TCONS_00065522 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065522
Unique NameTCONS_00065522
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2573

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065522 ID=TCONS_00065522|Name=TCONS_00065522|organism=Clytia hemisphaerica|type=transcript|length=2573bp
ATTTGCTAGAGAGGAGAAGTTTTTTaggattgaatgaaaaaaagacTTCC
TATTACAGCAAAAAAGTGACTCTAAtgcaaaaatgttagaaaagtATTTG
AAGACAATATGGTGAAACGTTTCGAGGGTTATAAATACGAGAAACTCTCA
ATAGCAACAGAAGAACAAAATGGAGTTATAGATAAACAACCTAATGGTCA
GAATCATACAGGTTTAAACTTTAGTCTCGAATCAGTTGATGAACTATTAc
acgaaaacaaagaaaatagcaaagggTTGTGGAgcaatctttttgatttt
ttaacttGTGGTGCGTGCTGTAGAGTGGAGGTTTACTACCCTCGATATGA
ACATTTTCAGAACTCAGTGACAAGCAAACAGTATGAAGAATTAAAGAACG
CATTCATTGCGTTTGATCGGAATTGCGATGGATTCATCGATTCTGAAGAT
CTTGGATACGTCATGGGCAAACTTGGTCATGATCTGTCATCTAAAGAAGT
CAAAAAGGTTTTCAAAGATATCTGCAAACACAGTAATGGCAAGATGGATT
TCACAGATTTCGTAGAAATGATGGCACAAGATAAATTAGTTCTAACCACA
AGCGAACAAGAGATCTTAGCAGCGTTCCAATTTCTTGATCAAAATCATGA
TGGATATATCACCATAGATGAGTTACTACAACGTTTCCATGGCTGCCTGT
CCGATACGGAAGCATCCCGGTTAATGTGTGAAGCGGACGCTAATGGTGAC
GGAAAGATCGATTTCAACGAATTCAAACACATGATGTTTAATCAAGAACG
AAGCATCTCATTGGCTCAATCTGAAGTAGAATTATACTcatgagaaagaa
agaaatctcATCCTTCGAAAATTTCACTACTCAAAGAAAAATCGTCCAAA
TCCACATTTTTGCTGGTCATGTTTACCATGGCAACGAATTCATATCATTC
GCGCAAGGATTGACGACATCAATATGGTACCCACAATGCTGTTCGGTGTC
ATTAGATGAAATACAGTACACCAGAGACAcaagaaaaacgaaaattagaa
catttttttatagACATCAAAACTAATGAATATTGATAGGGAATAGTACA
GAGATAACTTGACATAAAGCGCTTCATCCAATCAGGGGGAGTCCTGgacc
ttattttcaaatatgaCAATTTATAGTATTCTAGTACCGTTACTCGAGAG
GGAGATTTTAACCACCACAAAAATGTACTTTTTCGGTCTTCCAGTTGTAC
CCACAACTTTTTGTGATATTCTTACTTTGAACAGAAAGATTTTGGTACTG
TTATGGTGAAATTTACCCCTCTTAAGTAGCGGTACTAAATATTTTGGGAA
GNATTGTTATGGTGAAATCCCTCCTAAGTAGCGGTGCTAAGTATTTTGGT
AAACATTATCTAATCGTCGTTGCCATTGATgcaaaaggtccaatctcaaa
attagtgtcTGAGAAAACTCAGGTTTATTTTGCTTTGGAGGTTAGCCCTT
TTTCTTGTAAGGATCATATCTACACACTAATTATATTATACTAAGTCAGA
TTAGACCTTTTGCCTTGATGACAGCGctttcttgatattcatgacgtaat
cttttgtacggaaacacccgaaaaacacCGGGCGTTTGCTATCAGTTTTG
AATTTATATAACTAAACTGGTGGTAAACGCCCGgtgtttttcgggtgttt
ccgtataaaattTTACGTCGTGAATATCAAGAATAATGTAAGGCGTCCTT
GATAATCAAGAGATAGAACAGGTAGATACAaaagttattttacatttttt
actaGAATCCTAGCAAGTATAATTGTAGTAaactttttgtacaaaaatgt
tcctttttaccacattctacttttttgtttGTGGTGATCGCAATATTGTA
