ttctgtaaacaaaaaacagttttttcagaCGTCATTCCTTGTAAGTATTA GATGGGGCCCCGTCTACTCACGATTTTTTCTGAACTCGATAGTAGACGGG TAGTTTTGGACAAATATTTCTACAATTTCTTGTAGAAACGCTTCTGATTG GCCGATTATGTCTATTGTTCTCCTGaaaaatttatgcaacaaaattcTGA TGGGCCAGTTTtcaaacggtttttttctggtggcaaattcaaaatctcca atTCTACCATACTAATTTTTATCTCATGTGAGCTTTGTGAAATGGAGTAA AAATTAGTAGGGGTCCAGACTATGTAAGTATGTGATGTGATTTaggtatt tttttgaaatattaaaaaaaatttctcctttAAGAAATAATATAGTTTTG TATCATCTTAATATCTAGTATATCTATATGatatgaaatataattttgtc ATGTTTGACCAA Run BLAST on NCBI protein sequence of TCONS_00065301-protein >TCONS_00065301-protein ID=TCONS_00065301-protein|Name=TCONS_00065301-protein|organism=Clytia hemisphaerica|type=polypeptide|length=680bp
MDLFRIERFGAECLDEEDVKAKEMHLHKLIEQRRKKRKSNISEEDETKTL KKKKKKKLADDTEECKQEIVVKEKKLKKKKKKQSDDEEDESEVEKQKLEK KKKSKTKVDKSIENALENSEDESSILREDSTDKRSKKKENSLEGVEIEEI NEQIEEENEEKHNNDDLQQEPEKEHSFPILGKQVHRSKGPVKRNLPRWLA EPKIISSRTDTHNEHKIEELDFLSCNTIKNLERMGVKHLFPVQSHVVPTV MDMFKNKKPCFPCRDICVQSPTGSGKTLSYVMPVIEAMSKNIIRDLQCLV VLPTKDLAAQVKVTFDQCVVGTNLKVGLVAGVKSFAKEQESIITARPTGF HTLIDILVCSPGRLVDHLKLTPGFSLAHLKYMVIDEADRLLSDSYANWLA LSMKSVQADSSHKIFPLTPAKFSKPFQHVQKFLFSATLTENPEKIATLEL FNPILFLSQSSRKKKDDDQDVEGEEQPPEDQEVNLKTYVVPDQLKERMMV VEAHQKPLALLYLMKNEDHQCALCFTNSIESTHRLFLLLQRFKDIKVAEF SSKLNETQRKGILRDFRQQKVNLLIATDSMSRGMDIRNVDLVVNYDAPNN AKTYVHRVGRTARGGEEGEAVTILQGKEVFHFKKMHQSLDTARPIKKIRI NEQAFEEFEDDYELALRDLKTKVQSEKKKI Run BLAST on NCBI transcript from alignment at scaffold_435:425442..437517- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065301 ID=TCONS_00065301|Name=TCONS_00065301|organism=Clytia hemisphaerica|type=transcript|length=12076bp|location=Sequence derived from alignment at scaffold_435:425442..437517- (Clytia hemisphaerica) TCGTTTTGACACACCGCCATTATGGTTTATTCCATGTGCATGTGCTTAAC
TAAGTGTAAACAACCACTGACTCCAGGAAATAAAAAATAAAAAGCTGAAC
TGAAAGTAAATATCATGGATCTCTTTAGGATCGAAAGATTTGGGGCTGAG
TGTTTGGATGTAAGTTTATTTTATTTTATTTGTTTTTCAGGGCTATTGAT
ATTGTCTTGGCACTTGGGGAGGCCATTCCAGAATTTGTCTGTATAACGGT
GCTGACTCCTTTGTACGGGTGAAAGCAGATTTTTTGTTATTTAATCTGTA
CAGGTGAAAATCATTTATATCGGTTAGGGTCAGGATCAGTTAGGGTCAGG
ATCAGTTAGGGTCAGGATCAGTTAGGGTCAGGATCAGTACGACGACGGTA
AGTTGGTCTAATATCGACATCCCTCGTCTAATACACCGTTTAACAGTCTT
GCCATCTCCACCGTAGAGGCGGTAGGTAAAAATGCTCACTTTAGTACTGT
GGAAGGTTAGAGAAATGTAAACATTGTCATTTTTTTCCTTTTCTTTAAAG
AGAATGTTTTAGATGTTTGAACATGATCACTGCTGTTATGGTGTCCATTC
CAGCCAAGCCATATTTTATCATTCTACAGAAATCCCCGCTTGAAAAATCA
AAACATTGATACGTGGTCGAGTTTACTATAAACTTTGCCGAATTAAAACA
CGGAAAAATATCATANACGCGAAAATATCATATGACATATGACCACGGCT
TCCGTTTAGTTCGATCATGATTCTGATCGCGTGATATAGCTTGATGTTTT
