TCONS_00065584 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00065584
Unique Name	TCONS_00065584
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2491

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_440:515623..522982+
coding sequence from alignment at scaffold_440:515623..522982+

transcript sequence

>TCONS_00065584 ID=TCONS_00065584|Name=TCONS_00065584|organism=Clytia hemisphaerica|type=transcript|length=2491bp
ttagcctccacctcccgacttcacggtactatTTCTGTGGCATTAATTCA
GATTGTTTGtgagaagaataaaaaaattcacttacTAAACAGCGAGCAAA
CATTCCATTTGTATTCCAACTTGAGTGCCCATGTTGTGTTTCTTCTGCTT
CCATTGCCTTCATAAATCAATTATCCTTATTCTTTTGCTCGATTTGTGTC
CTAAATCTTTAGAATTTTCcgaaaaaacagtgaaaatttgacttattttt
cataatttttcccTCTCAATTCGTGCTTCACACTTCggctgccattttgt
ttgtaaaCTTGACTTTTGTTTTGGAACGCATAATTTATGCGAAAACGCTA
CATACCGGGTGGTACGTAATCACCTTTACATagccaaaaaccaaaatatt
tcaCTTTCGGTTTTGGCTTTCAGTCAACCCGACTGCCGTccatcaaattg
tttttttattctcgAACAAACAATCTCAGCAAAAGTCTTTCGAATCCGAT
TTAGAACCACTCCTTCATCTTCAGAAGTAGGAGATTGTTCAGGATTGTTC
AGGTCTAACATGTCAAGCACCAAGCAAGTCTTGGAAGAGTCAATGAGACA
AAATGCGGACAGAATAGACCAATCTGAAGTGTTATCTTGGAAATCACTTT
TTCTGGCAAAAGCAAAACTAAAAGCATCCAGTAGAACTTCAGGGTTAATG
TCAGGGTTTGCAATGgttGCTATGGTGGAGATTAACCTAGATACTGGAGT
CCCTCAAGGACTTGCCATCTTGTTTAGTTTTACAACTACCATTTTGATTT
CAGTACACGTGTTTGCACTAATGATCTCAACGTGTATTTTACCAAATATC
GAAACAGTCGAATTGATGCATAATAGCGTTTACGTACAGCAGCAGCTTGG
AGACAAAACATTAGCAAGTCATTCACCACATcggaaatttcgaaaatata
tTGAGGTTGCTTGGATATTTAGTACTGGTTTAGGTGCCTTGttattttta
attgaaattcCCATTTTAATGTGGGTGAAATTTTACTATTTGAGTATTTA
TGCTGCATATGTTTCGATGGGAATTATGATACCAGTTTGtgtactttttg
tattttttgcttttaaatttTATCGGAAATTGGTTGAACATAAACAAAGC
AAAAATACGATGCAGTTGGAGGAGTTACAAGTGATGGcaacttatttaaa
aaatgatgaagCTACTGCCATGTTTGATAGTCCGAAAATTGGCGTCCCTT
GATTTCAGGGGGGAATCTTTGTAGAAATTCTGAGAAACTTTTGTGGAGAT
AATGATTACTATGCTCATTATGAACACAATGCTGACAAAATCTACCTGTT
TTTTGTTTAATGATTTAAGATTCTTCTTTGCGGATTTTATTGTTGAATTT
ACGATTTTTTAATGCTTAAAATTAACCCAACATTGAAATAGAGTAGAATT
CACTCCTTTGGGTGAGAGAATCTACACAAGTTACGCGATTACACGTTACG
TTTTGATATCAATTTACAAATgctctaaaaatttgacgcaTTTCAATATT
ATGATTGAAATGTTAATACTATTATTTTAGTTATATCACACTCAAGTCCT
TTTTAAATCAATATTTTGTATACTATGATACTACTACTTATTTAAATTTT
CCTTTTGCTCTTTTTTTCTATACTCTTGGGTTTGTAACATTGTACATTAG
TGATAAAATTTTATAGATTTCTATTTTCCGTTagataacttttgaaaaat
aatttacgAAACATGATTATTGGTTCATtacaacaaatatttttgtaaat
tccaaATATTatattaagattttgaaaaatgttgaaattttatagagatt
tatttagttttaaatttatttacttCAATGTTTATCATTAAGTACGGCTA
AATTTTTAAACTACAGGtattagtagagggcattttttAAAATCGCTTGA
TTGTTttgtcaaagcacttgttatacatttttgtaGGGGTAGGTGAATCA
AAATTACTtaagttccaatttttttcggacactttggtttgattttcgga
caaatatgacggtctcaggcaaagatcatagggtcaaaaattaatgaaat
tttagcttgagaaaacggaggcCTGTTGTATATTtctggaaagctctcaa
aaattaagattagagatatattgcaagtataggtgatttctgtacctata
tcgagatattaacccctcaaaaacagtgtttttcagccagctgttttgtc
cagttttttcgctttttgagttaggtactgaaatcacctatactcgcaat
atatgtCTAATCTTAattgaaatcacctatactcgagcttaggatctgag
gatccaaaagctcaaaaatagtccaatagggctcagaatatagcctggaa
gtctataaacccctcacgaattgaaatactcgaatatcaattagcccaaa
agtgactttctcgcccgaactccaaatttcgaaaaacgaag