GGTCATCAAATGtaaaatttctttacaatatAATGTACATAAAAAGTTAT
GGATTAAAAAACATTATGTTCCCATAtttgttaaaaacaaaaatcgTCTA
CGGagtaaaaatttaagaaatcaTTTTGCAGGGATTTTTGAGTTCGTGTT
TCGACTGgctaacttaaaaaaaaacttaaaacgtTTTTACGCAACTAACG
GAGGTACAAAGAGTTTCGAATATTCAAACAAGTAGGTCCAAGCTTTAAGA
ATATAAGGTTTTAAAACTAGAACCAAATCTTATATTAACGAGAATTGTTT
CGAAATTTTATATCTCGACAAATGTGGGTCCAATACATACGTGATCTTTT
TTCGTTAGACTcgaaaacaaaatttcgagaatcCTTTAGCggtaaaattt
accaaaaatttAACTCCTTTTGAAATGGCCGGTATTTGGTCTTTTCCATT
CTTCCTTACCATCATTTCCAAGACTTGGCGAAGTGGCAACCATGCTTTCA
ATGGCCGGTCAGTATAAGCACTTTGATTGGATGATGATTTTGGCAACAGT
TTGGATGGCAAGCGCCGATCAATCAATTGACAGCTGAAACATTCTCCGCG
TAACGTCACCACATGAACATTATCATTTCTTCAAAGTGTTGCTATGACGA
AACCgtaaaaataataaagtaaC
Run BLAST on NCBI

protein sequence of Calmodulin protein

>TCONS_00065522-protein ID=TCONS_00065522-protein|Name=Calmodulin protein|organism=Clytia hemisphaerica|type=polypeptide|length=244bp
MVKRFEGYKYEKLSIATEEQNGVIDKQPNGQNHTGLNFSLESVDELLHEN
KENSKGLWSNLFDFLTCGACCRVEVYYPRYEHFQNSVTSKQYEELKNAFI
AFDRNCDGFIDSEDLGYVMGKLGHDLSSKEVKKVFKDICKHSNGKMDFTD
FVEMMAQDKLVLTTSEQEILAAFQFLDQNHDGYITIDELLQRFHGCLSDT
EASRLMCEADANGDGKIDFNEFKHMMFNQERSISLAQSEVELYS
Run BLAST on NCBI

transcript from alignment at scaffold_44:332001..341539-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065522 ID=TCONS_00065522|Name=TCONS_00065522|organism=Clytia hemisphaerica|type=transcript|length=9539bp|location=Sequence derived from alignment at scaffold_44:332001..341539- (Clytia hemisphaerica)
ATTTGCTAGAGAGGAGAAGTTTTTTAGGATTGAATGAAAAAAAGACTTCC
TATTACAGCAAAAAAGTGACTCTAATGCAAAAATGTTAGAAAAGTATTTG
AAGACAATATGGTGAAACGTTTCGAGGGTTATAAATACGAGAAACTCTCA
ATAGCAACAGAAGAACAAAATGGAGTTATAGATAAACAACCTAATGGTCA
GAATCATACAGGTTTAAACTTTAGTCTCGAATCAGTTGATGAACTATTAC
ACGAAAACAAAGAAAATAGCAAAGGGTTGTGGAGCAATCTTTTTGATTTT
TTAACTTGTGGTGCGTGCTGTAGAGTGGAGGTTTACTACCCTCGATATGA
ACATTTTCAGGTAAAAACACTTCAAACTTCTTTATATCAGAACTGACAAA
GCTCAGCTGTAACCTCAGTTAGGGAAAAGTTCTCCAAGGCTTTATACCAC
CGATATTTTGTATTTTGCCCTTTCTTACTGAAATAAATAAACTCAATCTC
AGACTGAGACTTGCGAAGTCTTGAACTTTTTCAATTTGTGATAAAAATGA
TAACATCGAGTCTCATTGCTATCATAAAAGAGTATATGATTGTTAAGTAA
CAATACCTAAAGCTACTTTTACGCATGACTCAATGATATCAAGGTTAACA
CCATCTACATAAGGTAATAGGGACCACTCCCTGTGAGTATAAACAAAAAG
TTTTAAGCTTTACATTAGGAAGTCACATTAAAGGTGAAAACTAATTTTGG
TGTGTCAAATATCAAAATTGTATCTTGAAATTGCCATNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTCGAAGG
AGAAATCTTCCACTTAATTTGTTCATAAATTATGAAAAAGTGAATCAAAA
TTGTGTTGAAGAAAAAACAACTCTTCATGATTGAATATGAATTTATTCTA
TCTCTTTAAAACTCCGTGTGATGGAGAGCCTCATAAAATCATAATTCAAA
GAATTCCTATACTTTTCTCTTGATTAACCAAAAGAGTGGTTTAAGTGGCC
TCTATAAAGATGTTTGAATAGTAAAGGCAAAACATAATAATAAAAAATTT
TTTTAGGAAAGCGAAAGCTGTTTAACACTGAGACGCTTCTGATTCAAGCT
TACGTATCATTTGCTAGAGAGGAGAATTTTTTTTAGAAAGACTTCCTATT
GCAGCAAAAAAGTGACTCCAATGCAAAAATGTTAGAAAAGTATTTGAAGA
CAATATGGTGAAACGTTTCGAGGGTTATAAATACGAGAAACTCTCAATAG
CAACAGAAGAACAAAATGGAGTTATAGATAAACAACCTAATGGTCAGAAT
CATACAGGTTTAAACTTTAGTCTCGAATCAGTTGATGAACTATTACACGA
AAACAAAGAAAATAGCAAAGGGTTGTGGAGCAATCTTTTTGATTTTTTAA
CTTGTGGTGCGTGCTGTAGAGTGGAGGTTTACTACCCTCGATATGAACAT
TTTCAGGTAAAAACACTTCAAACTTCTTTATATCAGAACTGACAAAGCTC
AGCTGTAACCTCAGTTAGGGAAAAGTTCTCCAAAGGCTTTATACCACCGA
TATTTTGTATTTTGCCCTTTCTTACTGAAATAAATAAACTCAATCTCAGA
CTGAGACTTGCGAAGTCTTGAACTTTTTCAATTTGTGATAAAAATGATAA
CATCGAGTCTCATTGCTATCATAAAAGAGTATATGATTGTTAAGTAACAA
TACCTAAAGCTACTTTTACGCATGACTCAATGATATCAAGGTTAACACCA
TCTACATAAGGTAATAGGGACCACTCCCTGTGAGTATAAACAAAAAGTTT
TAAGCTTTACATTAGGAAGTCACATTAAAGGTGAAAACTAATTTTGGTGT
GTCAAATATCAAAATTGTATCTTGAAATTGCCATTAGATGGACAAAATAC
ACGCTTTTTTTATAAGAATGGTGTTTTTTCAATTCATCATAAATATTCTT
AACTTTTTTAGGAAAATTGAAATTGAATGATAGTTGAAAATTCAGTTGAA
ATTCCATGATAGTGGTATTCTTTCCTTATCCTTAATTTTTTTTGCTAATT
TCATCATAAATATTCTTATAAAAAAAGGTTGTACGAGGAAAAGAAGGAAA
TTTTTCGATAAAACGTTCTTCTTAGCCACGTTTTTTGATGTTTGATGAAT
TACTATGAGGTTTTTCTTCTCTTGTTTGATCAACTTTATCAACAACGCGT
CTTTACTGAAAGGTGGACTGGAAACAAGGTTACACACCAAGAACACGAGA
TGGAAATCAAGGGAGCATCGGTTTTCGCACCTATAGAATTTCCCGCCAAA
ATTAGAAAACAAACGCTGACATTGCACAAAAAAAAGTTCTTGTGCGCATG
CGCTTAAGGCAGAAGACAGAATTCGCGATATCTCATATTTCGTTTTCGTA
ACATACACGTTTTTTTATAAGAAACAACTATATAAGAACACAAGGCTTCG
ATGGCCGAAATGTTAAGAACAAGTTAAGAACATTTTAAGCCTTTGCCGAC
TCTAAAACAGCCGAAACTCAAAAATTTAAGAACATCTGAAGGCTTCAAAA
ATTTTGGACGTTCTTATAAAAAAAATGTGTACCCTCTGACAAAATGTAAC
AAGATTTCGTCACATCAGTATTTTACAGAAGGTGAAACAAAACTGTCCCA
AATAGTCCCGACTTATCCCCTAAAATGTATTAAACAAACAGAGAGCGATA
GAAAACAAATGTAAAAGATAGAGGTCATATAAAAAAGTCAAAGAATAATA
ATCGATAAGAAATATAGGTCCAACAAGCAAAAATCTTGAGAACTCTGACT
CGAATGTAGGACCTGCTATAAGGAGATACATATTCATCTACGGATGAATT
TTTCTGATCTGATTTAAGCCAATTTCACTTGACATTTAGATTTAGACAAA
GAAATGACAATATTAAAACTTTTAAAGTGATAAAATTTGGTTTAAAAAAA
GTTTCTATTTTTGTTGCTTATAAAAAATGTCAAATCTCAGTGTTAAAAAT