GACTTTTTTAAACCAATGAAATCATTTGTTTATACCGCACTAAAGGCCTT
TCTAGATTACCGCTCAAAAAAAAACGGGGGTCAACATGAACTTTAAAGCC
TGCTGCGGGAAAGGGAAATGGTTTTGAAGAACCAAACATATACAGAAAGG
TTTTAATATTATCCAAATATCAGTATAGACCTAACTCTTCATACAAAAAT
TACGGGAAACGCATATTTGGACTTTGTACCCTATGCTGCACTCAAGCACT
TGAGCCAAAATCCCGCAAAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTGGTCTAGCGGTAGTGTATGGAGCTTCTGAACCGAAAGT
ACTTTTCATGTGCGAGTTTGAATCCCACCCGGAACTCAACTTTGGAAAAT
TTCAAAATTTCAAAGTTGAACTCTGAAATTGACTAAGTCCAACTTACAAA
CATCCTAAAGGTTCAGAAACTCCAGAAAACTTCAGATCAAAGACAGAGAA
ATACAAGATCTACTCTCACCCGTTCAAAGAAGCCACGACCGTCTGTAACA
GGGGGCGGACGACACAGGATTTTTGAGGGCAAAAGTTTTCACCAAAATTC
AGAATTTCCAAGGCGAGAGAAGAAAATGTATGAATTTCCAAGCCAATTGA
ANAGATTTTTTGTTTTTGTCAGTGCTCGCTCGGCAGCCATTTTGAATTTT
TCTTTTTCGACGTCTGTACTCGGCAATTTCGTGACCTCTACAGAATCGAC
AATTTTGCCTGAGGGGAACAGCAGTGTGATATTAATGACAATTTTATGTA
TCTCTCCTGAAAATTTCACAAAAATTCATCTAGAGGAAAAGAAGTTATGA
TTAAACTGGATTAAAAGGAATTCTTTACCTACCATTNCTGTGACCGGTAA
TTACTCGTCATTTTTAAGCTATAATATATGTGTTTTTTTTCCCGTGAAAT
TTTGATCGTTTCATTATTAGTGCTTACTGATTGAGTAATCACCGGCCAAC
TTGAAATTCCTTATTTGCAGCACTGGATTGAATTAAAAACAGTAAAAAAG
AGTGAAATTTCCGACACAATTTGCGAAAGTACACAGATTTTCATCGGAAT
TTCCGACCACCACTGGAAAAAAAATTATTTCCAAGGCTAGAAAAAAATTT
AAAAAATGTATTTTTTGGTATTGACCAACTTTTTTCACTAATCTTCCCTG
GAAATCTGGGGTAGAACCCCTTGGAAGTTTAGTGAAAAGGGGTTGGAAAA
ACAACTCTTGATGTCATCTTATTGAGGAGAGAACCCTGAAAACCTTTAAT
TGACCCCTTTGAAAATCTGAAAATCTGAAAAATGAACAATAACTCCTTGG
AAAATCTGAGATTTAACTCCCTGGAAAGGTTTGTCAATACCCCTATGGTT
TAAAAATGGNTTACCATTTTTTACCGGGGAGAGTGAAGTTTCCCGTGGTT
GCCAAAATCAAAACAATAGAAAATTGTTCATATGCGTGCGCAGTCGACAC
TGTTAAACGGTGTATTCCGACTACCGACACCCTTCTTTAGAGAAAGGAAT
AATATGAAAGCTTGAATCACTGATTGAAAAAGTGTTATTCCTCTCTGACC
ACTAAGCAAAGAAAAATAGTTTCAACCTTTCTATAAATTTCAGCTGATAA
AAAGGGTGCCGGAATTAGAAGAGCAGAGGGGTGTCAACATTAGACCAGAG
ACCAAGTTACGGTAAGTGTCAGCAGGGTTGGATTTTGGAGAGTCAAAATA
GGGTTGGGAGTAGCATTTTGGTAGGTAAATATAGGACTGTAGGCCCTGGT
AAGGATACCCCTAGGGTTGGGGCTAACCTTGGTATGTCAATATATATAGG
TCTGTAAAATACACACTATAATAATTAGATTGTGAATNGATGCATCGTCT
CCTCTATTTTGTACCGTAGATTGGTCTATTATCCACACCCCTCCCTTAAT
TTCGACACCGGATCTGCAAAATATTCAAAGCAAACCTTTAATGAAATTCT
TAGTATTACTCTTTATCAAACAAGTTCTTCCATCTCATTAGAAATTCAGT
AAACATTGTAAAATTCTTTCAATAAAAGTAATTTTACACAACAACGCATG
CAAACTGTCTTGTGTCAATCATTAAAATTTTACTACTTTATTACTACACT
TCAAATCATGTGATCATAATAATTTGTGCGCTTAGGACCTGACCTGACCT
GGTTTCTCCCCGTCCTTATTATTTATCGTGAGCACATGCTCTAGGCACTA
AGAAGTCATAGGTACATACAACTCCCTATTTTTCATTTCAATCGCCGAGA
CATGACAGGGCAGAGTTGTTGGCGTTATGGTGGTCTTATTAAATTCAAAA
GGAACCCAGGTTCTTTTTATCAATTTTGGTTCACAGTAAAAGGGCCGTTT
AGTTTGCGCATTAAAAGCCCTTTTAGAATGTCAAAGATGGTATTGTTGAT
