TCONS_00065521 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065521
Unique NameTCONS_00065521
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2569

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065521 ID=TCONS_00065521|Name=TCONS_00065521|organism=Clytia hemisphaerica|type=transcript|length=2569bp
GCTAGAGAGGAGAAGTTTTTTaggattgaatgaaaaaaagacTTCCTATT
ACAGCAAAAAAGTGACTCTAAtgcaaaaatgttagaaaagtATTTGAAGA
CAATATGGTGAAACGTTTCGAGGGTTATAAATACGAGAAACTCTCAATAG
CAACAGAAGAACAAAATGGAGTTATAGATAAACAACCTAATGGTCAGAAT
CATACAGGTTTAAACTTTAGTCTCGAATCAGTTGATGAACTATTAcacga
aaacaaagaaaatagcaaagggTTGTGGAgcaatctttttgattttttaa
cttGTGGTGCGTGCTGTAGAGTGGAGGTTTACTACCCTCGATATGAACAT
TTTCAGAACTCAGTGACAAGCAAACAGTATGAAGAATTAAAGAACGCATT
CATTGCGTTTGATCGGAATTGCGATGGATTCATCGATTCTGAAGATCTTG
GATACGTCATGGGCAAACTTGGTCATGATCTGTCATCTAAAGAAGTCAAA
AAGGTTTTCAAAGATATCTGCAAACACAGTAATGGCAAGATGGATTTCAC
AGATTTCGTAGAAATGATGGCACAAGATAAATTAGTTCTAACCACAAGCG
AACAAGAGATCTTAGCAGCGTTCCAATTTCTTGATCAAAATCATGATGGA
TATATCACCATAGATGAGTTACTACAACGTTTCCATGGCTGCCTGTCCGA
TACGGAAGCATCCCGGTTAATGTGTGAAGCGGACGCTAATGGTGACGGAA
AGATCGATTTCAACGAATTCAAACACATGATGTTTAATCAAGAACGAAGC
ATCTCATTGGCTCAATCTGAAGTAGAATTATACTcatgagaaagaaagaa
atctcATCCTTCGAAAATTTCACTACTCAAAGAAAAATCGTCCAAATCCA
CATTTTTGCTGGTCATGTTTACCATGGCAACGAATTCATATCATTCGCGC
AAGGATTGACGACATCAATATGGTACCCACAATGCTGTTCGGTGTCATTA
GATGAAATACAGTACACCAGAGACAcaagaaaaacgaaaattagaacatt
tttttatagACATCAAAACTAATGAATATTGATAGGGAATAGTACAGAGA
TAACTTGACATAAAGCGCTTCATCCAATCAGGGGGAGTCCTGgaccttat
tttcaaatatgaCAATTTATAGTATTCTAGTACCGTTACTCGAGAGGGAG
ATTTTAACCACCACAAAAATGTACTTTTTCGGTCTTCCAGTTGTACCCAC
AACTTTTTGTGATATTCTTACTTTGAACAGAAAGATTTTGGTACTGTTAT
GGTGAAATTTACCCCTCTTAAGTAGCGGTACTAAATATTTTGGGAAGNAT
TGTTATGGTGAAATCCCTCCTAAGTAGCGGTGCTAAGTATTTTGGTAAAC
ATTATCTAATCGTCGTTGCCATTGATgcaaaaggtccaatctcaaaatta
gtgtcTGAGAAAACTCAGGTTTATTTTGCTTTGGAGGTTAGCCCTTTTTC
TTGTAAGGATCATATCTACACACTAATTATATTATACTAAGTCAGATTAG
ACCTTTTGCCTTGATGACAGCGctttcttgatattcatgacgtaatcttt
tgtacggaaacacccgaaaaacacCGGGCGTTTGCTATCAGTTTTGAATT
TATATAACTAAACTGGTGGTAAACGCCCGgtgtttttcgggtgtttccgt
ataaaattTTACGTCGTGAATATCAAGAATAATGTAAGGCGTCCTTGATA
ATCAAGAGATAGAACAGGTAGATACAaaagttattttacattttttacta
GAATCCTAGCAAGTATAATTGTAGTAaactttttgtacaaaaatgttcct
ttttaccacattctacttttttgtttGTGGTGATCGCAATATTGTAGGTC
ATCAAATGtaaaatttctttacaatatAATGTACATAAAAAGTTATGGAT