AGATGACTTCTTTAAAATAGTCGGAAAAAATATTAAAATCAAAACAAAGA
TAAATAAAATGCTGGAATGTGTAAAAGCNTGTGAGTATAAACAAAAAGTT
TTAAGCTTTACATTAGGAAGTCACATTAAAGGTGAAAACTAATTTTGGTG
TGTCAAATATCAAAATTGTATCTTGAAATTGCCATTAGATGGACAAAATA
CACGCTTTTTTTATAAGAATGGTGTTTTTTCAATTCATCATAAATATTCT
TAACTTTTTTAGGAAAATTGAAATTGAATGATAGTTGAAAATTCAGTTGA
AATTCCATGATAGTGGTATTCTTTCCTTATCCTTAATTTTTTTTGCTAAT
TTCATCATAAATATTCTTATAAAAAAAGGTTGTACGAGGAAAAGAAGGAA
ATTTTTCGATAAAACGTTCTTCTTAGCCACGTTTTTTGATGTTTGATGAA
TTACTATGAGGTTTTTCTTCTCTTGTTTGATCAACTTTATCAACAACGCG
TCTTTACTGAAAGGTGGACTGGAAACAAGGTTACACACCAAGAACACGAG
ATGGAAATCAAGGGAGCATCGGTTTTCGCACCTATAGAATTTCCCGCCAA
AATTAGAAAACAAACGCTGACATTGCACAAAAAAAAGTTCTTGTGCGCAT
GCGCTTAAGGCAGAAGACAGAATTCGCGATATCTCATATTTCGTTTTCGT
AACATACACGTTTTTTTATAAGAAACAACTATATAAGAACGCAAGGCTTC
GATGGCCGAAATGTTAAGAACAAGTTAAGAACATTTTAAGCCTTTGCCGA
CTCTAAAACAGCCGAAACTCAAAAATTTAAGAACATCTGAAGGCTTCAAA
AATTTTGGACGTTCTTATAAAAAAAATGTGTACCCTCTGACAAAATGTAA
CAAGATTTCGTCACATCAGTATTTTACAGAAGGTGAAACAAAACTGTCCC
AAATAGTCCCGACTTATCCCCTAAAATGTATTAAACAAACAGAGAGCGAT
AGAAAACAAATGTAAAAGATAGAGGTCATATAAAAAAGTCAAAGAATAAT
AATCGATAAGAAATATAGGTCCAACAAGCAAAAATCTTGAGAACTCTGAC
TCGAATGTAGGACCTGCTATAAGGAGATACATATTCATCTACGGATGAAT
TTTTCTGATCTGATTTAAGCCAATTTCACTTGACATTTAGATTTAGACAA
AGAAATGACAATATTAAAACTTTTAAAGTGATAAACTTTGGTTTAAAAAA
AGTTTCTATTTTTGTTGCTTATAAAAAATGTCAAATCTCAGTGTTAAAAA
TAGATGACTTTTTTAAAAAAGTCGGAAAAAATATTAAAATCAAAACAAAG
ATAAATAAAATGCTGGAATGTGTAAAAGCTAAATGGTGTTGCAGGCTAAT
TGCACCATTTTCGTGTTTTCATAGCAAATCCTACATTCATCAAAACGTCA
ACAGACATTTTAGCAGCTTTTATAATTGGACTCCGGGAGAGTCCATTATT
TATAAAGTGTTTTATAATCAGATCAGATTTGACAAAACGTTATCGTTATT
TGGGGGTGAGGACATTATGCTANATCAGAGTTGACAAAACGTTATCGTTA
TTTGGGGGTGAGGACATTATGCTATAAGATTTCAAAGTGATAAGACCTTC
ACTCCAGGAGATTTAATAGTATACAGTGTATTATTATGTTAAAAATTTGA
GCTTGAATTTTGCTTCAATTTTATACCTACACGTGCTTAAGAGACTGTAG
TGTTGAAAAGGGTTTTCACTGACAAAACTTAATTTCGAGATGGTTAACCC
AGCAGTATTTAACAGTAACTTTGGTGAATGGAAAAAGAGAACGAAAAAAG
ATCGTTACATGATTTTACCACAGGATTTGACTTTGTTGAAATTGGTGAAT
TTTGAGGACTTTGTTGTCATGGATGTCATTGATAATATAGATTTTGGCAA
AAAGGTAGAATAGATCCGCCCTTTTGGTATTTTACCAAAGAAAATATCTA
AGCCACCTTAGCTTTCCTGTATCATACTGTATGACAGAAGAAAGCTCTGA
AAAAGCAGCAGAAATTTTAAACCTTATTTCCCTTTATTTTTCAGAACTCA
GTGACAAGCAAACAGTATGAAGGTAAGAAAAACTATTCAGTACAAAACCC
TATAGTCGATAATGAAGTGATTGGCATGCAACTACGCGATTGATTGAAAT