GCTCTCTAACTTTATTTTTAAGGGGAATTCGTTTGCTTAGACAGGCACAT
GACTTTGTCTCCACTCAAACATAAAAATAACATTTAACTGTATCATCAAT
AAAACCATCTTCATCTTTTCAAAGTTTGTTCTATGGCCCATAGCCCCATG
TAATGATTTATTTTGCTTACTCGTCTGACATCTCCATAAGATCTTGGTTC
TCATCTTCTTTTCTTCAAAACATTATTCCAATTACACCTTCTAAGCTCAG
CTCCTAGATATGATCAAGCAATTCCTCTCTACTCATTCTCAAGCAGCCCA
ATCTGCTCCAAGAGCACTTTCTCAGCTCTTCCTCAAGCAGCATCAACTTA
AATTTCCTTTTCACAACTGTTCACTTTGGATCCCCCTCCCTTGTTTACCC
TGTTTGTGGTTTTATTTATCCCGTTTGTGGTTTTATTTACCCTGTTTGTT
GCTTTATTTACCCTGTTTGCTGTTTATATTCATTTTTTCAACAAAGCTAC
TACTGGTAATTAGATTGATATAGATTACTTGTCTGCTTTCAGAGTTTCGG
TACCATGGGATAGATCTTCCCATGCTACCGAAACCCTGGACAGTATTACT
GTACTAAAAAATTCCTTGCATGCCAAAAGTTGTTTTGATTCCTATATCTT
TGTGGAAAGCATGCTAATTAGTTTTCCAGTGATGAATACATCGTTTAAGT
TTTCTTTTCAAAAATGACACTTATCATTTCTCATATATCAACAATCTGTA
ATATGATGGGAAAATACAATTTACTGATTGATTAATTGATTGATTGATAA
CTTTGGTATGTATTTGTTTATGAATGATTTTTTGTTTCGAAGACCAGCCT
ACAGCTATGTCAAGATTTAAGGACGCATGTTGATAATACAATAAACTAAT
CTACGGTACTTTCCCATCTTCTATCCTGATTTTCTGACTTCTGACCGCAC
CTGATCTCAGACTTCGGTCTTCAGCTTATCACTTCCTTTTGTGTCTTGTG
TATTCCTTTTGTTTAAAAAAAAAAATTATTTTTTCTTTCTTTCAAAATGT
ATATTGGGTTTTTGTCATGGTTAGTCGCTAGTTTGTATTTTCTTCAGTTC
AAATAACTTCACTATATTTCTCAAGTGTTTCTAACTGTTGTGTAAGTATT
TTTCTGGAACTATTTCTAACAAAAATTCAAAACTTTTTTGTAGCACTTTA
AGTTTCATGCGTATGATCATCAACTACATACAAATGTTCTAACTTTCTAA
AATTCAAATTTTTACAAGTCGTAGGGTCGTAAAAAGTCATAAAATTATGA
TAAAAAATTGAAACAAAAACAAAATGCTATTCTCAAAGGTCCGTTAGTTA
TTTGACATTGTAATTTTTTAACGTGAACTTATTAATGTGTCAACATTTTG
GCAACAATTTCTGAGCGAAATCATAACTAGCCTATAGGCATAAGTGAGAA
TTTTTGAGCTGCTTGAACTGCTGAAAAGCTGATTGAACTGAAGATTTTCT
ATAACCAGTATAACCTGCTATTCAGCAGAATGTCAGATAACTTGTGCAAT
ATGCTGTCCACTTTAGATATTTGAAAGATAACAAATATGGAAAGGGAACC
CTGCTTTCCAATACTTTCTACTATATTTCCTGTCTTTAAGATGGAAGTGA
CAAAGAAAAAAATGCAAAAGTAGAAGAATTTCTACAATTACAGAATTAAT
AAATAGACCTATTTCAAAAACTTCTTTTTTTATTTTAACATTATTAATTT
TGTCTCCGTTGTTCTTTTTTTTCTAGGAGGAAGATGTGAAAGCAAAGGAG
ATGCATCTTCATAAGTTGATTGAGCAGCGAAGAAAAAAACGAAAGTCAAA
TATCTCTGAAGAAGATGAAACAAAAACACTCAAAAAGAAAAAGAAAAAGA
AACTTGCTGACGATACTGAAGAATGCAAACAAGAGATTGTTGTGAAAGAA
AAAAAGTTGAAAAAGAAGAAGAAAAAACAAAGTGATGACGAAGAGGATGA
ATCAGAGGTCGAAAAACAAAAGCTGGAAAAGAAAAAGAAAAGCAAAACCA
AAGTTGACAAGAGTATTGAAAATGCACTTGAGAATAGTGAAGATGAATCT
AGTATTTTGAGAGAAGATTCGACTGATAAGAGATCAAAAAAGAAAGAGAA
CAGCCTTGAAGGAGTTGAAATAGAAGAAATTAATGAACAAATTGAAGAGG
AAAATGAAGAAAAACATAACAATGATGACTTACAACAAGAACCAGAAAAA
GAACACTCATTTCCCATACTTGGGAAACAAGTACACAGATCTAAAGGACC
GGTTAAAAGGAATTTACCACGTTGGCTTGCAGAACCTAAAATCATAAGTT
CACGAACTGATACACATAATGAACACAAAATTGAAGAACTTGACTTTCTG
TCATGTAACACTATTAAAAATCTTGAGAGAATGGGCGTAAAACATCTTTT