TAAAAAACATTATGTTCCCATAtttgttaaaaacaaaaatcgTCTACGGa
gtaaaaatttaagaaatcaTTTTGCAGGGATTTTTGAGTTCGTGTTTCGA
CTGgctaacttaaaaaaaaacttaaaacgtTTTTACGCAACTAACGGAGG
TACAAAGAGTTTCGAATATTCAAACAAGTAGGTCCAAGCTTTAAGAATAT
AAGGTTTTAAAACTAGAACCAAATCTTATATTAACGAGAATTGTTTCGAA
ATTTTATATCTCGACAAATGTGGGTCCAATACATACGTGATCTTTTTTCG
TTAGACTcgaaaacaaaatttcgagaatcCTTTAGCggtaaaatttacca
aaaatttAACTCCTTTTGAAATGGCCGGTATTTGGTCTTTTCCATTCTTC
CTTACCATCATTTCCAAGACTTGGCGAAGTGGCAACCATGCTTTCAATGG
CCGGTCAGTATAAGCACTTTGATTGGATGATGATTTTGGCAACAGTTTGG
ATGGCAAGCGCCGATCAATCAATTGACAGCTGAAACATTCTCCGCGTAAC
GTCACCACATGAACATTATCATTTCTTCAAAGTGTTGCTATGACGAAACC
gtaaaaataataaagtaaC
Run BLAST on NCBI

transcript from alignment at scaffold_44:332001..341535-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065521 ID=TCONS_00065521|Name=TCONS_00065521|organism=Clytia hemisphaerica|type=transcript|length=9535bp|location=Sequence derived from alignment at scaffold_44:332001..341535- (Clytia hemisphaerica)
GCTAGAGAGGAGAAGTTTTTTAGGATTGAATGAAAAAAAGACTTCCTATT
ACAGCAAAAAAGTGACTCTAATGCAAAAATGTTAGAAAAGTATTTGAAGA
CAATATGGTGAAACGTTTCGAGGGTTATAAATACGAGAAACTCTCAATAG
CAACAGAAGAACAAAATGGAGTTATAGATAAACAACCTAATGGTCAGAAT
CATACAGGTTTAAACTTTAGTCTCGAATCAGTTGATGAACTATTACACGA
AAACAAAGAAAATAGCAAAGGGTTGTGGAGCAATCTTTTTGATTTTTTAA
CTTGTGGTGCGTGCTGTAGAGTGGAGGTTTACTACCCTCGATATGAACAT
TTTCAGGTAAAAACACTTCAAACTTCTTTATATCAGAACTGACAAAGCTC
AGCTGTAACCTCAGTTAGGGAAAAGTTCTCCAAGGCTTTATACCACCGAT
ATTTTGTATTTTGCCCTTTCTTACTGAAATAAATAAACTCAATCTCAGAC
TGAGACTTGCGAAGTCTTGAACTTTTTCAATTTGTGATAAAAATGATAAC
ATCGAGTCTCATTGCTATCATAAAAGAGTATATGATTGTTAAGTAACAAT
ACCTAAAGCTACTTTTACGCATGACTCAATGATATCAAGGTTAACACCAT
CTACATAAGGTAATAGGGACCACTCCCTGTGAGTATAAACAAAAAGTTTT
AAGCTTTACATTAGGAAGTCACATTAAAGGTGAAAACTAATTTTGGTGTG
TCAAATATCAAAATTGTATCTTGAAATTGCCATNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTCGAAGGAGAA
ATCTTCCACTTAATTTGTTCATAAATTATGAAAAAGTGAATCAAAATTGT
GTTGAAGAAAAAACAACTCTTCATGATTGAATATGAATTTATTCTATCTC
TTTAAAACTCCGTGTGATGGAGAGCCTCATAAAATCATAATTCAAAGAAT
TCCTATACTTTTCTCTTGATTAACCAAAAGAGTGGTTTAAGTGGCCTCTA
TAAAGATGTTTGAATAGTAAAGGCAAAACATAATAATAAAAAATTTTTTT
AGGAAAGCGAAAGCTGTTTAACACTGAGACGCTTCTGATTCAAGCTTACG
TATCATTTGCTAGAGAGGAGAATTTTTTTTAGAAAGACTTCCTATTGCAG
CAAAAAAGTGACTCCAATGCAAAAATGTTAGAAAAGTATTTGAAGACAAT
ATGGTGAAACGTTTCGAGGGTTATAAATACGAGAAACTCTCAATAGCAAC