CTTATTTTGATATCATCCAAAGATTTAAGCAGAATATAGACTTGAAAGCA
TGAATTCAAAATTATAATTTGGGCCCAACATTGATGTCTCTTACCCCGAT
TATTTCGCTGCATGAATTTATCTTGACAACATCCATTTTCTTTCCTCTTT
TCAGAATTAAAGAACGCATTCATTGCGTTTGATCGGAATTGCGATGGATT
CATCGATTCTGAAGATCTTGGATACGTCATGGGCAAACTTGGTCATGATC
TGTCATCTAAAGAAGTCAAAAAGGTTTTCAAAGATATCTGCAAACACAGT
ACGTAAAACTAAGTATTACTTTCAGCCTTGGCTTAACTAGACTGAGTTTT
CTTCGACTGATCATAAAGCCATAAACCAATATTTGGGATTATCTTTATTA
GGGGCCTCTGCTAATCCTCAATCCTCAAAAATGTTCTTACAGAAAGTATG
GAGGTATGTGAATCTTTCGCCTTTTAGTCATTCGCTTAATTAATTTCCTT
GATAAGTTGGTGAGGTTTTAGCTTGTAAGGGAGATGATGTTTCTATACGC
GAACTGAAGTGATGCTTTAGATAAGATAAGATCCAAGAGTGGAATTGAGT
AGATTTTGAAGGATTTCGGTAAACAAATGTTTCCTTGTTTGAACAAAAAC
CCAGGAGGAAAAAGGTGTGTCCAATTTTCCCTTATTTCATCATGATTTTT
GACAAGTAAGTATAAATAAGGGAATAGTTGGAAAATCTCGTGCTATTCTA
TTCATAAATCAAAAAACTACCTTTCCGTGTTTCTCAAACGAATTTCGATA
ATTAGGTTCACTAATAGGCTCAGATTATTAAGAAATGACTTGTAGCTTGT
ATGATAATTCGAAAAGCTAATAATCGAAAGGAATTTCTATTACTTCGTTT
TAAAGTGGAGATTTTCTTTTGTTTAAATAAGTCTTAATGAAGACAGCTTG
AGAATGCTTTACAATGGTTTGCGTCCTGACGCACAGAGGCACTTTATCGA
CTTAAAATCGAAATGAAAAGTGATTATCATTTGCAATGGTGACGTTTAGA
CTCAAAGGTAGCTTTGCCAGTCCTCGGATATTGCTAGCGTTTCACGTTTC
AAGCCTAAAAATGTTCTTTTTTCATCATTTTGTGAGGATTCCTGTGCATT
TCCTAAGAAATTGGTTGTTGAAGAGTCTACAAAGTCTTAAAATGTTCTTA
AAATGTTCTTAACATATTCACCATCGAAGCATTATGTTCTTAGATAGCTT
GTTCTTATATAAAAAACGTTCAACACGTTAAAACAGCATCCATTAAACAT
CCCCACGGCGTTTAATTAGGACTTATGGATTGCTAGTTTTCGACTACAAA
TGGACCATCGAGATTTCTCTAGCCAATTTAAGGTTGATACCTAAGACCCC
CTATCTCAACTCCAGGCGAGAAAGTCGAAACAGACAAACCCTTTTTGTCT
GTTGAAAATACAAAAACTGACCTAAAATCATTTAAAATCAATAAAAGATG
AAATTAAAAAAAAAATTCATACCATAGTTTGACCAAATGATATTTTCTCC
TAACATAGGTAATGGCAAGATGGATTTCACAGATTTCGTAGAAATGATGG
CACAAGATAAATTAGTTCTAACCACAAGCGAACAAGAGATCTTAGCAGCG
TTCCAATTTCTTGATCAAAATCATGATGGATATATCACCATAGATGAGTT
ACTACAACGTTTCCATGGCTGCCTGTCCGATACGGAAGCATCCCGGTTAA
TGTGTGAAGCGGACGCTAATGGTGACGGAAAGATCGATTTCAACGGTGAG
TGATTGGTTCAGCCATTTTATTGGAAGATTTTAGTATGGTTATTATTAAA
GTCACCATTTCATTAGTTTTATTCTTTGAGTTAATTTTTCATTAGTCATC
TAAAGAGGGACATAAAGATTATTTGAGGATAAGAAATGTGTTAGTAAATT
GAAAGCAATGACGGGGCAAATCAAGTATTCATGATATGCACCAATGCAAT
GTTGCAACTTTTCTGTTTTTGTTCCACCCAAGACGTCACTTTTTCTATTT
TTTAAGTGACGTATTGGATGGAAAATTTTAAAAATTCTCAAAGACTCTCC
AGTGATGGTGCATATCATGAATATAACAGTGTAATTTTCGACAAAGAAAG
CTAAATTTTCAACCCTTTTGAATTTTGTTTTCCAGAATTCAAACACATGA
TGTTTAATCAAGAACGAAGCATCTCATTGGCTCAATCTGAAGTAGAATTA