Run BLAST on NCBI

protein sequence of TCONS_00065584-protein

>TCONS_00065584-protein ID=TCONS_00065584-protein|Name=TCONS_00065584-protein|organism=Clytia hemisphaerica|type=polypeptide|length=230bp
MSSTKQVLEESMRQNADRIDQSEVLSWKSLFLAKAKLKASSRTSGLMSGF
AMVAMVEINLDTGVPQGLAILFSFTTTILISVHVFALMISTCILPNIETV
ELMHNSVYVQQQLGDKTLASHSPHRKFRKYIEVAWIFSTGLGALLFLIEI
PILMWVKFYYLSIYAAYVSMGIMIPVCVLFVFFAFKFYRKLVEHKQSKNT
MQLEELQVMATYLKNDEATAMFDSPKIGVP

Run BLAST on NCBI

transcript from alignment at scaffold_440:515623..522982+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00065584 ID=TCONS_00065584|Name=TCONS_00065584|organism=Clytia hemisphaerica|type=transcript|length=7360bp|location=Sequence derived from alignment at scaffold_440:515623..522982+ (Clytia hemisphaerica)
ttagcctccacctcccgacttcacggtactatTTCTGTGGCATTAATTCA
GATTGTTTGtgagaagaataaaaaaattcacttacTAAACAGCGAGCAAA
CATTCCATTTGTATTCCAACTTGAGTGCCCATGTTGTGTTTCTTCTGCTT
CCATTGCCTTCATAAATCAATTATCCTTATTCTTTTGCTCGATTTGTGTC
CTAAATCTTTAGAATTTTCcgaaaaaacagtgaaaatttgacttattttt
cataatttttcccTCTCAATTCGTGCTTCACACTTCggctgccattttgt
ttgtaaaCTTGACTTTTGTTTTGGAACGCATAATTTATGCGAAAACGCTA
CATACCGGGTGGTACGTAATCACCTTTACATagccaaaaaccaaaatatt
tcaCTTTCGGTTTTGGCTTTCAGTCAACCCGACTGCCGTccatcaaattg
tttttttattctcgAACAAACAATCTCAGCAAAAGTCTTTCGAATCCGAT
TTAGAACCACTCCTTCATCTTCAGAAGTAGGAGATTGTTCAGGATTGTTC
AGGTCTAACATGTCAAGCACCAAGCAAGTCTTGGAAGAGTCAATGAGACA
AAATGCGGACAGAATAGACCAATCTGAAGTGTTATCTTGGAAATCACTTT
TTCTGGCAAAAGCAAAACTAAAAGCATCCAGTAGAACTTCAGGGTTAATG
TCAGGGTTTGCAATGGTAAGTTCTTTATAATTGTTACAGTTTTCACTATT
GATTATTGATGTtttcaagttttgttttgaaacagtCAGGAGTTTCTGCC
TAATTAAATAGCCAGTATGGATTTTGTGTAactcagtgtagacctaaagc
tctaaagcaggatctaataacatgaaaaccagaatatgattcttcaatgg
gaatcaaaactataaagtgcacttacaaacatcaatttgtcagatctaac
aaaattaataaccgcactgtcatcattgacaataaaacaaacaattttct
gtcaagagccttgtaaacattccaacaactNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcta
tcacagctcagtctaccatttttagcgcggtccgaggattgagccgagaa
cgctccgcgaactcctgcgcgggtgacaaacttcaatctgtcaatcgttt
tctcaagcgaagagtatgcgaagcgattctagctttacgatagtgccgtg
ggtcatcaatggatagtattcaatgatcattatccctttattttcattcc
tagaacttttgcaaaaaaaaggaaaaatagaaaagttgtattttttactg
ctctattcacatactgaatttgaaagatcttctatgtggcttttttttgc
aaacttcaaaaaactgatcttcgtcccgcctttgcgggactttggcttaa
gtgcttgagtgcagcatagggtacaaagtccaaatatgcgtttcccgtaa
tttttgtatgaacagttaggtctatactgtaaCTAACGCTGAAGATCTTC
GGCATACAACTGAAACATTTTGGtgcattggcgtaagggtacttacaaag