AGAAGAACAAAATGGAGTTATAGATAAACAACCTAATGGTCAGAATCATA
CAGGTTTAAACTTTAGTCTCGAATCAGTTGATGAACTATTACACGAAAAC
AAAGAAAATAGCAAAGGGTTGTGGAGCAATCTTTTTGATTTTTTAACTTG
TGGTGCGTGCTGTAGAGTGGAGGTTTACTACCCTCGATATGAACATTTTC
AGGTAAAAACACTTCAAACTTCTTTATATCAGAACTGACAAAGCTCAGCT
GTAACCTCAGTTAGGGAAAAGTTCTCCAAAGGCTTTATACCACCGATATT
TTGTATTTTGCCCTTTCTTACTGAAATAAATAAACTCAATCTCAGACTGA
GACTTGCGAAGTCTTGAACTTTTTCAATTTGTGATAAAAATGATAACATC
GAGTCTCATTGCTATCATAAAAGAGTATATGATTGTTAAGTAACAATACC
TAAAGCTACTTTTACGCATGACTCAATGATATCAAGGTTAACACCATCTA
CATAAGGTAATAGGGACCACTCCCTGTGAGTATAAACAAAAAGTTTTAAG
CTTTACATTAGGAAGTCACATTAAAGGTGAAAACTAATTTTGGTGTGTCA
AATATCAAAATTGTATCTTGAAATTGCCATTAGATGGACAAAATACACGC
TTTTTTTATAAGAATGGTGTTTTTTCAATTCATCATAAATATTCTTAACT
TTTTTAGGAAAATTGAAATTGAATGATAGTTGAAAATTCAGTTGAAATTC
CATGATAGTGGTATTCTTTCCTTATCCTTAATTTTTTTTGCTAATTTCAT
CATAAATATTCTTATAAAAAAAGGTTGTACGAGGAAAAGAAGGAAATTTT
TCGATAAAACGTTCTTCTTAGCCACGTTTTTTGATGTTTGATGAATTACT
ATGAGGTTTTTCTTCTCTTGTTTGATCAACTTTATCAACAACGCGTCTTT
ACTGAAAGGTGGACTGGAAACAAGGTTACACACCAAGAACACGAGATGGA
AATCAAGGGAGCATCGGTTTTCGCACCTATAGAATTTCCCGCCAAAATTA
GAAAACAAACGCTGACATTGCACAAAAAAAAGTTCTTGTGCGCATGCGCT
TAAGGCAGAAGACAGAATTCGCGATATCTCATATTTCGTTTTCGTAACAT
ACACGTTTTTTTATAAGAAACAACTATATAAGAACACAAGGCTTCGATGG
CCGAAATGTTAAGAACAAGTTAAGAACATTTTAAGCCTTTGCCGACTCTA
AAACAGCCGAAACTCAAAAATTTAAGAACATCTGAAGGCTTCAAAAATTT
TGGACGTTCTTATAAAAAAAATGTGTACCCTCTGACAAAATGTAACAAGA
TTTCGTCACATCAGTATTTTACAGAAGGTGAAACAAAACTGTCCCAAATA
GTCCCGACTTATCCCCTAAAATGTATTAAACAAACAGAGAGCGATAGAAA
ACAAATGTAAAAGATAGAGGTCATATAAAAAAGTCAAAGAATAATAATCG
ATAAGAAATATAGGTCCAACAAGCAAAAATCTTGAGAACTCTGACTCGAA
TGTAGGACCTGCTATAAGGAGATACATATTCATCTACGGATGAATTTTTC
TGATCTGATTTAAGCCAATTTCACTTGACATTTAGATTTAGACAAAGAAA
TGACAATATTAAAACTTTTAAAGTGATAAAATTTGGTTTAAAAAAAGTTT
CTATTTTTGTTGCTTATAAAAAATGTCAAATCTCAGTGTTAAAAATAGAT
GACTTCTTTAAAATAGTCGGAAAAAATATTAAAATCAAAACAAAGATAAA
TAAAATGCTGGAATGTGTAAAAGCNTGTGAGTATAAACAAAAAGTTTTAA
GCTTTACATTAGGAAGTCACATTAAAGGTGAAAACTAATTTTGGTGTGTC
AAATATCAAAATTGTATCTTGAAATTGCCATTAGATGGACAAAATACACG
CTTTTTTTATAAGAATGGTGTTTTTTCAATTCATCATAAATATTCTTAAC
TTTTTTAGGAAAATTGAAATTGAATGATAGTTGAAAATTCAGTTGAAATT
CCATGATAGTGGTATTCTTTCCTTATCCTTAATTTTTTTTGCTAATTTCA
TCATAAATATTCTTATAAAAAAAGGTTGTACGAGGAAAAGAAGGAAATTT
TTCGATAAAACGTTCTTCTTAGCCACGTTTTTTGATGTTTGATGAATTAC
TATGAGGTTTTTCTTCTCTTGTTTGATCAACTTTATCAACAACGCGTCTT