TACTCATGAGAAAGAAAGAAATCTCATCCTTCGAAAATTTCACTACTCAA
AGAAAAATCGTCCAAATCCACATTTTTGCTGGTCATGTTTACCATGGCAA
CGAATTCATATCATTCGCGCAAGGATTGACGACATCAATATGGTACCCAC
AATGCTGTTCGGTGTCATTAGATGAAATACAGTACACCAGAGACACAAGA
AAAACGAAAATTAGAACATTTTTTTATAGACATCAAAACTAATGAATATT
GATAGGGAATAGTACAGAGATAACTTGACATAAAGCGCTTCATCCAATCA
GGGGGAGTCCTGGACCTTATTTTCAAATATGACAATTTATAGTATTCTAG
TACCGTTACTCGAGAGGGAGATTTTAACCACCACAAAAATGTACTTTTTC
GGTCTTCCAGTTGTACCCACAACTTTTTGTGATATTCTTACTTTGAACAG
AAAGATTTTGGTACTGTTATGGTGAAATTTACCCCTCTTAAGTAGCGGTA
CTAAATATTTTGGGAAGNATTGTTATGGTGAAATCCCTCCTAAGTAGCGG
TGCTAAGTATTTTGGTAAACATTATCTAATCGTCGTTGCCATTGATGCAA
AAGGTCCAATCTCAAAATTAGTGTCTGAGAAAACTCAGGTTTATTTTGCT
TTGGAGGTTAGCCCTTTTTCTTGTAAGGATCATATCTACACACTAATTAT
ATTATACTAAGTCAGATTAGACCTTTTGCCTTGATGACAGCGCTTTCTTG
ATATTCATGACGTAATCTTTTGTACGGAAACACCCGAAAAACACCGGGCG
TTTGCTATCAGTTTTGAATTTATATAACTAAACTGGTGGTAAACGCCCGG
TGTTTTTCGGGTGTTTCCGTATAAAATTTTACGTCGTGAATATCAAGAAT
AATGTAAGGCGTCCTTGATAATCAAGAGATAGAACAGGTAGATACAAAAG
TTATTTTACATTTTTTACTAGAATCCTAGCAAGTATAATTGTAGTAAACT
TTTTGTACAAAAATGTTCCTTTTTACCACATTCTACTTTTTTGTTTGTGG
TGATCGCAATATTGTAGGTCATCAAATGTAAAATTTCTTTACAATATAAT
GTACATAAAAAGTTATGGATTAAAAAACATTATGTTCCCATATTTGTTAA
AAACAAAAATCGTCTACGGAGTAAAAATTTAAGAAATCATTTTGCAGGGA
TTTTTGAGTTCGTGTTTCGACTGGCTAACTTAAAAAAAAACTTAAAACGT
TTTTACGCAACTAACGGAGGTACAAAGAGTTTCGAATATTCAAACAAGTA
GGTCCAAGCTTTAAGAATATAAGGTTTTAAAACTAGAACCAAATCTTATA
TTAACGAGAATTGTTTCGAAATTTTATATCTCGACAAATGTGGGTCCAAT
ACATACGTGATCTTTTTTCGTTAGACTCGAAAACAAAATTTCGAGAATCC
TTTAGCGGTAAAATTTACCAAAAATTTAACTCCTTTTGAAATGGCCGGTA
TTTGGTCTTTTCCATTCTTCCTTACCATCATTTCCAAGACTTGGCGAAGT
GGCAACCATGCTTTCAATGGCCGGTCAGTATAAGCACTTTGATTGGATGA
TGATTTTGGCAACAGTTTGGATGGCAAGCGCCGATCAATCAATTGACAGC
TGAAACATTCTCCGCGTAACGTCACCACATGAACATTATCATTTCTTCAA
AGTGTTGCTATGACGAAACCGTAAAAATAATAAAGTAAC

Coding sequence (CDS) from alignment at scaffold_44:332001..341539-

>TCONS_00065522 ID=TCONS_00065522|Name=TCONS_00065522|organism=Clytia hemisphaerica|type=CDS|length=735bp|location=Sequence derived from alignment at scaffold_44:332001..341539- (Clytia hemisphaerica)
ATGGTGAAACGTTTCGAGGGTTATAAATACGAGAAACTCTCAATAGCAAC
AGAAGAACAAAATGGAGTTATAGATAAACAACCTAATGGTCAGAATCATA
CAGGTTTAAACTTTAGTCTCGAATCAGTTGATGAACTATTACACGAAAAC
AAAGAAAATAGCAAAGGGTTGTGGAGCAATCTTTTTGATTTTTTAACTTG