CCCCGTGCAATCACATGTGGTACCTACTGTCATGGACATGTTTAAAAATA
AGAAACCATGTTTCCCATGCAGAGATATTTGCGTTCAAAGTCCAACGGGA
AGTGGGAAAACGCTTAGTTATGTTATGCCAGTTATTGAAGCAATGTCTAA
AAACATTATTCGAGATTTACAATGTTTGGTTGTTCTCCCTACAAAAGATT
TGGCAGCCCAAGTGAAGGTGACTTTTGATCAATGTGTTGTTGGGACTAAT
TTGAAAGTTGGCCTTGTTGCTGGTGTGAAATCATTTGCTAAAGAACAAGA
AAGTATCATTACTGCAAGGTGAGATTTCATTTCTGAGTTGAAGAATTTTT
TCAAACTTGATTTTACTTCTTTAATGAGAAATTGACCTACCAAATTAAGA
TAAATTATCCTGAGTGAGGATGCGTGTAAAAATCTTCATCGATTTATGTT
TAGAAACACTGTTGGCATAGAATATCCTCAGAATATTTCAGAAATTGAAG
GATAATAAAAGAAGTGTATTCATGCTTGTGAAATCTTCTTAAATTGCTTT
AAATTCTAGACCAACAGGTTTTCACACTTTGATCGACATCCTGGTATGTT
CTCCAGGTCGGCTTGTGGATCATTTGAAGTTGACACCTGGTTTCAGCTTG
GCTCACCTAAAGTATATGGTCATTGATGAGGCTGATCGACTGCTTTCTGA
TAGTTATGCAAACTGGCTGGCTCTTTCAATGAAATCTGTACAAGCTGAGT
GAGGATTCCTTCCTTTTCCTCCCCTTAGTAGGATNCAATGAAATCTGTAC
AAGCTGAGTGAGGATTCCTTCCTTTTTCTCCCCTTAGTAGGATCAAAATG
AATTATGTGGATCCAGTTCAAGTGTCATGAAAATTAGCCTCTTTCAGCTT
TAATTGAGCAGCTTCGCCCGACCTTACACCTGAACAATTAAAAATAAAAA
CAAGCAAATGACTTATTGTTCAAATTTCACATTCGAATGGATATTGTTTC
AAAACTCTGTTTACTCCTCACGTTCTATCTTTTGCTTTTGCTCTTCAAAA
GACCTAGGAAGCTTTTTATGTTATTTTCACTTTCATTATTTATTTATTTT
CAGTTCCAGCCACAAGATATTTCCATTGACACCAGCCAAATTCAGTAAAC
CATTTCAACACGTTCAAAAATTCTTGTTTTCTGCTACATTGACGGAAAAT
CCTGAAAAGATTGCAACATTGGAATTATTTAACCCTATACTGTTCCTTTC
GCAATCTTCTCGAAAGAAAAAGGATGATGACCAGGATGTAGAAGGGGAAG
AACAACCACCCGAGGACCAAGGTACTGCATGAGTGGAATTTTTAGTCTGA
TTCCTAGTTCATTATACTAGGCCTCTATATTCTATTCTATCCCTTTGATA
ATTCAACCGTCAAGTTCCTTTACTCGATTAATCCCCACAAATTTGCCCAA
TTCAATCTGGTTGTCTTTTAGTTTATACGTCAGTTATTATGAAGTAATCC
CAAGCATGTGTTTAATCAAGGAAATTGGTTTGATTGAATACTATTCTTGA
ATTTTCCGTATAATATTGTTTGGTTTACTGAGTTTATTGTCAGACCTTCA
CGGGAGACAGCAAGTACTTTTGTATGATACTTCTAATTCATGTACATTAA
TTGTTCTGGAAAGAATTTTGAGATTGGTTGACGACGTGTAGTTAACACTA
TTCACTTGTAGTTAGTGAGTTGTAAAATTTAATGCTCACCCTTCAGTACA
CTACCACTGAGCTTAATATAGCCTGGAGGTAGTTTCTCAATCTCGGCCAT
ACAAAATCTGTTGATCGGAGTTTTTTTGAAAGTGGTACCCCCCGGGGGGG
GGCACTGGGTTTGCGGACTGACGGTATGTGCGGGCCAAAAATTGGCTTTT
AAAATTGCACCCTTACAGTGCAGCAAAAATCAGTGAAAATCATACCCTTA
GAGTGCATTTTCCCCAAAATTTTCTATCCTTTTCGTGCAAAAAATGATCA
AAATTCTAGCATTTTTGGTCAAAATATCTAGATTTTTCAAAAATTTTCTG
AAATTTCTACCCTTACAGTGCATCTCTAGTATCGGTGTAAATGCATTTAG
CAATGGTACAATTAATGGCACCACTTTCAAAAAAAAAACTCTGATCAACG
ATTTTGTTTGCCAGAGATCGAGAAATATAAGGGGATATAAAAAGTTCAAA
TGTTGCATGAAATGTTGGACTGGTTTTCCCTGGCCCTAACCATTCACTGT
GAACACAGCCCCTTACAATAGGTTAACTTTATTTATTTTCGTATTTTTCA
GAAGTGAATTTGAAGACGTATGTGGTACCTGATCAACTGAAGGAACGAAT
GATGGTCGTTGAAGCTCACCAGAAACCGTTAGCGTTACTTTACCTCATGA
AGAACGAAGATCATCAATGTGCACTGTGCTTCACTAACTCCATTGAATCT