TACTGAAAGGTGGACTGGAAACAAGGTTACACACCAAGAACACGAGATGG
AAATCAAGGGAGCATCGGTTTTCGCACCTATAGAATTTCCCGCCAAAATT
AGAAAACAAACGCTGACATTGCACAAAAAAAAGTTCTTGTGCGCATGCGC
TTAAGGCAGAAGACAGAATTCGCGATATCTCATATTTCGTTTTCGTAACA
TACACGTTTTTTTATAAGAAACAACTATATAAGAACGCAAGGCTTCGATG
GCCGAAATGTTAAGAACAAGTTAAGAACATTTTAAGCCTTTGCCGACTCT
AAAACAGCCGAAACTCAAAAATTTAAGAACATCTGAAGGCTTCAAAAATT
TTGGACGTTCTTATAAAAAAAATGTGTACCCTCTGACAAAATGTAACAAG
ATTTCGTCACATCAGTATTTTACAGAAGGTGAAACAAAACTGTCCCAAAT
AGTCCCGACTTATCCCCTAAAATGTATTAAACAAACAGAGAGCGATAGAA
AACAAATGTAAAAGATAGAGGTCATATAAAAAAGTCAAAGAATAATAATC
GATAAGAAATATAGGTCCAACAAGCAAAAATCTTGAGAACTCTGACTCGA
ATGTAGGACCTGCTATAAGGAGATACATATTCATCTACGGATGAATTTTT
CTGATCTGATTTAAGCCAATTTCACTTGACATTTAGATTTAGACAAAGAA
ATGACAATATTAAAACTTTTAAAGTGATAAACTTTGGTTTAAAAAAAGTT
TCTATTTTTGTTGCTTATAAAAAATGTCAAATCTCAGTGTTAAAAATAGA
TGACTTTTTTAAAAAAGTCGGAAAAAATATTAAAATCAAAACAAAGATAA
ATAAAATGCTGGAATGTGTAAAAGCTAAATGGTGTTGCAGGCTAATTGCA
CCATTTTCGTGTTTTCATAGCAAATCCTACATTCATCAAAACGTCAACAG
ACATTTTAGCAGCTTTTATAATTGGACTCCGGGAGAGTCCATTATTTATA
AAGTGTTTTATAATCAGATCAGATTTGACAAAACGTTATCGTTATTTGGG
GGTGAGGACATTATGCTANATCAGAGTTGACAAAACGTTATCGTTATTTG
GGGGTGAGGACATTATGCTATAAGATTTCAAAGTGATAAGACCTTCACTC
CAGGAGATTTAATAGTATACAGTGTATTATTATGTTAAAAATTTGAGCTT
GAATTTTGCTTCAATTTTATACCTACACGTGCTTAAGAGACTGTAGTGTT
GAAAAGGGTTTTCACTGACAAAACTTAATTTCGAGATGGTTAACCCAGCA
GTATTTAACAGTAACTTTGGTGAATGGAAAAAGAGAACGAAAAAAGATCG
TTACATGATTTTACCACAGGATTTGACTTTGTTGAAATTGGTGAATTTTG
AGGACTTTGTTGTCATGGATGTCATTGATAATATAGATTTTGGCAAAAAG
GTAGAATAGATCCGCCCTTTTGGTATTTTACCAAAGAAAATATCTAAGCC
ACCTTAGCTTTCCTGTATCATACTGTATGACAGAAGAAAGCTCTGAAAAA
GCAGCAGAAATTTTAAACCTTATTTCCCTTTATTTTTCAGAACTCAGTGA
CAAGCAAACAGTATGAAGGTAAGAAAAACTATTCAGTACAAAACCCTATA
GTCGATAATGAAGTGATTGGCATGCAACTACGCGATTGATTGAAATCTTA
TTTTGATATCATCCAAAGATTTAAGCAGAATATAGACTTGAAAGCATGAA
TTCAAAATTATAATTTGGGCCCAACATTGATGTCTCTTACCCCGATTATT
TCGCTGCATGAATTTATCTTGACAACATCCATTTTCTTTCCTCTTTTCAG
AATTAAAGAACGCATTCATTGCGTTTGATCGGAATTGCGATGGATTCATC
GATTCTGAAGATCTTGGATACGTCATGGGCAAACTTGGTCATGATCTGTC
ATCTAAAGAAGTCAAAAAGGTTTTCAAAGATATCTGCAAACACAGTACGT
AAAACTAAGTATTACTTTCAGCCTTGGCTTAACTAGACTGAGTTTTCTTC
GACTGATCATAAAGCCATAAACCAATATTTGGGATTATCTTTATTAGGGG
CCTCTGCTAATCCTCAATCCTCAAAAATGTTCTTACAGAAAGTATGGAGG
TATGTGAATCTTTCGCCTTTTAGTCATTCGCTTAATTAATTTCCTTGATA
AGTTGGTGAGGTTTTAGCTTGTAAGGGAGATGATGTTTCTATACGCGAAC