TGGTGCGTGCTGTAGAGTGGAGGTTTACTACCCTCGATATGAACATTTTC
AGAACTCAGTGACAAGCAAACAGTATGAAGAATTAAAGAACGCATTCATT
GCGTTTGATCGGAATTGCGATGGATTCATCGATTCTGAAGATCTTGGATA
CGTCATGGGCAAACTTGGTCATGATCTGTCATCTAAAGAAGTCAAAAAGG
TTTTCAAAGATATCTGCAAACACAGTAATGGCAAGATGGATTTCACAGAT
TTCGTAGAAATGATGGCACAAGATAAATTAGTTCTAACCACAAGCGAACA
AGAGATCTTAGCAGCGTTCCAATTTCTTGATCAAAATCATGATGGATATA
TCACCATAGATGAGTTACTACAACGTTTCCATGGCTGCCTGTCCGATACG
GAAGCATCCCGGTTAATGTGTGAAGCGGACGCTAATGGTGACGGAAAGAT
CGATTTCAACGAATTCAAACACATGATGTTTAATCAAGAACGAAGCATCT
CATTGGCTCAATCTGAAGTAGAATTATACTCATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041059XLOC_041059Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
Calmodulin proteinTCONS_00065522-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065522-exon-scaffold_44-1575043694:341210..341539TCONS_00065522-exon-scaffold_44-1575043694:341210..341539Clytia hemisphaericaexon
TCONS_00065522-exon-scaffold_44-1575043694:339734..339763TCONS_00065522-exon-scaffold_44-1575043694:339734..339763Clytia hemisphaericaexon
TCONS_00065522-exon-scaffold_44-1575043694:336068..336095TCONS_00065522-exon-scaffold_44-1575043694:336068..336095Clytia hemisphaericaexon
TCONS_00065522-exon-scaffold_44-1575043694:335692..335835TCONS_00065522-exon-scaffold_44-1575043694:335692..335835Clytia hemisphaericaexon
TCONS_00065522-exon-scaffold_44-1575043694:334195..334431TCONS_00065522-exon-scaffold_44-1575043694:334195..334431Clytia hemisphaericaexon
TCONS_00065522-exon-scaffold_44-1575043694:332001..333804TCONS_00065522-exon-scaffold_44-1575043694:332001..333804Clytia hemisphaericaexon
TCONS_00065522-exon-scaffold_44-1510915933:341210..341539TCONS_00065522-exon-scaffold_44-1510915933:341210..341539Clytia hemisphaericaexon
TCONS_00065522-exon-scaffold_44-1510915933:339734..339763TCONS_00065522-exon-scaffold_44-1510915933:339734..339763Clytia hemisphaericaexon
TCONS_00065522-exon-scaffold_44-1510915933:336068..336095TCONS_00065522-exon-scaffold_44-1510915933:336068..336095Clytia hemisphaericaexon
TCONS_00065522-exon-scaffold_44-1510915933:335692..335835TCONS_00065522-exon-scaffold_44-1510915933:335692..335835Clytia hemisphaericaexon
TCONS_00065522-exon-scaffold_44-1510915933:334195..334431TCONS_00065522-exon-scaffold_44-1510915933:334195..334431Clytia hemisphaericaexon