attgtttgattttcagttggcgtaaagtaataattccagctcggcgtaaa
tgactccataatccatcgatttttagctttcatttggctaaatttgcttc
cGCTCGCTTACGCTCACGTCAATTTATTAATCATGTtgttggcgcatgcg
cctcttttcccatcttgcacccttattgaaaaattgaatgttggtacaaa
agaaattttgcttggcgtgatGCTTgccagtgtagacctaaagctctaaa
acagcatctaataacatgaaaaccagaatatgattcttcaatgggaatca
aaactataaagtgcacttacaaacNgaaattttgcttggcgtgatGCTTg
ccagtgtagacctaaagctctaaaacagcatctaataacatgaaaaccag
aatatgattcttcaatgggaatcaaaactatactgtaaagtgcacttaca
tcgaaatgatctatcacagctcagtctaccatttttagcgcggtccgagg
attgagccgagaactctcgcagagCGCCCGAGCTCCTGCGTGGCGCGCac
cgcggggatgaaaaacttcaatctgtcaatcattttctcaagcgaagagt
accaAAGCggttctagctttacgatagggccgcggatcatcaatggatag
tattcaattatcattatccctttattttcattcctagaacttttgccaaa
aaaaggaaaaatagaaaagttttattttttactgctctattcacatactg
aatttgaaagatcttctatgtggcgtttttttgcagacttcaaaaaactg
atttttgtcccgcctttgcgggactttggcttaagtgctcgagtgcagca
tagggtacaaagtccaaacatgcgtttcccgtaatttttgtgtgaagagt
taggtctacactgcttgctgtacggaaaaatatcttaagcgcgagatttc
gtggaatccatCATACTGGCTAATTAGGGGAAAGTTTTTTAGGAGAGAAC
CATCCAAACTCATTCAGACAGttaccgtaaatcaccgattaagcgccccg
cttgaattagcgccccgctcgaataagcgccccccatttagttaaaataa
ttttataagcgcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNGTTCTTTATAATTGTTACAGTTTTCACTATTGATTATT
GATGTtttcaagttttgttttgaaacagtCAGGAGTTTCTGCCTAATTAA
ATAATAGCCAGTATGGATTTTGTGTAACTAACGCTGAAGATCTTCGGCAT
ACAACTGAAACATTTTGGCGCATTGGcataagggtacttacaaagattgt
ttgattttcagttggcgtaaagtaataattccagctcggcgtaaatgact
ccataatccatcgatttttagctttcatttggctaaatttgctttcgctc
GCTTATGCTCACGTCAATTTATTAATCATGTTGTTGGCGCATGCGCCTCT
TTTCCCATCTTGCACCCTTATTGAAAAATTGAATGTTGGTACAAAAGAAA
TTTTGCTTGGCGTGATGCTTGCCAGTGTAGACCtaaagctctaaaacagc
atctaataacatgaaaaccagaatatgattcttcaatgggaatcaaaact
ataaagtgcacttacaaacatcaatttgtcagatctaacacaattaataa
ccgcactgtcatcattgacaataaaacaaacgatctTCTGTCAAGAggct
tgtaaacattccaacaacttccatcgaaatgatctatcacagctcagtct
accatttttagcgcggtccgaggattgagccgagaactctcgcagagCGC
CCGAGCTCCTGCGTGGCGCGCaccgcggggatgaaaaacttcaatctgtc
aatcattttctcaagcgaagagtaccaaagcgattctagctttacgatag
ggccgcggatcatcaatggatagtattcaattatcattatccctttattt
tcattcctagaacttttgcaaaaaaaggaaaaatagaaaagttttatttt
ttactgctctattcacataatactgaatttgaaagatcttctatgtggcg
tttttttgcagacttcaaaaaactgatttttgtcccgcctttgcgggact
ttggcttaagtgctcgagtgcagcatagggtacaaagtccaaacatgcgt
ttcccgtaatttttgtgtgaagagttaggtctacactgcttgctgtacgg
aaaaatatcttaagcgcaagatttcgtggaatccatCATACTGGCTAATT
AGGGGAAAGTTTTTTAGGAGAGAACCATCCAAACTCATtcagacagttag