TGAAGTGATGCTTTAGATAAGATAAGATCCAAGAGTGGAATTGAGTAGAT
TTTGAAGGATTTCGGTAAACAAATGTTTCCTTGTTTGAACAAAAACCCAG
GAGGAAAAAGGTGTGTCCAATTTTCCCTTATTTCATCATGATTTTTGACA
AGTAAGTATAAATAAGGGAATAGTTGGAAAATCTCGTGCTATTCTATTCA
TAAATCAAAAAACTACCTTTCCGTGTTTCTCAAACGAATTTCGATAATTA
GGTTCACTAATAGGCTCAGATTATTAAGAAATGACTTGTAGCTTGTATGA
TAATTCGAAAAGCTAATAATCGAAAGGAATTTCTATTACTTCGTTTTAAA
GTGGAGATTTTCTTTTGTTTAAATAAGTCTTAATGAAGACAGCTTGAGAA
TGCTTTACAATGGTTTGCGTCCTGACGCACAGAGGCACTTTATCGACTTA
AAATCGAAATGAAAAGTGATTATCATTTGCAATGGTGACGTTTAGACTCA
AAGGTAGCTTTGCCAGTCCTCGGATATTGCTAGCGTTTCACGTTTCAAGC
CTAAAAATGTTCTTTTTTCATCATTTTGTGAGGATTCCTGTGCATTTCCT
AAGAAATTGGTTGTTGAAGAGTCTACAAAGTCTTAAAATGTTCTTAAAAT
GTTCTTAACATATTCACCATCGAAGCATTATGTTCTTAGATAGCTTGTTC
TTATATAAAAAACGTTCAACACGTTAAAACAGCATCCATTAAACATCCCC
ACGGCGTTTAATTAGGACTTATGGATTGCTAGTTTTCGACTACAAATGGA
CCATCGAGATTTCTCTAGCCAATTTAAGGTTGATACCTAAGACCCCCTAT
CTCAACTCCAGGCGAGAAAGTCGAAACAGACAAACCCTTTTTGTCTGTTG
AAAATACAAAAACTGACCTAAAATCATTTAAAATCAATAAAAGATGAAAT
TAAAAAAAAAATTCATACCATAGTTTGACCAAATGATATTTTCTCCTAAC
ATAGGTAATGGCAAGATGGATTTCACAGATTTCGTAGAAATGATGGCACA
AGATAAATTAGTTCTAACCACAAGCGAACAAGAGATCTTAGCAGCGTTCC
AATTTCTTGATCAAAATCATGATGGATATATCACCATAGATGAGTTACTA
CAACGTTTCCATGGCTGCCTGTCCGATACGGAAGCATCCCGGTTAATGTG
TGAAGCGGACGCTAATGGTGACGGAAAGATCGATTTCAACGGTGAGTGAT
TGGTTCAGCCATTTTATTGGAAGATTTTAGTATGGTTATTATTAAAGTCA
CCATTTCATTAGTTTTATTCTTTGAGTTAATTTTTCATTAGTCATCTAAA
GAGGGACATAAAGATTATTTGAGGATAAGAAATGTGTTAGTAAATTGAAA
GCAATGACGGGGCAAATCAAGTATTCATGATATGCACCAATGCAATGTTG
CAACTTTTCTGTTTTTGTTCCACCCAAGACGTCACTTTTTCTATTTTTTA
AGTGACGTATTGGATGGAAAATTTTAAAAATTCTCAAAGACTCTCCAGTG
ATGGTGCATATCATGAATATAACAGTGTAATTTTCGACAAAGAAAGCTAA
ATTTTCAACCCTTTTGAATTTTGTTTTCCAGAATTCAAACACATGATGTT
TAATCAAGAACGAAGCATCTCATTGGCTCAATCTGAAGTAGAATTATACT
CATGAGAAAGAAAGAAATCTCATCCTTCGAAAATTTCACTACTCAAAGAA
AAATCGTCCAAATCCACATTTTTGCTGGTCATGTTTACCATGGCAACGAA
TTCATATCATTCGCGCAAGGATTGACGACATCAATATGGTACCCACAATG
CTGTTCGGTGTCATTAGATGAAATACAGTACACCAGAGACACAAGAAAAA
CGAAAATTAGAACATTTTTTTATAGACATCAAAACTAATGAATATTGATA
GGGAATAGTACAGAGATAACTTGACATAAAGCGCTTCATCCAATCAGGGG
GAGTCCTGGACCTTATTTTCAAATATGACAATTTATAGTATTCTAGTACC
GTTACTCGAGAGGGAGATTTTAACCACCACAAAAATGTACTTTTTCGGTC
TTCCAGTTGTACCCACAACTTTTTGTGATATTCTTACTTTGAACAGAAAG
ATTTTGGTACTGTTATGGTGAAATTTACCCCTCTTAAGTAGCGGTACTAA
ATATTTTGGGAAGNATTGTTATGGTGAAATCCCTCCTAAGTAGCGGTGCT