ACTCATAGGTAGGAGCAAATATTTTTAAATAGGAACTATTGAATTATCGC
ATTTTGGAAGTCTACCATGGAAAGTAATTCTCTGCAAATTGCAATTTGTA
CTAACAATTTGGGAAAAAAAACAACATTATTGAATACTCTCGGGTACCTA
ATAAACTGGGGGTTTGGGTTGAGTGGAAAAATCCTCAAAACTTAATAAGC
AGGAAAATGTGCTGGGTGAGAAATTTAAGGAGACTAATACAGCAGAATTA
GAAAAAAAGAGGGAACTTTCAAAAGCATCTTCCCAAAAATTAATTATAGA
GGGGACGCTTATTAAGTATCCGAGAGTAATGGTTCAACAATAACATCTGG
CTGAACTAGAATTGTTAAATTGTTAAAGGTTATCGTGGTCGGGAAGCTCA
GTCGGTAGAGCATTCTCCTTGAAATCCAACCCTTTTAAGTTAGAACCGCC
AGTGAATGAGAACATCCATTATTGGGGTAATCTGATCCAAGCTTTAAGTA
ACTGGGAGTCGAGAGAATGTGTGGCGCTCCACCTCAGCTTTCGATCTCAC
TGGTCTAGTGCAAATCACTCGTATGCCTAATTAATTTACTTATCGCAGCT
AGGATAGATATCTCTCCTCTATGAGGAATGAAATTACACCAGTCGCAACG
GGCGTGGAGGATATTCGCAAATACCTCAATAATTATACTTAAAATGTCTC
TTATTCTTACGAACTTCGTAATGTATGGTCCTTTTGTTTTGCAGGTTGTT
TTTATTGCTTCAACGTTTCAAGGATATCAAAGTTGCGGAATTTTCATCGA
AGCTGAATGAAACTCAACGCAAAGGCATCTTACGAGATTTTCGTCAACAA
AAAGTGAATTTGTTGATCGCTACCGATTCCATGTCACGTGGTATGGACAT
TCGAAATGTCGACCTAGTTGTCAACTACGACGCACCAAACAATGCCAAAA
CATATGTACACCGAGTTGGCCGGACAGCCAGAGGAGGAGAAGAAGGTTGG
TTGGCATAAAATACTAAATTTCTTTCTGTTTTGAAGGTTTTTTCTTTGTT
TTCCTCTGTTACTTCCAGGGATTAAAAGAATTAACAATAGTTGTCAAGCC
CAAGAACTTCCGAGGCCTTCCCGAGTCTTCAAATTATCGTTATCTACTGA
CGAAATGCTTGAGTATCATTGGATAGGATACCTTCGCATTTTCGTTTTTC
AAGTTAAATTGAAACTTGCTAAAATCTTCCTTTGTTGATTCTAGAGAGCT
AAGGCCAAAAGCTTTTCAACGGTGAAAATGTTTTCCCTGAAGCCCATCAG
GTTTGGAGAAATTAAGGGACTTGATGTTTCAAAAGTTCGTAAAATTAGAG
TACAGTGGAATCTCTTTTAACTCGAACTTTTACAACTCAAATGTCTCCTT
AACTCGAGCAAGTTTCATGGTCTCTTCAGTTTTCTCGTCACACTTCAGTG
AACAATGCCTTATAAACCTTACTCGATAACTCGAAAACTCCTTTAACTCG
AACAAATTTATGTTCCGCATGCGTGTTCGAGTTAAAGAAACTCCACTGTA
TTATCGATTTTAAATATTTATTCCCACTAGGTGAGGCAGTAACGATATTA
CAAGGAAAGGAGGTGTTTCATTTCAAGAAAATGCATCAATCGTTAGACAC
TGCGCGTCCCATAAAGAAAATTCGAATCAACGAACAGGCTTTCGAGGAAT
TTGAAGACGATTACGAACTAGCGTTACGAGATTTGAAAACCAAAGTACAA
AGCGAGAAAAAGAAAATCTAATATGAAATGATGATTTTGTTGACGTTATG
TGCCGGCTGAGTGGTCTAATTTGTCTTCGTTTCTTTGTTGTTTCGTGAAG
ATTTGCTTTTATTTTTATATATTTTTGACAAATAAGAGCTTAAAGGGGAA
CTAAACATTTTTTGAGGTCATGCTTTTTTTGTATCTAAGTACTAGACGAT
ATAGTATAACTTCAAAAAATATGACTTCCATTCTCAATCTCTTTCGTTGC
TTTATAAAAAGATTTTCTGTAAACAAAAAACAGTTTTTTCAGACGTCATT
CCTTGTAAGTATTAGATGGGGCCCCGTCTACTCACGATTTTTTCTGAACT
CGATAGTAGACGGGTAGTTTTGGACAAATATTTCTACAATTTCTTGTAGA
AACGCTTCTGATTGGCCGATTATGTCTATTGTTCTCCTGAAAAATTTATG
CAACAAAATTCTGATGGGCCAGTTTTCAAACGGTTTTTTTCTGGTGGCAA
ATTCAAAATCTCCAATTCTACCATACTAATTTTTATCTCATGTGAGCTTT
GTGAAATGGAGTAAAAATTAGTAGGGGTCCAGACTATGTAAGTATGTGAT
GTGATTTAGGTATTTTTTTGAAATATTAAAAAAAATTTCTCCTTTAAGAA
ATAATATAGTTTTGTATCATCTTAATATCTAGTATATCTATATGATATGA