tcacactagggaatcaagctttcagaaaaaacagcatcagtcatctacag
gatgtatttgcaacaacaaggatNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGATAGGctaccatagaatgaacttccttttataggacgAA
Ccctattcatgtggctttcagccactacttttgttgtgaagaagaatatt
agtttttcaaaaaatgaaaattttgttgtttgtgatctGTCTCCACATAG
ATCCATTGCAGAATATATTTTCGGATTaagttttatcttgtttttactGA
AGCTGTCATATGGTCAAAGTTCCAAAAATCCATTTCTTACTCTCATTTCT
CTCGTTTAGAAAgacaaaattttgtttattaTATTTCTTGTAAATAAAGC
AGTTGCAGATCTTGCTATGAAACTATAAAATAGAACTTAGAATTTCTTTA
GTCTACATGATAGACAGCTGCAGACTTTTAGGCTTTACctaagagtagga
gttttatgCTCGAAGCGatggaagatatgacgtagcctaccaTTTCTTAC
TCCCTTCAaactaagaaaatatttttctttttaggttGCTATGGTGGAGA
TTAACCTAGATACTGGAGTCCCTCAAGGACTTGCCATCTTGTTTAGTTTT
ACAACTACCATTTTGATTTCAGTACACGTGTTTGCACTAATGATCTCAAC
GTGTATTTTACCAAATATCGAAACAGTCGAATTGATGCATAATAGCGTTT
ACGTACAGCAGCAGCTTGGAGACAAAACATTAGCAAGTCATTCACCACAT
cggaaatttcgaaaatatatTGAGGTTGCTTGGATATTTAGTACTGGTTT
AGGTGCCTTGttatttttaattgaaattcCCATTTTAATGTGGGTGAAAT
TTTACTATTTGAGTATTTATGCTGCATATGTTTCGATGGGAATTATGATA
CCAGTTTGtgtactttttgtattttttgcttttaaatttTATCGGAAATT
GGTTGAACATAAACAAAGCAAAAATACGATGCAGTTGGAGGAGTTACAAG
TGATGGcaacttatttaaaaaatgatgaagCTACTGCCATGTTTGATAGT
CCGAAAATTGGCGTCCCTTGATTTCAGGGGGGAATCTTTGTAGAAATTCT
GAGAAACTTTTGTGGAGATAATGATTACTATGCTCATTATGAACACAATG
CTGACAAAATCTACCTGTTTTTTGTTTAATGATTTAAGATTCTTCTTTGC
GGATTTTATTGTTGAATTTACGATTTTTTAATGCTTAAAATTAACCCAAC
ATTGAAATAGAGTAGAATTCACTCCTTTGGGTGAGAGAATCTACACAAGT
TACGCGATTACACGTTACGTTTTGATATCAATTTACAAATgctctaaaaa
tttgacgcaTTTCAATATTATGATTGAAATGTTAATACTATTATTTTAGT
TATATCACACTCAAGTCCTTTTTAAATCAATATTTTGTATACTATGATAC
TACTACTTATTTAAATTTTCCTTTTGCTCTTTTTTTCTATACTCTTGGGT
TTGTAACATTGTACATTAGTGATAAAATTTTATAGATTTCTATTTTCCGT
TagataacttttgaaaaataatttacgAAACATGATTATTGGTTCATtac
aacaaatatttttgtaaattccaaATATTatattaagattttgaaaaatg
ttgaaattttatagagatttatttagttttaaatttatttacttCAATGT
TTATCATTAAGTACGGCTAAATTTTTAAACTACAGGtattagtagagggc
attttttAAAATCGCTTGATTGTTttgtcaaagcacttgttatacatttt
tgtaGGGGTAGGTGAATCAAAATTACTtaagttccaatttttttcggaca
ctttggtttgattttcggacaaatatgacggtctcaggcaaagatcatag
ggtcaaaaattaatgaaattttagcttgagaaaacggaggcCTGTTGTAT
ATTtctggaaagctctcaaaaattaagattagagatatattgcaagtata
ggtgatttctgtacctatatcgagatattaacccctcaaaaacagtgttt
ttcagccagctgttttgtccagttttttcgctttttgagttaggtactga
aatcacctatactcgcaatatatgtCTAATCTTAattgaaatcacctata
ctcgagcttaggatctgaggatccaaaagctcaaaaatagtccaataggg
ctcagaatatagcctggaagtctataaacccctcacgaattgaaatactc
gaatatcaattagcccaaaagtgactttctcgcccgaactccaaatttcg
aaaaacgaag