AAGTATTTTGGTAAACATTATCTAATCGTCGTTGCCATTGATGCAAAAGG
TCCAATCTCAAAATTAGTGTCTGAGAAAACTCAGGTTTATTTTGCTTTGG
AGGTTAGCCCTTTTTCTTGTAAGGATCATATCTACACACTAATTATATTA
TACTAAGTCAGATTAGACCTTTTGCCTTGATGACAGCGCTTTCTTGATAT
TCATGACGTAATCTTTTGTACGGAAACACCCGAAAAACACCGGGCGTTTG
CTATCAGTTTTGAATTTATATAACTAAACTGGTGGTAAACGCCCGGTGTT
TTTCGGGTGTTTCCGTATAAAATTTTACGTCGTGAATATCAAGAATAATG
TAAGGCGTCCTTGATAATCAAGAGATAGAACAGGTAGATACAAAAGTTAT
TTTACATTTTTTACTAGAATCCTAGCAAGTATAATTGTAGTAAACTTTTT
GTACAAAAATGTTCCTTTTTACCACATTCTACTTTTTTGTTTGTGGTGAT
CGCAATATTGTAGGTCATCAAATGTAAAATTTCTTTACAATATAATGTAC
ATAAAAAGTTATGGATTAAAAAACATTATGTTCCCATATTTGTTAAAAAC
AAAAATCGTCTACGGAGTAAAAATTTAAGAAATCATTTTGCAGGGATTTT
TGAGTTCGTGTTTCGACTGGCTAACTTAAAAAAAAACTTAAAACGTTTTT
ACGCAACTAACGGAGGTACAAAGAGTTTCGAATATTCAAACAAGTAGGTC
CAAGCTTTAAGAATATAAGGTTTTAAAACTAGAACCAAATCTTATATTAA
CGAGAATTGTTTCGAAATTTTATATCTCGACAAATGTGGGTCCAATACAT
ACGTGATCTTTTTTCGTTAGACTCGAAAACAAAATTTCGAGAATCCTTTA
GCGGTAAAATTTACCAAAAATTTAACTCCTTTTGAAATGGCCGGTATTTG
GTCTTTTCCATTCTTCCTTACCATCATTTCCAAGACTTGGCGAAGTGGCA
ACCATGCTTTCAATGGCCGGTCAGTATAAGCACTTTGATTGGATGATGAT
TTTGGCAACAGTTTGGATGGCAAGCGCCGATCAATCAATTGACAGCTGAA
ACATTCTCCGCGTAACGTCACCACATGAACATTATCATTTCTTCAAAGTG
TTGCTATGACGAAACCGTAAAAATAATAAAGTAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041059XLOC_041059Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065521-exon-scaffold_44-1575043694:341180..341535TCONS_00065521-exon-scaffold_44-1575043694:341180..341535Clytia hemisphaericaexon
TCONS_00065521-exon-scaffold_44-1575043694:336068..336095TCONS_00065521-exon-scaffold_44-1575043694:336068..336095Clytia hemisphaericaexon
TCONS_00065521-exon-scaffold_44-1575043694:335692..335835TCONS_00065521-exon-scaffold_44-1575043694:335692..335835Clytia hemisphaericaexon
TCONS_00065521-exon-scaffold_44-1575043694:334195..334431TCONS_00065521-exon-scaffold_44-1575043694:334195..334431Clytia hemisphaericaexon
TCONS_00065521-exon-scaffold_44-1575043694:332001..333804TCONS_00065521-exon-scaffold_44-1575043694:332001..333804Clytia hemisphaericaexon
TCONS_00065521-exon-scaffold_44-1510915933:341180..341535TCONS_00065521-exon-scaffold_44-1510915933:341180..341535Clytia hemisphaericaexon
TCONS_00065521-exon-scaffold_44-1510915933:336068..336095TCONS_00065521-exon-scaffold_44-1510915933:336068..336095Clytia hemisphaericaexon