AATATAATTTTGTCATGTTTGACCAA Coding sequence (CDS) from alignment at scaffold_435:425442..437517- >TCONS_00065301 ID=TCONS_00065301|Name=TCONS_00065301|organism=Clytia hemisphaerica|type=CDS|length=2043bp|location=Sequence derived from alignment at scaffold_435:425442..437517- (Clytia hemisphaerica) ATGGATCTCTTTAGGATCGAAAGATTTGGGGCTGAGTGTTTGGATGAGGA AGATGTGAAAGCAAAGGAGATGCATCTTCATAAGTTGATTGAGCAGCGAA GAAAAAAACGAAAGTCAAATATCTCTGAAGAAGATGAAACAAAAACACTC AAAAAGAAAAAGAAAAAGAAACTTGCTGACGATACTGAAGAATGCAAACA AGAGATTGTTGTGAAAGAAAAAAAGTTGAAAAAGAAGAAGAAAAAACAAA GTGATGACGAAGAGGATGAATCAGAGGTCGAAAAACAAAAGCTGGAAAAG AAAAAGAAAAGCAAAACCAAAGTTGACAAGAGTATTGAAAATGCACTTGA GAATAGTGAAGATGAATCTAGTATTTTGAGAGAAGATTCGACTGATAAGA GATCAAAAAAGAAAGAGAACAGCCTTGAAGGAGTTGAAATAGAAGAAATT AATGAACAAATTGAAGAGGAAAATGAAGAAAAACATAACAATGATGACTT ACAACAAGAACCAGAAAAAGAACACTCATTTCCCATACTTGGGAAACAAG TACACAGATCTAAAGGACCGGTTAAAAGGAATTTACCACGTTGGCTTGCA GAACCTAAAATCATAAGTTCACGAACTGATACACATAATGAACACAAAAT TGAAGAACTTGACTTTCTGTCATGTAACACTATTAAAAATCTTGAGAGAA TGGGCGTAAAACATCTTTTCCCCGTGCAATCACATGTGGTACCTACTGTC ATGGACATGTTTAAAAATAAGAAACCATGTTTCCCATGCAGAGATATTTG CGTTCAAAGTCCAACGGGAAGTGGGAAAACGCTTAGTTATGTTATGCCAG TTATTGAAGCAATGTCTAAAAACATTATTCGAGATTTACAATGTTTGGTT GTTCTCCCTACAAAAGATTTGGCAGCCCAAGTGAAGGTGACTTTTGATCA ATGTGTTGTTGGGACTAATTTGAAAGTTGGCCTTGTTGCTGGTGTGAAAT CATTTGCTAAAGAACAAGAAAGTATCATTACTGCAAGACCAACAGGTTTT CACACTTTGATCGACATCCTGGTATGTTCTCCAGGTCGGCTTGTGGATCA TTTGAAGTTGACACCTGGTTTCAGCTTGGCTCACCTAAAGTATATGGTCA TTGATGAGGCTGATCGACTGCTTTCTGATAGTTATGCAAACTGGCTGGCT CTTTCAATGAAATCTGTACAAGCTGATTCCAGCCACAAGATATTTCCATT GACACCAGCCAAATTCAGTAAACCATTTCAACACGTTCAAAAATTCTTGT TTTCTGCTACATTGACGGAAAATCCTGAAAAGATTGCAACATTGGAATTA TTTAACCCTATACTGTTCCTTTCGCAATCTTCTCGAAAGAAAAAGGATGA TGACCAGGATGTAGAAGGGGAAGAACAACCACCCGAGGACCAAGAAGTGA ATTTGAAGACGTATGTGGTACCTGATCAACTGAAGGAACGAATGATGGTC GTTGAAGCTCACCAGAAACCGTTAGCGTTACTTTACCTCATGAAGAACGA AGATCATCAATGTGCACTGTGCTTCACTAACTCCATTGAATCTACTCATA GGTTGTTTTTATTGCTTCAACGTTTCAAGGATATCAAAGTTGCGGAATTT TCATCGAAGCTGAATGAAACTCAACGCAAAGGCATCTTACGAGATTTTCG TCAACAAAAAGTGAATTTGTTGATCGCTACCGATTCCATGTCACGTGGTA TGGACATTCGAAATGTCGACCTAGTTGTCAACTACGACGCACCAAACAAT GCCAAAACATATGTACACCGAGTTGGCCGGACAGCCAGAGGAGGAGAAGA AGGTGAGGCAGTAACGATATTACAAGGAAAGGAGGTGTTTCATTTCAAGA AAATGCATCAATCGTTAGACACTGCGCGTCCCATAAAGAAAATTCGAATC AACGAACAGGCTTTCGAGGAATTTGAAGACGATTACGAACTAGCGTTACG AGATTTGAAAACCAAAGTACAAAGCGAGAAAAAGAAAATCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00065301-exon-scaffold_435-1575043694:437359..437517 | TCONS_00065301-exon-scaffold_435-1575043694:437359..437517 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1575043694:430050..431041 | TCONS_00065301-exon-scaffold_435-1575043694:430050..431041 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1575043694:429620..429808 | TCONS_00065301-exon-scaffold_435-1575043694:429620..429808 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1575043694:429047..429264 | TCONS_00065301-exon-scaffold_435-1575043694:429047..429264 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1575043694:427910..428066 | TCONS_00065301-exon-scaffold_435-1575043694:427910..428066 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1575043694:426923..427173 | TCONS_00065301-exon-scaffold_435-1575043694:426923..427173 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1575043694:425442..426337 | TCONS_00065301-exon-scaffold_435-1575043694:425442..426337 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1510915933:437359..437517 | TCONS_00065301-exon-scaffold_435-1510915933:437359..437517 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1510915933:430050..431041 | TCONS_00065301-exon-scaffold_435-1510915933:430050..431041 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1510915933:429620..429808 | TCONS_00065301-exon-scaffold_435-1510915933:429620..429808 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1510915933:429047..429264 | TCONS_00065301-exon-scaffold_435-1510915933:429047..429264 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1510915933:427910..428066 | TCONS_00065301-exon-scaffold_435-1510915933:427910..428066 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1510915933:426923..427173 | TCONS_00065301-exon-scaffold_435-1510915933:426923..427173 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1510915933:425442..426337 | TCONS_00065301-exon-scaffold_435-1510915933:425442..426337 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1491911889:437359..437517 | TCONS_00065301-exon-scaffold_435-1491911889:437359..437517 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1491911889:430050..431041 | TCONS_00065301-exon-scaffold_435-1491911889:430050..431041 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1491911889:429620..429808 | TCONS_00065301-exon-scaffold_435-1491911889:429620..429808 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1491911889:429047..429264 | TCONS_00065301-exon-scaffold_435-1491911889:429047..429264 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1491911889:427910..428066 | TCONS_00065301-exon-scaffold_435-1491911889:427910..428066 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1491911889:426923..427173 | TCONS_00065301-exon-scaffold_435-1491911889:426923..427173 | Clytia hemisphaerica | exon |