TCONS_00065522-exon-scaffold_44-1510915933:332001..333804TCONS_00065522-exon-scaffold_44-1510915933:332001..333804Clytia hemisphaericaexon
TCONS_00065522-exon-scaffold_44-1491911889:341210..341539TCONS_00065522-exon-scaffold_44-1491911889:341210..341539Clytia hemisphaericaexon
TCONS_00065522-exon-scaffold_44-1491911889:339734..339763TCONS_00065522-exon-scaffold_44-1491911889:339734..339763Clytia hemisphaericaexon
TCONS_00065522-exon-scaffold_44-1491911889:336068..336095TCONS_00065522-exon-scaffold_44-1491911889:336068..336095Clytia hemisphaericaexon
TCONS_00065522-exon-scaffold_44-1491911889:335692..335835TCONS_00065522-exon-scaffold_44-1491911889:335692..335835Clytia hemisphaericaexon
TCONS_00065522-exon-scaffold_44-1491911889:334195..334431TCONS_00065522-exon-scaffold_44-1491911889:334195..334431Clytia hemisphaericaexon
TCONS_00065522-exon-scaffold_44-1491911889:332001..333804TCONS_00065522-exon-scaffold_44-1491911889:332001..333804Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_44supercontigscaffold_44:332001..341539 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	4.28228	0.363655	4.6856	0.503177	2.08748	0.404947	0.525492	0.295875	0.228977	0.322363	0.370278	0.286443	6.78563	0.608427	3.77318	0.432777	0.223139	0.327569	0.386012	0.585171	0.059013	0.00050911	0.0499641	0.0600873
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
Blast
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BLAST of TCONS_00065522 vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.369e-23
Identity = 53/145 (36.55%), Postives = 88/145 (60.69%), Query Frame = 1 
Query:  361 NSVTSKQYEELKNAFIAFDRNCDGFIDSEDLGYVMGKLGHDLSSKEVKKVFKDICKHSNGKMDFTDFVEMMAQDKLVLTTSEQEILAAFQFLDQNHDGYITIDEL---LQRFHGCLSDTEASRLMCEADANGDGKIDFNEFKHMM 786
            + +T +Q  E K AF  FD++ DG I +++LG VM  LG + +  E++ +  ++    NG +DF +F+ MMA+ K+  T SE+EI  AF+  D++ +GYI+  EL   +      L+D E   ++ EAD +GDG++++ EF  MM
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR-KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
The following BLAST results are available for this feature:
BLAST of TCONS_00065522 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM36.369e-2336.55Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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