Coding sequence (CDS) from alignment at scaffold_440:515623..522982+

>TCONS_00065584 ID=TCONS_00065584|Name=TCONS_00065584|organism=Clytia hemisphaerica|type=CDS|length=693bp|location=Sequence derived from alignment at scaffold_440:515623..522982+ (Clytia hemisphaerica)
ATGTCAAGCACCAAGCAAGTCTTGGAAGAGTCAATGAGACAAAATGCGGA
CAGAATAGACCAATCTGAAGTGTTATCTTGGAAATCACTTTTTCTGGCAA
AAGCAAAACTAAAAGCATCCAGTAGAACTTCAGGGTTAATGTCAGGGTTT
GCAATGgttGCTATGGTGGAGATTAACCTAGATACTGGAGTCCCTCAAGG
ACTTGCCATCTTGTTTAGTTTTACAACTACCATTTTGATTTCAGTACACG
TGTTTGCACTAATGATCTCAACGTGTATTTTACCAAATATCGAAACAGTC
GAATTGATGCATAATAGCGTTTACGTACAGCAGCAGCTTGGAGACAAAAC
ATTAGCAAGTCATTCACCACATcggaaatttcgaaaatatatTGAGGTTG
CTTGGATATTTAGTACTGGTTTAGGTGCCTTGttatttttaattgaaatt
cCCATTTTAATGTGGGTGAAATTTTACTATTTGAGTATTTATGCTGCATA
TGTTTCGATGGGAATTATGATACCAGTTTGtgtactttttgtattttttg
cttttaaatttTATCGGAAATTGGTTGAACATAAACAAAGCAAAAATACG
ATGCAGTTGGAGGAGTTACAAGTGATGGcaacttatttaaaaaatgatga
agCTACTGCCATGTTTGATAGTCCGAAAATTGGCGTCCCTTGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_041094	XLOC_041094	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00065584-protein	TCONS_00065584-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00065584-exon-scaffold_440-1491911889:515623..516337	TCONS_00065584-exon-scaffold_440-1491911889:515623..516337	Clytia hemisphaerica	exon
TCONS_00065584-exon-scaffold_440-1510915933:515623..516337	TCONS_00065584-exon-scaffold_440-1510915933:515623..516337	Clytia hemisphaerica	exon
TCONS_00065584-exon-scaffold_440-1575043694:515623..516337	TCONS_00065584-exon-scaffold_440-1575043694:515623..516337	Clytia hemisphaerica	exon
TCONS_00065584-exon-scaffold_440-1491911889:521207..522982	TCONS_00065584-exon-scaffold_440-1491911889:521207..522982	Clytia hemisphaerica	exon
TCONS_00065584-exon-scaffold_440-1510915933:521207..522982	TCONS_00065584-exon-scaffold_440-1510915933:521207..522982	Clytia hemisphaerica	exon