TCONS_00065301-exon-scaffold_435-1491911889:425442..426337 | TCONS_00065301-exon-scaffold_435-1491911889:425442..426337 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_435 | supercontig | scaffold_435:425442..437517 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0003676 | nucleic acid binding |
GO:0005524 | ATP binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
molecular_function |
GO:0005524 |
ATP binding |
molecular_function |
GO:0003676 |
nucleic acid binding |
Blast
BLAST of TCONS_00065301 vs. Swiss-Prot (Human)
Match: DDX51 (ATP-dependent RNA helicase DDX51 OS=Homo sapiens GN=DDX51 PE=1 SV=3) HSP 1 Score: 311.997 bits (798), Expect = 5.232e-93 Identity = 200/515 (38.83%), Postives = 292/515 (56.70%), Query Frame = 1
Query: 649 ILGKQVHRSKGPVKRNLPRWLAEPKIISSRTDTHNEHKIEELDFLSCNTIKNLERMGVKHLFPVQSHVVPTVMDM----FKNKKPCFPCRDICVQSPTGSGKTLSYVMPVIEAMSKNIIRDLQCLVVLPTKDLAAQVKVTFDQCVVGTNLKVGLVAGVKSFAKEQESIITARPTGFHTLIDILVCSPGRLVDHLKLTPGFSLAHLKYMVIDEADRLLSDSYANWL----ALSMKSVQADSSHKIF------PLTPAKFSKPFQHVQKFLFSATLTENPEKIATLELFNPILFLXXXXXXXXXXXXXVEGEEQPPEDQEVNLKTYVVPDQLKERMMVVEAHQKPLALLYLMKNEDHQCALCFTNSIESTHRLFLLLQRFKDIKVAEFSSKLNETQRKGILRDFRQQKVNLLIATDSMSRGMDIRNVDLVVNYDAPNNAKTYVHXXXXXXXXXXXXXXXXILQGKEVFHFKKMHQSLDTARPIKKIRINEQAFEEFEDDYELALRDLKTKVQSEKKK 2151
+LG R V+ LPRWLAEP + R T + IE++ + + K L G+ FPVQ+ V+P +++ F + + D+CV +PTGSGKTL++V+PV++A+ ++ ++ LVVLPTK+LA QV F+ T L+V LV G KS AKEQES++ G+ L DI+V +PGRLVDH+ TPGFSL L++++IDEADR++ + +WL A + +S + +T A P +QK LFSATLT+NPEK+ L L P LF + + G E D + + Y P L + KPL +L+L+ LCFTNS E++HRLFLL+Q F + VAEFSS+ QR+ IL+ F Q K+ LLI+TD+ +RG+D++ V+LVVNYDAP +TYVHRVGRTAR G+ G+A T+L + F +M A +++ ++ + + YE AL L+ V+ E+K+
Sbjct: 162 VLGGFGKRKAPKVQPFLPRWLAEPNCVR-RNVTEDLVPIEDIPDVHPDLQKQLRAHGISSYFPVQAAVIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKELAQQVSKVFNIYTDATPLRVSLVTGQKSLAKEQESLVQKTADGYRCLADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAAFQSEDPADPCALLQRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAH---------RGLED--TDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGGVDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAG-APELQRHELSSKLLQPLVPRYEEALSQLEESVKEERKQ 663
The following BLAST results are available for this feature:
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