TCONS_00065521-exon-scaffold_44-1510915933:335692..335835TCONS_00065521-exon-scaffold_44-1510915933:335692..335835Clytia hemisphaericaexon
TCONS_00065521-exon-scaffold_44-1510915933:334195..334431TCONS_00065521-exon-scaffold_44-1510915933:334195..334431Clytia hemisphaericaexon
TCONS_00065521-exon-scaffold_44-1510915933:332001..333804TCONS_00065521-exon-scaffold_44-1510915933:332001..333804Clytia hemisphaericaexon
TCONS_00065521-exon-scaffold_44-1491911889:341180..341535TCONS_00065521-exon-scaffold_44-1491911889:341180..341535Clytia hemisphaericaexon
TCONS_00065521-exon-scaffold_44-1491911889:336068..336095TCONS_00065521-exon-scaffold_44-1491911889:336068..336095Clytia hemisphaericaexon
TCONS_00065521-exon-scaffold_44-1491911889:335692..335835TCONS_00065521-exon-scaffold_44-1491911889:335692..335835Clytia hemisphaericaexon
TCONS_00065521-exon-scaffold_44-1491911889:334195..334431TCONS_00065521-exon-scaffold_44-1491911889:334195..334431Clytia hemisphaericaexon
TCONS_00065521-exon-scaffold_44-1491911889:332001..333804TCONS_00065521-exon-scaffold_44-1491911889:332001..333804Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_44supercontigscaffold_44:332001..341535 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.0775497	3.48182	0.602622	3.6929	0	3.42629	5.40222	4.41486	2.57064	3.60071	3.43297	3.07728	2.60907	5.89485	0.095927	3.74328	2.14007	3.86916	3.52471	5.33421	0.601555	0.491215	0.468757	0.427751
Blast
[Close]
BLAST of TCONS_00065521 vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.339e-23
Identity = 53/145 (36.55%), Postives = 88/145 (60.69%), Query Frame = 3 
Query:  357 NSVTSKQYEELKNAFIAFDRNCDGFIDSEDLGYVMGKLGHDLSSKEVKKVFKDICKHSNGKMDFTDFVEMMAQDKLVLTTSEQEILAAFQFLDQNHDGYITIDEL---LQRFHGCLSDTEASRLMCEADANGDGKIDFNEFKHMM 782
            + +T +Q  E K AF  FD++ DG I +++LG VM  LG + +  E++ +  ++    NG +DF +F+ MMA+ K+  T SE+EI  AF+  D++ +GYI+  EL   +      L+D E   ++ EAD +GDG++++ EF  MM
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR-KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
The following BLAST results are available for this feature:
BLAST of TCONS_00065521 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM36.339e-2336.55Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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