TCONS_00065584-exon-scaffold_440-1575043694:521207..522982	TCONS_00065584-exon-scaffold_440-1575043694:521207..522982	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_440	supercontig	scaffold_440:515623..522982 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.6249	2.33059	4.66883	4.75938	1.46271	0.898967	1.45456	1.32486	2.83845	2.7985	2.82867	3.12594	2.90486	3.54059	4.59303	3.24089	4.00778	3.86077	4.22057	3.14788	5.05428	5.09974	4.22955	5.07146	3.16435	3.69684	4.31753	3.11046	7.37583	4.89892

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR012446	CRAC_channel

Blast

[Close]

BLAST of TCONS_00065584 vs. Swiss-Prot (Human)
Match: ORAI2 (Protein orai-2 OS=Homo sapiens GN=ORAI2 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.038e-41
Identity = 87/194 (44.85%), Postives = 113/194 (58.25%), Query Frame = 2

Query:  683 RTSGLMSGFAMVAMVEINLDTGV--PQGLAILFSFTTTILISVHVFALMISTCILPNIETVELMHNSVYVQQQLGDKTLASHSPHRKFRKYIEVAWIFSTGLGALLFLIEIPILMWVKFY----------------YLSIYAAYVSMGIMIPVCVLFVFFAFKFYRKLVEHKQSKNTMQLEELQVMATYLKNDE 1210
            RTS L+SGFAMVAMVE+ L+T    P+ L I FS  TT+L++VH+FAL+ISTCILPN+E V  +HN   +          S SPH +   YIE+AW FST LG LLFL E+ +L W+KF                 +    AA VS  IM+PV ++FV F   FYR LV HK  ++  ++EEL  +   L   E
Sbjct:   65 RTSALLSGFAMVAMVEVQLETQYQYPRPLLIAFSACTTVLVAVHLFALLISTCILPNVEAVSNIHNLNSI----------SESPHERMHPYIELAWGFSTVLGILLFLAEVVLLCWIKFLPVDARRQPGPPPGPGSHTGWQAALVSTIIMVPVGLIFVVFTIHFYRSLVRHKTERHNREIEELHKLKVQLDGHE 248

The following BLAST results are available for this feature:

BLAST of TCONS_00065584 vs. Swiss-Prot (Human)

BLAST of TCONS_00065584 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ORAI2	3.038e-41	44.85	Protein orai-2 OS=Homo sapiens GN=ORAI2 PE=1 SV=1	[more]

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TCONS_00065584 (transcript) - C. hemisphaerica